Beetle assemblages in rainforest gaps along a subtropical to tropical latitudinal gradient

Successional processes in forest gaps created by tree falls are often considered a principal mechanism maintaining species diversity within forests. Although insects are important as mediators of forest recovery processes, there have been few observations of how they differ between forest gaps and non-gaps across latitudes. Here we tested the impacts of gap habitat on beetle assemblage composition at three locations spanning sub-tropical and tropical biomes (28°S, 16°S, 5°N: Lamington and Daintree in Australia, and Danum in Borneo). Beetles were collected by flight interception traps and sorted to family and feeding guilds. Despite clear differences in environmental conditions between gaps and non-gaps at all three location, we found weak and inconsistent differences in beetle family and feeding guild composition across a latitudinal gradient. PERMANOVA results showed no significant differences in beetle family and feeding guild composition between gaps and non-gaps. For beetle families, however, the interaction effect (between gap vs. non-gap treatment and location) was significant. Post-hoc analysis and NMDS ordinations showed significant and clear separation of family assemblages between gaps and non-gaps within the Danum samples but not within samples from either the Lamington or Daintree sites. Using IndVal, when all three locations were combined, Chrysomelidae and Tenebrionidae were found to be indicators for gaps and Scarabaeinae and Leiodidae for non-gaps. Analysed separately, gap indicators were only Chrysomelidae at Daintree, whereas non-gap indicators were Scarabaeinae at Lamington, Scarabaeinae, all other Scarabaeidae, Anthicidae, Scydmaeninae, and Hybosoridae at Danum. We suggest the scale of changes in insect composition and richness with the creation of a natural light gap in forests contrast with those resulting from anthropogenic disturbance such as logging and clearing of forests and the greater adaptability of forests to small-scale changes rather than large-scale changes.     

Light requirements of Australian tropical vs. cool-temperate rainforest tree species show different relationships with seedling growth and functional traits

Background and Aims

A trade-off between shade tolerance and growth in high light is thought to underlie the temporal dynamics of humid forests. On the other hand, it has been suggested that tree species sorting on temperature gradients involves a trade-off between growth rate and cold resistance. Little is known about how these two major trade-offs interact.

Methods

Seedlings of Australian tropical and cool-temperate rainforest trees were grown in glasshouse environments to compare growth versus shade-tolerance trade-offs in these two assemblages. Biomass distribution, photosynthetic capacity and vessel diameters were measured in order to examine the functional correlates of species differences in light requirements and growth rate. Species light requirements were assessed by field estimation of the light compensation point for stem growth.

Results

Light-demanding and shade-tolerant tropical species differed markedly in relative growth rates (RGR), but this trend was less evident among temperate species. This pattern was paralleled by biomass distribution data: specific leaf area (SLA) and leaf area ratio (LAR) of tropical species were significantly positively correlated with compensation points, but not those of cool-temperate species. The relatively slow growth and small SLA and LAR of Tasmanian light-demanders were associated with narrow vessels and low potential sapwood conductivity.

Conclusions

The conservative xylem traits, small LAR and modest RGR of Tasmanian light-demanders are consistent with selection for resistance to freeze–thaw embolism, at the expense of growth rate. Whereas competition for light favours rapid growth in light-demanding trees native to environments with warm, frost-free growing seasons, frost resistance may be an equally important determinant of the fitness of light-demanders in cool-temperate rainforest, as seedlings establishing in large openings are exposed to sub-zero temperatures that can occur throughout most of the year.     

