Preliminary indications of climate-induced change in a warm-temperate South African estuarine fish community

The fishes of the warm-temperate East Kleinemonde Estuary (South Africa) have been sampled bi-annually, in summer and winter, using seine and gillnets since December 1995 and a total of 19 families, represented by 38 species were recorded between December 1995 and July 2006. Indicative of a warming trend, six new species of tropical fishes ( Valamugil cunnesius, Valamugil robustus, Liza alata, Liza macrolepis, Glossogobius giuris and Terapon jarbua ) were recorded in the catches from 1999 onwards, with V. cunnesius and L. macrolepis recorded in catches almost every year after 2002. Mean annual sea-surface temperatures recorded along the adjacent coast have been increasing during the past decade and this may have facilitated the southward extension of tropical marine fishes into the warm-temperate biogeographic zone.     

Biochemical polymorphisms in South African freshwater fish. Isoenzyme patterns in fish of the families Cyprinidae and Salmonidae

Isoenzyme patterns were studied in local populations of the carp ( Cyprinus carpio ) and the bream ( Sarotherodon mossambicus ) of the Cyprinid family. and in the trout ( Sabno giardneri ) of the family Salmonidae. Homogenates of heart muscle extracts were used in the identification of PGI. NADP-IDH. PGM and 6-PGD.
Polymorphisms found and gene frequencies obtained are discussed separately for each enzyme and species or population.
In the bream, variation was found only at the PGI locus. In the carp only the PGM locus was polymorphic whereas both PGM and IDH showed variation in the trout. The variation at the PGM locus in the trout cannot support the three locus model suggested elsewhere and clearly indicates a single locus for the mo-nomeric enzyme.
The large variety of NADP-IDH types in trout not only illucidates the complexity of this locus but confirms a disomic mode of inheritance. Genetic differences in the trout populations could be related to possible advantages for management purposes.     

River flow and fish abundance in a South African estuary

The ichthyofauna of the Thukela Estuary, a small (55 ha), shallow (<1·5 m) system on the KwaZulu-Natal coast (mean annual river runoff of 3865 × 10⁶ m³, from a large catchment of 29 000 km², is seasonal: peak inputs occurring between November and March), was dominated by the juveniles of marine taxa that used the estuary as a nursery area. A striking feature of the above community was the decline in fish abundance with increasing river input, with flow values >100 m³ s⁻¹ leading to increased loss of species from the system. This decline was linked to the lack of saline intrusion into the estuary and increased freshwater flooding through the system.     

Tidal amplitude and fish abundance in the mouth region of a small estuary

Using an acoustic underwater camera (Dual Frequency IDentification SONar, DIDSON), the abundance and direction of movement of fishes > 80 mm total length (L_T) in the mouth of a small South African estuary during spring and neap tidal cycles were observed. While the sizes of fishes recorded were consistent across both tide cycles, the number of fishes passing the camera was significantly greater during the smaller neap tides. Schooling behaviour was more pronounced for fishes that were travelling into the estuary compared to fishes swimming towards the ocean.     

Geographical and typological changes in fish guilds of South African estuaries

A comparative analysis of fish estuary association guilds was undertaken on some 190 South African estuaries. This pioneering study spanned three zoogeographic regions and included three broad estuarine types. The guild compositions of the estuaries were compared based on an importance value, incorporating taxonomic composition, numerical abundance and relative biomass. Multivariate analyses included both inter‐regional (zoogeographic) and intra‐regional (estuarine typology) comparisons. The major estuary‐associated guilds (estuarine species and marine migrant species) were important in all estuary types within all biogeographic regions. Significant differences both between regions and between estuary types within regions, however, were recorded. Cool–temperate estuaries were generally dominated by migratory species (estuarine migrants and marine migrant opportunists) while the importance of species dependent on estuaries (estuarine residents and estuarine‐dependent marine migrants) was higher in warm–temperate and subtropical regions. The significance of estuarine nursery areas, particularly in regions where estuaries are few in number, is highlighted. In terms of typology, migratory species assumed a greater importance in predominantly open systems, while freshwater and estuarine‐resident species were more important in predominantly closed systems. Predominantly closed estuaries, however, were also important for marine migrant species, which further highlights the significance of these systems as nursery areas for fishes.     

