MEASUREMENT OF PHOTOGRAPHIC QUALITY AND INDIVIDUAL DISTINCTIVENESS FOR THE PHOTOGRAPHIC IDENTIFICATION OF HUMPBACK WHALES, MEGAPTERA NOVAEANGLIAE

Accurate identification of humpback whales from photographic identification data depends on the quality of the photographs and the distinctiveness of the flukes. Criteria for evaluating photographic quality and individual distinctiveness were developed involving judgments about overall quality or distinctiveness and about specific aspects of each. These criteria were tested for the level of agreement among judges. The distinctiveness scheme was tested for the independence of distinctiveness judgments and photographic quality. Our results show that judges could agree when evaluating specific and overall aspects of photographic quality and individual distinctiveness. The level of agreement varied for different pairs of judges, and less adept judges were identified. Ability to agree on evaluations of photographic quality was independent of the experience of the judges. Overall photographic quality and overall distinctiveness were successfully predicted from more specific variables, but the agreement between judges for these was not significantly greater than the agreement for the overall measures judged directly. There was no correlation between individual distinctiveness and photographic quality for four of the five judges, but the power of this rest may be low. Analyses of photographic identification data frequently require evaluations of photographic quality and individual distinctiveness. To obtain reliable results from such analyses, evaluation schemes and judges should be tested to ensure reliable and consistent evaluations.     

Portrait Obsession: Reproducing Gypsy Identity through Photographs

This article examines the importance Gypsies attribute to photographic images of themselves, suggesting that such images play a crucial role in the reproduction and questioning of their identity. Based on empirical evidence collected among Gypsy communities in the Lisbon urban area, the article tests its main hypothesis through a detailed analysis of two key dimensions: the photographic session as an intense interactive situation and the content of the photographic images. An analytical reflection concludes that the Gypsy photography phenomenon might be understood as a kind of ritual.     

Photographic detection of fluorescent-labelled oligodeoxynucleotide in the blotting format by peroxyoxalate chemiluminescence

The preparation of a fluorescent labelled oligonucleotide and its photographic detection by peroxyoxalate chemiluminescence (PO-CL) are described. Fluorescent labelling of an oligonucleotide (15-mer) was performed with naphthalene-2,3-dicarboxaldehyde to give an N-substituted 1-cyanobenz[f]isoindole (CBI) derivative (CBI-15-mer). For the photographic detection of CBI-15-mer, the bis(2,6-difluorophenyl) oxalate (DFPO)-dimethyl phthalate (DMP) system was selected to obtain a long-lived CL emission. After optimizing the conditions for the CL reaction, the system was applied to the photographic detection, and as little as 250 fmol per spot of CBI-15-mer on a membrane were detected as a visible spot with an instant photographic film. © 1998 John Wiley & Sons, Ltd.     

Ultraviolet-sensitive photographic process using enzymes

A unique silver-free and ultraviolet (UV)-sensitive photographic process using enzymes has been developed. It utilizes α-chymotrypsin acylated to a light-sensitive stereoisomeric ester as the basic photographic material. When UV light is exposed to the file, the signal is registered by the appearance of melanin pigment through the chymotrypsin-mediated activation of pre-tyrosinase.     

A Basic Camera Unit for Medical Photography

A camera unit suitable for most medical photographic purposes is described. The unit comprises a single-lens reflex camera, an electronic flash unit and supplementary lenses. Simple instructions for use of th''s basic unit are presented. The unit is entirely suitable for taking fine-quality photographs of most medical subjects by persons who have had little photographic training.     

Assessing the capabilities of a 4kx4k CCD camera for electron cryo-microscopy at 300kV

CCD cameras have numerous advantages over photographic film for detecting electrons; however the point spread function of these cameras has not been sufficient for single particle data collection to subnanometer resolution with 300kV microscopes. We have adopted spectral signal to noise ratio (SNR) as a parameter for assessing detector quality for single particle imaging. The robustness of this parameter is confirmed under a variety of experimental conditions. Using this parameter, we demonstrate that the SNR of images of either amorphous carbon film or ice embedded virus particles collected on a new commercially available 4kx4k CCD camera are slightly better than photographic film at low spatial frequency (<1/5 Nyquist frequency), and as good as photographic film out to half of the Nyquist frequency. In addition it is slightly easier to visualize ice embedded particles on this CCD camera than on photographic film. Based on this analysis it is realistic to collect images containing subnanometer resolution data (6-9A) using this CCD camera at an effective magnification of approximately 112000x on a 300kV electron microscope.     