The effects of rainforest canopy loss on arboreal dung beetles in Borneo: implications for the measurement of biodiversity in derived tropical ecosystems

We examine the effect of selective timber extraction, and corresponding forest canopy loss, on arboreal dung beetles in the tropical rainforests of Sabah, Malaysian Borneo. Changes in vertical distribution of beetles are measured through differences in the abundance of beetles in ground-based pitfall traps in primary, logged and plantation forest. Previous research has demonstrated that arboreal dung beetles are not generally collected in pitfall traps in primary forest, but are present in large numbers above the ground in canopy vegetation: the presence of arboreal beetles in pitfalls in areas of reduced or modified canopy cover may therefore reflect a response to the absence or modification of their usual habitat, and the proliferation of these beetles nearer to the ground. In this paper, statistically significant differences are found in the abundance of beetles in ground pitfall traps from logged forest compared to primary forest. Results show that virtually no arboreal dung beetles are recorded in primary forest traps, with an increased abundance of arboreal dung beetles in traps from logged and plantation forest, with 1.72% of the total number of arboreal beetles recorded from primary forest, 22.32% from logged forest, and 75.96% from plantation forest. The presence of arboreal dung beetles in plantations demonstrates that arboreal dung beetles can survive outside their normal habitat, and we relate these observations to adaptations to upper rainforest canopy conditions, and proliferation of these microclimatic conditions in man-made habitats. Results are also discussed in terms of their relevance to the measurement of species richness and diversity in logged and other derived ecosystems, where mixing of the ground-based and arboreal faunas occurs.     

Factors affecting litter processing by Anisocentropus kirramus (Trichoptera: Calamoceratidae) from an Australian tropical rainforest stream

• 1 Larvae of the caddisfly Anisocentropus kirramus are common leaf shredders in rainforest streams in tropical Queensland. Laboratory experiments were undertaken to examine the effects of (a) differences in leaf species, age and degree of conditioning, (b) leaf preferences, (c) temperature and (d) larval stage on processing of leaf litter by A. kirramus.
• 2 Leaf species (five tested), age (fresh v senescent) and condition (conditioned in stream v unconditioned) each had a significant effect on the amount of leaf material that was processed. For most species, conditioned leaves were processed faster but for one species unconditioned leaves were processed faster. Senescent leaves were processed more rapidly than green leaves in three species but not in the other two. Given a choice of leaf types A. kirramus actively selected leaves that were processed faster; no preference was shown between two different ‘fast’ leaves.
• 3 Processing occurred at all temperatures tested (10, 18 and 25°C), with the processing rate increasing with temperature. Younger instar larvae processed leaves at a greater rate per unit body weight (up to 343% day^?1) than older instars. Final instar (5) larvae were capable of processing some tough leaves that younger instars did not process.
• 4 In rainforest streams, processing of leaves by A. kirramus takes place throughout the year. Its ability to process green leaves is important because of the high input of fresh green leaves into tropical streams, and because of the severe depletion of the supply of conditioned leaves and fine detritus after floods.

     

The biodiversity of arthropods from Australian rainforest canopies: General introduction,methods, sites and ordinal results

Abstract The arthropod assemblages occurring in the canopies of tropical, subtropical and cool temperate sites have been sampled using a pyrethrum knockdown technique. Details of the techniques used and the climate and vegetation of the areas studied are presented together with an analysis of the distribution of individual arthropods across Orders. An approach using generalized linear modelling partitioned the variance in numbers among sites within forest types and across the three forest types. The effects of both these components were significant. The differences between the ordinal signatures of each forest type are discussed and a number of hypotheses proposed to account for these differences, based on knowledge of the biology of the groups concerned. For the tropical and subtropical sites a comparison was made between samples collected in the low to mid-canopy with ones collected in the high canopy. Numbers of both insects and non-insects collected differed significantly with height in the subtropical forest and the distribution of insects across Orders was also significantly different in this forest type. In the tropical forests numbers of insects differed significantly between the two strata but neither the numbers of non-insects nor the ordinal profiles of either insects or non-insects were shown to be significantly different.     

