共查询到20条相似文献,搜索用时 31 毫秒
1.
Effects of nutrient enrichment on the decomposition of wood and associated microbial activity in streams 总被引:3,自引:0,他引:3
Vladislav Gulis Amy D. Rosemond Keller Suberkropp Holly S. Weyers Jonathan P. Benstead 《Freshwater Biology》2004,49(11):1437-1447
1. We determined the effects of nutrient enrichment on wood decomposition rates and microbial activity during a 3‐year study in two headwater streams at Coweeta Hydrologic Laboratory, NC, U.S.A. After a 1‐year pretreatment period, one of the streams was continuously enriched with inorganic nutrients (nitrogen and phosphorus) for 2 years while the other stream served as a reference. We determined the effects of enrichment on both wood veneers and sticks, which have similar carbon quality but differ in physical characteristics (e.g. surface area to volume ratios, presence of bark) that potentially affect microbial colonisation and activity. 2. Oak wood veneers (0.5 mm thick) were placed in streams monthly and allowed to decompose for approximately 90 days. Nutrient addition stimulated ash‐free dry mass loss and increased mean nitrogen content, fungal biomass and microbial respiration on veneers in the treatment stream compared with the reference. The magnitude of the response to enrichment was great, with mass loss 6.1 times, and per cent N, fungal biomass and microbial respiration approximately four times greater in the treatment versus reference stream. 3. Decomposition rate and nitrogen content of maple sticks (ca. 1–2 cm diameter) also increased; however, the effect was less pronounced than for veneers. Wood response overall was greater than that determined for leaves in a comparable study, supporting the hypothesis that response to enrichment may be greater for lower quality organic matter (high C : N) than for higher quality (low C : N) substrates. 4. Our results show that moderate nutrient enrichment can profoundly affect decomposition rate and microbial activity on wood in streams. Thus, the timing and availability of wood that provides retention, structure, attachment sites and food in stream ecosystems may be affected by nutrient concentrations raised by human activities. 相似文献
2.
We assessed the effect of whole-stream nitrate enrichment on decomposition of three substrates differing in nutrient quality
(alder and oak leaves and balsa veneers) and associated fungi and invertebrates. During the 3-month nitrate enrichment of
a headwater stream in central Portugal, litter was incubated in the reference site (mean NO3-N 82 μg l−1) and four enriched sites along the nitrate gradient (214–983 μg NO3-N l−1). A similar decomposition experiment was also carried out in the same sites at ambient nutrient conditions the following
year (33–104 μg NO3-N l−1). Decomposition rates and sporulation of aquatic hyphomycetes associated with litter were determined in both experiments,
whereas N and P content of litter, associated fungal biomass and invertebrates were followed only during the nitrate addition
experiment. Nitrate enrichment stimulated decomposition of oak leaves and balsa veneers, fungal biomass accrual on alder leaves
and balsa veneers and sporulation of aquatic hyphomycetes on all substrates. Nitrate concentration in stream water showed
a strong asymptotic relationship (Michaelis–Menten-type saturation model) with temperature-adjusted decomposition rates and
percentage initial litter mass converted into aquatic hyphomycete conidia for all substrates. Fungal communities did not differ
significantly among sites but some species showed substrate preferences. Nevertheless, certain species were sensitive to nitrogen
concentration in water by increasing or decreasing their sporulation rate accordingly. N and P content of litter and abundances
or richness of litter-associated invertebrates were not affected by nitrate addition. It appears that microbial nitrogen demands
can be met at relatively low levels of dissolved nitrate, suggesting that even minor increases in nitrogen in streams due
to, e.g., anthropogenic eutrophication may lead to significant shifts in microbial dynamics and ecosystem functioning.
Electronic Supplementary Material Supplementary material is available to authorised users in the online version of this article at . 相似文献
3.
