GABA A -receptors: Structural requirements and sites of gene expression in mammalian brain

GABA_A-receptors, the major synaptic targets for the neutotransmitter GABA, are gated chloride channels. By their allosteric drug-induced modulation they serve as molecular control elements through which the levels of anxiety, vigilance, muscle tension and epileptiform activity can be regulated. Despite their functional prominence, the structural requirements of fully functional GABA_A-receptors are still elusive. Expression of cDNAs coding for the ₁- and ₁-subunits of rat brain yielded GABA-gated chloride channels which were modulated by barbiturates but displayed only agonistic responses to ligands of the benzodiazepine receptor. GABA_A-receptors with fully functional benzodiazepine receptor sites were formed when the ₁- and ₁-subunits were coexpressed with the ₂-subunit of rat brain. These receptors, however, failed to show cooperativity of GABA in gating the channel. In order to determine the subunit repertoire available for receptor assembly in different neuronal populations in vivo, the sites of subunit gene expression were (₁, ₂, ₃, ₅, ₆, ₁, ₂, ₃, ₂) mapped by in situ hybridization histochemistry in brain sections. The mRNAs of the ₁-, ₁- and ₂-subunits were co-localized e.g. in mitral cells of olfactory bulb, pyramidal cells of hippocampus as well as granule cells of dentate gyrus and cerebellum. The lack of colocalization in various other brain areas points to an extensive receptor heterogeneity. The presence of multiple GABA_A-receptors in brain may contribute to synaptic plasticity, differential responsiveness of neurons to GABA and to variations in drug profiles.Special issue dedicated to Dr. Erminio Costa     

The photosynthetic F1-α3β3 and α1β1 catalytic core complexes

Minimal photosynthetic catalytic F₁() core complexes, containing equimolar ratios of the and subunits, were isolated from membrane-bound spinach chloroplast CF₁ and Rhodospirillum rubrum chromatophore RrF₁. A CF₁-₃₃ hexamer and RrF₁-₁₁ dimer, which were purified from the respective F₁() complexes, exhibit lower rates and different properties from their parent F₁-ATPases. Most interesting is their complete resistance to inhibition by the general F₁ inhibitor azide and the specific CF₁ inhibitor tentoxin. These inhibitors were earlier reported to inhibit multisite, but not unisite, catalysis in all sensitive F₁-ATPases and were therefore suggested to block catalytic site cooperativity. The absence of this typical property of all F₁-ATPases in the ₁₁ dimer is consistant with the view that the dimer contains only a single catalytic site. The ₃₃ hexamer contains however all F₁ catalytic sites. Therefore the observation that CF₁-₃₃ can bind tentoxin and is stimulated by it suggests that the F₁ subunit, which is required for obtaining inhibition by tentoxin as well as azide, plays an important role in the cooperative interactions between the F₁-catalytic sites.Abbreviations CF₀F₁ chloroplast F₀F₁ - CF₁ chloroplast F₁ - CF₁ chloroplast F₁ subunit - CF₁ chloroplast F₁ subunit - CF₁() a complex containing equal amounts of the CF₁ and subunits - MF₁ mitochondrial F₁ - RrF₀F₁ Rhodospirillum rubrum F₀F₁ - RrF₁ R. rubrum F₁ - RrF₁ R. rubrum F₁ subunit - RrF₁ R. rubrum F₁ subunit - RrF₁() a complex containing equal amounts of the RrF₁ and subunits - Rubisco Ribulose-1,5-bisphosphate carboxylase - TF₁ thermophilic bacterium PS3 F₁     

α-Subunit Composition of Nicotinic Cholinoreceptors of Neurons of the Inferior Mesenteric Ganglion of the Guinea Pig: an Electrophysiological Study