Anti-herbivore effects of an ant species,Crematogaster difformis,inhabiting myrmecophytic epiphytes in the canopy of a tropical lowland rainforest in Borneo

Ants are believed to regulate herbivorous insects in the canopy of tropical rainforests, but few studies have empirically investigated the anti-herbivore effects of the ants there. We examined the anti-herbivore effects of the ant species Crematogaster difformis, which territorializes a large area of the crown of emergent canopy trees and inhabits the myrmecophytic epiphytes, Lecanopteris sp. and Platycerium sp., which grow in the crown, by performing an ant-exclusion experiment in the field. The average proportion of leaf area loss, the proportion of damaged leaves, and the proportion of leaves with ≥50% leaf area loss were all significantly higher on experimentally ant-excluded branches than on ant-attended branches at 3 months from the beginning of the ant-exclusion treatment. These results suggest that C. difformis regulates not only herbivorous insects that potentially feed on its host epiphytes but also those that could feed on leaves of emergent canopy trees that harbor the epiphytes.     

Comparative phylogeography and speciation of dung beetles from the Australian Wet Tropics rainforest

In tropical rainforests, insects show especially high species richness and local endemism of species relative to vertebrates. One possible cause is that insects respond to historical fluctuations of rainforests on a smaller spatial scale than do vertebrates. To evaluate this hypothesis, we combine environmental niche models and mitochondrial DNA phylogeography for two pairs of sister species of the dung beetle genus Temnoplectron (T. aeneopiceum-T. subvolitans and T. politulum-T. reyi) from the rainforests of northeastern Australia, where climate-driven rainforest fluctuations in the Quaternary have strongly influenced genetic and species diversity of vertebrates. Within both species pairs, the bioclimatic niche was conserved, but the T. aeneopiceum-T. subvolitans species pair had the narrower environmental range, and thus more restricted potential distribution. Coalescent analyses indicated Late Pliocene or Early Pleistocene divergences for both species pairs, and earlier speciation in (T. aeneopiceum-T. subvolitans) than in (T. politulum-T. reyi). Phylogeographic structure in (T. aeneopiceum-T. subvolitans) was more pronounced than in (T. politulum-T. reyi), with significant isolation-by-distance in the former species-pair only. Nested clade and coalescence analyses indicated local range expansions for the T. aeneopiceum-subvolitans species pair and range-wide expansion for both T. politulum and T. reyi. We suggest that stronger phylogeographic structure and earlier divergence in (T. aeneopiceum-T. subvolitans) than in (T. politulum-T. reyi) reflects a stronger influence of environmental barriers to gene flow under the present climate and greater sensitivity to warmer and drier periods of the Quaternary. The two species pairs evidently responded to Quaternary rainforest fluctuations at spatial scales similar to those seen within low-vagility species of vertebrate. Despite this similarity of scale, these insect lineages are reproductively isolated at parapatric boundaries, whereas analogous lineages of vertebrates often are not. We suggest that rapid evolution of genitalia may facilitate geographic speciation in rainforest beetles.     

Cyclic changes in Turonian to Coniacian planktic foraminiferal assemblages from the tropical Atlantic Ocean

Abundance patterns of planktic and benthic foraminifera from a tropical Atlantic drill site (Ocean Drilling Program Site 1259, Demerara Rise, Suriname margin) display a pronounced 400 kyr cyclicity, uninterrupted throughout our  87.8–92 Ma record, between two clearly distinguishable assemblages: (1) a pelagic foraminifer fauna, which represents a deep oxygen minimum zone, and (2) another assemblage representing a shallow oxygen minimum zone where the foraminifer fauna is dominated by a higher diversity population of mostly small clavate and biserial species common in epicontinental seas. The cyclic changes in the long eccentricity band (400 kyr) between these two assemblages are proposed to reflect changes in the mean latitudinal position of the Intertropical Convergence Zone (ITCZ). Associated fluctuations in precipitation and trade wind strength may have influenced the upwelling regime at Demerara Rise leading to the observed cyclicity of planktic foraminiferal assemblages. The severe Turonian to Coniacian paleoclimatic and paleoceanographic changes in the Atlantic Ocean (e.g., gateway opening, cooling, and glaciation), however, seem to have no influence on the composition of tropical planktic foraminiferal faunas. There is no apparent relationship between foraminifer abundances and a major deflection in the stable isotope record interpreted elsewhere as a sign of the growth and decay of a large polar ice sheet.     

