New occurrence of the family Hipponicharionidae (Bradoriida, Arthropoda), in the lower and middle Cambrian of the Cadenas Ibéricas, Spain

The bradoriids Hipponicharion aff. hispanicum and Wimanicharion aff. matthewi are reported from the lower and middle Cambrian strata of the Cadenas Ibéricas, Spain. The genus Hipponicharion seems to be restricted to the Acadobaltic Province. Wimanicharion has been recorded from Sweden and Canada (Nova Scotia). The new discovery of Wimanicharion in Spain indicates its similar palaeobiogeographical distribution to Hipponicharion.     

Oceanic Anoxic Event at the Cenomanian–Turonian boundary interval (OAE-2): ichnological approach from the Betic Cordillera, southern Spain

Ichnological analysis of dark sediments of the Oceanic Anoxic Event at the Cenomanian–Turonian boundary interval (OAE-2) from the Betic Cordillera, southern Spain, reveals the presence of ichnofabrics containing trace fossils Chondrites isp., Palaeophycus heberti , Planolites isp., Thalassinoides isp., Trichichnus linearis , Zoophycos isp., and other bioturbational structures. Analysis of the ichnofabrics and trace fossil diversity allowed the reconstruction of relative oxygenation. Before the OAE-2, oxygenation of sediments was generally good, but it was punctuated by short anoxic events. During the OAE-2i, several longer anoxic intervals were interrupted by shorter dysaerobic and oxic periods. After the OAE-2, oxygenation improved and almost all trace fossils known before OAE-2 reappeared, although oxygenation dropped a few times to anoxia. Generally, the short oxygenation changes reveal a periodicity, which may suggest a Milankovitch control.     

Extinction and recovery patterns of scleractinian corals at the Cretaceous-Tertiary boundary

The extinction and recovery of scleractinian corals at the Cretaceous-Tertiary (K-T) boundary was analyzed based on a global database of taxonomically revised late Campanian to Paleocene coral collections. In contrast to earlier statements, our results indicate that extinction rates of corals were only moderate in comparison to other marine invertebrates. We have calculated a 30% extinction rate for Maastrichtian coral genera occurring in more than one stratigraphic stage and more than one geographic region. Reverse rarefaction suggests that some 45% of all coral species became extinct. Photosymbiotic (zooxanthellate) corals were significantly more affected by the extinction than azooxanthellate corals; colonial forms were hit harder than solitary forms, and among colonial forms an elevated integration of corallites raised extinction risk. Abundance, as measured by the number of taxonomic occurrences, had apparently no influence on survivorship, but a wide geographic distribution significantly reduced extinction risk. As in bivalves and echinoids neither species richness within genera nor larval type had an effect on survivorship. An indistinct latitudinal gradient is visible in the extinction, but this is exclusively due to a higher proportion of extinction-resistant azooxanthellate corals in higher-latitude assemblages. No significant geographic hotspot could be recognized, neither in overall extinction rates nor in the extinction of endemic clades.More clades than previously recognized passed through the K-T boundary only to become extinct within the Danian. These failed survivors were apparently limited to regions outside the Americas. Recovery as defined by the proportional increase of newly evolved genera, was more rapid for zooxanthellate corals than previously assumed and less uniform geographically than the extinction. Although newly evolved Danian azooxanthellate genera were significantly more common than new zooxanthellate genera, the difference nearly disappeared by the late Paleocene suggesting a more rapid recovery of zooxanthellate corals in comparison to previous analyses. New Paleocene genera were apparently concentrated in low latitudes, suggesting that the tropics formed a source of evolutionary novelty in the recovery phase.     

Cerium negative anomaly just before the Permian and Triassic boundary event — The upward expansion of anoxia in the water column

A negative excursion of Ce and a succeeding steep decline in δ¹³C found just before the Permian and Triassic boundary (PTB) of Julfa area offer a geochemical constraint on the cause of the mass extinction event of PTB. The geochemical studies of recent anoxic basins like the Black Sea strongly suggest that the Ce negative excursion of these carbonate platform sequence indicates the buildup of anoxic water in the offshore realm. The suboxic water mass associated with the Ce negative anomaly zone migrated and invaded into shallow carbonate shelf around 600 thousand years before the PTB. This was followed by an anoxic water mass without Ce anomaly, and resulted in a steep decline in δ¹³C and then mass extinction of marine shelf biota.     