Estimating the proportion of identifiable individuals and group sizes in photographic identification studies

Simple Bayesian statistical models are introduced to estimate the proportion of identifiable individuals and group sizes in photographic identification, or photo‐ID, studies of animals that are found in groups. The models require a simple random photographic sampling of animals, where the photographic captures are treated as sampling with replacement within each group. The total number of images, including those that cannot be identified, and the number of images that contain identifiable individuals are used to make inference about the proportion of identifiable individuals within each group and as the population when a number of groups are sampled. The numbers of images for individuals within each group are used to make inference about the group size. Based on analyses of simulated and real data, the models perform well with respect to accuracy and precision of posterior distributions of the parameters. Widths of posterior intervals were affected by the number of groups sampled, sampling duration, and the proportion of identifiable individuals in each group that was sampled. The structure of the models can accommodate covariates, which may affect photographic efficiency, defined in this study as the probability of photographically capturing individuals.     

Photography as a tool of research and documentation in plant tissue culture

Summary Scientific photography is an important facet of plant tissue culture. The aim of photography in plant tissue culture should be to illustrate clearly the developmental stages occurring in vitro. However, the photographic results presented in publications are often poor, and morphogenetic responses are often not clearly documented. Plant tissue culture is a very visual science, and the valuable tool of photography is often not used properly. If the morphogenetic responses are not well documented, an important part of the reserch is missed, and the report ends up having limited scientific value. Simple methods for improving the results of photography in plant tissue culture are discussed, along with photographic equipment, photomacrography, stereophotomicrography, suitable backgrounds for photography, use of a digital scanner, and the construction of photographic plates.     

ESTIMATION OF BODY MASS IN THE SOUTHERN ELEPHANT SEAL, MIROUNGA LEONINA, BY PHOTOGRAMMETRY AND MORPHOMETRICS

A simple photographic technique was developed to indirectly estimate body mass data for southern elephant seal ( Mirounga leonina ) cows (postlactation), yearlings, and immature males and females. Regressions of mass on both photographic and morphometric variables (together and separately) yielded useful, predictable models. Using such variables, the best estimation of the actual mass was for postlactation cows, with a 95% confidence interval of ± 2.66% of the predicted body mass. Although combining photographic and morphometric variables produced the most reliable models specifically for cows and yearlings, the most practical model contained only the morphometric variables length and girth squared. Side area was the best correlated single photographic variable and this corresponded with other studies. Photogrammetry could be useful when animals cannot be sedated and are located on a flat surface, but it does require animals to be motionless when approached. Thus, the procedure may be more suited to bulls rather than other age classes and could have a role in studies where large numbers of mass estimations are rapidly required. If sedation is utilized in smaller animals, then the use of body length and girth is the most suitable indirect mass estimation technique to avoid the use of heavy weighing equipment.     

Conventional digital cameras as a tool for assessing leaf area index and biomass for cereal breeding

Affordable and easy-to-use methods for assessing biomass and leaf area index （LAI） would be of interest in most breeding programs. Here, we describe the evaluation of a protocol for photographic sampling and image analysis aimed at providing low-labor yet robust indicators of biomass and LAI. In this trial, two genotypes of triticale, two of bread wheat, and four of tritordeum were studied. At six dates during the growing cycle, biomass and LAI were measured destructively, and digital photography was taken on the same dates. Several vegetation indices were calculated from each image. The results showed that repeatable and consistent values of the indices were obtained in consecutive photographic samplings on the same plots. The photographic indices were highly correlated with the destructive measure-ments, though the magnitude of the correlation was lower after anthesis. This work shows that photographic assess-ment of biomass and LAI can be fast, affordable, have good repeatability, and can be used under bright and overcast skies. A practical vegetation index derived from pictures is the fraction of green pixels over the total pixels of the image, and as it shows good correlations with all biomass variables, is the most robust to lighting conditions and has easy interpretation.     