Extracellular Enzyme Activity Associated with Degradation of Beech Wood in a Central European Stream
The degradation of beech wood (Fagus sylvatica L.) was followed over 16 months in a central European upland stream, the Breitenbach. 1 cm3 cubes of beech wood were placed on the stream bed and sampled at monthly intervals. Besides mass loss, fungal biomass (ergosterol content) and lignin content, the activity of two extracellular enzymes was measured: β‐D‐glucosidase, an enzyme involved in the degradation of cellulose, and phenoloxidase, a ligninolytic enzyme. The suitability of the fluorigenic model substrate methylumbelliferyl‐β‐D‐glucoside for measuring β‐D‐glucosidase activity in wood from aquatic environments was tested. This technique is much more sensitive than the conventional photometric method. The beech wood was degraded at a constant rate of k = 0.00272 d–1 across the entire 16‐month incubation period. There was a rapid onset of microbial colonisation, as witnessed by the initial detection of enzyme activity, after only 7 days of exposure. Lignin and ergosterol content as well as β‐glucosidase activity reached their highest values at the end of the 16‐month incubation period. Phenoloxidase activity increased rapidly to a maximum after 6 weeks, and then decreased to almost zero by the end of the experiment. The combination of biochemical techniques for measuring extracellular enzyme activities with measurements of mass loss, chemical composition and microbial colonisation provided valuable insights into the decomposition of wood in aquatic environments. 相似文献
4.
Determination of fungal activity in modified wood by means of micro-calorimetry and determination of total esterase activity 总被引:1,自引:0,他引:1
Beech and pine wood blocks were treated with 1,3-dimethylol-4,5-dihydroxyethylen urea (DMDHEU) to increasing weight percent gains (WPG). The resistance of the treated specimens against Trametes versicolor and Coniophora puteana, determined as mass loss, increased with increasing WPG of DMDHEU. Metabolic activity of the fungi in the wood blocks was assessed as total esterase activity (TEA) based on the hydrolysis of fluorescein diacetate and as heat or energy production determined by isothermal micro-calorimetry. Both methods revealed that the fungal activity was related with the WPG and the mass loss caused by the fungi. Still, fungal activity was detected even in wood blocks of the highest WPG and showed that the treatment was not toxic to the fungi. Energy production showed a higher consistency with the mass loss after decay than TEA; higher mass loss was more stringently reflected by higher heat production rate. Heat production did not proceed linearly, possibly due to the inhibition of fungal activity by an excess of carbon dioxide. 相似文献
5.
David W. P. Manning Amy D. Rosemond Vladislav Gulis Jonathan P. Benstead John S. Kominoski 《Global Change Biology》2018,24(1):e233-e247
Rising temperatures and nutrient enrichment are co‐occurring global‐change drivers that stimulate microbial respiration of detrital carbon, but nutrient effects on the temperature dependence of respiration in aquatic ecosystems remain uncertain. We measured respiration rates associated with leaf litter, wood, and fine benthic organic matter (FBOM) across seasonal temperature gradients before (PRE) and after (ENR1, ENR2) experimental nutrient (nitrogen [N] and phosphorus [P]) additions to five forest streams. Nitrogen and phosphorus were added at different N:P ratios using increasing concentrations of N (~80–650 μg/L) and corresponding decreasing concentrations of P (~90–11 μg/L). We assessed the temperature dependence, and microbial (i.e., fungal) drivers of detrital mass‐specific respiration rates using the metabolic theory of ecology, before vs. after nutrient enrichment, and across N and P concentrations. Detrital mass‐specific respiration rates increased with temperature, exhibiting comparable activation energies (E, electronvolts [eV]) for all substrates (FBOM E = 0.43 [95% CI = 0.18–0.69] eV, leaf litter E = 0.30 [95% CI = 0.072–0.54] eV, wood E = 0.41 [95% CI = 0.18–0.64] eV) close to predicted MTE values. There was evidence that temperature‐driven increased respiration occurred via increased fungal biomass (wood) or increased fungal biomass‐specific respiration (leaf litter). Respiration rates increased under nutrient‐enriched conditions on leaves (1.32×) and wood (1.38×), but not FBOM. Respiration rates responded weakly to gradients in N or P concentrations, except for positive effects of P on wood respiration. The temperature dependence of respiration was comparable among years and across N or P concentration for all substrates. Responses of leaf litter and wood respiration to temperature and the combined effects of N and P were similar in magnitude. Our data suggest that the temperature dependence of stream microbial respiration is unchanged by nutrient enrichment, and that increased temperature and N + P availability have additive and comparable effects on microbial respiration rates. 相似文献
6.