Trend,signal and noise in the ecology of Ostracoda: information from rare species in low-diversity assemblages

Samples of Ostracoda from nearshore marine environments, where the water is more likely to be brackish or hypersaline, typically have low species diversity and are dominated by such species as Cyprideis torosa. In high-diversity samples from normal-marine environments, rare species are likely to contribute to environmental noise. Evaluation of low-diversity samples from Lake Manzala, Egypt, however, shows that the environmental signal provided by rare species can be masked by the overwhelmingly dominant species, C. torosa. In such instances, the dominant species should be removed from the data set and studies based on a large sample of the rare species.     

Growing and shrinking in the smallest tortoise, <Emphasis Type="Italic">Homopus signatus signatus</Emphasis>: the importance of rain

Climate change models predict that the range of the world’s smallest tortoise, Homopus signatus signatus, will aridify and contract in the next decades. To evaluate the effects of annual variation in rainfall on the growth of H. s. signatus, we recorded annual growth rates of wild individuals from spring 2000 to spring 2004. Juveniles grew faster than did adults, and females grew faster than did males. Growth correlated strongly with the amount of rain that fell during the time just before and within the growth periods. Growth rates were lowest in 2002–2003, when almost no rain fell between September 2002 and August 2003. In this period, more than 54% of the tortoises had negative growth rates for their straight carapace length (SCL), shell height (SH), and shell volume (SV); maximum shrinking for SCL, SH, and SV was 4, 11, and 12%, respectively. The shell of H. s. signatus has some flexibility dorso-ventrally, so a reduction in internal matter due to starvation or dehydration may have caused SH to shrink. Because the length and width of the shell seem more rigid, reversible bone resorption may have contributed to shrinkage, particularly of the shell width and plastron length. Based on growth rates for all years, female H. s. signatus need 11–12 years to mature, approximately twice as long as would be expected allometrically for such a small species. However, if aridification lowers average growth rates to the level of 2002–2003, females would require 30 years to mature. Additionally, aridification would lower average and maximum female size, resulting in smaller eggs and hatchlings. These projected life history responses to aridification heighten the threat posed by the predicted range contraction of this red-listed species. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Appendage Homologies and the First Record of Eyes in Platycopid Ostracods, with the Description of a New Species of Keijcyoidea (Crustacea: Ostracoda) from Japan

A median nauplius eye is reported for the first time in a platycopid ostracod, a group hitherto considered to be blind. A new species of the platycopid ostracod genus Keijcyoidea is described from coastal rocky marine habitats on the Pacific coast of Japan. Observations of living specimens in the laboratory show that it is capable of burrowing to a depth of several millimeters in sandy sediment, using the first two head appendages (antennulae and antennae) and the furca. Females brooded a maximum of five eggs in the posterior brood space of the carapace. The homologies and phylogenetic implications of the trunk segmentation and limbs are discussed, paying particular attention to the sexually dimorphic fifth and sixth limbs; the copulatory appendages of both sexes are interpreted as being attached to trunk segments T6–T7 (counting from the posterior; T1 = posteriormost segment).     

Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution

Genome sequencing has demonstrated that besides frequent small-scale duplications, large-scale duplication events such as whole genome duplications (WGDs) are found on many branches of the evolutionary tree of life. Especially in the plant lineage, there is evidence for recurrent WGDs, and the ancestor of all angiosperms was in fact most likely a polyploid species. The number of WGDs found in sequenced plant genomes allows us to investigate questions about the roles of WGDs that were hitherto impossible to address. An intriguing observation is that many plant WGDs seem associated with periods of increased environmental stress and/or fluctuations, a trend that is evident for both present-day polyploids and palaeopolyploids formed around the Cretaceous–Palaeogene (K–Pg) extinction at 66 Ma. Here, we revisit the WGDs in plants that mark the K–Pg boundary, and discuss some specific examples of biological innovations and/or diversifications that may be linked to these WGDs. We review evidence for the processes that could have contributed to increased polyploid establishment at the K–Pg boundary, and discuss the implications on subsequent plant evolution in the Cenozoic.     

