ZOOSPOROGENESIS,MORPHOLOGY, ULTRASTRUCTURE,PIGMENT COMPOSITION,AND PHYLOGENETIC POSITION OF TRACHYDISCUS MINUTUS (EUSTIGMATOPHYCEAE,HETEROKONTOPHYTA)1

The traditional order Mischococcales (Xanthophyceae) is polyphyletic with some original members now classified in a separate class, Eustigmatophyceae. However, most mischococcalean species have not yet been studied in detail, raising the possibility that many of them still remain misplaced. We established an algal culture (strain CCALA 838) determined as one such species, Trachydiscus minutus (Bourr.) H. Ettl, and studied the morphology, ultrastructure, life cycle, pigment composition, and phylogeny using the 18S rRNA gene. We discovered a zoosporic part of the life cycle of this alga. Zoospore production was induced by darkness, suppressed by light, and was temperature dependent. The zoospores possessed one flagellum covered with mastigonemes and exhibited a basal swelling, but a stigma was missing. Ultrastructural investigations of vegetative cells revealed plastids lacking both a connection to the nuclear envelope and a girdle lamella. Moreover, we described biogenesis of oil bodies on the ultrastructural level. Photosynthetic pigments of T. minutus included as the major carotenoids violaxanthin and vaucheriaxanthin (ester); we detected no chl c. An 18S rRNA gene‐based phylogenetic analysis placed T. minutus in a clade with species of the genus Pseudostaurastrum and with Goniochloris sculpta Geitler, which form a sister branch to initially studied Eustigmatophyceae. In summary, our results are inconsistent with classifying T. minutus as a xanthophycean and indicate that it is a member of a novel deep lineage of the class Eustigmatophyceae.     

COMPARATIVE MORPHOLOGY OF THE CARPEL IN THE ROSACEAE. V. POMOIDEAE: AMELANCHIER,ARONIA, MALACOMELES,MALUS, PERAPHYLLUM,PYRUS, SORBUS

The carpels of 2 groups of pomoid genera, Amelanchier, Malacomeles, Peraphyllum and Aronia, Malus, Pyrus, and Sorbus, were analyzed morphologically. Open sutures are associated with a lesser extent of tegumentary fusion and ovular bundle–wing bundle fusion than are closed sutures. However, in the genera as a whole (and particularly in Aronia and Sorbus), the extent of sutural closure is inversely related with the amount of intercarpellary adhesion and with the fusion of carpels to the floral cup. In the Amelanchier group and in Malus and Pyrus, ovular- and wing-bundle fusion is directly related with intercarpellary adhesion. Malus and Pyrus have closer structural resemblances with one another than they have with Aronia and Sorbus.     

Oreonectes guilinensis (Teleostei,Cypriniformes, Nemacheilidae), a new loach species from Guangxi,China

A new loach Oreonectes guilinensis sp. nov. is described from Guangxi Zhuang Autonomous Region, China. It is the second surface-dwelling fish identified in the genus Oreonectes after the type species Oreonectes platycephalus. This new species can be distinguished from other species within the genus by the combination of the following features: a round caudal fin, 13–14 branched rays, an incomplete lateral line with 4–6 pores, a short pelvic fin located some distance from the anus, a scale-covered body, a stout build (body width 14.0%–16.7% of standard length), a posterior chamber of well-developed airbladder and a yellowish-brown body with a lateral dark brown strip. The maximum likelihood phylogenetic analysis based on cytb gene recovered this new species in a well-supported clade with the type species O. platycephalus, sister to the Lefua clade. Morphological comparisons as well as our phylogenetic tree support Oreonectes shuilongensis, Oreonectes daqikongensis, Oreonectes jiarongensis as species of Troglonectes. Based on our results there are 6 valid species in the genus Oreonectes.     

Early Pleistocene Equus (Equidae,Perissodactyla) from Andersson Loc. 32 in Qixian,Shanxi, China

The Equus specimens of Andersson Loc. 32 in Qixian, Shanxi previously identified as Equus cf. sanmeniensis are rediscovered in this research. The skull has moderate size, deep nasal notch, clear preorbital fossa, undulated lateral outline, upper cheek tooth with simple fossette and incisor with incomplete cup, should be identified as Equus teilhardi. The mandible has cheek tooth with V-shaped linguaflexid, incisor with incomplete cup, moderate size, strong pli caballinid and deep ectoflexid on molar, should be identified as Equus qingyangensis. This skull is first record of a complete cranial material of E. teilhardi, reveals many important cranial features of E. teilhardi, supports anatomical comparison and phylogenetic discussion with other stenonid horses. The morphological differences between E. teilhardi and E. qingyangensis show their different niches, further explain the reason of their coexistence. Incomplete cup on incisor is an unstable feature. It has been found in several species of stenonid horses, likely a remaining feature derived from the most primitive Equus, Equus simplicidens. The small-sized stenonid horses with short limbs and incisors with incomplete cups likely have relation with E. teilhardi, such as Equus yunnanensis and Equus stehlini. E. qingyangensis has most primitive features in Eurasian stenonid horses.     

