Analysis of the main active ingredients and bioactivities of essential oil from <Emphasis Type="Italic">Osmanthus fragrans</Emphasis> Var. <Emphasis Type="Italic">thunbergii</Emphasis> using a complex network approach

Background

Osmanthus fragrans has been used as folk medicine for thousands of years. The extracts of Osmanthus fragrans flowers were reported to have various bioactivities including free radical scavenging, anti-inflammation, neuroprotection and antitumor effects. However, there is still lack of knowledge about its essential oil.

Methods

In this work, we analyzed the chemical composition of the essential oil from Osmanthus fragrans var. thunbergii by GC-MS. A complex network approach was applied to investigate the interrelationships between the ingredients, target proteins, and related pathways for the essential oil. Statistical characteristics of the networks were further studied to explore the main active ingredients and potential bioactivities of O. fragrans var. thunbergii essential oil.

Results

A total of 44 ingredients were selected from the chemical composition of O. fragrans var. thunbergii essential oil, and that 191 potential target proteins together with 70 pathways were collected for these compounds. An ingredient-target-pathway network was constructed based on these data and showed scale-free property as well as power-law degree distribution. Eugenol and geraniol were screened as main active ingredients with much higher degree values. Potential neuroprotective and anti-tumor effect of the essential oil were also found. A core subnetwork was extracted from the ingredient-target-pathway network, and indicated that eugenol and geraniol contributed most to the neuroprotection of this essential oil. Furthermore, a pathway-based protein association network was built and exhibited small-world property. MAPK1 and MAPK3 were considered as key proteins with highest scores of centrality indices, which might play an important role in the anti-tumor effect of the essential oil.

Conclusions

This work predicted the main active ingredients and bioactivities of O. fragrans var. thunbergii essential oil, which would benefit the development and utilization of Osmanthus fragrans flowers. The application of complex network theory was proved to be effective in bioactivities studies of essential oil. Moreover, it provides a novel strategy for exploring the molecular mechanisms of traditional medicines.

     

<Emphasis Type="Italic">Macrocystis integrifolia</Emphasis> and <Emphasis Type="Italic">Lessonia trabeculata</Emphasis> (Laminariales; Phaeophyceae) kelp habitat structures and associated macrobenthic community off northern Chile

Macrocystis integrifolia and Lessonia trabeculata form vast kelp beds providing a three-dimensional habitat for a diverse invertebrate and fish fauna off northern Chile. Habitat modifications caused by the El Niño Southern Oscillation (ENSO) are likely to alter the inhabiting communities. The aim of this study was to reveal relationships between distinct habitat structures of a M. integrifolia kelp bed, a dense L. trabeculata kelp bed and L. trabeculata patches colonizing a barren ground, and the associated dominant macrobenthic key species. Seasonally 15 sampling units (10 m² each) of any of the three habitats were monitored by SCUBA divers, which counted sporophytes and macroinvertebrates living between the latter. Furthermore, samples of plants were analysed in the laboratory to measure the morphological variables: total plant length, maximal holdfast diameter, stipe number, number of dichotomies per stipe, frond width and total drained wet mass. Multivariate analysis showed that the L. trabeculata kelp bed is denser, with a higher number of dichotomies per stipe, whereas sporophytes of M. integrifolia are longer with more stipes and wider fronds. Sporophytes of L. trabeculata patchily present on barren ground are shorter and have more stipes compared with those in the dense L. trabeculata kelp bed. Thus, the habitats provide different three-dimensional structures. The associated macrobenthic communities show a variable degree of overlapping; however, key faunal assemblages were distinguished for each habitat. Our study provides evidence that habitat diversity drives species diversity, the more homogeneous, monospecifically composed kelp bed habitats show comparatively low diversity, mainly caused by the dominance of the ascidian P. chilensis and T. tridentata in the M. integrifolia bed, and the mussel A. ater only present in the L. trabeculata bed. Species richness and diversity is highest in the heterogeneous habitat where L. trabeculata patches interrupt the barren ground. Our study revealed morphological differences between M. integrifolia and L. trabeculata kelp beds reflected in stipe number, plant length, dichotomies per stipe, and wet mass, which influence the composition of the associated characteristic fauna and its functional relations i.e. T. niger and T. tridentata.     

<Emphasis Type="Italic">Metschnikowia</Emphasis> mating genomics

Genes involved in mating type determination and recognition were examined in Metschnikowia and related species, to gather insights on factors affecting mating compatibility patterns among haplontic, heterothallic yeast species of the genus. We confirmed the universality of the special mating locus organisation found in Clavispora lusitaniae across and exclusive to the family Metschnikowiaceae (i.e., Metschnikowia and Clavispora). Timing of the divergence between idiomorphs was confirmed to coincide with the origin of the larger (CUG-ser) clade comprising the Debaryomycetaceae and the Metschnikowiaceae, exclusive of Cephaloascus fragrans. The sequence of the a mating pheromone is highly conserved within the large-spored Metschnikowia species, including Metschnikowia orientalis and Metschnikowia hawaiiana, but not Metschnikowia drosophilae or Metschnikowia torresii, which have a pattern of their own, as do other clades in the genus. In contrast, variation in α pheromones shows a more continuous, although imperfect correlation with phylogenetic distance as well as with in vivo mating compatibility.     