Imagining the Real: The Photographic Image and Imagination in Knowledge Production

The exploratory discussion in this article starts from the fact that it is the realism of photographic representations which enables them, in an indexical sense, to point back to a reality beyond themselves as images. In the same vein, it is as a metonymic space-time fragment that the photograph can indicate a continuation of reality beyond its own framing of the visible. Or, putting it differently, rather than constituting transparent representations, presence in photographs is evoked through absence of the real. What is not problematized in photographic theory and visual anthropology is that photographs thus depend on imagination for their interpretative connection to reality. My argument sees photographic practice as interference, which pushes the medium past the implicit positivist premise for visual knowledge production in anthropology. Furthermore, when understanding the ability to imagine as movements in reason, the separation between imagination and reason, presumed necessary for the scientific production of knowledge, is also challenged. Concerned with rethinking photography in visual anthropology, imagination’s role in knowledge production will be explored through my photographic art project, Houses/Homes.     

Survival estimation of a cryptic antelope via photographic capture–recapture

Adult survival is a primary determinant of abundance and dynamics of large herbivore populations. For species that are inconspicuous, however, accurate survival estimation depends on accommodating low detection probability. For species with individually recognizable markings, photographic capture–recapture (CR) provides an approach to estimate population parameters while accounting for imperfect detection. I investigated the use of photographic CR for a cryptic large herbivore, the nyala, in a region of Hluhluwe–iMfolozi Park, South Africa. I conducted photographic sampling based on the closed robust design, with 5–6 daily sampling occasions nested within three week‐long sampling periods, which delineated one dry and one wet season. Detection differed between sexes: encounter probability of female adults depended on whether individuals fell into high‐encounter (seasonal range: 0.61–0.71) or low‐encounter (seasonal range: 0.29–0.40) groups, whereas male adults had a constant encounter probability of 0.39 per day. For both sexes, monthly survival probability was ≥0.93 and did not differ appreciably between seasons or sexes. Given the role of survival in population dynamics, photographic CR has the potential to provide survival estimates for cryptic large herbivores that lack such information.     

Histological Processing in Autoradiography: Loss of Radioactivity

Histological methods suitable for use in autoradiographic technics are described. An investigation has been carried out on the amount of activity lost from rat and human tissues during fixation and dehydration. Losses in the processing fluids varied from 25% to 90% of the initial activity for radioactive phosphorus and 4% to 20% for radioactive iodine in various fixatives.

The care necessary in handling sections if distribution of total activity is being studied is emphasized and floating on absolute alcohol is suggested as an alternative to warm mercury. Various procedures for staining sections before application of photographic emulsion and after developing are discussed. Ehrlich's hematoxylin applied regressively has given good results and eosin has been used successfully as a counterstain. Orth's lithium carmine is resistant to photographic developer and also Feulgen's stain counterstained with fast green can be used before covering the slides with photographic emulsion.     

Photographic colorimetry as a quantitative cytochemical method

Summary A method for quantitative cytophotometry based on the photographic method of Ornstein is described. Taking special precautions, photographic negatives are made of microscopic objects with light from the appropriate part of the spectrum. Enlarged prints, developed in a blue colour, are made from these negatives. Stirring with a stream of nitrogen was applied in this procedure.The images of the objects in the blue print are cut out, and the amount of dye proportional to the integrated extinction of the objects is measured in a colorimeter. This method, for which the name photographic colorimetry is proposed, was tested on Feulgen-stained nuclei from various sources. The reproducibility of the method was found to range from 3 to 5%.Submitted in partial fulfillment of the requirements for Ph. D. degree (Den Tonkelaar 1963).     

