Effect of mineral suspended matter on the productive characteristics of bacterioplankton and the degradation of labile organic materials

The effect of mineral particulate matter on the population of bacterioplankton, its aggregation, and productive characteristics was studied in model experiments with different concentrations of particulate kaolin and the same concentration of organic substance (sodium humate). It was found that the presence of mineral particulate matter stimulated the aggregation of bacterioplankton, improved bacterial production, and extended the productive period of bacterioplankton. The integral specific production of aggregated bacterioplankton was higher than that of free-swimming bacterioplankton. The energy metabolic coefficient K2 of bacterioplankton in the presence of mineral particulate matter was higher than in its absence.     

Relation entre habitat et peuplements de poissons: Essai de definition d'une methode numerique pour des rivieres nordiques

Estimates of primary production in relation to bacterioplankton growth kinetics have been made in three fish ponds with mono and polyculture in the Fish Farm Nivka, Kiev, USSR. Since the basic process of primary production is dependent upon such prevailing conditions as temperature, light and nutrient rather than upon the introduction of fish species, almost similar production rates were obtained in these ponds, with the variance ratio found not significantly different from zero (P > 0.05). So was the case with bacterioplankton growth kinetics (P > 0.05). A maximal gross production coupled with a bacterioplankton peak was demonstrated in the summer month of July with the rise of temperature of the water, while minimal production was observed in September. The effect of season was highly significant (P < 0.001) upon both primary production and bacterioplankton. Extreme deficiency of the net photosynthetic production of O₂ was observed in summer due to less prevalence of phytoplanktonic algae as a consequence of heavy grazing by the herbivorous fishes at the time of their active growth. A plot of biochemical oxygen demand as function of the respiratory loss of O₂ due t0 bacterial population showed a direct linear relationship (P < 0.001). Lack of definite correlation (P > 0.05) was indicated between the BOD and the total bacterioplankton population. There existed no definite relationship (P > 0.05) between primary production and bacterioplankton, perhaps because of the very low percentage of autotrophic photosynthetic bacteria and abundance of heterotrophic bacteria in the composition of total bacterioplankton.     

The Effect of Mineral Particulate Matter on the Productive Characteristics of Bacterioplankton and the Degradation of Labile Organic Material

The effect of mineral particulate matter on the population of bacterioplankton, its aggregation, and productive characteristics was studied in model experiments with different concentrations of particulate kaolin and the same concentration of organic substance (sodium humate). It was found that the presence of mineral particulate matter stimulated the aggregation of bacterioplankton, improved bacterial production, and extended the productive period of bacterioplankton. The integral specific production of aggregated bacterioplankton was higher than that of free-swimming bacterioplankton. The energy metabolic coefficient K ₂ of bacterioplankton in the presence of mineral particulate matter was higher than in its absence.     

Structural and functional characteristics of planktonic microbial communities of the Rybinsk Reservoir in the impact area of a large industrial center

In sites of the Rybinsk Reservoir with different levels of contamination by the municipal and industrial wastewater from the city of Cherepovets, the primary production of phytoplankton and the quantitative distribution of bacterioplankton, heterotrophic nanoflagellates, and viruses, as well as the content of finely disperse detritus, were investigated. The structural and functional characteristics of microbial communities form the contaminated sites were determined. Heterotrophic nanoflagellates were shown to play a major role in the consumption of bacterioplankton production.     

Control of marine bacterioplankton populations: Measurement and significance of grazing

A variety of methods have been used to estimate the degree of control exercised upon marine bacterioplankton by grazing organisms. These include filtration or dilution of samples to reduce grazers, the use of specific inhibitors to prevent growth or grazing, and the use of artificial particles or radio-labelled bacteria as tracers for the natural bacterioplankton. Each of these techniques has drawbacks which may lead to under- or overestimates of grazing. In addition, they tell us little about which organisms are doing the grazing or the degree to which viruses or lytic bacteria compete with grazers for bacterial production. Because measurements of grazing and bacterioplankton growth rates are uncertain, exact comparisons are not presently possible. Thus measurements of bacterial and bacterivore abundance, concentrated on comparisons between seasons, on diel cycles and on spatial variations, have been used to evaluate mechanisms controlling bacterial populations. These give an idea of the degree of coupling between bacterial growth and bacterivore activity and of the time scales over which growth and grazing balance. Combined with laboratory studies of grazing, they currently provide the best insight into what controls populations of bacteria in the sea.     

