基于粪便DNA的东北马鹿遗传多样性

东北马鹿(Cervus canadensis xanthopygus)为国家二级重点保护野生动物,近些年其种群数量急剧下降、分布区不断退缩、种群基因交流受阻,很多地区更是难觅其踪迹。亟需对其种群的遗传变化,特别是遗传多样性和近交衰退等种群遗传信息开展进一步评价,增强保护与管理的针对性。本研究在大、小兴安岭和长白山脉的6个重点研究区域,共收集409份疑似马鹿粪便样本。首先基于mtDNA Cyt b基因测序技术进行物种鉴定,并对鉴定为马鹿的阳性样本利用微卫星技术进行个体识别。结果共识别出172只东北马鹿个体;Cyt b基因序列共检测出14个变异位点和11个单倍型,单倍型多样性为0.849 (0.105～0.732),核苷酸多样性为0.678%(0.099%～0.775%)。10个微卫星位点检测出种群平均等位基因数为5.7 (5.2～7.2),有效等位基因数为3.3 (2.5～4.1),观测杂合度为0.687 (0.644～0.725),期望杂合度为0.619 (0.564～0.689),近交系数为-0.113 (-0.160～-0.037)。结果表明,东北马鹿种群遗传多样性处于中等水平,其...     

炔雌醚对长爪沙鼠种群数量和性比的影响

炔雌醚是一种激素类新型鼠类不育剂,已有研究表明,炔雌醚对某些鼠类种群繁殖具有良好的控制成效。为检验新型不育剂对长爪沙鼠种群的控制效果,2006年5月在内蒙古锡林郭勒盟锡林浩特市农牧交错带开展了炔雌醚对野外长爪沙鼠种群的控制实验,本次实验设投药区和对照区2个组别,5—8月开展逐月的夹线调查以及四分之一圆洞口计数法,对样地内长爪沙鼠进行系统的追踪调查,分析炔雌醚对长爪沙鼠种群数量以及种群性比的作用。结果显示:投药1个月之后,投药区雌鼠比例(16.3%)不及对照组雌鼠比例(51.9%)的三分之一,投药区的雌鼠比例(16.3%)仅为雄鼠比例(83.7%)的五分之一;与对照区相比,投药区长爪沙鼠的密度下降达60%以上。这表明:炔雌醚对野外长爪沙鼠种群的不育控制具有良好效果,且炔雌醚对长爪沙鼠的种群性比影响很大,过量投放炔雌醚可造成雌鼠死亡,单独使用炔雌醚可降低野外不育剂的药物成本。     

小兴安岭马鹿粪便的分解速率

粪便分解速率是粪便堆在自然条件下消失所用的时间,利用粪便距离取样法估算鹿科动物种群数量,是种群数量管理研究的重要基础。为揭示高纬度温带大陆性气候条件下的鹿科动物粪便分解速率,解决在我国普遍存在的目标种相对隐蔽、种群密度低、粪便分散导致的原地回访观测耗时耗力难以完成的问题,本研究在温带大陆性气候的小兴安岭范围内,选择铁力林业局建设林场为研究区,于2015年1月收集38堆马鹿(Cervus elaphus)的新鲜粪便,将这些粪便堆集中移至方便回访的一处马鹿代表性生境——阳坡针阔混交林,记录每堆粪便的原始粪粒数,之后间隔一定时间进行回访并记录每堆粪便剩余的粪粒数和各粪便堆是否分解完全,共回访8次。利用R 4.1. 2中的逻辑斯蒂回归得出回归方程的截距b0和斜率b1,再利用MATLAB R2020b计算粪便分解速率。结果表明,马鹿粪便的平均分解速率为(646±53) d。本研究将粪便人工移动集中放置于一处进行观测实验,为研究低种群密度的动物粪便分解速率提供了可行途径,丰富了我国鹿科动物粪便分解速率研究,从而减小了利用粪便距离取样法估算种群数量的阻碍。     

用粪便形态特征初步研究新疆塔里木马鹿种群年龄和性别

塔里木马鹿分布在干旱地区,是唯一的适应干旱荒漠环境的特殊马鹿亚种之一.目前,塔里木马鹿种群面临着栖息地退缩和片段化的双重影响,这不仅导致了种群数量的锐减,而且也因物种遗传漂变和近亲繁殖的不断增加,进一步加剧其濒危程度.为了有效地保护该物种,全面了解种群结构是至关重要.对塔里木马鹿粪便的长度、宽度、长度/宽度比例和体积等参数进行了测量,并采用判别分析方法划分种群年龄.结果表明,塔里木马鹿粪便形态在不同性别之间有差异,一般雌性的粪便大于雄性(P<0.05).同时根据粪便形态对种群年龄划分为成年雄性、成年雌性和幼体等3个年龄组.     