A sweetpotato SRD1 promoter confers strong root-, taproot-, and tuber-specific expression in Arabidopsis, carrot, and potato

Harvestable, starch-storing organs of plants, such as fleshy taproots and tubers, are important agronomic products that are also suitable target organs for use in the molecular farming of recombinant proteins due to their strong sink strength. To exploit a promoter directing strong expression restricted to these storage organs, we isolated the promoter region (3.0 kb) of SRD1 from sweetpotato (Ipomoea batatas cv. ‘White Star’) and characterized its activity in transgenic Arabidopsis, carrot, and potato using the β-glucuronidase (GUS) gene (uidA) as a reporter gene. The SRD1 promoter conferred root-specific expression in transgenic Arabidopsis, with SRD1 promoter activity increasing in response to exogenous IAA. A time-course study of the effect of IAA (50 μM) revealed a maximum increase in SRD1 promoter activity at 24 h post-treatment initiation. A serial 5′ deletion analysis of the SRD1 promoter identified regions related to IAA-inducible expression as well as regions containing positive and negative elements, respectively, controlling the expression level. In transgenic carrot, the SRD1 promoter mediated strong taproot-specific expression, as evidenced by GUS staining being strong in almost the entire taproot, including secondary phloem, secondary xylem and vascular cambium. The activity of the SRD1 promoter gradually increased with increasing diameter of the taproot in the transgenic carrot and was 10.71-fold higher than that of the CaMV35S promoter. The SRD1 promoter also directed strong tuber-specific expression in transgenic potato. Taken together, these results demonstrate that the SRD1 promoter directs strong expression restricted to the underground storage organs, such as fleshy taproots and tubers, as well as fibrous root tissues.     

Molecular phylogeny of moth flies (Diptera,Psychodidae, Psychodinae) revisited,with a revised tribal classification

Classification of Psychodinae has been a hotly contested topic in the taxonomic literature, with multiple mutually incompatible classifications proposed. Three main points of contention can be identified: (i) the validity of Maruinini Enderlein as a tribe‐level taxon and whether it forms a monophyletic group; (ii) the placement of subtribe Trichopsychodina Ježek – specifically whether it belongs with Psychoda Latreille in Psychodini or with Paramormia Enderlein and Telmatoscopus Eaton in Paramormiini Enderlein or Mormiini Enderlein; and (iii) whether Mormia Enderlein is more closely related to Brunettia Annandale or Paramormia Enderlein and Telmatoscopus Eaton. In the present paper, these questions are investigated using a molecular phylogeny of sequences compiled from all previous molecular phylogenies relevant to Psychodinae, as well as some hitherto unpublished sequences. The resulting matrix comprised 5406 base pairs from six markers for 32 taxa, and when analysed using Bayesian inference it yielded a well‐resolved tree which was unambiguous for all previously contentious points: Maruinini sensu lato (including Setomimini) was resolved as a valid taxon, Trichopsychodina is rendered paraphyletic by Psychodini, and Mormia is not closely related to Brunettia , but instead closer to Telmatoscopus and Paramormia . A revised tribal classification of Psychodinae is proposed, recognizing the tribes Psychodini, Brunettiini, Maruinini and Pericomaini as well as 17 unplaced genera.     

Further studies of the sieve-element plastids of theCaryophyllales includingBarbeuia,Corrigiola, Lyallia,Microtea, Sarcobatus,andTelephium

The sieve-element plastids of 69 species of theCaryophyllales were investigated by transmission electron microscopy. All contained the specific subtype-P3 plastids characterized by a peripheral ring of protein filaments. The presence or absence of an additional central protein crystal and their shape being either polygonal or globular as well as the average sizes of the sieve-element plastids are useful features in the characterization of some families.—Barbeuia contains sieve-element plastids that confirm its placement within thePhytolaccaceae. Lyallia differs fromHectorella by including small starch grains in their sieve-element plastids, which otherwise by their globular crystals negate a closer connection to theCaryophyllaceae. The lack of a central protein crystal in its form-P3fs plastids placesMicrotea best within theChenopodiaceae. Sarcobatus, a so far uncontested member of theChenopodiaceae, contains form-P3cf plastids, i.e., including a central crystal not found elsewhere in this family.Telephium andCorrigiola, shifted back and forth betweenMolluginaceae andCaryophyllaceae, have form-P3cf(s) plastids with a polygonal crystal which favor their placement within theCaryophyllaceae.     

