Scanning transmission electron microscopy of biological structures

The design of the scanning transmission electron microscope (STEM) has been conceived to optimize its detection efficiency of the different elastic and inelastic signals resulting from the interaction of the high energy primary electrons with the specimen. Its potential use to visualize and measure biological objects was recognized from the first studies by Crewe and coworkers in the seventies. Later the real applications have not followed the initial hopes. The purpose of the present paper is to describe how the instrument has practically evolved and recently begun to demonstrate all its potentialities for quantitative electron microscopy of a wide range of biological specimens, from freeze-dried isolated macromolecules to unstained cryosections. Emphasis will be put on the mass-mapping, multi-signal and elemental mapping modes which are unique features of the STEM instruments.     

荨麻科楼梯草属植物瘦果的补充描述

楼梯草属植物的瘦果具有较高的形态多样性,可作为种类鉴定的重要依据.然而,中国超过半数楼梯草属植物缺少瘦果形态信息.该研究通过野外考察、标本查阅以及光镜和扫描电镜的观察,对七种楼梯草属植物的瘦果进行了补充描述,并提供了墨线图和照片.该研究结果对该属的进一步分类修订提供了有价值的信息.     

Effects of freezing to −196 °C and thawing on Setaria lutescens seeds

The effects of single and repeated freezing and thawing of Setaria lutescens seeds in liquid nitrogen were investigated. One freeze to ?196 °C followed by a slow thaw, increased seed germination from 40 to 70%, but additional freeze-thaw cycles reduced germination to 30%. Using a scanning electron microscope, evidence was produced that seed coat cracking did not cause either initial increased, or subsequent reduced germination. Observations with a transmission electron microscope revealed that disruption of the integrity of lipid bodies accompanied increased damage from repeated freezing at ?196 °C and thawing. Repeated freezing and thawing of seeds stored in liquid nitrogen should be done with care to avoid loss of the germplasm.     

A new model for the geometry of the binding of myosin crossbridges to muscle thin filaments

We have used the method of three-dimensional image reconstruction of electron micrographs to analyse the structure of thin filaments and pure F-actin filaments decorated with myosin subfragment-1. To help improve on the earlier work of Moore et al. (1970), we have obtained all our data using minimal electron dose procedures to reduce radiation damage. Modifications in the specimen preparation have enabled us to process straight stretches of filament twice as long as any used in the earlier work, resulting in a corresponding improvement in the signal-to-noise ratio and the resolution. The results show significant changes in the density distribution in the region near the axis of the structure. Compared with the earlier model, the reconstructions show the presence of extra density close to the axis of the particle. We present a case for identifying actin with the density in this region, rather than with the density at higher radius previously designated as actin. This new assignment for the position of actin within the decorated filament structure leads to a radical change in the geometry of the model for myosin subfragment-lactin interaction. Furthermore, by comparing the features that we identify as actin with the reconstructed images of undecorated thin filaments published by Wakabayashi et al. (1975), we conclude that the polarity that has previously been assumed for the thin filament is incorrect. When the thin filament polarity is reversed, the position that tropomyosin is believed to occupy in the active state coincides with a weakly resolved feature in our reconstructions of decorated thin filaments. These findings, involving a reversal of thin filament polarity combined with the change in the geometry of myosin subfragment-1-actin interaction, allow a revised steric blocking model to be constructed.     

Preparation of chromosome spreads for electron (TEM,SEM, STEM), light and confocal microscopy

In the past, ultrastructural studies on chromosome morphology have been carried out using light microscopy, scanning electron microscopy and transmission electron microscopy of whole mounted or sectioned samples. Until now, however, it has not been possible to use all of these techniques on the same specimen. In this paper we describe a specimen preparation method that allows one to study the same chromosomes by transmission, scanning-transmission and scanning electron microscopy, as well as by standard light microscopy and confocal microscopy. Chromosome plates are obtained on a carbon coated glass slide. The carbon film carrying the chromosomes is then transferred to electron microscopy grids, subjected to various treatments and observed. The results show a consistent morphological correspondence between the different methods. This method could be very useful and important because it makes possible a direct comparison between the various techniques used in chromosome studies such as banding, in situ hybridization, fluorescent probe localization, ultrastructural analysis, and colloidal gold cytochemical reactionsAbbreviations CLSM confocal laser scanning microscope - EM electron microscopy - kV kilovolt(s) - LM light microscope - SEM scanning electron microscope - STEM scanning-transmission electron microscope - TEM transmission electron microscope     