Timing of diapause induction and its life‐history consequences in Nezara viridula: is it costly to expand the distribution range?

Abstract. 1. From the early 1960s to 2000 Nezara viridula (Heteroptera: Pentatomidae) expanded its range northwards in Japan and reached Osaka following climate warming recorded in the region. 2. The timing of diapause induction and its effect on life‐history traits were studied under quasi‐natural conditions in Osaka. Egg masses were placed outdoors in six series in July–November 1999. Developmental events were monitored until September 2000. 3. Adult diapause was induced in September–October in agreement with the photoperiodic response obtained under laboratory conditions. Induction of diapause in early October ensured the highest winter survival. Nymphs that hatched after late September died by December–April showing that the species cannot survive winter in the nymphal stage. 4. Life‐history traits varied between the early (non‐diapause reproduction) and late (post‐diapause reproduction) series. Thus, non‐diapause females produced significantly fewer egg masses than did females that reproduced only after diapause. The timing of diapause induction strongly affected overwintering success and post‐diapause performance: females that became adults and entered diapause in October lived longer, had a longer period of oviposition, and produced more eggs in larger egg masses than females that attained adulthood and entered diapause in September. 5. Females from the early series reproduced until late November, although progeny from the late September eggs were destined to die during the winter. Pre‐winter reproduction of adults that emerged in mid‐September or later was a result of the imperfect timing of diapause induction. It is an ineffective allocation of resources and may be considered the ecological cost of range expansion. 6. To establish in the region, N. viridula will probably evolve a lengthening of the critical photoperiod of the diapause induction response. This will allow the species to enter diapause earlier and, thus, avoid maladaptive late‐autumn reproduction but, perhaps, increase the cost of diapause because of a possible adverse impact of pre‐winter high temperature conditions on overwintering.     

A 12 000-year record of environmental change in the Lomond Hills, Fife, Scotland: Vegetational and climatic variability

The Lomond Hills of Fife, an isolated upland area rising to over 500 m, provide an opportunity to investigate the effect of altitude on vegetation and climate in an area otherwise dominated by lower-lying land. The West Lomond site contains sediments of the Devensian Late-glacial period; they reveal a well-defined sequence of Bolling-Older Dryas-Allerod-Younger Dryas events, commencing ca. 12 190 radiocarbon years B.P. and a probable Amphi-Atlantic Oscillation between ca. 11 040 and 10 800 B.P. The Holocene record is constrained by low sediment input but does reveal a woodland presence at this altitude, dominated byBetula andCorylus. Size statistics forBetula pollen are presented and the implications of the vegetational and climatic record are discussed. The traditional view of a smooth progress towards more temperate conditions following the Younger Dryas is not supported; between 10 180 and 9120 B.P., three cooler periods are inferred, the earliest of which may belong to a terminal phase of the Younger Dryas. Comparative pollen ‘influx’ data strongly suggest thatQuercus,Ulmus andAlnus were not present locally. As a working hypothesis, it is suggested that the demise of woodland, from ca. 5950 B.P., was a result of exposure. Pollen indicative of human impact was probably derived from areas of lowland agricultural activity from ca. 5330 B.P. onwards.     

Palaeoenvironment and palaeoclimate of the Mousterian-Aurignacian transition in northern Iberia: the small-vertebrate assemblage from Cueva del Conde (Santo Adriano, Asturias)