三种方法对天山马鹿喀拉乌成山种群数量的比较

为了获得天山马鹿Cervuselaphus songaricus喀拉乌成山种群数量,并评估不同种群数量统计方法之间的差异。2010～2012年利用样线法、粪堆计数法以及非损伤性标记重捕法对喀拉乌成山的天山马鹿种群数量进行研究,发现样线法估计的种群数量最低,仅为1.316～1.656头/km2;而非损伤性标记重捕法获得的种群数量最高,为2.075～3.11头/km2;粪堆计数法获得的数据居中,为1.422～2.844头/km2,说明不同的方法之间很难具有可比性。     

基于粪便DNA的雪豹种群调查和遗传多样性

雪豹 (Panthera uncia) 是仅分布于亚洲高海拔山区的珍稀濒危猫科动物.本研究在印度西南部(Ladakh)、中国青海和蒙古国的南部(南Gobi)3个独立的雪豹分布区共采集109份粪便样品.应用线粒体DNA(mtDNA) cyt b基因特异性引物对109份粪便样品进行鉴定,发现有31份粪便来自雪豹,其中印度Ladakh、我国青海和蒙古国南Gobi的雪豹样品分别为17份、3份和11份.利用重新筛选设计的7对家猫(Felis catus)微卫星引物,对雪豹粪便样品进行了基因分型分析,结果发现在Ladakh和南Gobi检测到的雪豹粪便样品分别来自4只和5只不同的雪豹个体,而青海的样品则来自同一只雪豹;遗传多样性统计分析表明,蒙古国南Gobi的雪豹微卫星遗传多样性水平低于印度的Ladakh.研究结果表明了粪便DNA在雪豹种群监测和遗传多样性研究中的可行性.     

植物种群的性比

总结了植物种群性比的最新研究成果,阐明了自然界植物不同性别的个体间的差异、影响植物种群性比的因素和有关种群性比变化的机理,论述了种群性比变化研究的理论和实践意义.     

高原鼠兔种群的性比

The sex ratio (♂ / ♀ ) of plateau pika's (Ochotona curzoniae) population was studied by re-captured method in the region of the Haibei Mpine Meadow Ecosystem Research Station, Northwest Institute of Plateau Biology, the Chinese Academy of Sciences from April of 2001 to August of 2002. The result showed that there was no significant difference from 1:1 in adult's sex ratio in whole breeding season, whereas the sex ratio of juvenile had some fluctuations among different age stages. The sex ratio of the second litter varied significantly from embryo to 60-day-old, but no difference at the first and the third litter. We concluded it was caused by conflict between maternal strategy and juvenile's strategy. No significant differences of sex ratio were found both in adult and juvenile between 2001 and 2002. The sex ratio of plateau pika before and after overwintering did not vary. In summary,we proposed that sex ratio of plateau pika's population was not influenced by exogenous factors, but some serf-regulation mechanisms may be involved.     

粪便微卫星DNA在种群大小评估中的应用及若干问题的探讨

对于易受伤害或濒危物种的有效管理需要准确评估种群大小.传统的调查方法是直接计数和无线电跟踪,这些方法对于偏僻地区的珍稀动物来说是困难和低效率的.非损伤性DNA技术作为一种个体识别的工具打开了种群调查的新方法.本文以粪便微卫星技术为例,概述了其在种群大小评估中的应用,并且就如何获得准确种群大小的各个实验相关步骤加以讨论.     

大熊猫DNA指纹在野生种群数量调查中的应用

本文用荧光素标记ＬＺＦ－１基因指纹探针,以四川省冕宁县冶勒野外大熊猫的脱落被毛及尽量新鲜的粪便作样品,进行了ＤＮＡ指纹检测。１．在相同或不同时间、巢域采集的粪便与被毛样品,显现出相同或不同的ＤＮＡ指纹图谱,达到个体认定的目的．表明了大熊猫野外脱落被毛和粪便,能作为ＤＮＡ指纹分析材料,进行野生种群数量调查．２．根据检测６个被毛和９个粪便样品的结果,认定该生境中有７只大熊猫个体,纠正了有８只和８±２只的记载．３．应用ＤＮＡ指纹技术及微机个体识别进行大熊猫野外数量调查,准确可靠,节省人力、物力和财力,能获得大熊猫在野外的真实个体数量。     