Contribution of Fungi and Bacteria to Leaf Litter Decomposition in a Polluted River 总被引:6,自引:2,他引:4
下载免费PDF全文
![点击此处可从《Applied microbiology》网站下载免费的PDF全文](/ch/ext_images/free.gif)
The contribution of fungi and bacteria to the decomposition of alder leaves was examined at two reference and two polluted sites in the Ave River (northwestern Portugal). Leaf mass loss, microbial production from incorporation rates of radiolabeled compounds into biomolecules, fungal biomass from ergosterol concentration, sporulation rates, and diversity of aquatic hyphomycetes associated with decomposing leaves were determined. The concentrations of organic nutrients and of inorganic nitrogen and phosphorus in the stream water was elevated and increased at downstream sites. Leaf decomposition rates were high (0.013 day−1 < k < 0.042 day−1), and the highest value was estimated at the most downstream polluted site, where maximum values of microbial production and fungal biomass and sporulation were found. The slowest decomposition occurred at the other polluted site, where, along with the nutrient enrichment, the lowest current velocity and dissolved-oxygen concentration in water were observed. At this site, fungal production, biomass, and sporulation were depressed, suggesting that stimulation of fungal activity by increased nutrient concentrations might be offset by other factors. Although bacterial production was higher at polluted sites, fungi accounted for more than 94% of the total microbial net production. Fungal yield coefficients varied from 10.2 to 13.6%, while those of bacteria were less than 1%. The contribution of fungi to overall leaf carbon loss (29.0 to 38.8%) greatly exceeded that of bacteria (4.2 to 13.9%). 相似文献
7.
1. Agriculture causes high sediment, nutrient and light input to streams, which may affect rates of ecosystem processes, such as organic matter decay. In the southern Appalachians, socioeconomic trends over the past 50 years have caused widespread abandonment of farmland with subsequent reforestation. Physical and chemical properties of streams in these reforested areas may be returning to pre‐agriculture levels thereby creating the potential for recovery of ecosystem processes. 2. We examined wood breakdown and microbial activity on wood substrata in streams with different historical and current agricultural activity in their catchments. We analysed historical (1950) and recent (1998) forested land cover from large areas of the southern Appalachians and categorized streams based on percent forested land cover in these two time periods. Categories included a gradient of current agriculture from forested to heavily agricultural and reforestation from agriculture due to land abandonment. We compared microbial respiration on wood veneer substrata and breakdown of wood veneers among these land‐use categories. We also compared temperature, sediment accumulation and nitrogen and phosphorus concentrations. 3. Streams with current agriculture had higher concentrations of dissolved inorganic nitrogen than forested streams. Despite reforestation from agriculture, nitrogen concentrations were also elevated in streams with agricultural histories relative to forested streams. Temperature was also higher in agricultural streams but appeared to recover from historical agriculture through reforestation and stream shading. 4. Wood breakdown rates ranged from 0.0015 to 0.0076 day?1 and were similar to other studies using wood veneers to determine breakdown rate. Microbial respiration increased with incubation time in streams up to approximately 150 days, after which it remained constant. Neither wood breakdown nor microbial respiration was significantly different among land‐use categories, despite the observed physical and chemical differences in streams based on land‐use. Wood breakdown rates could be predicted by microbial respiration indicating microbial control of wood breakdown in these streams. Both breakdown and microbial respiration were negatively correlated with the amount of inorganic sediment accumulated on wood veneers. 5. Higher nutrients and temperature led us to expect faster breakdown and higher microbial respiration in agricultural streams, but sediment in these streams may be limiting microbial activity and breakdown of organic material resulting in little net effect of agriculture on wood breakdown. Wood may not be desirable as a tool for functional assessment of stream integrity due to its unpredictable response to agriculture. 相似文献
8.