Localization of growth arrest-specific genes on mouse Chromosomes 1, 7, 8, 11, 13, and 16

Growth arrest in NIH3T3 cells is associated with increased expression of a variety of mRNAs, several of which have been isolated as cDNA clones. Six of these growth arrest-specific (Gas) genes were mapped by following the inheritance of DNA restriction fragment length variants (RFLVs) associated with them in panels of recombinant inbred (RI) strains of mice and in the progeny of backcrosses both between laboratory mouse strains and between a laboratory strain and Mus spretus. The six genes are unlinked. Gas-1 maps to Chromosome (Chr) 13, Gas-2 to Chr 7, Gas-3 to Chr 11, Gas-4 to Chr 16, Gas-6 to Chr 8, and Gas-10 to Chr 1.     

Oligocene Shorebird Footprints,Kandi, Ombilin Basin,Sumatra

Recent fieldwork in the Ombilin Basin of west-central Sumatra resulted in the discovery of two distinct types of avian footprints, both referable to the ichnogenus Aquatilavipes. The footprints were discovered in the Oligocene Sawahlunto Formation in a creek side outcrop near the Kandi Ombilin Mine. Aquatilavipes wallacei is a small species of Aquatilavipes (～ 19 mm wide; 27 mm long) with elongate third digits, wide total divarication angles (120–150°) and inwardly curved peripheral digits. Aquatilavipes ichnospecies A are also small traces (average 21 mm wide; 31 mm long) with elongate third digits and straight to slightly outwardly curved peripheral digits. These traces are similar in morphology to those of small modern shorebirds such as rails (Rallidae), sandpipers (Scolapacidae) or plovers (Charadriinae).

The Sawahlunto traces occur in very fine-grained to fine-grained sandstone characterized by low-relief current ripples, many of which exhibit mud-draping. A low diversity invertebrate trace fossil assemblage consisting of Arenicolites, Diplocraterion, Planolites, Monocraterion, Skolithos and Coenobichnus co-occurs with the bird footprints. This succession is interpreted as intertidal sand flats. Probe and peck marks preserved on the same bedding planes as the bird footprints support the interpretation that these birds occupied the Kandi intertidal flats for foraging purposes.     

New species of Thyasira, Mendicula, and Axinulus (Bivalvia, Thyasiroidea) from Sub-Antarctic and Antarctic waters

Three new thyasirid species from the Sub-Antarctic and Antarctic waters are described: Thyasira patagonica, Mendicula sudamericana, and Axinulus antarcticus. T. patagonica is characterized by its strong commarginal sculpture, shell as height as length or higher than long, posterior auricle delimited by a deep submarginal sulcus, and a long and sloping straight anterior half of dorsal margin. M. sudamericana distinguished by its longer than high shell outline, elongated tooth-like enlargement anterior to beak, gills with only one demibranch at each side, and foot with a marked heel. A. antarcticus has a minute, subquadrate shell, hinge with a small swelling anterior to beak, gills with a single demibranch, and the lateral body pouch elongated and almost smooth. The present study provides the first reliable record of thyasirids, with a single demibranch from the Southern Ocean. Moreover, characters for a better definition of Mendicula are provided.     

Structure,function, and biogenesis of SecY,an integral membrane protein involved in protein export

TheE. coli secY (prlA) gene, located in the operator-distal part of thespec ribosomal protein operon, codes for an integral membrane protein, SecY. The phenotypes of temperature-sensitive and cold-sensitive mutations insecY suggest that the SecY protein plays an essential rolein vivo to facilitate protein translocation, whereas theprlA mutations in this gene suggest that SecY may interact with the signal sequence of translocating polypeptides. SecY contains most probably six cytoplasmic and five periplasmic domains, as well as 10 transmembrane segments. Such membrane-embedded structure may confer the SecY protein a translocator function, in which it provides a proteinaceous pathway for passage of secreted as well as membrane proteins. Results obtained byin vitro analyses of the translocation reactions, as well as some new phenotypes of thesecY mutants, are consistent with this notion. Possible interaction of SecY with other secretion and chaperone-like factors is also discussed.     