基于生境可获得性的完达山地区马鹿(Cervus elaphus xanthopygus)冬季生境选择

于2004～2005年冬季研究了完达山地区马鹿的生境利用和选择。在野外调查的基础上,获取了研究地区马鹿种群水平上的生境利用数据;利用地理信息系统和遥感技术,从区域尺度上测度了各类生境因子的可获得性。通过比较被利用生境与可获得生境,测度了马鹿冬季对各类生境或生态因子的选择。结果表明,马鹿对植被类型、海拔、坡向、NDVI等级、到公路距离表现出非比例利用,对坡度的利用与其可获得性则没有显著性差异。马鹿选择采伐迹地,低郁闭度生境（第2、3NDVI等级）,200～300m海拔区间,南坡,距离公路600～700m的区间。马鹿采食生境和卧息生境对各类因子具有不同的选择性,表现出不同功能生境分离的特征。对于采食生境,马鹿选择采伐迹地、阔叶疏林,低郁闭度（第2、3NDVI等级）,南坡;对于卧息生境,马鹿仅选择采伐迹地,低郁闭度（第2、3、4NDVI等级）。根据马鹿活动样点的出现与否,建立了马鹿冬季生境选择的逻辑斯谛回归模型。模型回判结果表明,该模型对马鹿活动样方与对照样方的总体正确预测率为74．4％,对马鹿活动样方的正确预测率为84．2％,对对照样方的正确预测率为62．4％,能够较好的预测生境利用概率。     

黑龙江省完达山东部林区马鹿种群遗传多样性的微卫星分析

黑龙江省完达山东部林区是东北马鹿(Cervus elaphus xanthopygus)种群密度较高的分布区之一,本文对2年冬季采集的167份马鹿粪便进行了7个微卫星座位的个体识别,评价了马鹿种群遗传多样性,并分析近期马鹿数量的急剧下降对种群遗传结构的影响。结果表明:167份粪便DNA分属66只个体;种群平均等位基因数9.00±2.77;平均有效等位基因数3.97±0.99;平均多态信息含量0.69±0.09;平均期望杂合度0.74±0.08;平均观察杂合度0.69±0.08。整个种群显著偏离Hardy-Weinberg平衡,但种群固定系数Fis为0.060,没有显著偏离零。可见,完达山东部林区马鹿种群遗传多样性较高,数量的急剧下降近期还没有表现在种群遗传结构上。     

Microsatellite analysis of North American wapiti (Cervus elaphus) populations

Eleven populations of wapiti (Cervus elaphus) were analysed for genetic diversity using 12 microsatellite loci. Samples were taken from Vancouver Island, British Columbia; Burwash and French River herds in Ontario; Ya Ha Tinda Ranch, Alberta; and Banff, Elk Island, Jasper, Kootenay, Riding Mountain, Yellowstone and Yoho National Parks. Overall, wapiti populations have on average three to four alleles per locus and an average expected heterozygosity that ranged from 25.75 to 52.85%. The greatest genetic distances were observed between the Vancouver population and all other populations. Using the assignment test, Roosevelt wapiti (C. e. roosevelti Merriam 1897) assigned only to the Vancouver Island population. The distance and assignment values suggest a divergence of the Roosevelt wapiti from other populations and support the subspecific status for the Vancouver Island population. No evidence was found for the existence of unique Eastern wapiti (C. e. canadensis Erxleben 1777) in the Burwash or French River herds in Ontario. The overlapping distribution of genotypes from indigenous populations from Riding Mountain, Elk Island and Yellowstone National Parks suggests that wapiti were once a continuous population before settlers decimated their numbers. The lack of differentiation between these populations raises questions about the status of Manitoban (C. e.manitobensis Millais 1915) and Rocky Mountain (C. e.nelsoni Bailey 1935) subspecies.     

Habitat selection by wapiti (Cervus elaphus xanthopygus) in Wandashan Mountains, China, based on habitat availability

In 2004 and 2005, we studied winter habitat use and selection by wapiti in Wandashan Mountains, Heilongjiang Province, China. Using Geographic Information System (GIS) and Remote Sensing (RS), we measured habitat availability in terms of the area of each habitat category in the study area. We compared winter habitats used by wapiti and their availability. The results showed that the habitats used by wapiti were disproportional to their availability. Wapiti preferred clear-cuttings, low vegetation coverage (No. 2, 3 NDVI classes), 200–300 m elevation range, south aspect, and 600–700 m distance range away from roads. They also showed different preferences for feeding and resting. The feeding sites tended to be located at broad-leaved stands and clear-cuttings, No. 2, 3 NDVI classes, and south slope, whereas the bedding sites tended to be clear-cuttings, and No. 2, 3, 4 NDVI classes. Using the logistic regression model to predict the probability of habitat use by wapiti in winter, we found that the overall prediction accuracy was 74.4% for the total habitat samples, with 84.2% for the habitat samples used by wapiti and 62.4% for the control samples correctly predicted by using this model.     