The effect of zinc on leaf decomposition by aquatic fungi was studied in microcosms. Alder leaf disks were precolonized for 15 days at the source of the Este River and exposed to different zinc concentrations during 25 days. Leaf mass loss, fungal biomass (based on ergosterol concentration), fungal production (rates of [1-14C]acetate incorporation into ergosterol), sporulation rates, and species richness of aquatic hyphomycetes were determined. At the source of the Este River decomposition of alder leaves was fast and 50% of the initial mass was lost in 25 days. A total of 18 aquatic hyphomycete species were recorded during 42 days of leaf immersion. Articulospora tetracladia was the dominant species, followed by Lunulospora curvula and two unidentified species with sigmoid conidia. Cluster analysis suggested that zinc concentration and exposure time affected the structure of aquatic hyphomycete assemblages, even though richness had not been severely affected. Both zinc concentration and exposure time significantly affected leaf mass loss, fungal production and sporulation, but not fungal biomass. Zinc exposure reduced leaf mass loss, inhibited fungal production and affected fungal reproduction by either stimulating or inhibiting sporulation rates. The results of this work suggested zinc pollution might depress leaf decomposition in streams due to changes in the structure and activity of aquatic fungi. 相似文献
9.
Petra Weißhaupt Annette Naumann Wolfgang Pritzkow Matthias Noll 《Mycological Progress》2013,12(2):283-290
The white-rot fungus Hypholoma fasciculare coexists with a bacterial community that uses low-molecular weight carbon sources provided by fungal, extracellular enzyme activities. Since fungal development on wood is limited by the availability of nitrogen (N), bacteria could contribute to the N supply. To prove or disapprove an interaction in terms of N transfer, N sources of the fungus and the coexisting bacterial isolates were investigated, and the bacterial N2 fixation was quantified. Fungal, fungal—bacterial and bacterial wood decomposition was analysed by Fourier transform infrared spectroscopy (FTIR), mass loss and surface pH. Microbial N preferences were investigated by elemental analysis isotope ratio mass spectrometry (IRMS). In addition, diazotrophic activity was explored after cultivation under a 15?N2/O2 atmosphere. Decomposition was similar with and without bacteria and both H. fasciculare and coexisting bacteria preferred reduced N species, such as urea, ammonium and organic N. In most of the bacteria, the 15?N abundance in the biomass increased significantly but to a low extent if they were cultivated under a 15?N2/O2 atmosphere. This effect is considered an artefact and attributed to adsorption rather than to bacterial N2 fixation activity. Hence, the bacteria coexisting with H. fasciculare rather competed for the same N sources than supported fungal N supply by diazotrophic activity. 相似文献
10.
Comparison of Fungal Activities on Wood and Leaf Litter in Unaltered and Nutrient-Enriched Headwater Streams 总被引:5,自引:0,他引:5
下载免费PDF全文
![点击此处可从《Applied microbiology》网站下载免费的PDF全文](/ch/ext_images/free.gif)
Fungi are the dominant organisms decomposing leaf litter in streams and mediating energy transfer to other trophic levels. However, less is known about their role in decomposing submerged wood. This study provides the first estimates of fungal production on wood and compares the importance of fungi in the decomposition of submerged wood versus that of leaves at the ecosystem scale. We determined fungal biomass (ergosterol) and activity associated with randomly collected small wood (<40 mm diameter) and leaves in two southern Appalachian streams (reference and nutrient enriched) over an annual cycle. Fungal production (from rates of radiolabeled acetate incorporation into ergosterol) and microbial respiration on wood (per gram of detrital C) were about an order of magnitude lower than those on leaves. Microbial activity (per gram of C) was significantly higher in the nutrient-enriched stream. Despite a standing crop of wood two to three times higher than that of leaves in both streams, fungal production on an areal basis was lower on wood than on leaves (4.3 and 15.8 g C m−2 year−1 in the reference stream; 5.5 and 33.1 g C m−2 year−1 in the enriched stream). However, since the annual input of wood was five times lower than that of leaves, the proportion of organic matter input directly assimilated by fungi was comparable for these substrates (15.4 [wood] and 11.3% [leaves] in the reference stream; 20.0 [wood] and 20.2% [leaves] in the enriched stream). Despite a significantly lower fungal activity on wood than on leaves (per gram of detrital C), fungi can be equally important in processing both leaves and wood in streams. 相似文献
11.
