Revision of the genus <Emphasis Type="Italic">Poromitra</Emphasis> (Melamphaidae): Part 3. Species of group <Emphasis Type="Italic">P. cristiceps: P. cristiceps P. nigrofulva,P. frontosa,P. nigriceps</Emphasis>

On a large collection of material, a revision of mesopelagic fish of the genus Poromitra (family Melamphaidae) belonging to the group of species P. cristiceps was performed. The most typical characteristic of this group is the structure of the praeoperculum, in which bony crests of the anterior margin are at an acute angle to each other and in the posterior angular part there is usually an unspined notch. In the paper, the validity of four species of this group that were previously considered synonyms of the cosmopolitan species P. crassiceps is restored. P. cristiceps inhabits the northern part of the Pacific Ocean (to the north of 25–30° N), P. nigrofulva and P. frontosa inhabit tropical waters of the eastern part of the Pacific Ocean, and P. nigriceps inhabits the northern part of the Atlantic Ocean, from Greenland to the Azorres.     

Revision of the genus <Emphasis Type="Italic">Melamphaes</Emphasis> (Melamphaidae): Part 3. Multirakered species: <Emphasis Type="Italic">M. suborbitalis,M. parini</Emphasis>, and <Emphasis Type="Italic">M. acanthomus</Emphasis>

In the third part of the revision of the genus Melamphaes Melamphaidae (Melamphaidae), we examine multirakered species (20 and more rakers at the first gill arch) with seven soft rays in the ventral fin that have a posttemporal (temporal) spine directed anteriorly-upwards, with 14–15 rays in the pectoral fin, and 11 (rarely 12) trunk vertebrae. M. suborbitalis inhabits the Atlantic Ocean (in the north up to 57°N, in the south, up to 40°S), the Indian Ocean (is known in its southwestern part), and the western part of the Pacific Ocean. There is no significant evidence on catches of this species in the eastern part of the Pacific Ocean. Apparently, M. suborbitalis is absent in the tropical waters of the oceans. Until recently, M. parini was known from the holotype caught in the Sea of Okhotsk. Two specimens of this rare species: from the central (the area of the Hawaiian Islands) and the northeastern part of the Pacific Ocean are reported. M. acanthomus is an endemic of the eastern part of the Pacific Ocean where it is known along the coasts of America from California to the northern coast of Chile (approximately between 33°N and 21°S).     

Revision of the genus <Emphasis Type="Italic">Melamphaes</Emphasis> (Melamphaidae). 5. Oligo-raker species: <Emphasis Type="Italic">M. indicus</Emphasis>, <Emphasis Type="Italic">M. eurous</Emphasis>, and <Emphasis Type="Italic">M. typhlops</Emphasis>

Three oligo-raker species (?19 rakers on the first gill arch) of the genus Melamphaes out of the “M. typhlops” group are considered. The validity of M. indicus Ebeling is restored. This species inhabits equatorial and tropical waters of the Indian Ocean and the western part of the Pacific Ocean. M. eurous sp. n., which is related to M. indicus, is described from equatorial waters of the eastern part of the Pacific Ocean. M. typhlops (Lowe) inhabiting the northern part of the Atlantic Ocean, from the equatorial zone about to 45° N, is redescribed.     

A revision of the genus <Emphasis Type="Italic">Podococcus</Emphasis> (<Emphasis Type="Italic">Arecaceae</Emphasis>)

Summary  A taxonomic revision of the palm genus Podococcus (Arecaceae) is presented. Two species are recognised: P. barteri, a species relatively widespread in a coastal band from Nigeria to the D. R. Congo and P. acaulis, a species previously considered conspecific to P. barteri, almost exclusively confined to Gabon. The taxonomic history, morphology, distribution and conservation status of the genus and each species are discussed     

Revision of the genus <Emphasis Type="Italic">Melamphaes</Emphasis> (Melamphaidae): 7. oligo-raker species: <Emphasis Type="Italic">M. danae</Emphasis> and <Emphasis Type="Italic">M. pumilis</Emphasis>

Two species, M. danae Ebeling and M. pumilis Ebeling, belonging to the species group “M. simus” are described in the final part of the revision of oligo-raker species of the genus Melamphaes (Melamphaidae) (≤19 gill rakers on the first gill arch). The species M. danae is distributed in the Indian and Pacific oceans between 30° N and 30° S. In the Pacific Ocean, it is known up to 112° W. The species M. pumilis is distributed in the North Atlantic between 17° and 45° N, and the main catches have been conducted in the western part of the ocean. In the eastern part of the ocean, the catches are registered up to 28° W. A key for the identification of 21 oligo-raker species of the genus Melamphaes is presented.     