We studied the subunit composition of nicotinic cholinoreceptors (nChR) of neurons of the inferior mesenteric ganglion (IMG) of the guinea pig using antibodies against the ₃, ₄, ₅, and ₇ nChR subunits and a standard technique of intracellular recording. Application of the ₃ subunit-specific antibodies resulted in a decrease in the EPSP amplitude by 29.7 ± 1.8%, on average, in 17 of 20 studied neurons. The ₄ subunit-specific antibodies evoked no changes in the amplitude of EPSP recorded from IMG neurons (n = 10). Effects of the ₅ subunit-specific antibodies were studied in 20 neurons, where the EPSP amplitude dropped after application of these antibodies by 40.0 ± 1.8%, on average. Superfusion of the neurons with a solution containing the ₃ and ₅ subunit-specific antibodies completely suppressed synaptic responses (n = 3). The ₇ subunit-specific antibodies provided an increase in the EPSP amplitude in 13 of 15 studied IMG neurons (by 37 ± 6%, on average); this fact allows us to suppose that ₇-containing nChR are present in the IMG neurons and are indirectly involved in the processes of synaptic transmission. Application of the antibodies evoked no significant shifts in the membrane potential in IMG neurons. Our findings demonstrate that synaptic transmission through the guinea pig IMG is realized mostly with the involvement of the ₃- and ₅-containing nChR; the ₄-containing receptors are not engaged in this process.     

Synthesis and structures of bimetallic silicon-containing imido alkylidene complexes of molybdenum Me2Si[CHMo(NAr)(ORF3)2]2 and PhVinSi[CHMo(NAr)(ORF3)2]2

Bimetallic alkylidene complexes of molybdenum (R_F3O)₂(ArN)MoCH-SiMe₂-CHMo(NAr)(OR_F3)₂ (1) and (R_F3O)₂(ArN)MoCH-SiPhVin-CHMo(NAr)(OR_F3)₂ (2) (Ar = 2,6-C₆H₃; R_F3 = CMe₂CF₃) have been prepared by the reactions of vinyl silicon reagents Me₂Si(CHCH₂)₂ and PhSi(CHCH₂)₃ with known alkylidene compound PhMe₂C-CHMo(NAr)(OR_F3)₂. Complexes 1 and 2 were structurally characterized. Ring opening metathesis polymerization (ROMP) of cyclooctene using compounds 1 and 2 as initiators led to the formation of high molecular weight polyoctenamers with predominant trans-units content in the case of 1 and predominant cis-units content in the case of 2.     

In situ alkylation of 4,4′-bipyridine in hydrothermal synthesis of one-dimensional copper(I) bromide compounds

Hydrothermal reaction of CuBr₂, 4,4′-bipyridine and ethanol/methanol generated two copper (I) bromide complexes with in situ alkylated 4,4′-bipyridium, namely [C₁₄H₁₈N₂][Cu₅Br₇] (1) and [C₁₂H₁₄N₂][Cu₄Br₆] (2). The structure of 1 consists of chains and N,N′-diethyl-4,4′-bipyridinium. The underlying structural motif in of 1 is the Cu₅Br capped square pyramid, which is different from the Cu₅Br₂ pentagonal bipyramidal structural motif in various documented anions. The in 1 contains untypical μ₅-bromide, with which five copper atoms forms a capped square pyramid rather than a pentagonal pyramid as predicted by Subramanian and Hoffmann. Compound 2 is isostructural with [C₁₂H₁₄N₂][Cu₄Cl₆] reported by Willett, and consists of chains and N,N′-dimethyl-4,4′-bipyridinium. The chain is composed of alternating Cu₆Br₆ and Cu₂Br₆ units.     

XXXY sex chromosomes in males of the jumping spider genus Pellenes (Araneae: Salticidae)

Observations of male meiosis and female chromosome number indicate that eight species of Pellenes have the X₁X₂O male, X₁X₁X₂X₂ female sex chromosome system typical of salticids, four species have an X₁X₂X₃Y male, X₁X₁X₂X₃X₃X₃ female system, and one species has both X₁X₂O and X₁X₂X₃Y males. This is the first report of a Y chromosome in spiders. It is hypothesized that the X₁X₂X₂Y system was derived from an X₁X₂O system by a tandem X-autosome fusion which yielded the X₂ and a centric autosome-autosome fusion which yielded the Y. Data on heteropycnosis, chiasmata, segregation, chromosome number and arm length support this hypothesis. The distribution of the X₁X₂X₃Y system within the genus is phylogenetically confusing and suggests that the two sex chromosome systems have been maintained together as a polymorphism in some lineages for long periods of time or that there have been repeated derivations of the X₁X₂X₃Y or X₁X₂O systems.     