Elevated temperature increases the accumulation of microbial necromass nitrogen in soil via increasing microbial turnover 总被引:1,自引:0,他引:1
Xu Wang Chao Wang M. Francesca Cotrufo Lifei Sun Ping Jiang Ziping Liu Edith Bai 《Global Change Biology》2020,26(9):5277-5289
Microbial‐derived nitrogen (N) is now recognized as an important source of soil organic N. However, the mechanisms that govern the production of microbial necromass N, its turnover, and stabilization in soil remain poorly understood. To assess the effects of elevated temperature on bacterial and fungal necromass N production, turnover, and stabilization, we incubated 15N‐labeled bacterial and fungal necromass under optimum moisture conditions at 10°C, 15°C, and 25°C. We developed a new 15N tracing model to calculate the production and mineralization rates of necromass N. Our results showed that bacterial and fungal necromass N had similar mineralization rates, despite their contrasting chemistry. Most bacterial and fungal necromass 15N was recovered in the mineral‐associated organic matter fraction through microbial anabolism, suggesting that mineral association plays an important role in stabilizing necromass N in soil, independently of necromass chemistry. Elevated temperature significantly increased the accumulation of necromass N in soil, due to the relatively higher microbial turnover and production of necromass N with increasing temperature than the increases in microbial necromass N mineralization. In conclusion, we found elevated temperature may increase the contribution of microbial necromass N to mineral‐stabilized soil organic N. 相似文献
12.
The influence of dissolved nutrients and particulate organic matter quality on microbial respiration and biomass in a forest stream 总被引:4,自引:0,他引:4
1. Although dissolved nutrients and the quality of particulate organic matter (POM) influence microbial processes in aquatic systems, these factors have rarely been considered simultaneously. We manipulated dissolved nutrient concentrations and POM type in three contiguous reaches (reference, nitrogen, nitrogen + phosphorus) of a low nutrient, third‐order stream at Hubbard Brook Experimental Forest (U.S.A). In each reach we placed species of leaves (mean C : N of 68 and C : P of 2284) and wood (mean C : N of 721 and C : P of 60 654) that differed in elemental composition. We measured the respiration and biomass of microbes associated with this POM before and after nutrient addition. 2. Before nutrient addition, microbial respiration rates and biomass were higher for leaves than for wood. Respiration rates of microbes associated with wood showed a larger response to increased dissolved nutrient concentrations than respiration rates of microbes associated with leaves, suggesting that the response of microbes to increased dissolved nutrients was influenced by the quality of their substrate. 3. Overall, dissolved nutrients had strong positive effects on microbial respiration and fungal, but not bacterial, biomass, indicating that microbial respiration and fungi were nutrient limited. The concentration of nitrate in the enriched reaches was within the range of natural variation in forest streams, suggesting that natural variation in nitrate among forest streams influences carbon mineralisation and fungal biomass. 相似文献
13.
The contribution of fungi and bacteria to the decomposition of alder leaves was examined at two reference and two polluted sites in the Ave River (northwestern Portugal). Leaf mass loss, microbial production from incorporation rates of radiolabeled compounds into biomolecules, fungal biomass from ergosterol concentration, sporulation rates, and diversity of aquatic hyphomycetes associated with decomposing leaves were determined. The concentrations of organic nutrients and of inorganic nitrogen and phosphorus in the stream water was elevated and increased at downstream sites. Leaf decomposition rates were high (0.013 day(-1) < k < 0.042 day(-1)), and the highest value was estimated at the most downstream polluted site, where maximum values of microbial production and fungal biomass and sporulation were found. The slowest decomposition occurred at the other polluted site, where, along with the nutrient enrichment, the lowest current velocity and dissolved-oxygen concentration in water were observed. At this site, fungal production, biomass, and sporulation were depressed, suggesting that stimulation of fungal activity by increased nutrient concentrations might be offset by other factors. Although bacterial production was higher at polluted sites, fungi accounted for more than 94% of the total microbial net production. Fungal yield coefficients varied from 10.2 to 13.6%, while those of bacteria were less than 1%. The contribution of fungi to overall leaf carbon loss (29.0 to 38.8%) greatly exceeded that of bacteria (4.2 to 13.9%). 相似文献
14.