海水富营养化对海洋细菌影响的研究进展

综述了海水富营养化对海洋细菌影响的研究进展。随着海水富营养化程度的增加,海洋细菌数量或生物量增加;反硝化细菌、大肠菌群尤其是厌氧性的硫酸盐还原菌和产甲烷菌等典型细菌生理群数量增加;浮游细菌群落结构随富营养化递增趋于简单,物种多样性降低;富营养化也明显导致细菌群落正常功能活性的紊乱。海水富营养化对细菌群落的结构和功能有着深远的影响。     

Abundance and function of bacteria in the Southern Ocean.

The very low water temperatures existing in polar oceans that experience seasonal advance and retreat of pack ice do not inhibit the presence of large bacterial populations. Bacteria may contribute significantly to the energy transfers within the Southern Ocean. In the last decades, notable progress has been made in the knowledge of the role of marine bacteria in the Southern Ocean. A short overview of the abundance and function ofAntarctic marine bacteria is given, with respect to metabolic activity. The importance of spatial and temporal variability is described. The ecological function of Antarctic marine bacterioplankton is discussed. Depending on food web structure, bacteria may be either a link in food webs supporting metazoan production, or a sink where bacterial production is metabolised by microorganisms. In the more oligotrophic areas and during certain periods of the year bacterial biomass dominates phytoplankton. The microbial food web is therefore the dominant pathway for carbon and energy flow in Antarctic seawater.     

Structural and functional characteristics of the bacterioplankton of rivers flowing through a large city (Cherepovets,Upper Volga Region)

The structural and functional properties of the bacterioplankton in two small rivers and the Sheksna River that run through the large industrial city of Cherepovets were studied from April to October 2009–2011. The three-year average numbers and biomass of planktonic bacteria in small rivers were 18.7–18.8 million cells/mL and 3.5–4.9 g/m³, respectively; these values in the Sheksna River’s littoral zone were 15.8 million cells/mL and 2.2 g/m³. The bacterioplankton production in the small water courses exceeded that in the Sheksna River by a factor of 1.8–2.2. The contribution of bacterial filaments to the total biomass and the total bacterioplankton production increases in small polluted rivers.     

Production of Heterotrophic Bacterioplankton in a Large Meso-Eutrophic Reservoir: The Importance of Extracellular Organic Carbon Released by Phytoplankton

The spatial distribution and seasonal dynamics of heterotrophic bacterioplankton production have been studied and the value of autochthonous sources of substrates for bacteria has been evaluated in the pelagic zone of the meso-eutrophic Rybinsk Reservoir (the Upper Volga). During the vegetation period, the bacterial production ranges from 32 to 1352 (on average 444 ± 44) mg C/(m² × day). The total input of organic carbon from the processes of extracellular production of phytoplankton, viral lysis of prokaryotic cells, and feeding of protists provides 9–64% (32 ± 3% on average) of the daily carbon demand for heterotrophic bacterioplankton.     

深圳大鹏湾海域锥状斯氏藻赤潮期间细菌群落结构变化研究

目的:近年来,赤潮在我国的发生呈增加的趋势,并造成了极大的经济损失。过去研究赤潮发生的机理主要集中在理化因素的影响,而越来越多的证据表明仅凭借营养盐等环境因素并不能解释大部分赤潮现象,藻际微生物可能发挥着重要作用。本文跟踪观测了2010年7月深圳大鹏湾海域爆发的锥状斯氏藻赤潮生消过程中细菌群落丰度种类的变化,从微生物与赤潮藻相互作用的角度探讨了赤潮的生消过程,讨论了不同时期不同关键菌群的特殊作用,为解释赤潮爆发和消亡提供了新的视角,为赤潮的监控和防治新方法的建立奠定了理论基础。方法:本文按时间顺序共采集该赤潮9次样本,利用末端限制性酶切片段长度多态性分析(T-RFLP)等分子生物学方法,通过主成分分析、克隆文库的构建,研究了微生物群落的变化过程,并探讨了特定种属的微生物在赤潮发生、发展和消亡过程中的作用。结果:从浮游细菌丰度来看,随着锥状斯氏藻细胞数量的波动,浮游细菌总数也随之呈现相应的变化。从浮游细菌的种类来看,它们主要属于变形杆菌门(Proteobacteria)、拟杆菌门(Bacteroidetes)和厚壁菌门(Firmicutes)。从浮游细菌的动态变化过程来看,赤潮生消过程中,浮游细菌群落呈现出一定的演替现象,特别是在赤潮后期,群落主成分变化尤为显著。从关键菌群的作用来看,属于γ变形杆菌门的Alteromonas sp.一直占有较高的丰度,赤潮中后期受到菌群相互作用导致比例下降,而赤潮后期其他关键菌群的丰度的增高可能是导致赤潮消亡的重要原因。结论:本文利用T-RFLP这一DNA指纹技术分析微生物群落结构和多样性特征,通过研究赤潮生消过程中藻际浮游细菌群落的动态变化,发现随着赤潮的发展,浮游细菌群落发生着相应的变化。结果说明赤潮藻体丰度数量的改变影响着浮游细菌群落的组成。相对地,细菌群落的适应调整迅速造成赤潮藻体局部生长环境的改变,从而影响赤潮的发展过程。     