Recent developments on structural and functional aspects of the F1 sector of H+-linked ATPases

Summary This review concerns the catalytic sector of F₁ factor of the H⁺-dependent ATPases in mitochondria (MF₁), bacteria (BF₁) and chloroplasts (CF₁). The three types of Ft have many similarities with respect to the structural parameters, subunit composition and catalytic mechanism. An ₃₃₂₂₂ stoichiometry is now accepted for MF₁ and BF₁; the ₂₂₂₂₂ stoichiometry for CFI remains as matter of debate. The major subunits , and are equivalent in MF₁, BF₁ and CF₁; this is not the case for the minor subunits and . The subunit of MFI corresponds to the subunit of BF₁ and CF₁, whereas the mitochondria) subunit equivalent to the subunit of BF₁ and CF₁ is probably the oligomycin sensitivity conferring protein (OSCP). The a assembly is endowed with ATPase activity, being considered as the catalytic subunit and y as a proton gate. On the other hand, the 6 and E subunits of BFI and CFI most probably act as links between the F₁ and F₀ sectors of the ATPase complex. The natural mitochondria) ATPase inhibitor, which is a separate protein loosely attached to MF₁, could have its counterpart in the E subunit of BF₁ and CF₁. The generally accepted view that the catalytic subunit in the different F₁ species is comes from a number of approaches, including chemical modification, specific photolabeling and, in the case of BF₁, use of mutants. The a subunit also plays a central role in catalysis, since structural alteration of a by chemical modification or mutation results in loss of activity of the whole molecule of F₁. The notion that the proton motive force generated by respiration is required for conformational changes of the F₁ sector of the H⁺-ATPase complex has gained acceptance. During the course of ATP synthesis, conversion of bound ADP and P_i into bound ATP probably requires little energy input; only the release of the F₁-bound ATP would consume energy. ADP and P_i most likely bind at one catalytic site of F₁, while ATP is released at another site. This mechanism, which underlines the alternating cooperativity of subunits in F₁, is supported by kinetic data and also by the demonstration of partial site reactivity in inactivation experiments performed with selective chemical modifiers. One obvious advantage of the alternating site mechanism is that the released ATP cannot bind to its original site. The chemistry of the condensation reaction of ADP and P_i to form ATP has not yet been elucidated. Although implicitly admitted, definite evidence that the condensation reaction does not involve a phosphorylated intermediate has been acquired recently by analysis of the stereochemical course of the phosphoric residue transfer in ATP synthesis or hydrolysis. Whereas the catalytic events of ATP synthesis are well understood, the regulatory mechanism, and particularly the role of the so-called inhibitory peptides, remain enigmatic.     

Integrins: cell adhesives and modulators of cell function

Summary Integrins encompass a family of cell-surface molecules which play a crucial role in cell-cell and cell-extracellular matrix interaction. Of these heterodimeric transmembrane glycoproteins (consisting of an and chain) as yet at least 20 different types have been described, all with a different pattern of reactivity with extracellular matrix components. In this review the cell and tissue distribution of the integrins is discussed, with special emphasis on immunohistochemical localization of the ₁ integrins and the ₆₄ integrin. The ₁ integrins comprise a subfamily in which eight chains combine with one (the ₁) chain. The ₂₁, ₃₁ and ₆₁ and the ₆₄ integrins are expressed on a wide variety of epithelia on the basolateral surface or exclusively on the basal surface facing the basement membrane (e.g. ₆₁ and ₆₄). Leucocyte integrins, which share a common ₂ chain, occur almost exclusively on white blood cells and their precursors. The vitronectin receptors, which share a common _v chain, occur in a wide variety of cell types. Integrins play a major role in the interaction of the cell with the extracellular matrix in order to create and maintain tissue architecture. It has become clear, however, that through integrin-ligand interaction cell function is also modulated. Furthermore, in pathological conditions integrins play a role of some significance. Integrins mediate leucocyte traffic in developing inflammatory processes and function in neoplastic growth when it comes to invasion and metastasis.     