Microbial activity and soil respiration under nitrogen addition in Alaskan boreal forest 总被引:15,自引:0,他引:15
STEVEN D. ALLISON † CLAUDIA I. CZIMCZIK† KATHLEEN K. TRESEDER † 《Global Change Biology》2008,14(5):1156-1168
Climate warming could increase rates of soil organic matter turnover and nutrient mineralization, particularly in northern high‐latitude ecosystems. However, the effects of increasing nutrient availability on microbial processes in these ecosystems are poorly understood. To determine how soil microbes respond to nutrient enrichment, we measured microbial biomass, extracellular enzyme activities, soil respiration, and the community composition of active fungi in nitrogen (N) fertilized soils of a boreal forest in central Alaska. We predicted that N addition would suppress fungal activity relative to bacteria, but stimulate carbon (C)‐degrading enzyme activities and soil respiration. Instead, we found no evidence for a suppression of fungal activity, although fungal sporocarp production declined significantly, and the relative abundance of two fungal taxa changed dramatically with N fertilization. Microbial biomass as measured by chloroform fumigation did not respond to fertilization, nor did the ratio of fungi : bacteria as measured by quantitative polymerase chain reaction. However, microbial biomass C : N ratios narrowed significantly from 16.0 ± 1.4 to 5.2 ± 0.3 with fertilization. N fertilization significantly increased the activity of a cellulose‐degrading enzyme and suppressed the activities of protein‐ and chitin‐degrading enzymes but had no effect on soil respiration rates or 14C signatures. These results indicate that N fertilization alters microbial community composition and allocation to extracellular enzyme production without affecting soil respiration. Thus, our results do not provide evidence for strong microbial feedbacks to the boreal C cycle under climate warming or N addition. However, organic N cycling may decline due to a reduction in the activity of enzymes that target nitrogenous compounds. 相似文献
15.
Katja T. Rinne‐Garmston Krista Peltoniemi Janet Chen Mikko Peltoniemi Hannu Fritze Raisa Mkip 《Global Change Biology》2019,25(5):1852-1867
Globally 40–70 Pg of carbon (C) are stored in coarse woody debris on the forest floor. Climate change may reduce the function of this stock as a C sink in the future due to increasing temperature. However, current knowledge on the drivers of wood decomposition is inadequate for detailed predictions. To define the factors that control wood respiration rate of Norway spruce and to produce a model that adequately describes the decomposition process of this species as a function of time, we used an unprecedentedly diverse analytical approach, which included measurements of respiration, fungal community sequencing, N2 fixation rate, nifH copy number, 14C‐dating as well as N%, δ13C and C% values of wood. Our results suggest that climate change will accelerate C flux from deadwood in boreal conditions, due to the observed strong temperature dependency of deadwood respiration. At the research site, the annual C flux from deadwood would increase by 27% from the current 117 g C/kg wood with the projected climate warming (RCP4.5). The second most important control on respiration rate was the stage of wood decomposition; at early stages of decomposition low nitrogen content and low wood moisture limited fungal activity while reduced wood resource quality decreased the respiration rate at the final stages of decomposition. Wood decomposition process was best described by a Sigmoidal model, where after 116 years of wood decomposition mass loss of 95% was reached. Our results on deadwood decomposition are important for C budget calculations in ecosystem and climate change models. We observed for the first time that the temperature dependency of N2 fixation, which has a major role at providing N for wood‐inhabiting fungi, was not constant but varied between wood density classes due to source supply and wood quality. This has significant consequences on projecting N2 fixation rates for deadwood in changing climate. 相似文献
16.