Ichthyofaunal assemblages in estuaries: A South African case study

This review places the life-history styles of fishes associated with South African estuaries in a global context and presents a classification system incorporating all the major life-history categories for estuary-associated fish species around the world. In addition, it documents the early life histories of the major fish groups in South African estuaries, with particular emphasis on the differing modes of estuarine utilization by marine, estuarine and freshwater taxa.This review details factors influencing the ichthyofaunal community structure in South African estuaries. The availability of fish for recruitment into an estuary depends primarily upon the distributional range of euryhaline marine and estuarine species, with tropical and temperate taxa showing marked abundance trends. Within a particular biogeographic region, however, estuarine type and prevailing salinity regime have a major influence on the detailed ichthyofaunal structure that develops. There is an increasing preponderance of marine fish taxa when moving from a freshwater-dominated towards a seawater-dominated type of system, and a decline in species diversity between subtropical estuaries in the north-east and cool temperate systems in the south-west. Similar declines in fish species diversity between tropical and temperate estuaries in other parts of the world are highlighted.Fish assemblages in estuaries adjust constantly in response to changing seasons, salinities, turbidities, etc. Despite persistent fluctuations in both the biotic and abiotic environment, the basic ichthyofaunal structure appears to have an underlying stability and to be predictable in terms of the response of individual species to specific conditions. This stability seems to be governed by factors such as the dominance of eurytopic taxa within estuarine assemblages and the robust nature of food webs within these systems. The predictability arises from factors such as the seasonality associated with estuarine spawning cycles and juvenile fish recruitment patterns. These patterns, together with a well-documented resilience to a wide range of physico-chemical and biotic perturbations, appear to be an underlying feature of fish assemblages in estuaries around the world.In contrast to marine fish species, estuary-associated taxa have received little conservation attention. Apart from the designation of protected areas, the main direct means of conserving estuary-associated fish stocks include habitat conservation and controls over fishing methods, effort, efficiency and seasonality. Of these, the conservation of fish habitats, the most important, because healthy aquatic environments invariably support healthy fish populations. The use of estuarine sanctuaries for fish conservation is briefly reviewed, as well as the legislation governing the USA National Estuarine Research Reserve System (NERRS) and the Australian Marine and Estuarine Protected Area (MEPA) system. It is concluded that South Africa requires an expansion of the existing Estuarine Protected Area (EPA) network, as well as the upgrading of selected 'estuarine reserves' where fishing is permitted, into 'estuarine sanctuaries' where no exploitation of biological resources is allowed.     

Volatile constituents and antimicrobial activities of nine South African liverwort species

The volatile constituents of nine liverworts species (Asterella marginata, Dumortiera hirsuta, Fossombronia swaziensis, Marchantia pappeana, Marchantia polymorpha subsp. ruderalis, Pallavicinia lyellii, Plagiochasma rupestre, Riccia albolimbata and Symphyogyna podophylla) from South Africa were determined by gas chromatography. Where possible the volatile constituents identified were compared to those reported for the same species from other countries. Among the analysed liverworts, the chemical compositions of A. marginata, F. swaziensis, M. pappeana, and R. albolimbata are reported for the first time. Each of the analysed liverwort species produced its own characteristic components. Thujopsanes, chamigranes and cuparanes were found to be the most characteristic components of M. polymorpha subsp. ruderalis. The presence of dumortane-type sesquiterpenoids in D. hirsuta indicated that this species is similar in chemistry to an Argentinean sample. This is one of only a handful of reports on the presence of this sesquiterpene-type in liverworts. Simple thallose liverworts, S. podophylla and P. lyellii, were characterized by the presence of labdane-type diterpenoids. In addition, the antimicrobial activities of chloroform:methanol (1:1) extracts of the liverworts were evaluated against several important human pathogens using the serial dilution assay. Four of the liverwort species were active against Pseudomonas aeruginosa with MIC values ranging from 0.50 to 1.0 mg/mL. Some activity (MIC value of 1.0 mg/mL) was also recorded for the crude extracts of P. lyellii and M. pappeana against Escherichia coli. The extract of S. podophylla displayed the best activity towards the yeast Cryptococcus neoformans (MIC = 1.0 mg/mL). Although approximately 300 liverwort species occur in southern Africa, a Scopus search confirmed that this is the first report of the volatile profiles and biological properties of species from the region.     