Redescriptions of the Indo-Pacific atherinid fishes <Emphasis Type="Italic">Atherinomorus forskalii</Emphasis>, <Emphasis Type="Italic">Atherinomorus lacunosus</Emphasis>, and <Emphasis Type="Italic">Atherinomorus pinguis</Emphasis>

The Indo-Pacific marine atherinid fishes Atherinomorus forskalii (Rüppell, 1838), Atherinomorus lacunosus (Forster, 1801), and Atherinomorus pinguis (Lacepède, 1803) are redescribed as valid species based on the types and non-type specimens collected throughout the Indo-Pacific. They are similar to each other chiefly in having a wide midlateral band (almost the same or greater than the midlateral scale width), large mouth (posterior tip of upper jaw reaching to or beyond a vertical through anterior margin of pupil), and no distinct tubercle at the posterior end of the dentary. All three species are distinguishable from congeners by those characters. The three species have long been confused with each other or synonymized erroneously as a single species. Atherinomorus forskalii, known from the Red Sea and eastern Mediterranean, differs from Atherinomorus lacunosus and Atherinomorus pinguis in having conspicuous, large endopterygoid teeth, forming obvious tooth ridges. Atherinomorus lacunosus, widely distributed in almost the entire Indo-Pacific, from East Africa to Tonga, north to southern Japan, and south to northern Australia, differs from Atherinomorus pinguis in having a wider midlateral band (the lower margin reaching to almost the center of the fourth scale row at level of the anal fin origin vs. the lower margin reaching to the ventral end of the third scale row in Atherinomorus pinguis) and more numerous midlateral scales (40–44 vs. 38–41 in Atherinomorus pinguis). Atherina morrisi Jordan and Starks, 1906, Hepsetia pinguis mineri Nichols and Roemhild, 1951, Pranesus capricornensis Woodland, 1961, Pranesus maculatus Taylor, 1964, and Pranesus pinguis ruppelli Smith, 1965, are regarded as junior synonyms of Atherinomorus lacunosus. Atherinomorus pinguis is also widely distributed in the Indo-West Pacific, from East Africa to northern Australia and north to southern Japan. Atherina pectoralis Valenciennes, 1835, is considered a junior synonym of Atherinomorus pinguis. Supplementary material to this paper is available in electronic format at     

<Emphasis Type="Italic">Phuphanochloa,</Emphasis> a new bamboo genus (<Emphasis Type="Italic">Poaceae</Emphasis>: <Emphasis Type="Italic">Bambusoideae</Emphasis>) from Thailand

Summary  A new monotypic bamboo genus Phuphanochloa (Poaceae: Bambusoideae) from north-eastern Thailand is described, together with a new species, P. speciosa.     

A new species of <Emphasis Type="Italic">Brasiliomyces</Emphasis> (Erysiphaceae) on <Emphasis Type="Italic">Dalbergia cultrata</Emphasis> var. <Emphasis Type="Italic">cultrata</Emphasis> from Thailand

A powdery mildew fungus on leaves of Dalbergia cultrata var. cultrata (Fabaceae) collected at the Queen Sirikit Botanical Garden in northern Thailand is proven to be a new species of the genus Brasiliomyces and is described as B. chiangmaiensis sp. nov. with light and SEM micrographs. Differences in known Brasiliomyces species are discussed, and a key to species of this genus is provided.     

The Madagascan genus <Emphasis Type="Italic">Vaughania</Emphasis> is reduced to synonymy under <Emphasis Type="Italic">Indigofera</Emphasis> (<Emphasis Type="Italic">Leguminosae-Papilionoideae-Indigofereae</Emphasis>)

Summary  Eleven species comprising the Madagascan genus Vaughania are subsumed within the large pantropical genus Indigofera. Six new combinations are made; the remaining species were originally described in Indigofera.     

Mitogenomic analysis of the genus <Emphasis Type="Italic">Panthera</Emphasis>

The complete sequences of the mitochondrial DNA genomes of Panthera tigris, Panthera pardus, and Panthera uncia were determined using the polymerase chain reaction method. The lengths of the complete mitochondrial DNA sequences of the three species were 16990, 16964, and 16773 bp, respectively. Each of the three mitochondrial DNA genomes included 13 protein-coding genes, 22 tRNA, two rRNA, one O_LR, and one control region. The structures of the genomes were highly similar to those of Felis catus, Acinonyx jubatus, and Neofelis nebulosa. The phylogenies of the genus Panthera were inferred from two combined mitochondrial sequence data sets and the complete mitochondrial genome sequences, by MP (maximum parsimony), ML (maximum likelihood), and Bayesian analysis. The results showed that Panthera was composed of Panthera leo, P. uncia, P. pardus, Panthera onca, P. tigris, and N. nebulosa, which was included as the most basal member. The phylogeny within Panthera genus was N. nebulosa (P. tigris (P. onca (P. pardus, (P. leo, P. uncia)))). The divergence times for Panthera genus were estimated based on the ML branch lengths and four well-established calibration points. The results showed that at about 11.3 MYA, the Panthera genus separated from other felid species and then evolved into the several species of the genus. In detail, N. nebulosa was estimated to be founded about 8.66 MYA, P. tigris about 6.55 MYA, P. uncia about 4.63 MYA, and P. pardus about 4.35 MYA. All these estimated times were older than those estimated from the fossil records. The divergence event, evolutionary process, speciation, and distribution pattern of P. uncia, a species endemic to the central Asia with core habitats on the Qinghai-Tibetan Plateau and surrounding highlands, mostly correlated with the geological tectonic events and intensive climate shifts that happened at 8, 3.6, 2.5, and 1.7 MYA on the plateau during the late Cenozoic period.     