A novel two-stage, whole organism fungal biopulping method was examined for increasing the yield of enzymatic hydrolysis of wood into soluble glucose. Liriodendron tulipifera wood chips (1 g) were exposed to liquid culture suspensions of white rot (Ceriporiopsis subvermispora) or brown rot (Postia placenta) fungi and incubated at 28 °C, either alone in single-stage 30 day (one fungal species applied) or two-stage 60 day (both fungal species applied in alternative succession) treatments. Fungi grew in all treatments, but did not significantly decrease the percent carbohydrate content of the wood. Two-stage treatments differed significantly in mass loss depending on order of exposure, suggesting additive or inhibitory fungal interactions occurred. Treatments consisting of C. subvermispora followed by P. placenta exhibited 6 ± 0.5% mass loss and increased the yield of enzymatic hydrolysis by 67-119%. This significant hydrolysis improvement suggests that fungal biopulping technologies could support commercial lignocellulosic ethanol production efforts if further developed. 相似文献
17.
Dimitri Kalenitchenko Sonja K Fagervold Audrey M Pruski Gilles Vétion Mustafa Yücel Nadine Le Bris Pierre E Galand 《The ISME journal》2015,9(12):2657-2670
Wood falls on the ocean floor form chemosynthetic ecosystems that remain poorly studied compared with features such as hydrothermal vents or whale falls. In particular, the microbes forming the base of this unique ecosystem are not well characterized and the ecology of communities is not known. Here we use wood as a model to study microorganisms that establish and maintain a chemosynthetic ecosystem. We conducted both aquaria and in situ deep-sea experiments to test how different environmental constraints structure the assembly of bacterial, archaeal and fungal communities. We also measured changes in wood lipid concentrations and monitored sulfide production as a way to detect potential microbial activity. We show that wood falls are dynamic ecosystems with high spatial and temporal community turnover, and that the patterns of microbial colonization change depending on the scale of observation. The most illustrative example was the difference observed between pine and oak wood community dynamics. In pine, communities changed spatially, with strong differences in community composition between wood microhabitats, whereas in oak, communities changed more significantly with time of incubation. Changes in community assembly were reflected by changes in phylogenetic diversity that could be interpreted as shifts between assemblies ruled by species sorting to assemblies structured by competitive exclusion. These ecological interactions followed the dynamics of the potential microbial metabolisms accompanying wood degradation in the sea. Our work showed that wood is a good model for creating and manipulating chemosynthetic ecosystems in the laboratory, and attracting not only typical chemosynthetic microbes but also emblematic macrofaunal species. 相似文献
18.
Weiwei Wang Deborah Page-Dumroese Martin Jurgensen Joanne Tirocke Yong Liu 《Journal of plant research》2018,131(6):897-905
The effects of forest thinning and wood quality on wood decomposition in the mineral soil were investigated in a Chinese pine (Pinus tabuliformis Carriére) plantation in northern China by measuring mass loss and changes in wood properties (carbohydrates, lignin and nitrogen (N) concentrations) in wood stakes of two tree species—loblolly pine (Pinus taeda L.) and trembling aspen (Populus tremuloides Michx.). Stakes were inserted to a 20 cm soil depth in stands with three thinning levels (low, moderate, and heavy) and an unharvested control and removed after 1 year. There were significant differences in stake mass loss among the treatments. The species effect on the stake mass loss was marginally significant. Wood N content of both species increased during decomposition in all thinning treatments, and was only correlated with aspen mass loss. Wood properties of stakes placed in each stand before insertion (t?=?0) were similar, except for pine lignin concentration and aspen lignin: N ratio, but neither had any effect on thinning treatment results. Lignin concentration increased and carbohydrate concentration decreased in both aspen and pine wood stakes during decomposition across all thinning treatments, which suggests that brown-rot fungi are dominant wood-decomposers on our study site. We conclude that thinning has a significant influence on the wood decomposition in the mineral soil of this Chinese pine plantation. 相似文献
19.