Molecular and morphological characterization of heterorhabditid entomopathogenic nematodes from the tropical rainforest in Brazil

Despite massive losses of primary forest, the Amazonian rainforest remains an extremely rich source of biodiversity. In recent years, entomopathogenic nematodes (EPNs) have been isolated from soil in various parts of the world and used successfully as biological control agents against numerous insect pests. Therefore, a sampling in the rainforest of Monte Negro, Rond?nia, Brazil was conducted with the aim of discovering new strains and/or species of EPNs for future development as biological control agents. From 156 soil samples taken at nine collecting sites, 19 isolates were obtained, all of them belonging to the genus Heterorhabditis. Four strains were subjected to detailed morphological and molecular evaluation. Based on morphometrics and internal transcribed spacer (ITS) sequence data, the strains LPP1, LPP2 and LPP4 were identified as Heterorhabditis indica, whereas LPP7 was considered Heterorhabditis baujardi. Comparative analysis of the ITS1 sequence of H. indica and H. baujardi isolates showed a polymorphic site for the restriction enzyme Tth 111 that could be used to distinguish the two species. Consequently, strains LPP1, LPP2, LPP3, LPP4, and LPP9 were identified as H. indica, whereas LPP5, LPP7, LPP8 and LPP10 were identified as H. baujardi.     

Acclimation of leaf carotenoid composition and ascorbate levels to gradients in the light environment within an Australian rainforest

The influence of the growth photon flux density (PFD) on the size and composition of the carotenoid pool and the size of the reduced ascorbate pool was determined across a light gradient from the forest floor to the canopy and the forest edge of a sub-tropical rainforest in New South Wales, Australia. Nineteen plant species (most collected from multiple sites) representing a broad taxonomic range consistently possessed larger total carotenoid pools when found growing in more exposed sites. There was a significant positive correlation between β-carotene content and growth PFD and a significant negative correlation between α-carotene content and growth PFD. Neoxanthin content exhibited no significant trend while the trend in lutein content varied with mode of expression. The pigments of the xanthophyll cycle (violaxanthin, antheraxanthin and zeaxanthin) exhibited the most pronounced response to growth PFD; they comprised a much greater portion of the total carotenoid pool in high light-acclimated plants. The pool of reduced ascorbate was also several-fold greater in high light-acclimated plants. These acclimatory changes in carotenoid and ascorbate content are consistent with a need for a greater capacity to dissipate excessive absorbed light energy in high light-acclimated plants.     

The amphibians of the relict Betampona low-elevation rainforest,eastern Madagascar: an application of the integrative taxonomy approach to biodiversity assessments

The Strict Nature Reserve of Betampona protects one of the last remaining relicts (about 2,228 ha) of low elevation rainforests in eastern Madagascar. Yet little has been previously published about the amphibian fauna of this rainforest. During 2004 and 2007, Betampona was surveyed over a total period of 102 days. Frogs were searched by opportunistic searching, pitfall trapping and acoustic surveys. The survey work confirmed the occurrence of 76 taxa, of which 36 are currently candidate species and about 30% were first considered as undescribed species. The identification of species included a multidimensional and integrative approach that links morphology, bioacoustics, ecology and genetics. Of these taxa, 24 species are potentially endemic to this low elevation eastern region. Considering the relatively small area of the Betampona forest, and its narrow elevational range, 76 amphibian species represents an unusually high richness compared to other sites in Madagascar. Although the eastern region is now largely deforested, our results reveal the importance of this relict forest, which is protecting a diverse amphibian fauna that includes many potentially endemic species.     