South African Museums and the Creation of a New National Identity

Museums are important sites of national cultural production, collective memory making, and the construction of national narratives. Contemporary South Africa is a particularly interesting place to study these processes. With the demise of apartheid, South Africa faces the difficult challenge of creating a new national identity that incorporates an examination of past oppression yet leaves the way open for building a national identity that incorporates all its diverse groups. The museums reviewed below, the Robben Island Prison Museum, the District Six Museum in Capetown, and the Kwa Muhle local history museum in Durban all make important contributions to this process.     

The role of salinity in structuring the fish assemblages in a tropical estuary

The present study describes the seasonal changes of the fish species composition in three areas of the main channel of the Caeté River estuary, Brazil. The fish faunas of each habitat differed in density, biomass and species composition. Mean fish density and biomass for the Caeté River estuary channel was 0·25 individuals m⁻² and 0·9 g m⁻² respectively. Analysis of catch data showed that the number of species, total density and total biomass differed significantly between areas and seasons. For the most important species, the mean density of Cathorops spixii, Aspredinichthys filamentosus, Aspredo sp. 2, Pimelodus blochii, Pseudauchnipterus nodosus and Macrodon ancylodon , differed significantly between seasons while the mean density of Stellifer rastrifer , Stellifer microps, Aspredo aspredo , Aspredo sp. 1 and Cynoscion acoupa did not. The mean biomass of these species, with exception of S. microps and Aspredo sp. 1, also differed significantly between seasons. In the Caeté estuary seasonal salinity fluctuations appeared to be the main factor that structured the fish assemblage in the entire estuarine system. At least 85% of the species captured by the artisanal and subsistence fisheries in the Bragantine region required estuarine conditions to complete their life cycle.     

Rainfall and topo-edaphic influences on woody community phenology in South African savannas

Woody community phenology was studied in the central lowveld, South Africa, over a twelve month period at three sites along a rainfall gradient, with both toplands and bottomlands sampled at each site. Each month, individual plants, in replicated samples, were scored into a number of categories describing their phenological state. Position on the rainfall gradient influenced: (1) onset and magnitude of leaf emergence, (2) onset and duration of mature leaves, and (3) the proportion of leafless trees. Generally, the moist site demonstrated earlier leaf growth than the intermediate or arid sites. Emergent and mature leaves were recorded earlier, and in the case of mature leaves, retained longer. Overall, there was a lower proportion of leafless trees during the dry season at the moist site, followed by the semi-arid site, followed by the arid site. Differences with respect to catenal position were evident for the proportion of trees in winter with mature leaves, and the proportion of trees with senescent leaves. Bottomlands had a greater proportion of trees with leaves during winter, but a lower proportion of trees recorded with senescent leaves. Both of these findings were a result of the greater proportion of evergreen species in bottomlands, as well as increased leaf retention by the deciduous species. Phenological activity of leaves was related to plant stem size. In particular, there was greater leaf retention during the dry period by small stems, relative to large stems.     

South African populations of Littorina rudis

Littorina rudis was collected from stands of Spartina capensis in saltmarsh habitats within Langebaan and knysna lagoon, Cape Province. It was absent from rocky sores and from saltmarshes east of Knysna. The shell, radular and penial morphology are described. L. rudis from both localities bore tessellated colour patterns similar to those of British saltmarsh ecotypes. The Knysna population contained individuals with a unique amber background colour. The shells from Knysna and Langebaan were very thin in accordance with the sheltered habitats. The number of embryos carried in the brood puch was similar in both countries. Sexual maturity was attained at about 4 mm shell length; the male and female modal sizes were 4.9 mm and 5.1 mm respectively at Langebaan. No. published records were found for L. rudis in South West Africa. Some possible origins of the South African L. rudis populations are discussed.     