Comparison of two methods for linear measurement of ossified tissue in cleared mouse fetuses

Two methods of measuring cranial structures, the direct method and a photographic method, have been compared in day 18 mouse fetuses that have been stained with alizarin red S and cleared. Variation was determined for repeated measurements with each technique of the same specimen as well as the variation among specimens. There was variation in the results of direct measurements of the same specimens, but this was significantly (P less than 0.05) less than the variation among specimens, and the variation of measurements of the same specimen made using the photographic method was not significantly (P greater than 0.2) different from the variation among the specimens, and the variation of the specimens was not significantly (P greater than 0.2) different between the photographic and direct methods. Direct measurement is recommended for making linear measurements on the cleared skull. The photograph method allows better delineation of angles and calculation of surface area.     

A key for the identification of the hair of mammals of a snow leopard (Panthera uncia) habitat in Nepal

Analysis of prey remains in scats, particularly hairs, is widely used to study diet of mammalian predators, but identification of hair is often difficult because hair structures vary considerably both within and between species. Use of photographic reference of diagnostically important hair structures from mammals occurring in a predator's habitat has been found to he convenient for routine identification. A photographic reference key was developed for the identification of hairs of the mammals known to occur in a snow leopard ( Panthera uncia ) habit at in the Annapurna Conservation Area, Nepal. The key included a photographic reference of the diagnostic hair structures of nine species of wild and five species of domestic mammals. The cross-sectional appearance, shape and arrangement of medulla, the ratio of cortex to medulla. and the form and distribution of pigment in medulla and cortex were important diagnostic aids in the identification of hairs.     

Fungal biosorption of silver particles on 20th-century photographic documents

Microbial deterioration is a common problem in photographic collections and is considered a major cause of loss of documents. However, few studies so far have been addressed to biological damage on these materials. Several species of naturally occurring fungi can cause infections on the gelatin-silver emulsion of both positive and negative photographic material, producing defacement and loss of mechanical and aesthetical properties of the objects. In this study a particular phenomenon, spontaneously caused by fungi on 20th-century photographic films and positive supports, was documented by means of variable pressure scanning electron microscopy (VP-SEM) combined with electronic dispersion spectroscopy (EDS). This technique allowed the observation of entire, unaltered films without metallisation thus with a not invasive approach. The ability of some fungi to alter the distribution of silver crystals in the gelatin emulsion was described thanks to a backscattered electrons detector that showed differences in the atomic number of the visualised objects, giving rise to an appreciable contrast in case of different chemical composition.     

The quantitation of fluorescence by photography.

A method based on theory has been developed for the photographic quantitation of fluorescent substances. DNA stained with ethidium in agarose gels is used as an example of an application of this method. In the course of developing this method we have demonstrated that the empirical methods employed by others authors can give rise to large systematic errors. We have also developed an approximate method based on photographic theory, avoiding the use of digital integration which is required by the rigorous method.     

Quantitation of ultraviolet radiation-induced cyclobutyl pyrimidine dimers in DNA by video and photographic densitometry

We have compared video and photographic methods for calculating the number of ultraviolet radiation (uv)-induced pyrimidine dimers in DNA from the bacteriophage T7 exposed to uv (0 to 800 J/m2) from an FS40 sunlamp. DNA was incubated with a pyrimidine dimer-specific Micrococcus luteus uv endonuclease, subjected to alkaline agarose gel electrophoresis, neutralized, and stained with ethidium bromide, and the DNA fluorescence was recorded either with a video camera or on photographic film. The slopes of the dose-response curves for the number of uv-endonuclease-sensitive sites per 10(3) bases (pyrimidine dimers) was 1.2 (+/- 0.1) X 10(-4) uv-endonuclease-sensitive sites per J/m2 for the video analysis and 1.3 (+/- 0.04) X 10(-4) uv-endonuclease-sensitive sites per J/m2 for the photographic analysis. Results for pyrimidine dimer determination by either method were statistically comparable.     

An improved staining technique for precipitin bands in agar or agarose gels

A method for the staining of proteins in agar and agarose gels using three stains simultaneously and a mordant is described. When compared with conventional Coomassie brilliant blue R-250 staining procedures, it requires a comparable time expenditure but has the following advantages: 1) it is threefold to fourfold more sensitive; 2) there is increased photographic resolution on conventional photographic material; and 3) the stain has a long shelf-life and does not fade under normal lighting conditions. Conditions for the washing and drying of gels are discussed.