Isolation,structure elucidation and cytotoxic evaluation of endiandrin B from the Australian rainforest plant Endiandra anthropophagorum

Chemical investigations of the DCM extract from the roots of Endiandra anthropophagorum resulted in the isolation of a new cyclobutane lignan endiandrin B (1), together with the known natural products, endiandrin A (2), and (?)-dihydroguaiaretic acid (3). The structure of 1 was determined by extensive spectroscopic analyses, and confirmed by single crystal X-ray crystallography. Methylation of 1 using diazomethane afforded the previously reported natural product, cinbalansan (4). All compounds were evaluated for their cytotoxicity towards human lung carcinoma cells (A549) using high-content screening. (?)-Dihydroguaiaretic acid (3) was found to be the most potent cytotoxin against the A549 lung carcinoma cell line, with an IC₅₀ value of 7.49 μM.     

Quantitative analysis of the community structure of tropical amphibian assemblages and its significance to conservation

Amphibian community structure in five tropical sites was studied using dominance, diversity, evenness indices, niche breadth and overlapping scores and association analysis. Ten species of amphibians with average density/ha varying from 8 to 49 in different sites were collected.Rana limnocharis andBufo melanostictus were respectively the dominant amphibia in paddy fields and other sites. Niche breadth scores indicatedRana limnocharis, Bufo melanostictus andRana cyanophlyctis as habitat generalists indicating wide tolerance to environmental gradients. Five frog speciesi.e. Rana tigerina, Microhyla ornata, Ramanella variegata, Uperedon systoma andPolypedates maculatus were considered habitat specialists indicating narrow tolerance to environmental gradients. Niche breadth scores were found to be a function of the cumulative relative abundance value of different species. The niches ofRana limnocharis andRana cyanophlyctis, Bufo melanostictus andBufo stomaticus showed maximum overlapping.Rana tigerina showed maximum niche overlapping withRana variegata in paddy fields and withMicrohyla ornata when all sites were taken together. The coefficient of community index was maximum between the paddy fields and minimum between the paddy fields and forest site.Rana tigerina occurred very sparsely and analysis of data indicates that its population are threatened and require conservation measure.     

Studies with double cytokine-deficient mice reveal that highly polarized Th1- and Th2-type cytokine and antibody responses contribute equally to vaccine-induced immunity to Schistosoma mansoni.

A fundamental obstacle to vaccine development in schistosomiasis mansoni is a lack of understanding of what type of an immune response should be invoked. We have addressed this central issue by using the radiation-attenuated cercariae vaccine in mice genetically engineered to exhibit highly polarized type 1 (IL-10/IL-4-deficient) or type 2 (IL-10/IL-12-deficient) cytokine and Ab phenotypes. Our data show that while significant differences in immunity exist after a single vaccination with irradiated cercariae in double cytokine-deficient vs wild-type mice, these differences disappear after two vaccinations. The most important finding of these studies, however, was revealed in vaccinated IL-10-deficient mice. These mice developed a mixed and elevated type 1- and type 2-associated immune response and developed anti-schistosome immunity at levels equal to or better than those in wild-type mice. This immunity in IL-10-deficient mice correlated with higher parasite-specific Ab titers, greater proliferative capacity of lymphocytes, increased frequency of IFN-gamma- and IL-4-secreting cells, elevated perivascular/peribronchial inflammatory responses in the lung, and greater in vitro schistosomulacidal capacity of parasite Ag-elicited cells. These results suggest that optimal vaccine-induced immunity against schistosomes is linked not to the development of a highly polarized response, but, rather, to the induction of both type 1- and type 2-associated immune responses.     

A global model of the response of tropical and sub-tropical forest biodiversity to anthropogenic pressures

Habitat loss and degradation, driven largely by agricultural expansion and intensification, present the greatest immediate threat to biodiversity. Tropical forests harbour among the highest levels of terrestrial species diversity and are likely to experience rapid land-use change in the coming decades. Synthetic analyses of observed responses of species are useful for quantifying how land use affects biodiversity and for predicting outcomes under land-use scenarios. Previous applications of this approach have typically focused on individual taxonomic groups, analysing the average response of the whole community to changes in land use. Here, we incorporate quantitative remotely sensed data about habitats in, to our knowledge, the first worldwide synthetic analysis of how individual species in four major taxonomic groups—invertebrates, ‘herptiles’ (reptiles and amphibians), mammals and birds—respond to multiple human pressures in tropical and sub-tropical forests. We show significant independent impacts of land use, human vegetation offtake, forest cover and human population density on both occurrence and abundance of species, highlighting the value of analysing multiple explanatory variables simultaneously. Responses differ among the four groups considered, and—within birds and mammals—between habitat specialists and habitat generalists and between narrow-ranged and wide-ranged species.     