Reactivity of alkynyl Pd(II) azido complexes toward organic isocyanides, isothiocyanates, and nitriles

Alkynyl Pd(II) azido complexes of the type [Pd(N₃)(CCR)L₂] (1-3) were obtained by reactions of aqueous NaN₃ with [Pd(Cl)(CCR)L₂] (R = Ph or C(O)OMe). Treating compounds 1-3 with organic isocyanides (R-NC) afforded novel complexes, trans-[Pd(CCPh)(NCNR)(PMe₃)₂] (R = 2,6-Me₂C₆H₃ (4) or 2,6-Et₂C₆H₃ (5)) and trans-[Pd(CCR)(CN₄-t-Bu)L₂] (6: L = PMe₃, R = Ph; 7: L = PEt₃, R = C(O)OMe; 8: L = PMe₃, R = C(O)OMe), which contain either a carbodiimido or a C-coordinated tetrazolato group. Reactions of compounds 1 and 2 with R-NCS (R = 2,6-Me₂C₆H₃ or CH₂CH₃) and 1,4-phenylene diisothiocyanate (C₆H₄(NCS)₂) smoothly proceeded to give tetrazole-thiolato complexes, trans-[Pd(CCPh)(SCN₄-R)L₂] (L = PMe₃, R = Et (9) or 2,6-Me₂C₆H₃ (10); L = PEt₃, R = 2,6-Me₂C₆H₃ (11)), and a phenylene-bridged dinuclear Pd(II) tetrazole-thiolato complex, [(PEt₃)₂(CCPh)Pd(SCN₄-(μ-C₆H₄)-SCN₄)Pd(CCPh)(PEt₃)₂] (12), respectively. Complexes 9-12 contain the Pd-S bond that is formed by the dipolar cycloaddition of the organic isothiocyanate to the Pd-azido bond. In contrast, the corresponding reactions of compounds 1and 2 with C₆F₅CN and Me₃SiCN (organic nitriles, R-CN) gave an N-coordinated Pd(II)-tetrazolato compound {trans-[Pd(CCPh)(N₄C-C₆F₅)(PMe₃)₂] (13)} and a mixture of Pd(II)-cyano complexes {trans-[Pd(CCPh)(CN)(PEt₃)₂] (14) and [Pd(CN)₂(PEt₃)₂] (15)}, respectively. Bis(phosphine) bis(cyano) complexes of Pd and Ni, [M(CN)₂L₂] (L = PEt₃, PMe₃; L₂ = DEPE), could be obtained independently by the reactions of [M(N₃)₂L₂] with excess Me₃SiCN in organic solvents.     

An investigation of the role of solutes in the xylem sap and in the xylem parenchyma as the source of root pressure

Summary Solute osmotic potentials (_x) in the vessels of hydroponically grown maize roots were measured to assess the osmotic-xylem-sap mechanism for generating root pressure (indicated by guttation). Solutes in vessels were measured in situ by X-ray microanalysis of plants frozen intact while guttating. Osmotic potentials outside the roots (_o) were changed by adding polyethylene glycol to the nutrient solution. Guttation rate fell when _o was decreased, but recovered towards the control value during 3–5 days when _o was greater than or equal to –0.3 MPa, but not when _o was equal to –0.4 MPa. In roots stressed to _o = –0.3 MPa, _x, was always more positive than _o, and _x changed only slightly (ca. 0.05 MPa). Thus the adjustment in the roots which increased root pressure cannot be ascribed to _x, contradicting the osmotic-xylem-sap mechanism. An alternative driving force was sought in the osmotic potentials of the vacuoles of the living cells (_v), which were analysed by microanalysis and estimated by plasmolysis. _v showed larger responses to osmotic stress (0.1 MPa). Some plants were pretreated with abundant KNO₃ in the nutrient solution. These plants showed very large adjustments in _v (0.4 MPa) but little change in _x (0.08 MPa). They guttated by 4 h after _o was lowered to –0.4 MPa. It is argued that turgor pressure of the living cells is a likely alternative source of root pressure. Published evidence for high solute concentrations in the xylem sap is critically assessed.Abbreviations _o external water potential - _x osmotic potential of xylem sap - _v osmotic potential of vacuolar sap - EDX energy dispersive X-ray microanalysis - CSEM cryo-scanning electron microscope - LN₂ liquid nitrogen - PEG polyethylene glycol     