Effects of altered estuarine submerged macrophyte bed cover on the omnivorous Cape stumpnose Rhabdosargus holubi

The ecological importance of submerged macrophyte beds to fishes within estuaries was investigated through the example of the ubiquitous Cape stumpnose Rhabdosargus holubi, an omnivorous, vegetation and estuary-dependent species, using stable-isotope techniques and long-term abundance (catch-per-unit-effort) data from the East Kleinemonde Estuary, South Africa. Outputs from a Bayesian mixing model using δ(13) C and δ(15) N signatures indicated that the submerged macrophytes Ruppia cirrhosa and Potamogeton pectinatus were not a primary source of nutrition for R. holubi, confirming previous work that revealed that macrophytes are consumed but not digested. Long-term seine netting data showed reduced abundance of R. holubi during a prolonged period of macrophyte senescence, suggesting that submerged macrophyte habitats provide shelter that reduces mortality (predation risk) and a food-rich foraging area.     

Effects of oil/gas field produced water on the macrobenthic community in a small gradient estuary

Little is known about how climatic events (i.e., drought) inhibit or enhance movement of petroleum hydrocarbon laden sediments in estuarine systems and how this in turn effects the macrobenthic populations exposed to these sediments. Seventeen collection stations were established and monitored at New Bayou, Texas, a small gradient estuary which receives petroleum products via oil/gas field produced water discharge. Hydrographic, geologic and biotic samples were taken monthly from each station during a period of reduced rainfall. Both temperature and dissolved oxygen data taken during the study followed patterns typical for the area. Salinity values increased into the polyhaline range at near-bay stations during the reduced rain period, while upper bayou stations remained within the oligohaline range. Sediment grain sizes along the bayou were generally in the silty-clay range. Sediment hydrocarbon concentrations were highest (11.4 mg g⁻¹ dry sediment) around the produced water discharge site and lowest at near-bay stations (0.2 mg g⁻¹ dry sediment). Ninety-six macrobenthic species were collected during the study. General effects from produced water discharge on macrobenthic populations followed the classical pattern outlined by other research in shallow bay systems. A sediment hydrocarbon concentration of 2.5 mg g⁻¹ dry sediment was found to reflect the average value needed to depress population abundances. Both abundance and diversity values were lowest at central stations near the discharge site. This zone of depressed macrobenthic populations extended from the discharge site at least 107 m downstream and 46 m upstream. The zone of stimulated macrobenthic populations occurred 1486 m downstream and 381 m upstream from the discharge site.     

Feeding patterns of the dominant benthic and demersal fish community in a temperate estuary

The diet and feeding relationships of the 12 most abundant benthic and demersal fish species of the Mondego Estuary, Portugal, were studied between June 2003 and May 2006. Fishes were caught during the night using a 2 m beam trawl. The stomach contents were analysed for prey identification, counting and weighing. According to prey importance in diets, three main feeding guilds were identified: (1) invertebrate feeders, (2) invertebrate and fish feeders and (3) plankton and invertebrate feeders. Besides these main feeding guilds, some fishes also presented fractions of algae and zooplankton in their stomach contents. The most abundant prey items were macroinvertebrates, with several polychaetes ( Nephtys spp., Capitellidae, Spionidae and Eunicidae), Corophium spp. and Crangon crangon among the dominant prey. Pomatoschistus spp. were the most preyed on fishes. Several fish species showed a tendency for a specialized diet, but almost all also showed some degree of opportunistic feeding by preying on other food resources. High diet overlap was found between some fish species, yet exploitative competition could not be concluded.     

The Influence of Selected Environmental Variables on Fish Assemblage Structure in a Range of Southeast African Estuaries

This study compared the ichthyofaunal assemblages in 10 Eastern Cape Province, South Africa, estuaries to identify whether there were any structural variations between the assemblages and to determine the environmental and physical factors linked to these variations. Species belonging to both the marine migrant and estuarine resident groups, by consistent representation within each estuary grouping, were responsible for the separation of fish assemblage structures between the different types of systems. The data further revealed that fish assemblages in the three main types of estuaries investigated were distinct, linked primarily to estuary mouth status and estuary size.     

Problems of estimating population parameters and production of fish in a tropical rain forest stream,North Venezuela

The River Todasana is a small rain tropical forest stream emptying to the Caribbean Sea (Venezuela). Fish were sampled by electrofishing at three contiguous sites (pool, riffle, raceway). Nine species were recorded. Their mean biomass and production were: 43.72 kg ha⁻¹ and 36.94 kg ha⁻¹ yr⁻¹, maximum: 55.47 kg ha⁻¹ and 42.33 kg ha⁻¹ yr⁻¹, respectively.     