通过粪球形态快速鉴定马鹿性别的方法与分子鉴定

通过SRY 基因扩增,对76 份野生东北马鹿粪便DNA 进行了性别鉴定,其中雄性49 份,雌性27 份。观察发现粪球形态可分两类:子弹状、枣核状。子弹状呈短粗型,长宽比较小;枣核状呈细长型,长宽比较大。对76 份样品进行分类:子弹状51 份、枣核状25 份。并以样品长、宽平均值的比值(R)为指标快速聚类,并建立了判别方程。统计指出判别结果与实际性别吻合率79.71% ;形态分类与实际性别吻合率90.56% ,即子弹状为雄性,枣核状为雌性。结果提示今后的野外研究可直接利用粪球形态判定粪样性别,长宽比判别方程可作为辅助。     

黑龙江省老爷岭南部穆棱林区马鹿种群分布数量及生境适宜性评价

开展野生动物种群分布数量和生境适宜性评价研究是制定物种科学保护决策的基础和关键。以东北马鹿(Cervus canadensis xanthopygus)为研究对象,于2015—2020年在黑龙江省老爷岭南部穆棱林区,采用大样方调查方法收集马鹿在雪地留下的足迹信息分析马鹿种群数量;通过相机监测、足迹链跟踪和大样方调查3种方法综合收集马鹿活动点信息,利用最大熵(MaxEnt)建模分析马鹿生境适宜性。马鹿种群分布数量研究结果表明,穆棱林区马鹿种群密度为(0.0645±0.009)只/km~2,种群数量为47—61只,主要分布在研究地区南部的和平、龙爪沟和共和林场。生境分析结果表明：人为干扰因子中,居民区对MaxEnt模型的贡献率为44%,马鹿主要在距居民区距离约5 km和10—15 km的区域活动,在偏僻的林间小道和乡村道路马鹿生境适宜性较高,其对模型贡献率分别为16.8%和10.2%;植被因子中,在距常绿针叶林和针阔混交林距离4 km范围内,随距离增加马鹿生境适宜性逐渐降低。生境适宜性分析结果表明,研究地区马鹿适宜生境和次适宜生境面积为87.09 km~2,仅占研究区域的10.39%,主要...     

Forage quality and patch choice by wapiti (Cervus elaphus)

Recent models suggest that herbivores might optimize energygain by selecting patches of intermediate vegetation biomass.We tested this hypothesis in wapiti (Cervus elaphus) by estimatingdaily rates of energy gain in relation to grass biomass andby measuring patch choice in experimental pastures in whichgrass biomass was manipulated by mowing. The digestible energycontent of grasses declined with increasing biomass due to maturationalchanges in fiber and lignin content. Daily rates of dry matterintake by wapiti increased with grass biomass at a deceleratingrate, implying a Type II functional response. Linking thesevalues to published ad libitum energy intake and energy expenditureparameters, Fryxell's (1991) model predicted that the dailyrate of energy gain should be highest when wapiti feed in grasslandswith 1000–1100 kg/ha. In trials in which grass biomasswithin a mosaic of patches was manipulated experimentally between800–2900 kg/ha, wapiti preferred patches of 1200 kg/ha,close to the value predicted by the energy gain model. Our resultssuggest that the rate of energy gain by wapiti is constrainedby both grass biomass and grass fiber content, the latter ofwhich varies inversely with grass biomass. Behavioral preferencefor grass patches of intermediate biomass and fiber contentcould help explain patterns of aggregation and seasonal migrationreported previously for wapiti.     

基于粪便DNA的青藏高原雪豹种群调查和遗传多样性分析

基于非损伤性取样,利用mtDNA和微卫星DNA遗传标记,对来自青藏高原三江源国家级自然保护区、羌塘国家级自然保护区和甘肃党河南山地区等地的277 份疑似雪豹粪便样品进行了物种鉴定、个体识别和遗传多样性研究。结果显示：在190份成功扩增的mtDNA cyt b基因片段中,确定有89份属于雪豹;微卫星分析确定其属于48个不同的个体。在48个雪豹mtDNA cyt b基因片段中,共检测出13个多态性位点,定义了9个单倍型,单倍型多态性为0.776,核苷酸多态性为 1.50%, 9个单倍型的遗传距离为 0.009-0.058。研究表明在研究区域均存在雪豹分布,并具有一定的遗传多态性,地理距离分布较远的羌塘国家级自然保护区和甘肃党河南山地区的雪豹样品具有一定的遗传差异。     

Population size of lions in Yankari Game Reserve as revealed by faecal DNA sampling

Studies have shown that lion (Panthera leo) populations in West Africa are small, isolated and fragmented. In Nigeria, lions have disappeared from unprotected areas and are nowadays found only in parks and reserves where these populations may still decline. It is therefore urgent to obtain reliable estimates of population sizes at different localities. Direct observational surveys may either fail to count all individuals or count some individuals repeatedly and are therefore associated with unknown levels of estimation errors. More accurate estimates can be obtained if direct counting is combined with DNA‐based individual identification. As lions are difficult to identify individually, presented here is a method that can be a valuable addition to the existing census methods.