The transition from the Middle Palaeolithic (Mousterian) to the Upper Palaeolithic (Aurignacian) has been one of the prominent themes in the archaeology of the European Palaeolithic for more than 20 years. One of the most controversial questions concerning this period is the extinction of the Neanderthals and their replacement by modern humans. In this context, Cueva del Conde, located in the northern part of the Iberian Peninsula, is an archaeo-palaeontological site that records the Mousterian to Aurignacian transition. It has been excavated since the beginning of the 20th century, first by the Conde de la Vega del Sella and systematically by a team from the University of Oviedo since 2001. Three main zones have been identified: the External Zone, dated to approximately 39 110 ± 520 BP (level N104); the Entrance Platform, dated between 38 250 ± 390 BP and 34 730 ± 500 BP; and Gallery A with a radiocarbon date of approximately 31 540 ± 400 BP (level N2a2). The small-vertebrate assemblages recovered from the water-screening of all sediment from the excavation campaigns represent at least 21 small mammal, amphibian and squamate taxa. The small-vertebrate associations in the three zones suggest a patchy landscape, dominated by humid meadows and woodland areas with the existence of water in the vicinity of the cave. The climate shows a more continental pattern during the Mousterian, though it was milder during the Aurignacian. The small vertebrates of the Cueva del Conde Mousterian and Aurignacian levels suggest a climate that differed from modern day temperatures, between −1.1 and −4.4 °C (mean annual temperature), placing these assemblages during Interstadials 9 to 7 (Is9 to 7).     

Climate change,boundary increase and elongation of a pre‐existing cline: A case study in Drosophila ananassae

During the past two to three decades, Drosophila ananassae, a warm adapted tropical species, has invaded low to mid altitude localities in the western Himalayas. Due to its cold sensitivity, this species had never been recorded from higher latitudes as well as altitudes in India to the 1960s. A latitudinal cline in this desiccation‐sensitive species corresponds with southern humid tropical localities rather than northern drier subtropical localities. An extension of its cline into lowland to midland montane localities has resulted due to global climatic change as well as local thermal effects through anthropogenic impact. However, D. ananassae populations at species borders are characterized by lower genetic variability for body melanization as well as for desiccation resistance. There is a lack of thermal plastic effects for body melanization, and the observed extended cline might represent evolutionary (genetic) response due to selection pressure imposed by drier habitats. A comparison of fecundity, hatchability and viability at three growth temperatures (17, 20 and 25°C) showed significant reduction in trait values at 17°C in D. ananassae. Thus, its recent range expansion into northern montane localities might involve genetic effects on stress‐related traits and plastic effects on life history traits. We suggest that D. ananassae could serve as an indicator species for analyzing range expansion under changing climatic conditions.     

Species richness of woody plants in the landscapes of Central Spain: the role of management disturbances,environment and non‐stationarity

Questions: How important is management disturbance on gamma species richness of woody plants at intermediate landscape scales? How is species richness related to other climatic and biotic factors in the study area? How does the assumption of spatial stationarity affect assessment of relationships among species richness and explanatory variables (e.g. management, biotic and climatic factors) across extensive study areas? Location: Central Spain (regions of Castilla y León, Madrid and Castilla‐La Mancha). Scale: Extent: 150 000 km². Grain: 25 km² (5 × 5‐km cells). Methods: Information from 21 064 plots from the 3SNFI was used to evaluate richness of tree and shrub species at intermediate landscape scales. In addition to variables well known to explain biodiversity, e.g. environmental and biotic factors, effect of management treatments was evaluated by assessing clearcutting, selection cutting, stand improvement treatments and agrosilvopastoral systems (dehesas). Results from GWR techniques were compared with those from OLS regression. Results: Patterns of gamma species richness, although strongly affected by both environmental and biotic variables, were also significantly modified by management factors. Species richness increased with percentage of selection cutting stands and improvement treatments but decreased with percentage of clearcutting stands. Reduced species richness of woody plants was associated with agrosilvopastoral practices. Species richness for trees was closely related to basal area, annual precipitation and topographic complexity; species richness for shrubs was closely related to topographic complexity and agrosilvopastoral systems. Most relationships between species richness and environmental or biotic factors were non‐stationary. Relationships between species richness and management effects tended to be stationary, with a few exceptions. Conclusions: Landscape models of biodiversity in Central Spain were more informative when they accounted for effects of management practices, at least at intermediate scales. In the context of current rural abandonment, silvicultural disturbances of intermediate intensity increased gamma species richness of woody plants. Exclusion of factors such as agrosilvopastoral systems from models could have led to spurious relationships with other spatially co‐varying factors (e.g. summer precipitation). Patterns of spatial variation in relationships, provided by GWR models, allowed formulating hypotheses about potential ecological processes underlying them, beyond generalizations resulting from global (OLS) models.     