Taxonomic patterns of bleaching within a South African coral assemblage

In 1998, the Indian Ocean coral reefs suffered a severe and extensive mass bleaching event. The thermal tolerances of corals were exceeded and their photosynthetic symbionts (zooxanthellae) lost. Mortalities of up to 90% were recorded on the reefs of Seychelles, Maldives, Kenya and Tanzania. South African coral reefs were among the few that largely escaped the 1998 mass bleaching event, but may be threatened in the future if global warming increases. This study assessed the extent of coral bleaching and partial recovery at Sodwana Bay, South Africa during 2000 and 2001. Bleaching levels in this study varied over the course of a year, which suggested that seasonally varying parameters such as sea temperature were the most likely cause of bleaching. Bleaching levels were highest at the shallowest site. However, these bleaching levels were very low in comparison with those of reefs elsewhere in the Indian Ocean. The greater volume of water over the relatively deeper reefs of Sodwana Bay may have protected the reefs from severe bleaching. Field measurements on the three reefs indicated that, although the reefs at Sodwana Bay are still healthy, bleaching increased from <1% in 1998 to 5–10% in 2002. Bleaching occurred in 26 coral genera. The Alcyonacea were highly susceptible to bleaching, especially Sarcophyton sp. Among the hard corals, Montipora spp. were the species most susceptible to bleaching. The sensitivity of these genera to early and slight increases in temperature suggests that they can forewarn of a possible greater bleaching event. In contrast, the coral genera Turbinaria and Stylophora were most resistant to bleaching.     

Diversity and abundance of insect visitors to flowers of trees and shrubs in a South African savannah

This study presents the results of a landscape‐scale survey for insect floral visitors in the Skukuza Ranger District, Kruger National Park, South Africa. Floral visitors were sampled from flowering trees and shrubs along linear transects spanning the entire district. Six plant species were sampled in the late dry season (Acacia grandicornuta Gerstner, A. nigrescens Oliver, Cassia abbreviata Oliver, Combretum hereroense Schinz, Combretum zeyheri Sonder, Euclea divonorum Hiern), and eleven plant species were sampled during the rainy season (Acacia exuvialis Verdcourt, A. grandicornuta Gerstner, A. nilotica (L.) Willdenow, A. tortilis (Forsskal) Hayne, Dichrostachys cinerea Miquel, Flueggea virosa (Roxburgh) Baillon, Grewia bicolor Jussieu, G. flava De Candolle, G. flavescens Jussieu, G. monticola Sonder, and Peltophorum africanum Sonder). Coleoptera, Hymenoptera and Lepidoptera comprised the majority of floral visitors, while species of Blattodea, Diptera, Hemiptera and Neuroptera also occurred on flowers. Known or likely pollinators include bees (Hymenoptera: Apidae, Halictidae and Megachilidae) and scarab beetles (Coleoptera: Scarabaeidae). These plant species appear to have generalist pollination systems, with the exception of species of Grewia L., which appear to be pollinated primarily by bees. A provisional plant–pollinator food web is presented for the eleven species of trees and shrubs which flower during the rainy season.     

Fire and the chemistry of a South African mountain stream

The effects of a late-summer prescribed burn on the chemistry of a second-order mountain stream in the south-western Cape, South Africa, were investigated. Nitrate concentrations in stream water were significantly higher during the winter of the post-burn year. Increased concentrations of chloride, bicarbonate, polyphenols and potassium and decreased sodium concentrations were also recorded. Concentrations of ammonium, phosphate, calcium, magnesium, total dissolved solids and hydrogen ions were not significantly affected by the burn. Ionic export from the catchment was generally greater in the post-burn year. Apart from nitrate, however, values probably lie within the natural range of year-to-year variation. It is predicted that enhanced losses of nitrate will decrease progressively with the recovery of the vegetation and the re-establishment of soil/plant nutrient cycles. Atmospheric losses of nutrients in smoke were unquantified, but may be of more significance to site productivity than losses through surface runoff, which, in the case of nitrogen, appear to be compensated by precipitation inputs.