A description of the life cycle of Entomophthora sp. in the two-spotted spider mite

Entomophthora sp. killed its host, Tetranychus urticae, in 3.38 days at 25°C and in 11.02 days at 15°C. Development of hyphal bodies within the mite was studied with a light microscope, and a scanning electron microscope was used to examine spore development and structure. A comparison of this fungus with other mite-infecting fungi revealed that it is more closely related to E. floridana than to E. tetranychi, and should be called Entomophthora sp. near floridana until a more detailed study of E. floridana can be made.     

A Scanning Electron Microscopic Evaluation of Section and Film Mounting for Transmission Electron Microscopy

Mounting of support films and sections for transmission electron microscopy has been examined with the scanning electron microscope. Experiments have been designed to test the adherence of support films to polished and matte surfaces of specimen grids. It is the conclusion of the authors that sections and films should be mounted on the dull or matte surface of Athene-type specimen grids.     

Study on pathway and characteristics of ion secretion of salt glands of Limonium bicolor

Recretohalophytes with specialized salt-secreting structures, including salt glands and salt bladders, can secrete excess salts from plant tissues and enhance salinity tolerance of plants. However, the pathway and property of salt secretion by the salt gland has not been elucidated. In the article, Limonium bicolor Kuntze was used to investigate the pathway and characteristics of salt secretion of salt gland. Scanning electron microscope micrographs showed that each of the secretory cells had a pore in the center of the cuticle, and the rice grain-like secretions were observed above the pore. The chemical composition of secretions from secretory pores was mainly NaCl using environmental scanning electron microscope technique. Non-invasive micro-test technology was used to directly measure ion secretion rate of salt gland, and secretion rates of Na⁺ and Cl^? were greatly enhanced by a 200-mmol/L NaCl treatment. However, epidermal cells and stoma showed little secretion of ions. In conclusion, our results provide evidence that the salt glands of L. bicolor have four secretory pores and that NaCl is secreted through these pores of salt gland.     

Osservazioni preliminari al microscopio elettronico a scansione sulle ornamentazioni delle spore di Russula

Abstract

Preliminary observations on spore ornementation of Russula, as seen in the scanning electron microscope. — The spores of 16 species of Russula have been examined in the scanning electron microscope, as a preliminary attempt to see if an accurate examination of the spore surface at the ultrastructural level could reveal details of ornamentation which might be useful for the classification of the many species of this genus. The examination, carried out both on fixed and unfixed specimens, has demonstrated that the spore shape is always round or slightly elliptic, and that the obnormal forms as previously described are probably artifacts. Five main types of ornamentation have been described: single wart-like and single finger-like Protrusion, wart- or finger-like protrusions interconnected by thin ridges, and thick, short « papillae » together with large ridges that run along large tracts of the spore circumference. The type of ornamentation was a constant character in each species.     

Quantitative analysis of knock-on and thermal damage of biological specimens by electron irradiation in transmission electron microscopy

High-energy electrons are able to transfer momentum to nuclei, which results in displacement on to the interstitial lattice sites with a maximum transferred energy of 4 · 10⁴ eV for carbon at 100 keV. Moreover, most of the energy dissipated in energy losses is converted into heat, which results in melting and evaporation.The specimen temperature rise was calculated by the heat conduction theory and confirmed by the specimen drift due to the thermal damage. The damage can be reduced by a small area of illumination, the use of a metal-coated microgrid and small area scanning.A further displacement due to the knock-on collision and the resulting etching rate of biological specimens was measured. The damage is proportional to the current density in c cm^-2 at the specimen. The allowable maximum dose was obtained from the measurement of an etching rate with the weight loss and dry density of the specimens.It was found that the images affected by the electron irradiation, in which -H, C-H, C-N bonds break molecules in proteinaceous biological specimens are removed, and the remaining molecules are changed to stable carbon-rich molecules by deposition, polymerization and contamination. In addition, defect images were observed in high contrast, when compared with unaffected images taken with a small area scanning method.     