VERÓNICA DÍAZ VILLANUEVA RICARDO ALBARIÑO CRISTINA CANHOTO 《Freshwater Biology》2012,57(12):2504-2513
1. Animals play a major role in nutrient cycling via excretory processes. Although the positive indirect effects of grazers on periphytic algae are well understood, little is known about top‐down effects on decomposers of shredders living on leaf litter. 2. Nutrient cycling by shredders in oligotrophic forest streams may be important for the microbial‐detritus compartment at very small spatial scales (i.e. within the leaf packs in which shredders feed). We hypothesised that insect excretion may cause local nutrient enrichment, so that microorganism growth on leaves is stimulated. 3. We first tested the effect of increasing concentration of ammonium (+10, +20 and +40 μg NH4+ L?1) on fungal and bacterial biomass on leaf litter in a laboratory experiment. Then we performed two experiments to test the effect of the presence and feeding activity of shredder larvae. We used two species belonging to the trichopteran family Sericostomatidae: the Palaearctic Sericostoma vittatum and the Neotropical Myothrichia murina, to test the effect of these shredders on fungal and bacterial biomass and decomposition on leaves of Quercus robur and Nothofagus pumilio, respectively. All experiments were run in water with low ammonium concentrations (2.4 ± 0.34 to 14.47 ± 0.95 μg NH4+ L?1). 4. After 5 days of incubation, NH4 concentrations were reduced to near‐ambient streamwater concentrations in all treatments with leaves. Fungal biomass was positively affected by increased ammonium concentration. On the other hand, bacteria abundance was similar in all treatments, both in terms of abundance (bacteria cells mg?1 leaf DW) and biomass. However, there was a tendency towards larger mean cell size in treatments with 20 μg NH4 L?1. 5. In the experiment with S. vittatum, fungal biomass in the treatment with insects was more than twice that in the control after 15 days. Bacteria were not detected in treatments with insects, where hyphae were abundant, but they were abundant in treatments without larvae. In the decomposition experiment run with M. murina, leaf‐mass loss was significantly higher in treatments with larvae than in controls. 6. Our hypothesis of a positive effect of shredders on fungal biomass and decomposition was demonstrated. Insect excretion caused ammonium concentration to increase in the microcosms, contributing to microbial N uptake in leaf substrata, which resulted in structural and functional changes in community attributes. The positive effect of detritivores on microbes has been mostly neglected in stream nutrient‐cycling models; our findings suggest that this phenomenon may be of greater importance than expected in stream nutrient budgets. 相似文献
20.
SUMMARY 1. Breakdown of wood was compared at three sites of the Agüera catchment (Iberian Peninsula): two oligotrophic first‐order reaches (one under deciduous forest, the other under Eucalyptus globulus plantations) and one third‐order reach under mixed forest, where concentration of dissolved nutrients was higher. 2. Branches (diameter = 3 cm, length = 10 cm) of oak (Quercus robur), alder (Alnus glutinosa), pine (Pinus radiata) and eucalyptus, plus prisms (2.5 × 2.5 × 10 cm) of alder heartwood were enclosed in mesh bags (1 cm mesh size) and placed in the streams. Mass loss was determined over 4.5 years, whereas nutrient, lignin and ergosterol were determined over 3 years. In order to describe fungal dynamics, ergosterol was also determined separately on the outer and inner parts of some branches. 3. Breakdown rates ranged from 0.0159 to 0.2706 year?1 with the third‐order reach having the highest values whatever the species considered. The most rapid breakdown occurred in alder heartwood and the slowest in pine branches; breakdown rates of oak, eucalyptus and alder branches did not differ significantly. 4. The highest nitrogen and phosphorus contents were found in alder, followed by oak, while pine and eucalyptus had low values. During breakdown, all materials rapidly lost phosphorus, but nitrogen content remained constant or slightly increased. Lignin content remained similar. 5. Peaks of ergosterol ranged from 0.023 to 0.139 mg g?1 and were higher in alder than in other species in two of the three sites. The third‐order reach generally had the greatest increase in ergosterol, especially in alder branches, eucalyptus and alder heartwood. The overall species/site pattern of fungal biomass was thus consistent with the observed differences in breakdown. 6. When compared with leaves of the same species decomposing at these sites, wood breakdown appeared to be less sensitive to the tree species but more sensitive to stream water chemistry. Although wood breakdown is slower and its inputs are lower than those of leaf litter, its higher resistance to downstream transport results in a relatively high standing stock and a significant contribution to the energy flux. 相似文献