European <Emphasis Type="Italic">Hodophilus</Emphasis> (Clavariaceae,Agaricales) species with yellow stipe

Phylogenetic reconstruction of Hodophilus species with a yellow colour on the stipe based on nrITS, nrLSU and rpb2 sequences revealed six European species. All these species correspond to the widely accepted European concept of a single species Hodophilus micaceus. Four of these species are described and illustrated. H. micaceus and H. phaeoxanthus are recognised as two separate species and H. albofloccipes as a synonym of the latter. Two species, H. anatinus and H. cambriensis, are described as new. Possible endemism of H. micaceus and H. cambriensis to the British Isles is discussed. All analysed North American samples represent different species to those found in Europe. The North American species Hygrophorus rugulosus is combined in the genus Hodophilus. The preliminary key uses position and development of the yellow colour during maturation as the most important distinguishing character. The presence of the yellow colour is discussed as a possible synapomorphic character.     

Ants Associated with <Emphasis Type="Italic">Turnera subulata</Emphasis> (Turneraceae): Elaiosome Attraction,Seed Dispersion and Germination

Symbiosis between plants and ants include examples in which the plant provides shelter and/or food for ants that, in turn, act in the defense or in the dispersion of seeds from the host plant. Although traditionally referred as mutualistic, the results of these interactions may vary with the ecological context in which patterns are involved. A range of species have facultative association with Turnera subulata (Turneraceae). Here, using behavioral bioassays, we investigated the effects of the most frequent ant species associated with T. subulata (Brachymyrmex sp.1, Camponotus blandus (Smith), Dorymyrmex sp.1, Crematogaster obscurata Emery, and Solenopsis invicta Buren) in the dispersion of plant host seeds and in the number of seedlings around the associated ant nests. We also evaluated the effects of these ant species in the germination of T. subulata seeds, in the consumption of elaiosome, and in the attractiveness to elaiosome odor. Our results showed that the ant species associated with T. subulata presented variation in the attraction by the odor and in the rate of consumption of the elaiosomes. However, none of the ant species studied contributed significantly to the increase of seed germination and seedling growth. Our results suggest that the consumption of the elaiosome by ant species is not a determinant factor to the success of germination of T. subulata. However, such species could contribute indirectly to seed germination by carrying seeds to sites more fertile to germination. In general, our results help to elucidate the results of ecological interactions involving ants and plants.     

Two new <Emphasis Type="Italic">Entoloma</Emphasis> s.L. species with serrulatum-type lamellar edge from Changbai Mountains,Northeast China

Two species of Entoloma with serrulatum-type lamellar edge, E. cyanostipitum and E. subcaesiocinctum from the Changbai Mountains in northeast China, are described as new. E. cyanostipitum is distinguished by a brownish orange pileus with a central depression, black-blue lamellar edge, deep blue stipe, and cylindrical cheilocystidia with intense blue, intracellular pigment. E. subcaesiocinctum is characterized by a depressed pileus covered with brownish squamules, blackish blue lamellar edge, and cylindrical to clavate cheilocystidia with intense blue intracellular pigment. The two new species are further confirmed based on the ITS and nLSU sequences.     

<Emphasis Type="Italic">Halymenia johorensis</Emphasis> sp. nov. (Halymeniaceae,Rhodophyta), a new foliose red algal species from Malaysia

A new Halymenia species, Halymenia johorensis sp. nov., from southern Peninsular Malaysia is proposed based on plastid-encoded large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase (rbcL) gene analyses and detailed morphological observations. The new species is characterized by having (1) elliptical, oblong, or irregularly shaped blades, incised with some perforations, arising from a narrow-cuneate stipe attached to a discoid holdfast; (2) blades with a cartilaginous and gelatinous texture, a smooth to rugose surface, and irregularly dentate and cleft margins; and (3) isodiametric outer cortical cells and rounded to stellate inner cortical cells. RbcL sequence analyses have shown H. johorensis to be genetically distinct from other Halymenia species. Although H. johorensis is sister to Halymenia plana, these two species can be distinguished both molecularly and morphologically. Further studies are necessary to investigate the phylogenetic relationships and species diversity in this genus.     