Minimal genomes,maximal productivity: comparative genomics of the photosystem and light-harvesting complexes in the marine cyanobacterium, <Emphasis Type="Italic">Prochlorococcus</Emphasis>

Although Prochlorococcus isolates possess the smallest genomes of any extant photosynthetic organism, this genus numerically dominates vast regions of the world’s subtropical and tropical open oceans and has evolved to become an important contributor to global biogeochemical cycles. The sequencing of 12 Prochlorococcus genomes provides a glimpse of the extensive genetic heterogeneity and, thus, physiological potential of the lineage. In this study, we present an up-to-date comparative analysis of major proteins of the photosynthetic apparatus in 12 Prochlorococcus genomes. Our analyses reveal a striking diversity within the Prochlorococcus lineage in the major protein complexes of the photosynthetic apparatus. The heterogeneity that has evolved in the photosynthetic apparatus suggests versatility in strategies for optimizing photosynthesis under conditions of environmental variability and stress. This diversity could be particularly important in ensuring the survival of a lineage whose individuals have evolved minimal genomes and, thus, relatively limited repertoires for responding to environmental challenges. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Characterization of γ-glutamyltranspeptidase in the liver of the frog: 2. Response to season,temperature and thyroid hormone in Rana pipiens

The impact of season and temperature on frog liver γ-glutamyltranspeptidase was assessed by measuring the activity of this enzyme in plasma membranes isolated from the livers of Rana pipiens obtained as summer and winter frogs; subjected to short-term (3 weeks) temperature acclimation; and subjected to multiple-temperature shifts. Plasma levels of T₃ were determined. γ-Glutamyltranspeptidase was found to be 2·2-fold higher in the summer frog relative to the winter frog; decreased by 44 percent in the summer frog by cold acclimation and increased by 1·7-fold in the winter frog by warm acclimation; and increased by 1·9-fold in the summer frog and 2·8-fold in the winter frog subjected to multiple-temperature shifts. Plasma T₃ levels were found to be 42-fold higher in the summer frog relative to the winter frog; decreased by 42 percent by cold acclimation and increased by 2·9-fold by warm acclimation; and decreased by 39 percent and 38 percent in the summer and winter frogs subjected to multiple temperature shifts. T₃ replacement during the last phase of the multiple-temperature shift protocol, restored the plasma T₃ levels to 75 percent of the control levels and prevented the increase evoked by the multiple-temperature shifts in γ-glutamyl-transpeptidase activity. Indeed, enzyme activity in the T₃ replaced state was 19 percent lower than in the control state. The involvement of thyroid hormone as a negative regulator of enzyme activity is discussed.     

Distribution of two species of sea snakes, <Emphasis Type=Italic>Aipysurus laevis</Emphasis> and <Emphasis Type=Italic>Emydocephalus annulatus</Emphasis>, in the southern Great Barrier Reef: metapopulation dynamics,marine protected areas and conservation

Aipysurus laevis and Emydocephalus annulatus typically occur in spatially discrete populations, characteristic of metapopulations; however, little is known about the factors influencing the spatial and temporal stability of populations or whether specific conservation strategies, such as networks of marine protected areas, will ensure the persistence of species. Classification tree analyses of 35 years of distribution data (90 reefs, surveyed 1–11 times) in the southern Great Barrier Reef (GBR) revealed that longitude was a major factor determining the status of A. laevis on reefs (present = 38, absent = 38 and changed = 14). Reef exposure and reef area were also important; however, these factors did not specifically account for the population fluctuations and the recent local extinctions of A. laevis in this region. There were no relationships between the status of E. annulatus (present = 16, absent = 68 and changed = 6) and spatial or physical variables. Moreover, prior protection status of reefs did not account for the distribution of either species. Biotic factors, such as habitat and prey availability and the distribution of predators, which may account for the observed patterns of distribution, are discussed. The potential for inter-population exchange among sea snake populations is poorly understood, as is the degree of protection that will be afforded to sea snakes by the recently implemented network of No-take areas in the GBR. Data from this study provide a baseline for evaluating the responses of A. laevis and E. annulatus populations to changes in biotic factors and the degree of protection afforded on reefs within an ecosystem network of No-take marine protected areas in the southern GBR. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.