Seasonal Patterns of Planktonic Production in McMurdo Sound, Antarctica

The prolonged periods of continuous darkness and light in polarregions have resulted in a unique seasonal partitioning of primaryand heterotrophic production. In McMurdo Sound for example,the biomass, size distribution and production by phytoplanktonand bacterioplankton undergo distinct seasonal cycles. The seasonalpattern of primary production appeared to be regulated by lightwhereas the three order of magnitude change in phytoplanktonbiomass during mid- to late December was largely controlledby the advection of planktonic algae from the Ross Sea intoMcMurdo Sound. The size distribution of phytoplankton was highlyseasonal; nano- and picoplankton were dominant from August throughNovember while netplankton were more abundant in December andJanuary. Seasonal variations of bacterial biomass and productionwere smaller than those of phytoplankton. During the late australwinter and spring, bacterial biomass and production exceededthose of phytoplankton. This implies that during this period,organic material from allochthonous sources sustained bacterialgrowth. During the late spring and summer, however, the patternwas reversed and autochthonous primary production was sufficientto support concurrent bacterioplankton production. The apparenttemporal disequilibrium in autochthonous bacterioplankton andphytoplankton production was maintained by the seasonal inputof allochthonous organic material into McMurdo Sound. The factsthat a) bacteria were both abundant and highly active, b) bacterivorywas common among many of the endemic protozoa and some planktonicmetazoa and c) these bacterivores consumed >95% of the bacterialproduction strongly suggest that bacteria are a crucial componentin the transfer of energy and material to metazoans in polarregions.     

Heterotrophic organisms and viruses in the Oka River and Cheboksary Reservoir during the abnormally hot summer of 2010

In July 2010, abnormally high water temperature (25–29°C), as well as increased biomass and phytoplankton production caused intensive development of heterotrophic bacteria and heterotrophic nanoflagellates. It was found that the abundance, biomass, and production of heterotrophic bacterioplankton, as well as the abundance and biomass of heterotrophic nanoflagellates, and the number of planktonic viruses, which were calculated on average for the reservoir under study, turned out to be higher in the years with lower water temperature (20–23°C). The virus-induced mortality of bacterioplankton in the Oka River and the Cheboksary Reservoir averaged 25.4 ± 3.4 and 22.4 ± 2.7% of the daily bacterioplankton production.     

Bacterial diversity along a 2600 km river continuum

The bacterioplankton diversity in large rivers has thus far been under‐sampled despite the importance of streams and rivers as components of continental landscapes. Here, we present a comprehensive dataset detailing the bacterioplankton diversity along the midstream of the Danube River and its tributaries. Using 16S rRNA‐gene amplicon sequencing, our analysis revealed that bacterial richness and evenness gradually declined downriver in both the free‐living and particle‐associated bacterial communities. These shifts were also supported by beta diversity analysis, where the effects of tributaries were negligible in regards to the overall variation. In addition, the river was largely dominated by bacteria that are commonly observed in freshwaters. Dominated by the acI lineage, the freshwater SAR11 (LD12) and the Polynucleobacter group, typical freshwater taxa increased in proportion downriver and were accompanied by a decrease in soil and groundwater‐affiliated bacteria. Based on views of the meta‐community and River Continuum Concept, we interpret the observed taxonomic patterns and accompanying changes in alpha and beta diversity with the intention of laying the foundation for a unified concept for river bacterioplankton diversity.     