Revision of the carabid genus <Emphasis Type="Italic">Meroctenus</Emphasis> Gemminger et Harold,with a new status of <Emphasis Type="Italic">Xenodochus</Emphasis> Andrewes (Coleoptera,Carabidae: Harpalini)

Originally described as a monotypical genus with unclear taxonomic position from Sudan, Meroctenus Gemminger et Harold, 1868 is treated as a polytypical genus of the Selenophori genus group with two subgenera: Meroctenus s. str. and Xenodochus Andrewes, 1941, stat. n. (the latter was previously considered a distinct genus). Within Meroctenus, two species are recognized: M. (Meroctenus) crenulatus Chaudoir, 1843 (type species) and M. (M.) mediocris (Andrewes, 1936), comb, n., transferred to Meroctenus s. str. from Xenodochus. A new subspecies M. (M.) crenulatus orientalis subsp. n. is described from Pakistan. Diagnoses of the genus Meroctenus in new interpretation as well as of its two subgenera are discussed, and a taxonomic review of the subgenus Meroctenus s. str. with a key to the species and subspecies is provided. The following synonymy is proposed: Meroctenus Gemminger et Harold, 1868 = Paregaploa Müller, 1947, syn. n.; Meroctenus crenulatus (Chaudoir, 1843) = Egaploa (Paregaploa) conviva Müller, 1947, syn. n. Lectotypes are designated for Ctenomerus crenulatus Chaudoir, 1843 and Xenodus mediocris Andrewes, 1936.     

A new <Emphasis Type="Italic">Maxillariella</Emphasis> (Orchidaceae: Maxillariinae) from Costa Rica and Panama

Maxillariella prostrata, a new species from Costa Rica and Panama is described and illustrated. This species is similar to M. acervata but differs in having a prostrate habit, elliptic leaves up to 2 cm long, pseudobulbs with two unequal apical leaves, one larger and the other smaller, a red-spotted lip, the column apex entire, and the pollinarium made up of two small globose pollinia on an oblong stipe. Maxillariella prostrata also resembles M. dichaeoides from Ecuador and Peru but differs in having yellow to white flowers spotted with red, and the lip with a well-defined callus.     

Three new species of <Emphasis Type="Italic">Russula</Emphasis> from South China

Russula lotus, R. nivalis, and R. purpureoverrucosa are proposed here as new taxa based on morphological and molecular evidences. The new species are described with illustration photographs and line drawings, and compared against related species. Morphologically, R. lotus (subgenus Heterophyllidia, section Heterophyllae, subsection Cyanoxanthinae) is characterized by a medium-sized basidioma with a pale pink to purplish pink pileus whose center area is yellowish white, white to cream white lamellae occasionally forked with lamellulae, a cream white smooth stipe, broadly ellipsoid to ellipsoid basidiospores ornamented with disconnected amyloid warts and inamyloid suprahilar plage, dispersed sulphovanillin (SV)-negative pileocystidia, and the pileipellis with suprapellis cells claw-assembled. Russula nivalis (subgenus Russula, section Russula, subsection Russula) is characterized by a very small pure white basidioma with a pileus 7–12 mm in diameter, abundant clavate pileocystidia and caulocystidia changing purplish red in SV, and broadly ellipsoidal to ellipsoid basidiospores ornamented with strongly amyloid warts and ridges interconnected by fine lines in an uncompleted or completed reticulum, mostly with inamyloid suprahilar plage. Russula purpureoverrucosa (subgenus Incrustatula, section Lilaceinae, subsection Lilaceinae) is characterized by a medium-sized basidioma with a red to grayish magenta pileus slightly areolate in small irregular warts from center to margin, a stipe with the same color and warts as the pileus, white to cream white occasionally forked lamellae with lamellulae, broadly ellipsoidal to ellipsoid basidiospores ornamented with amyloid warts and ridges rarely connected, abundant clavate pleurocystidia covered with thick yellowish incrustations, and the pileipellis with suprapellis cells a typical trichoderm, some of which covered with yellowish incrustations, pileocystidia absent. Phylogenetic analysis of nucleotide sequences of the internal transcribed spacer (ITS) region provided further evidence that the described species belong to the subsections above respectively, and represent new taxa.     

A review of the <Emphasis Type="Italic">Thinodromus lunatus</Emphasis> species-group (Coleoptera,Staphylinidae)

The Thinodromus lunatus species group is revised. The following new species are described: Thinodromus (s. str.) cattiensis sp. n. from Vietnam, Thinodromus (s. str.) forsteri sp. n. from southern Thailand, Thinodromus (s. str.) himalayensis sp. n. from Nepal and northern India, Thinodromus (s. str.) inconspicuus sp. n. from southern China, Thailand, and Vietnam, and Thinodromus (s. str.) spotus sp. n. from southern China. The following new synonymy is established: Thinodromus (s. str.) deceptor (Sharp, 1889) = Thinodromus (s. str.) gravelyi (Bernhauer, 1926), syn. n.; = Thinodromus (s. str.) reitterianus (Bernhauer, 1938), syn. n. Lectotypes are designated for Trogophloeus lunatus Motschulsky, 1857, Trogophloeus pustulatus Bernhauer, 1904, Trogophloeus socius Bernhauer, 1904, Trogophloeus sumatrensis Bernhauer, 1915, Trogophloeus lewisi Cameron, 1919, Trogophloeus gravelyi Bernhauer, 1926, Trogophloeus reitterianus Bernhauer, 1938, and Trogophloeus unipustulatus Cameron, 1941. A key is presented to all the species of the Thinodromus lunatus group.     