Immunocytochemical study by two photon fluorescence microscopy of the distribution of GABA<Subscript>A</Subscript> receptor subunits in rat cerebellar granule cells in culture

Summary. An immunocytochemical investigation of the expression of ₁, ₆, _2/3, ₂ and subunits was performed on rat cerebellum granule cells in culture by the two photon microscopy technique.The first four subunits appear to be expressed abundantly in these cells, whereas the one seems to be expressed at a lower level. Another major difference in the distribution of these subunits is that whereas ₆, _2/3 and ₂ appear only on plasma membranes ₁ and are present mainly in the cell bodies cytoplasm. Still another difference was found in that the presence of ₂ on neurites is polarized, preferentially labelling neurites with the appearance of dendrites. The subunits ₆ and _2/3 appear to label all types of neurites, with _2/3 being by far the most heavily expressed subunit type. A final distinct characteristic is that ₆ and, even more, ₂ appear to accumulate in the cytoplasmic domains immediately below the cone of emergence of neurites. This suggests a conspicuous transport of such subunits from the site of synthesis in the cell body to the site of final expression in the neurites (dendrites and axon terminals).     

Light dependence of quantum yields of Photosystem II and CO2 fixation in C3 and C4 plants

The light dependence of quantum yields of Photosystem II (_II) and of CO₂ fixation were determined in C₃ and C₄ plants under atmospheric conditions where photorespiration was minimal. Calculations were made of the apparent quantum yield for CO₂ fixation by dividing the measured rate of photosynthesis by the absorbed light [A/I=_CO2 and of the true quantum yield by dividing the estimated true rate of photosynthesis by absorbed light [(A+R_l)/I_a=_CO2·], where R_L is the rate of respiration in the light. The dependence of the _II/_CO2 and _II/_CO2 ^* ratios on light intensity was then evaluated. In both C₃ and C₄ plants there was little change in the ratio of _II/_CO2 at light intensities equivalent to 10–100% of full sunlight, whereas there was a dramatic increase in the ratio at lower light intensities. Changes in the ratio of _II/_CO2 can occur because respiratory losses are not accounted for, due to changes in the partitioning of energy between photosystems or changes in the relationship between PS II activity and CO₂ fixation. The apparent decrease in efficiency of utilization of energy derived from PS II for CO₂ fixation under low light intensity may be due to respiratory loss of CO₂. Using dark respiration as an estimate of R_L, the calculated _II/_CO2 ^* ratio was nearly constant from full sunlight down to approx 5% of full sunlight, which suggests a strong linkage between the true rate of CO₂ fixation and PS II activity under varying light intensity. Measurements of photosynthesis rates and _II were made by illuminating upper versus lower leaf surfaces of representative C₃ and C₄ monocots and dicots. With the monocots, the rate of photosynthesis and the ratio of _II/_CO2 exhibited a very similar patterns with leaves illuminated from the adaxial versus the abaxial surface, which may be due to uniformity in anatomy and lack of differences in light acclimation between the two surfaces. With dicots, the abaxial surface had both lower rates of photosynthesis and lower _II values than the adaxial surface which may be due to differences in anatomy (spongy versus palisade mesophyll cells) and/or light acclimation between the two surfaces. However, in each species the response of _II/_CO2 to varying light intensity was similar between the two surfaces, indicating a comparable linkage between PS II activity and CO₂ fixation.Abbreviations A measured rate of CO₂ assimilation - A+R_L true rate of CO₂ assimilation; e - CO₂ estimate of electrons transported through PSII per CO₂ fixed by RuBP carboxylase - f fraction of light absorbed by Photosystem II - F'_m yield of PSII chlorophyll fluorescence due to a saturating flash of white light under steady-state photosynthesis - F_s variable yield of fluorescence under steady-state photosynthesis; PPFD-photosynthetic photon flux density - I_a absorbed PPFD - PS II Photosystem II - R_d rate of respiration in the dark - R_I rate of respiration in the light estimated from measurement of R_d or from analysis of quantum yields - apparent quantum yield of CO₂ assimilation under a given condition (A/absorbed PPFD) - true quantum yield of CO₂ assimilation under a given condition [(A+R_L)/(absorbed PPFD)] - quantum yield for photosynthetic O₂ evolution - electrons transported via PS II per quantum absorbed by PS II Supported by USDA Competitive Grant 90-37280-5706.     