Distribution of viruses in the water column of the ice-covered Rybinsk Reservoir and their contribution to heterotrophic bacteria mortality

Virioplankton and bacterioplankton abundance has been determined in the pelagic and littoral zones of the Rybinsk Reservoir during the ice-covered period. The role of viruses in heterotrophic bacterioplankton infection and mortality is assessed. At water temperatures between 0.3 and 0.9°C, the number of planktonic virus particles and planktonic bacteria varies from 37.1 × 10⁶ to 84.1 × 10⁶ particles/mL, (57.3 ± 2.1) × 10⁶ particles/mL on average and from 2.50 × 10⁶ to 6.11 × 10⁶ cells/mL, (3.66 ± 0.16) × 10⁶ cells/mL on average, respectively. The ratio of the virus number to the bacteria number varies from 8.8 to 27.9, being 16.5 ± 0.7 on average. Visually infected cells comprise 0.3–0.5% (1.5 ± 0.2% on average) of the total number of bacterioplankton. Infected bacterial cells contain from 5 to 107 (17 ± 4 on average) mature virus particles. The average virus-induced mortality of bacteria accounts for 13.0 ± 1.9% (variations range from 2 to 55%) of the daily bacterial production, indicating that viruses play an important role in the regulation of bacterioplankton production and abundance in the Rybinsk Reservoir during the ice-covered period.     

Bacterio- and virioplankton in water bodies of a raised bog (Vologda oblast,Russia)

The abundance of virio-and bacterioplankton and the role of viruses in the mortality of heterotrophic bacteria have been studied in three different mire water bodies (lagg, hollow, and stream) in the Shichengskoe raised bog. The abundance of bacteria (up to 93 million cells/mL) and viruses (up to 152 million particles/mL) reached very high values. Considerable differences were found between the mire water bodies in seasonal dynamics and average values of the studied parameters. The ratio of the number of virioplankton to the number of bacterioplankton (median values from 1.3 in a hollow to 5.6 in a stream) is in low ranges of values which are available in literature sources. Viruses did not have a considerable direct effect on bacterioplankton while lysing ≤7.8% of the bacterial production.     

Bacterial quantity and microbial reactivity in Tugur bay of the Okhotsk Sea

The paper presents the results of investigation of the total abundance and the biomass of bacterioplankton, the abundance of heterotrophic bacteria, and the activity of microbiological processes involved in the carbon cycle in the water of the Bay of Tugur of the Sea of Okhotsk. In different regions of the bay, the total abundance of bacterioplankton was found to vary from 0.51 x 10(6) to 2.54 x 10(6) cells/ml; the bacterioplankton biomass, from 8.5 to 46.5 micrograms C/l; the abundance of heterotrophic bacteria, from 0.06 x 10(3) to 2.12 x 10(3) cells/ml; the bacterial assimilation of CO2, glucose, acetate, and protein hydrolysate, from 0.8 to 6.3, from 0.11 to 1.88, from 0.07 to 0.56, and from 0.01 to 0.22 mg C/(m3 day), respectively; the degradation of organic matter ranged from 28 to 221 mg C/(m3 day); and the intensity of methane oxidation, from 0.0005 to 0.17 microliter CH4/l. The spatial pattern and the functional characteristics of bacterioplankton in the Bay of Tugur were found to be dependent on the tidal dynamics.     

Effect or preliminary filtration on the functional characteristics of bacterioplankton from Lake Khanka]

The dependence of the functional characteristics of bacterioplankton from the loess of Lake Khanka on the pore size of filtering materials was investigated. Soluble organic matter (SOM), bacteria, and bacterial consumers adsorbed on particles suspended in the lake water were found to filter differently depending on the pore size of the filtering material. Filters with pore size 4.5 microns (filters II) retained up to 20% of SOM and 20-30% of bacterial cells. Filters III with pore size 2.87 microns retained almost 50% SOM and about 40% of bacteria. The double layer of gauze no. 72 (referred to as filter I) with pores size 40 microns was unable to completely retain bacterial consumers. In the case of filtrates I and II, the generation time of bacterioplankton decreased with its increasing average daily concentration. In the case of filtrate III, the generation time of bacterioplankton was minimum and did not depend on its concentration. Oxygen consumption rates per one bacterial cell and per unit biomass in filtrates increased with decreasing pore size of the filters through which they had passed. The bacterial biomass and oxygen consumption rate increased exponentially in filtrates III and logarithmically in filtrates I.     