Correlative In Vivo 2 Photon and Focused Ion Beam Scanning Electron Microscopy of Cortical Neurons

Correlating in vivo imaging of neurons and their synaptic connections with electron microscopy combines dynamic and ultrastructural information. Here we describe a semi-automated technique whereby volumes of brain tissue containing axons and dendrites, previously studied in vivo, are subsequently imaged in three dimensions with focused ion beam scanning electron microcopy. These neurites are then identified and reconstructed automatically from the image series using the latest segmentation algorithms. The fast and reliable imaging and reconstruction technique avoids any specific labeling to identify the features of interest in the electron microscope, and optimises their preservation and staining for 3D analysis.     

The reproducible observation of unstained embedded cellular material in thin sections: visualisation of an integral membrane protein by a new mode of imaging for STEM

The contrast on micrographs obtained by conventional imaging in the conventional transmission electron microscope and in the scanning transmission electron microscope (STEM) (brightfield and darkfield) reflects mainly the variations of the mass-density and of the thickness of the specimen. The density differences in resin-embedded, unstained materials are too small to give enough contrast when compared to that produced by the surface perturbations introduced by sectioning. By darkfield imaging, therefore, this variable surface relief does not lead reproducibly to interpretable micrographs of high quality. Imaging by the ratio of elastically over inelastically scattered electrons in the STEM (Z-contrast) depends primarily on the atomic composition of the material. We present here the first experimental tests of theoretical predictions with thin sections; Z-contrast micrographs of septate junctions reveal the transmembrane proteins which are not visible in uranyl acetate stained sections viewed by conventional brightfield imaging.     

Biosynthesized silver nanoparticles using Caulerpa taxifolia against A549 lung cancer cell line through cytotoxicity effect/morphological damage

The Caulerpa taxifolia is excellent marine green algae, which produced enormous bioactive compounds with more biological activities. Also, it is an excellent source for synthesis of Ag NPs with increased bioactivity against various infections. In our study, the marine algae marine algae Caulerpa taxifolia mediated Ag NPs was synthesized effectively. The synthesized Ag NPs was characterized well using UV-spectrometer and X-ray powder diffraction (XRD) and confirmed as synthesized particle was Ag NPs. The available structure of the Ag NPs was morphologically identified by scanning electron microscope (SEM), and exact minimum size, polydispersive spherical shape of the entire Ag NPs structure was confirmed by Transmission electron microscope (TEM). Further, the anti-cancer efficiency of biosynthesized Ag NPs against A549 lung cancer cells was found at 40 µg/mL concentration by cytotoxicity experiment. In addition, the phase contrast images of the result were supported the Ag NPs, which damaged the A549 morphologically clearly. Finally, florescence microscopic images were effectively proved the anti-cancerous effect against A549 lung cancer cells due to the condensed morphology of increased death cells. All the confirmed in-vitro results were clearly stated that the Caulerpa taxifolia mediated Ag NPs has superior anti-cancer agent against A549 lung cancer cells.     

Developmental characteristics of floral organs and pollen of Chinese cabbage (Brassica campestris L. ssp. chinensis)

Morphological and cytological studies are complementary approaches to understand the molecular mechanisms that regulate floral developmental pathways. To better understand abnormal mutant phenotypes in floral development, we conducted detailed observations and investigations of the morphology, cytology, and cell ultrastructure of wild-type Chinese cabbage (Brassica campestris L. ssp. chinensis Makino and syn. B. rapa ssp. chinensis) flowers when they developed from primordia to anthesis. First, we measured bud and organ length with a stereo microscope and observed the developmental status and characteristics of the floral organs using a scanning electron microscope; then we made thin slices of anthers to observe the developmental stage and characteristics of pollen using an optical microscope; and finally, we made super-thin slices of anthers to observe the ultrastructure of pollen during its development with the aid of a transmission electron microscope. In this study, the floral developmental continuum was divided into 17 stages based on significant changes in the shape of floral primordia, and the pollen developmental continuum was divided into 14 stages based on the developmental characteristics. The results could provide the morphological basis for further research on the molecular mechanisms that regulate development of the floral organs and/or pollen of Chinese cabbage and their allied species.     