Expression of α1-adrenergic receptor subtypes in heart cell culture

Three ₁AR subtypes have been cloned so far and are designated as _1a, _1b, and _1d. Organspecific distribution pattern and subtype-specific effects are known but not fully understood. To address a cell-type specific expression pattern in the heart we investigated expression pattern of ₁AR subtypes on RNA and proteinlevel in heart tissue, cultured cardiomyocytes and nonmyocytes of the rat. Each ₁ARsubtype mRNA was present in neonatal and adult rat heart culture but the relative distribution pattern was significantly different. While the _1aAR subtype is preferentially expressed in adult cardiomyocytes, the _1bAR subtype was preferentially expressed in the nonmyocyte cell fraction. The RTPCR results were confirmed by Westernblotting (_1b) and immunocytochemical studies. Incubation with an ₁agonist (phenylephrine) for 72 h led to a significant reduction of the _1bAR in neonatal heart cell culture on both mRNA and protein level. In contrast, incubation with an ₁antagonist (prazosin) induced a 1.6 fold upregulation of the _1aAR mRNA without significant effects on radioligand binding and functional assay. The results indicate a distribution pattern of the ₁AR subtype which is specific for cell type and ontogeny of the rat heart and may be regulated by adrenergic agents.     

Organometallic π-tweezers incorporating pyrazine- and pyridine-based bridging units

Pyrazine- and pyridine-based π-conjugated σ-donor molecules, such as 4,4′-bipyridine, 1,2-di(4-pyridyl)ethylene, 3,5-dipyridyl-1,2,4-triazole, N,N′-bis(4-pyridylmethylidene)benzene-1,4-diamine, 2,5-di(pyridylmethylidene)cyclopentanone, 2,6-di(4-pyridylmethylidene)cyclohexanone (LL, 2a-2g) can successfully be used to span heterobimetallic π-tweezer units of the type [{[Ti](μ-σ,π-CCSiMe₃)₂}M]⁺ ([Ti] = (η⁵-C₅H₄SiMe₃)₂Ti; M = Cu, Ag). The thus accessible di-cationic species [{[Ti](μ-σ,π-CCSiMe₃)₂}MLLM{(Me₃SiCC-μ-σ,π)₂[Ti]}]²⁺ (4), which are formed via the formation of [{[Ti](μ-σ,π-CCSiMe₃)₂}MLL]⁺ (3) complexes, can be isolated in yields between 66% and 99%.However, when C₅H₄NCHCHC₆H₄CHCHNC₅H₄ (5a) and C₅H₄NCHNC₆H₄CHCHNC₅H₄ (5b), respectively, are reacted with {[Ti](μ-σ,π-CCSiMe₃)₂}AgBF₄(1c) in a 1:1 molar ratio, then the silver(I) ion is released from the organometallic π-tweezer 1c and coordination polymers [AgBF₄ · 5a]_n (6a) and [AgBF₄ · 5b]_n (6b) along with [Ti](CCSiMe₃)₂ (7) are formed in quantitative yield.     