Cytogenetic analyses of eight species in the genus <Emphasis Type="Italic">Leptodactylus</Emphasis> Fitzinger, 1843 (Amphibia,Anura, Leptodactylidae), including a new diploid number and a karyotype with multiple translocations

Background

The karyotypes of Leptodactylus species usually consist of 22 bi-armed chromosomes, but morphological variations in some chromosomes and even differences in the 2n have been reported. To better understand the mechanisms responsible for these differences, eight species were analysed using classical and molecular cytogenetic techniques, including replication banding with BrdU incorporation.

Results

Distinct chromosome numbers were found: 2n = 22 in Leptodactylus chaquensis, L. labyrinthicus, L. pentadactylus, L. petersii, L. podicipinus, and L. rhodomystax; 2n = 20 in Leptodactylus sp. (aff. podicipinus); and 2n = 24 in L. marmoratus. Among the species with 2n = 22, only three had the same basic karyotype. Leptodactylus pentadactylus presented multiple translocations, L. petersii displayed chromosome morphological discrepancy, and L. podicipinus had four pairs of telocentric chromosomes. Replication banding was crucial for characterising this variability and for explaining the reduced 2n in Leptodactylus sp. (aff. podicipinus). Leptodactylus marmoratus had few chromosomes with a similar banding patterns to the 2n = 22 karyotypes. The majority of the species presented a single NOR-bearing pair, which was confirmed using Ag-impregnation and FISH with an rDNA probe. In general, the NOR-bearing chromosomes corresponded to chromosome 8, but NORs were found on chromosome 3 or 4 in some species. Leptodactylus marmoratus had NORs on chromosome pairs 6 and 8. The data from C-banding, fluorochrome staining, and FISH using the telomeric probe helped in characterising the repetitive sequences. Even though hybridisation did occur on the chromosome ends, telomere-like repetitive sequences outside of the telomere region were identified. Metaphase I cells from L. pentadactylus confirmed its complex karyotype constitution because 12 chromosomes appeared as ring-shaped chain in addition to five bivalents.

Conclusions

Species of Leptodactylus exhibited both major and minor karyotypic differences which were identified by classical and molecular cytogenetic techniques. Replication banding, which is a unique procedure that has been used to obtain longitudinal multiple band patterns in amphibian chromosomes, allowed us to outline the general mechanisms responsible for these karyotype differences. The findings also suggested that L. marmoratus, which was formerly included in the genus Adenomera, may have undergone great chromosomal repatterning.

     

New species of <Emphasis Type="Italic">Austroboletus</Emphasis> (Boletaceae) in Australia

Three new species of Austroboletus are described from Australia. Austroboletus austrovirens has been collected repeatedly in northern Queensland and the Northern Territory, and is primarily distinguished by its dry, green pileus and stipe ornamentation, and boletoid spores with meandering ridges and pits. Austroboletus viscidoviridis is known from southeastern coastal Queensland and Cape Tribulation; it is recognized by a glutinous-viscid, olive-green pileus, brown reticulum on the stipe, and amygdaliform spores with nodulose-tuberculate ornamentation. Austroboletus roseialbus has only been collected in eastern New South Wales and is characterized by a white pileus with subtle rosy tints, and flattened, white, lanose patches; the spores are amygdaliform with irregular alveolate-reticulate ornamentation.     

Two New Species of the Weevil Genus <Emphasis Type="Italic">Mecysmoderes</Emphasis> Schoenherr, 1837 (Coleoptera,Curculionidae: Ceutorhynchinae) from Vietnam

Two new species of the weevil genus Mecysmoderes Schoenherr, 1837 are described from Vietnam. Mecysmoderes (Enzoellus) vladimirisp. n. differs from the type species of Enzoellus and its allies from Thailand and Laos in the larger size, deeper meshes on the pronotum, broader legs and a velvety black sutural spot on the elytra. Mecysmoderes (Xenysmoderes) sergiisp. n. in the shape, coloration, and vestiture of the body is similar to M. consularis Pascoe, but clearly differs in the larger size, strongly and unevenly convex pronotal disc, swollen in the middle part elytra, and a dark scutellar spot.