Sleep,Diurnal Preference,Health, and Psychological Well-being: A Prospective Single-Allelic-Variation Study

Individual differences in sleep and diurnal preference associate with physical and mental health characteristics, but few genetic determinants of these differences have been identified. A variable number tandem repeat (VNTR) polymorphism in the PERIOD3 (PER3) gene (rs57875989) has been reported to associate with diurnal preference, i.e., preferred timing of waking and sleep. Here, the authors investigate in a prospective single-candidate genetic variant study whether allelic variation for this polymorphism associates also with reported actual sleep timing and sleep duration, as well as psychological and health measures. Six hundred and seventy-five subjects, aged 20 to 35 yrs, completed questionnaires to assess sleep and psychological and health characteristics and were genotyped for the PER3 VNTR. Homozygosity for the longer allele (PER3^5/5) of the VNTR was associated with increased morning preference, earlier wake time and bedtime, and reduced daytime sleepiness. Separate analyses of work and rest days demonstrated that the increase in time in bed during rest days was greatest in PER3^5/5 homozygotes. PER3 genotype modified the effects of sleep timing and duration on fluid intelligence and body mass index. Genotype was not associated with physical or psychological characteristics as assessed by the SF-36 Health Questionnaire, the General Health Questionnaire, the Big Five Inventory, the Behavioral Inhibition System–Behavioral Activation System scales, and the Positive and Negative Affect Scale, even though these measures varied significantly with diurnal preference as assessed by the Morningness-Eveningness Questionnaire. Whereas diurnal preference also predicts mental health and psychological characteristics, as well as sleep timing, the PER3 VNTR specifically affects measures of sleep timing and may also modify the effects of sleep on health outcome measures. (Author correspondence: a.lazar@surrey.ac.uk)     

Earliest record of Platychoerops (Primates,Plesiadapidae), a new species from Mouras Quarry,Mont de Berru,France

Plesiadapids are extinct relatives of extant euarchontans (primates, dermopterans, and scandentians), which lived in North America and Europe during the Paleocene and Early Eocene. The only genus of plesiadapid whose species are absent from Paleocene strata is Platychoerops. Further, Platychoerops is the only group found in sediments post‐dating the Paleocene‐Eocene boundary (PEB) by a substantial period of time based on large samples. It is also substantially different from other plesiadapids in dental features thought to reflect ecology. Its evolution has been linked to the rapid global climate change and faunal turnover marking the PEB. Platychoerops and Plesiadapis tricuspidens have been reconstructed as members of a single lineage by some authors. We describe a specimen (right p3‐m3) that we attribute to a new species, Platychoeropsantiquus, from the unequivocally Paleocene (MP6) Mouras Quarry of Mont de Berru, France. It has strong morphological affinities to Platychoerops daubrei yet co‐occurs with many specimens of Plesiadapis tricuspidens, as well as the plesiadapid Chiromyoides campanicus. The existence of a species of Platychoerops prior to the PEB decouples the evolution of Platychoerops from the climate change and faunal turnover event associated with the PEB. Furthermore, the co‐occurrence of Platychoerops with P. tricuspidens refutes the idea of a single lineage for these taxa. Instead, Platychoerops may be more closely related to North American Plesiadapis cookei (a previous alternate hypothesis). We suggest character displacement in a Paleocene immigrant population of P. cookei resulting from competition with sympatric P. tricuspidens, as a likely scenario for the evolution of Platychoerops. Am J Phys Anthropol, 2012. © 2012 Wiley Periodicals, Inc.     

Comparative mapping ofIGHG,IGHM, FES,andFOS in domestic cattle

The immunoglobulin genes have not been genetically characterized as thoroughly in cattle as in other mammals, particularly humans and mice. Comparative gene mapping in mammals suggests that the bovine immunoglobulin heavy chain genes,IGHG4 andIGHM might be syntenic with theFOS oncogene. Interestingly, however, when these genes were assigned to bovine syntenic groups utilizing a panel of bovine: hamster hybrid somatic cells,IGH genes were shown to be syntenic with theFES oncogene rather thanFOS. In this studyIGH andFES were assigned toBos taurus chromosome 21 whileFOS was assigned to chromosome 10. In addition, bovine-specific immunoglobulin-like sequences were observed in the hybrid somatic cells, and one, IGHML1, was mapped to bovine syntenic group U16. The probes used for somatic-cell mapping were also used to screen a small number of cattle of several different breeds for restriction fragment length polymorphisms.IGHG4 andIGHM were shown to be highly polymorphisms. whileFOS andFES were not. Address correspondence and offprint requests to: J. E. Womack.     