Scanning Electron Microscopy of Selected Members of the Streptomyces hygroscopicus Group

Distinctive variations in whole spore morphology and spore surface morphology of Streptomyces hygroscopicus strains, which had been observed previously by the authors by the preshadowed carbon replica technique, were confirmed by observations with the scanning electron microscope.     

Revision of Porina-like cheilostome Bryozoa from the Campanian and Maastrichtian of Central Asia

Porina-like cheilostome bryozoans are a taxonomically problematic group. They were moderately common in latest Cretaceous sediments throughout the world. However, the complexity of their tiny skeletons makes it difficult to describe species morphologically, especially as many features have no counterparts in Recent cheilostomes. In this contribution, we revise the type material of most known Porina-like cheilostomes from the Campanian and Maastrichtian of Central Asia using combined scanning electron microscopy and X-ray microtomography. The revised species are Diplobeisselina? abduazimovae (Favorskaya, 1992), Beisselinopsis quincunx Voigt, 1962, Pseudobathystomella lata Favorskaya, 1988, Beisselina bella Favorskaya, 1980 and Uzbekipora anplievae (Favorskaya, 1992). Pseudobathystomella mira sp. nov. is proposed for one colony previously identified as Pseudobathystomella lata, while one badly preserved specimen previously assigned to Beisselina bella is described here in open nomenclature as Beisselina? sp. The diagnosis of Pseudobathystomella Favorskaya, 1988 is amended. Uzbekipora gen. nov. is introduced for one species from the southern Aral Sea region in Uzbekistan showing a frontal shield traversed by a reticulate network of ridges that conceals autozooidal boundaries and encloses foraminate mounds.     

Scanning electron microscopic studies of cilia

Summary A simple method for the preparation of ciliated epithelia for study with the scanning electron microscope is described. Ciliary groups are well preserved and it is possible to discern individual cilia and work out their numbers and orientation. Following scanning electron microscopical study some of the material was prepared for transmission electron microscopy and the ultrastructure of the tissue was found to be surprisingly well preserved. The tracheal epithelium of the rabbit, the olfactory epithelia of the goldfish and the rabbit, and the sensory epithelia in the statocyst of a cephalopod mollusc were examined with the scanning electron microscope to demonstrate the possibilities of the method. Acknowledgements. We would like to thank Professor J. Z. Young for his continued interest and support. The scanning electron microscope was purchased with a grant provided by the Science Research Council to Dr. Boyde, Mr. R. Willis helped in the initial stages of the study, Mr. G. Savage provided help with the goldfish material, Mr. S. Waterman provided much photographic assistance, and Mrs. N. Finney the secretarial assistance.     

ULTRASTRUCTURAL LOCALIZATION OF MINERAL MATTER IN BACTERIAL SPORES BY MICROINCINERATION

The fine localization of mineral matter in spores of Bacillus megaterium and Bacillus cereus was studied by the technique of microincineration adapted for use with the electron microscope. The specimens, which included intact and thin-sectioned spores as well as shed spore coats, were burned either in the conventional way at high temperature or by a new technique using electrically excited oxygen at nearly room temperature. The ash residues were examined by bright field, dark field, and diffraction in the electron microscope and also with the phase contrast microscope. In some cases, the specimen was previewed in both microscopes before incineration. The results do not support a previous report that the mineral elements of the spore are confined to a peripheral layer, but rather indicate that the spore core as well as the coat are mineral-rich. The cortex may be deficient in minerals, but the possibility of artifact prevents a clear decision on this point. Incinerated B. megaterium spores show a highly ordered fine structure displaying 100 A periodicity in the ash of the middle layer of the coat. The nature of this structure is discussed, as is the technique which demonstrated it. The fine definition of the ash patterns, particularly those obtained with the low-temperature, excited-oxygen technique, suggests that microincineration may be generally useful in the study of fine structure.     

Classification of Streptomyces Spore Surfaces into Five Groups

Streptomyces spores surfaces have been classified into five groups, smooth, warty, spiny, hairy, and rugose, by examination of carbon replicas of spores with the transmission electron microscope and by direct examination of spores with the scanning electron microscope.