A new cumulene diiron complex related to the active site of Fe-only hydrogenases and its phosphine substituted derivatives: synthesis, electrochemistry and structural characterization

A new cumulene diiron complex related to the Fe-only hydrogenase active site [(μ-SCH₂C(S)CCH₂)Fe₂(CO)₆] (1) was obtained by treatment of (μ-LiS)₂Fe₂(CO)₆ with excess 1,4-dichloro-2-butyne. By controllable CO displacement of 1 with PPh₃ and bis(diphenylphosphino)methane (dppm), mono- and di-substituted complexes, namely [(μ-SCH₂C(S)CCH₂)Fe₂(CO)₅L] (2: L = PPh₃; 3: L = dppm) and [(μ-SCH₂C(S)CCH₂)Fe₂(CO)₄L₂] (4: L = PPh₃; 5: L = dppm) could be prepared in moderate yields. Treatment of 1 with bis(diphenylphosphino)ethane (dppe) afforded a double butterfly complex [(μ-SCH₂C(S)CCH₂)Fe₂(CO)₅]₂(μ-dppe) (7). With dppm in refluxing toluene, a dppm-bridged complex [(μ-SCH₂C(S)CCH₂)Fe₂(CO)₄(μ-dppm)] (6) was obtained. These model complexes were characterized by IR, ¹H, ³¹P NMR spectra and the molecular structures of 1, 2 and 5-7 were determined by single crystal X-ray analyses. The electrochemistry of 1-3 was studied and the electrocatalytic property of 1 was investigated for proton reduction in the presence of HOAc.     

Synthesis and characterization of triphenylphosphine stabilized silver α,β-unsaturated carboxylate: Crystal structure of [Ag(O2CCHC(CH3)2)(PPh3)2]

A series of triphenylphosphine coordinated silver α,β-unsaturated carboxylates of type [Ag(O₂CR)(PPh₃)_n: n = 1, R = CH₃CHCH (2a), (CH₃)₂CCH (2b), CH₃CH₂CHCH (2c), CH₃CH₂CH₂CHCH (2d), PhCHCH (2e), CH₂CH (2f); n = 2, CH₃CHCH (3a), (CH₃)₂CCH (3b), CH₃CH₂CHCH (3c), CH₃CH₂CH₂CHCH (3d)] were prepared by reaction of relative silver carboxylates (1a-1f) with triphenylphosphine in chloroform. These complexes were obtained in high yields and characterized by elemental analysis, ¹H NMR, ¹³C NMR, ³¹P NMR and IR spectroscopy. Thermal stability of the complexes has been determined by TG analysis. The molecular structure of [Ag((O₂CCHC(CH₃)₂))(PPh₃)₂] (3b) shows that the senecioato ligand is chelated with silver atom and generate, a distorted tetrahedron.     

Distance-constraint approach to protein folding. I. Statistical analysis of protein conformations in terms of distances between residues

A statistical analysis of protein conformations in terms of the distance between residues, represented by their C atoms, is presented. We consider four factors that contribute to the determination of the distanced _i,i+k between a given pair ofith and(i+k)th residues in the native conformation of a globular protein: (1) the distancek along the chain, (2) the size of the protein, (3) the conformational states of theith to(i+k)th residues, and (4) the amino acid types of the and(i+k)th residues. In order to account for the dependence on the distancek along the chain, the statistics are taken for three ranges, viz., short, medium, and long ranges (k8; 9k20; andk21; respectively). In the statistics of short-range distances, a mean distanceD _k and its standard deviationS _k are calculated for each value ofk, with and without taking into account the conformational states of all residues fromi toi+k (factors 1 and 3). As an Appendix, the relations for converting from the distances between residues into other conformational parameters are discussed. In the statistics of long-range distances, a reduced distanced* _ij (the actual distance divided by the radius of gyration) is used to scale the data so that they become independent of protein size, and then a mean reduced distanceD _l (a, a) and its standard deviation _l (a, a) are calculated for each amino acid pair (a, a) (factors 2 and 4). The effect of the neighboring residues along the chain on the value of the distanced* _ij is explored by a linear regression analysis between the actual reduced distanced* _ij and the mean value over theD _l for all possible pairs of residues in the two segments of the (i–2)th to the (i+2)th and the (j–2)th to the (j+2)th residues. The effect is assessed in terms of the tangentA _l (a, a) of the calculated regression line for each amino acid pair (a, a). In the statistics of medium-range distances, only factors 1 and 4 are considered, to simplify the analysis. The scaled distanced _i,i+k =(d _i,i+k -D _k )/S _k is used to eliminate the dependence onk, the distance along the chain. The propertiesD _m (a, a), _m (a, a) andA _m (a, a) corresponding toD _l (a, a), _l (a, a), andA _l (a, a), and also calculated for each amino acid pair (a, a). The results are interpreted as follows: the smaller values ofD _l (a, a) andD _m (a, a) indicate a preference of the pair (a, a) for a contact (e.g., pairs between hydrophobic amino acids, and pairs of Cys with aromatic amino acids), and the larger values of these quantities indicate a preference for distant mutual location (e.g., pairs between strong hydrophilic amino acids); the smaller values of _l (a, a) and _m (a, a) indicate a strong preference for either contact or noncontact (e.g., pairs between hydrophobic amino acids, and pairs between strong hydrophobic and hydrophilic amino acids, respectively), and the larger values of these quantities indicate the ambivalent/neutral nature of the preference for contact and noncontact (e.g., pairs containing Ser or Thr); the smaller values ofA _l (a, a) andA _m (a, a) indicate that the distance of an (a, a) pair is determined independently of the amino acid character of the neighboring residues along the chain (e.g., some pairs of Cys or Met with other amino acids) and the larger values of these quantities indicare that such amino acid character contributes strongly to the determination of the distance (e.g., pairs containing Ser or Thr, and pairs between amino acids with small side chains). The difference between the statistics for the long- and medium-range distances is also discussed; the former reflect the difference between the hydrophobic and hydrophilic character of the residues, but the latter cannot be easily interpretable only in terms of hydrophobicity and hydrophilicity. The data analyzed here are used in the optimization of an object function to compute protein conformation in a subsequent paper.     