RNA interference of an antimicrobial peptide, gloverin, of the beet armyworm, Spodoptera exigua, enhances susceptibility to Bacillus thuringiensis

Gloverin is known to be an inducible antimicrobial peptide. This study reports a gloverin gene (Seglv) identified from the beet armyworm, Spodoptera exigua. Seglv encodes 175 amino acids with a signal peptide. Its amino acid sequence is highly homologous (>95%) to other known gloverins. Seglv was expressed from egg to adult stages even without immune challenge. Especially, in larval stage, it was expressed in all tested tissues, such as hemocyte, fat body, gut, and epidermis. However, the constitutive expression level was significantly elevated in response to bacterial challenge. Expression of a Toll gene was required for expression of Seglv. A recombinant Seglv protein was synthesized using a bacterial expression system and purified with an affinity chromatography. The recombinant protein showed a specific antibacterial activity against a Gram-positive bacterium, but no activity against a Gram-negative Escherichia coli. Injection of specific double stranded RNA (dsRNA) against Seglv could suppress its expression. Knockdown of Seglv expression induced a significant developmental retardation and resulted in hypotrophy pupae. The larvae treated with dsRNA were much more susceptible to Bacillus thuringiensis than the control larvae. These results suggest that Seglv acts as an antimicrobial peptide especially against Gram-positive bacteria including B. thuringiensis.     

Hyphydrini Sharp, 1882, nomen protectum and Actobaenidae Gistel, 1856, nomen oblitum(Coleoptera: Dytiscidae: Hydroporinae)

The genus name Echinopus Gattolliat, 2002 is preoccupied and therefore must be considered as unavailable. Modaechinopus gen. nov. is proposed as a replacement name with the two new combinations Madaechinopus giboni (Gattolliat, 2002) and M. minutus (Gattolliat, 2002).     

Is the egg size determining gene,Esd, on the W chromosome identical with the sex-linked giant egg gene,Ge, in the silkworm?

The presence of the egg size-determining (Esd) gene, which acts as a quantitative gene, on the W chromosome of the silkworm was revealed in a previous study by using two types of triploid females, ZZW and ZWW, (Kawamura, Genetica 76: 195–201). The females with the sex-linked giant egg (Ge) gene deposit eggs as large as those laid by tetraploids. If the Ge mutant is induced by translocation of a fragment of the W carrying Esd onto the Z by chance, the egg size increase in the Ge strain and in tetraploids may be easily explained by the double dose of Esd. The measurement of the length of the Z-W bivalent in oocytes showed that the Z of the Ge strain was much longer than that of the other strains which do not carry the Ge gene. The result suggests that the Ge gene is identical with the Esd on the W chromosome of the silkworm.     

The fossil record of Glypturus Stimpson, 1866 (Crustacea,Decapoda, Axiidea,Callianassidae) revisited,with notes on palaeoecology and palaeobiogeography

Abstract: The fossil record of the callianassid genus Glypturus (Decapoda, Axiidea) is re‐evaluated. Our systematic revision, both of extant and fossil taxa, is based on major cheliped morphology only, thus providing an important impetus for palaeontological studies. Both spination and tuberculation of chelipeds are herein considered of great taxonomic importance. Presence of spines on the upper margins of the merus and propodus and the lower margin of the carpus are significant for generic assignment, whereas the extent of tuberculation on lateral surfaces of the propodus is important for assignment at the species level. Altogether, four extant and six exclusively fossil species of Glypturus are recognized. Several extinct callianassid taxa are now transferred to the genus, namely Callianassa berryi, Callianassa fraasi, Callianassa munieri, Callianassa pugnax and Callianassaspinosa; Callianassa pseudofraasi is considered a junior synonym of C. fraasi. Based on a comparison of ecological preferences of extant representatives, the presence of Glypturus in the fossil record is considered to be linked with tropical to subtropical, nearshore carbonate environments of normal salinity. We argue that Glypturus is of Tethyan origin, with a stratigraphical range going as far back as the Eocene. Since then, the genus migrated both westwards and eastwards, establishing present‐day communities in the western Atlantic and Indo‐West Pacific which both comprise several distinct species. In the presumed area of origin, the genus does no longer occur today. The exlusively fossil (middle Eocene) genus Eoglypturus from Italy is considered closely related to Glypturus and is thus assigned to the subfamily Callichirinae as well.