On species composition of northern pacific genera <Emphasis Type="Italic">Eurycope</Emphasis> and <Emphasis Type="Italic">Baeonectes</Emphasis> and Redescription of <Emphasis Type="Italic">E. ochotensis</Emphasis> Kussakin, 1979 (Crustacea,Isopoda)

Two northwestern Pacific species of the munnopsid subfamily Eurycopinae, Eurycope pavlenkoi Gurjanova, 1933 and E. ochotensis Kussakin, 1979 are transferred to the other genus of the subfamily, Baeonectes Wilson, 1982, on the basis of the following characteristics: short truncated epipod of maxilliped, broad rostrum without distinct margins, absence of a distomedial lobe of the article 1 of antenna 1, mandible with broad, rounded molar and long condyle and pereonites 5–7 fused dorsomedially. Based on the mentioned characters E. pygmaea G.O. Sars, 1870, which was put into the genus Tytthocope Wilson & Hessler, 1981 is also suggested to be transferred into the genus Baeonectes. After the clarification of the taxonomical position of the species, the geographical range of the genus Baeonectes expanded. In the Sea of Japan the genus was registered for the first time.     

Molecular analysis of the genus <Emphasis Type="Italic">Anoxybacillus</Emphasis> based on sequence similarity of the genes <Emphasis Type="Italic">recN</Emphasis>, <Emphasis Type="Italic">flaA</Emphasis>, and <Emphasis Type="Italic">ftsY</Emphasis>

Genome predictions based on selected genes would be a very welcome approach for taxonomic studies. We analyzed three genes, recN, flaA, and ftsY, for determining if these genes are useful tools for systematic analyses in the genus Anoxybacillus. The genes encoding a DNA repair and genetic recombination protein (recN), the flagellin protein (flaA), and GTPase signal docking protein (ftsY) were sequenced for ten Anoxybacillus species. The sequence comparisons revealed that recN sequence similarities range between 61% and 99% in the genus Anoxybacillus. Comparisons to other bacterial recN genes indicated that levels of similarity did not differ from the levels within genus Anoxybacillus. These data showed that recN is not a useful marker for the genus Anoxybacillus. A 550–600-bp region of the flagellin gene was amplified for all Anoxybacillus strains except for Anoxybacillus contaminans. The sequence similarity of flaA gene varies between 61% and 76%. Comparisons to other bacterial flagellin genes obtained from GenBank (Bacillus, Pectinatus, Proteus, and Vibrio) indicated that the levels of similarity were lower (3–42%). Based on these data, we concluded that the variability in this single gene makes it a particularly useful marker. Another housekeeping gene ftsY suggested to reflect the G+C (mol/mol) content of whole genome was analyzed for Anoxybacillus strains. A mean difference of 1.4% was observed between the G+C content of the gene ftsY and the G+C content of the whole genome. These results showed that the gene ftsY can be used to represent whole G+C content of the Anoxybacillus species.     

<Emphasis Type="Italic">Argyripnus boreopacificus</Emphasis> sp. nova,a new species of hatchetfishes (Sternoptychidae) from the subtropical Northwestern Pacific

A new species of the genus Argyripnus is described from the underwater elevations of the Northwestern Pacific. The species is most similar to A. hulleyi from the western Indian Ocean, but it differs in a larger number of rays of the dorsal and pectoral fins, a slightly larger number of photophores in the ventral row, and several other characters. The type series of the species is the most northern record of the representatives of the genus in the Pacific Ocean.     

Phylogenetic affiliation of <Emphasis Type="Italic">Choiromyces magnusii</Emphasis> and <Emphasis Type="Italic">C. venosus Tuberaceae Ascomycota</Emphasis>) from Spain

The only two species of Choiromyces collected up to now in Spain, C. venosus and C. magnusii, were studied with both morphological and molecular methods. Phylogenetic inference of nrDNA ITS and LSU sequences showed that they should be considered independent species in the genus Choiromyces. Choiromyces venosus is a hypogeous fungus, infrequent but naturally present in the Iberian Peninsula, that is imported into Spain from central Europe without any indication of its origin or proper taxonomic identification. It is usually sold as highly-prized edible species of the genus Tuber such as T. magnatum. Choiromyces magnusii is a more frequent hypogeous fungus in Spain that is commercialized in spring on a local scale together with different species in the genus Terfezia. Additionally, the Australian species Reddellomyces westraliensis, which was introduced with Eucalyptus camaldulensis plantations, is cited here for the first time in Spain and Europe.