Structure of F1-ATPases

F₁-ATPases are large multimeric proteins that can be isolated from the membrane bound system that catalyzes the phosphorylation of ADP by inorganic phosphate in bacteria, plants, and mitochondria. They can be visualized in electron micrographs of the inner mitochondrial membranes where they appear as large protruding spheres 90 Å in diameter. The purified F₁-ATPases have a molecular weight of 320,000 to 400,000 daltons and are composed of five non-identical subunits (, , , and ). The stoichiometry of these subunits in the complex is still unknown but compositions of the type ₃₃ and ₂₂₂₂₂ were found to be consistent with some of the available experimental data. This review discusses the recent data and the experimental approaches utilized for the structural characterization of F₁-ATPases.     

Genetic characterization of a new splice variant of the β2 subunit of the voltage-dependent calcium channel

This study reports a novel splice variant form of the voltage-dependent calcium channel ₂ subunit (_2g). This variant is composed of the conserved amino-terminal sequences of the _2a subunit, but lacks the -subunit interaction domain (BID), which is thought essential for interactions with the ₁ subunit. Gene structure analysis revealed that this gene was composed of 13 translated exons spread over 107 kb of the genome. The gene structure of the ₂ subunit was similar in exon-intron organization to the murine ₃ and human ₄ subunits. Electrophysiological evaluation revealed that _2a and _2g affected channel properties in different ways. The _2a subunit increased the peak amplitude, but failed to increase channel inactivation, while _2g had no significant effects on either the peak current amplitude or channel inactivation. Other subunits, such as ₃ and ₄, significantly increased the peak current and accelerated current inactivation.     

Partitioning and separation of α-lactalbumin and β-lactoglobulin in polyethylene glycol/ammonium sulphate aqueous two-phase systems

The partition behaviour of -lactalbumin (la) and -lactoglobulin (lg) on PEG/(NH₄)₂SO₄ system was studied. For purified proteins, a partition coefficient of 12.8 for la and 0.34 for lg, with mass recovery yields of 96.7% for la in the upper phase and 83.8% for lg in the lower phase was obtained, in 18% (w/w) PEG 900/14% (w/w) (NH₄)₂SO₄ system, at pH 7. PEG/(NH₄)₂SO₄ system was an economical alternative for the recovery and separation of the two proteins in cheese whey, allowing a 50% reduction in costs. An efficient and inexpensive separation of both proteins in cheese whey could be achieved, by using 16% (w/w) PEG 900/15% (w/w) (NH₄)₂SO₄, at pH 7.5.