Late-stage canopy tree species with extremely low δ13C and high stomatal sensitivity to seasonal soil drought in the tropical rainforest of French Guiana

We assessed the daily time‐courses of CO₂ assimilation rate (A), leaf transpiration rate (E), stomatal conductance for water vapour (g_s), leaf water potential ( Ψ _w) and tree transpiration in a wet and a dry season for three late‐stage canopy rainforest tree species in French Guiana differing in leaf carbon isotope composition ( δ ¹³C). The lower sunlit leaf δ ¹³C values found in Virola surinamensis ( ? 29·9‰) and in Diplotropis purpurea ( ? 30·9‰), two light‐demanding species, as compared to Eperua falcata ( ? 28·6‰), a shade‐semi‐tolerant species, were clearly associated with higher maximum g_s values of sunlit leaves in the two former species. These two species were also characterized by a high sensitivity of g_s, sap flow density (Ju) and canopy conductance (g_c) to seasonal soil drought, allowing maintenance of high midday Ψ _w values in the dry season. The data for Diplotropis provided an original picture of increasing midday Ψ _w with increasing soil drought. In Virola, stomata were extremely sensitive to seasonal soil drought, leading to a dramatic decrease in leaf and tree transpiration in the dry season, whereas midday Ψ _w remained close to ? 0·3 MPa. The mechanisms underlying such an extremely high sensitivity of stomata to soil drought remain unknown. In Eperua, g_s of sunlit leaves was non‐responsive to seasonal drought, whereas Ju and g_c were lower in the dry season. This suggests a higher stomatal sensitivity to seasonal drought in shaded leaves than in sunlit ones in this species.     

Characterization of two substrains of Puumala virus that show phenotypes that are different from each other and from the original strain

Hantaviruses, the causative agents of two emerging diseases, are negative-stranded RNA viruses with a tripartite genome. We isolated two substrains from a parental strain of Puumala hantavirus (PUUV-Pa), PUUV-small (PUUV-Sm) and PUUV-large (PUUV-La), named after their focus size when titrated. The two isolates were sequenced; this revealed differences at two positions in the nucleocapsid protein and two positions in the RNA-dependent RNA polymerase, but the glycoproteins were identical. We also detected a 43-nucleotide deletion in the PUUV-La S-segment 5' noncoding region covering a predicted hairpin loop structure that was found to be conserved among all hantaviruses with members of the rodent subfamily Arvicolinae as their hosts. Stocks of PUUV-La showed a lower ratio of viral RNA to infectious particles than stocks of PUUV-Sm and PUUV-Pa, indicating that PUUV-La replicated more efficiently in alpha/beta interferon (IFN-α/β)-defective Vero E6 cells. In Vero E6 cells, PUUV-La replicated to higher titers and PUUV-Sm replicated to lower titers than PUUV-Pa. In contrast, in IFN-competent MRC-5 cells, PUUV-La and PUUV-Sm replicated to similar levels, while PUUV-Pa progeny virus production was strongly inhibited. The different isolates clearly differed in their potential to induce innate immune responses in MRC-5 cells. PUUV-Pa caused stronger induction of IFN-β, ISG56, and MxA than PUUV-La and PUUV-Sm, while PUUV-Sm caused stronger MxA and ISG56 induction than PUUV-La. These data demonstrate that the phenotypes of isolated hantavirus substrains can have substantial differences compared to each other and to the parental strain. Importantly, this implies that the reported differences in phenotypes for hantaviruses might depend more on chance due to spontaneous mutations during passage than inherited true differences between hantaviruses.