象山港网箱养殖区与非养殖区的细菌群落分布

近海集约化养殖是导致我国近海污染的主要来源之一。浮游细菌在近海生态系统的物质循环过程中发挥重要作用,研究海洋浮游细菌群落对养殖活动的响应,对于指示和评价海水养殖生态系统健康具有重要意义。采集了象山港网箱养殖区与非养殖区3个深度,包括表层(0.5 m)、中层(2.5 m)、底层(8.0 m)的水样,利用焦磷酸测序技术测定16S rRNA基因,研究浮游细菌的群落结构和多样性。结果表明:网箱养殖活动不仅使得附近区域水体理化性质发生改变,如化学需氧量浓度显著高于非养殖区域,而且显著地(P0.05)改变了浮游细菌的群落结构,但不同深度间群落结构和多样性的差异不显著。网箱养殖区和非养殖区中主要浮游细菌类群为α-变形菌(Alphaproteobacteria)、γ-变形菌(Gammaproteobacteria)、拟杆菌(Bacteroidetes)、放线菌(Actinobacteria)、β-变形菌(Betaproteobacteria)、ε-变形菌(Epsilonproteobacteria)和其它变形菌(Unclassified Proteobacteria),占细菌总序列数的98.64%。有些细菌类群的平均相对丰度从网箱区到非养殖区差异显著,如拟杆菌(P0.01)和放线菌(P0.05)显著降低,而γ-变形菌(P0.05)显著增加。相似度分析表明γ-变形菌、α-变形菌和拟杆菌是造成网箱区和非养殖区群落差异的主要类群,对群落差异总贡献率达到45.02%。偏冗余分析表明,影响细菌群落分布的主要环境因子有化学需氧量、磷酸盐、铵盐和总有机碳,共解释38.18%的群落变异,空间距离单独解释10.66%的群落变异。实验结果表明,养殖活动导致浮游细菌群落的改变,其中拟杆菌、放线菌和γ-变形菌的丰度显著变化,可能用于评价养殖水体的水质状况。     

Phytoplankton and bacterioplankton production in a reed-covered water body

Between 1996 and 1998 phytoplanktonic primary production and bacterioplankton production were measured monthly at five sampling stations in the lower Kis-Balaton reservoir. The open water area of the reservoir was rich in phytoplankton and had hypertrophic characteristics, but inside the reed stand (80% of the surface area) phytoplankton biomass and production were substantially (30–50 times) lower. The algal removal efficiency of the lower Kis-Balaton reservoir was 96%. The reservoir had a considerably smaller effect on bacterioplankton removal than on the phytoplankton. The decrease of biomass and production of bacterioplankton in the through-flowing water was approximately 60%. Inside the reed stand the biomass and the production of planktonic bacteria exceeded that of the phytoplankton by several times, suggesting that the release of biodegradable dissolved organic (humic) substances from macrophytes stimulated the metabolism of bacterioplankton. The significant reduction of phytoplankton inside the dense reed stand was primarily the result of the shading effect of the reeds. In the open water area a shading experiment demonstrated that a 1-week residence period for planktonic algae in the reed-covered area was sufficient for their complete elimination. The decomposition of planktonic algae, reed material and the lack of primary production inside the reed stand created oxygen-deficient and phosphorus-rich conditions during the vegetative period. These results suggest that reed-covered water bodies can effectively retain suspended solids and planktonic algae, but because of decomposition processes they cannot retain biologically-available phosphorus.     

Coupling Between Rates of Bacterial Production and the Abundance of Metabolically Active Bacteria in Lakes, Enumerated Using CTC Reduction and Flow Cytometry

Abstract In natural bacterioplankton assemblages, only a fraction of the total cell count is active, and, therefore, rates of bacterial production should be more strongly correlated to the number of active cells than to the total number of bacteria. However, this hypothesis has seldom been tested. Herein we explore the relationship between rates of bacterial production (measured as leucine uptake) and the number of active bacteria in 14 lakes in southern Québec. Active bacteria are defined as those cells capable of reducing the tetrazolium salt CTC to its fluorescent formazan; these cells were enumerated using flow cytometry. Bacterial production varied two orders of magnitude in the lakes studied, as did the number of active bacteria, whereas the total number of bacteria varied by only sixfold. The number and proportion of active bacteria were similar among lake strata, but rates of bacterial production were highest in the epilimnion and lowest in the hypolimnion. As expected, bacterial production was better correlated to the number of active cells, and bacterial growth rates calculated for active cells ranged from 0.7 to 1.8 day⁻¹, on average threefold higher than those calculated on the basis of total bacterial abundance. Growth rates scaled to active cells were, on average, similar among lake strata and did not show any pattern along a gradient of increasing chlorophyll concentration, so there was no systematic change of bacterial growth rates with lake productivity. In contrast, growth rates scaled to the entire bacterial assemblage were positively correlated to chlorophyll, were tenfold more variable among lakes than growth rates of active cells, and showed larger differences among lake strata. Scaling bacterial production to either the total number or the number of active cells thus results in very different patterns in bacterial growth rates among aquatic systems. Received: 12 July 1996; Accepted: 24 September 1996