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1.
To elucidate the petromyzontid speciation process, the genetic independence of the fluvial non-parasitic populations within the anadromous parasitic Lethenteron camtschaticum was estimated by using polymorphic microsatellite loci. Abundant gene flow was revealed in multitemporal scales between potentially sympatric populations, suggesting ongoing gene flow resulting from imperfect size-assortative mating between them and plastic determination of life histories. On the contrary, landlocked fluvial non-parasitic populations in the upper region of dams were genetically divergent from anadromous parasitic populations. The temporal heterogeneity of gene flow, i.e. contemporary little gene flow but significant gene flow over the long-term between the landlocked fluvial non-parasitic and anadromous parasitic populations was elucidated. In addition, the divergence time of isolation of the landlocked populations from the ancestral anadromous parasitic population was estimated to have occurred 17.9-428.2 years ago, which includes the construction times of an initial dam c. 90 years ago. These instances indicate that the landlocked populations should have very recently been established, and subsequent accumulation of divergence and development of reproductive isolation are predicted. The present landlocked fluvial non-parasitic populations should be analogous to the founder populations in terms of petromyzontid speciation. The data also strongly support the hypothesis of multitemporal and multispatial speciation in the petromyzontid stem-satellite species complex.  相似文献   

2.
Patterns of gene flow and genetic structuring were examined in the canyon treefrog, Hyla arenicolor (Cope). Hierarchical analysis of genetic variation was performed on mitochondrial cytochrome b haplotypes from 323 individuals, representing 32 populations from previously described phylogeographic regions. Results from AMOVA revealed that 60.4-78.9% of the recovered genetic variation was the result of differences in the appointment of genetic variation between subdivisions of the primary phylogeographic regions. In contrast, populations only contained between 13.9 and 30.1% of the observed haplotypic variation. Gene flow estimates based on calculations of phi ST revealed moderate levels of gene flow within phylogeographic regions, but there was no evidence of gene flow between these regions, suggesting that geographical boundaries were probably important in the formation of phylogeographic structure in H. arenicolor. Phylogeographic regions exhibited very different patterns of gene flow. One region showed evidence of recent colonization. Another region exhibited very limited gene flow. Moderate to high estimates of gene flow were obtained for populations from two distinct phylogeographic regions characterized by mesic and xeric environments. Isolation by distance was observed in both regions suggesting that these regions are in genetic equilibrium. Because gene flow is extremely unlikely between the populations in the xeric region, this result is interpreted as historical gene flow. These results indicate that isolation-by-distance effects may still be observed even when population genetic structure and gene flow are the result of historical association.  相似文献   

3.
Natural populations of wild common buckwheat have been found growing adjacent to cultivated populations of common buckwheat. Gene flow between the cultivated and natural populations would be expected in such cases. To evaluate the amount of gene flow, two sets composed of a cultivated buckwheat population and an adjacent natural population of wild common buckwheat were chosen, one from Yanjing village in the Sanjiang area, which is presumed to be the original birthplace of common buckwheat, and one from Jinhe village, Yanyuan district of Sichuan province in China. The genotypes of 45 individuals from each population were examined at eight microsatellite marker loci to estimate the magnitude of gene flow between the cultivated and wild common buckwheat populations. The Bayesian method with a Markov chain Monte Carlo approach estimated that the magnitude of gene flow between the populations in the Sanjiang area at 0.002-0.008 was not significantly different from that found in Yanyuan district at 0.002-0.008. The gene flow between cultivated populations was higher, usually at 0.002-0.044 (exceptionally high at 0.255 between cultivated populations of Yanjing and Jinhe), than that found between a cultivated population and a natural population (0.002-0.008) or between two natural populations (0.002-0.003). Therefore, the genetic similarity found between the cultivated populations and natural populations observed in the Sanjiang area (Konishi et al., 2005) was not due to recent gene flow between them. This in turn suggests that the close genetic relationship found in the Sanjiang area may be due to the common ancestry of the natural populations and cultivated common buckwheat.  相似文献   

4.
亚欧美栗疫病菌群体的遗传多样性   总被引:4,自引:0,他引:4  
从 12 0个随机引物中筛选出条带清晰、主带明显、重复性好的 9个引物 ,对来自不同地域和寄主的 7个群体的 14 2个栗疫病菌菌株进行 RAPD分析。 9个引物共扩增出条带 12 4条 ,其中多态性条带 111条 ,多态性比率为 89.5 2 %。利用 Popgen3.2软件对供试群体进行遗传多样性分析和 UPGMA聚类。结果表明 ,中国地区 4个群体间的遗传相似性较大 ,与美国、意大利和日本群体间的相似性较小 ;美国和意大利群体间的遗传相似性较大 ,且它们与日本群体间的相似性大于与中国群体间的相似性。病原菌群体的遗传变异率为 0 .2 35 1,其中在地区水平上 ,82 .34%由群体内的变异引起 ,17.6 6 %由群体间的差异引起 ,群体间的基因流动值为 2 .3311;而在寄主水平上 ,则 79.4 2 %由群体内的变异引起 ,2 0 .5 8%由群体间的差异引起 ,群体间的基因流动值为 1.92 97  相似文献   

5.
The geographic distribution of phenotypic variation among closely related populations is a valuable source of information about the evolutionary processes that generate and maintain biodiversity. Leapfrog distributions, in which phenotypically similar populations are disjunctly distributed and separated by one or more phenotypically distinct populations, represent geographic replicates for the existence of a phenotype, and are therefore especially informative. These geographic patterns have mostly been studied from phylogenetic perspectives to understand how common ancestry and divergent evolution drive their formation. Other processes, such as gene flow between populations, have not received as much attention. Here, we investigate the roles of divergence and gene flow between populations in the origin and maintenance of a leapfrog distribution in Phyllobates poison frogs. We found evidence for high levels of gene flow between neighbouring populations but not over long distances, indicating that gene flow between populations exhibiting the central phenotype may have a homogenizing effect that maintains their similarity, and that introgression between ‘leapfroging’ taxa has not played a prominent role as a driver of phenotypic diversity in Phyllobates. Although phylogenetic analyses suggest that the leapfrog distribution was formed through independent evolution of the peripheral (i.e. leapfrogging) populations, the elevated levels of gene flow between geographically close populations poise alternative scenarios, such as the history of phenotypic change becoming decoupled from genome‐averaged patterns of divergence, which we cannot rule out. These results highlight the importance of incorporating gene flow between populations into the study of geographic variation in phenotypes, both as a driver of phenotypic diversity and as a confounding factor of phylogeographic inferences.  相似文献   

6.
Chrysophtharta agricola (Chapuis) is a pest of commercial eucalypt plantations in Tasmania and Victoria. Vagility of pest populations may result in difficulty predicting temporal and spatial pest outbreaks, and influence genetic resistance to chemical control. Gene flow in this pest species was estimated to assess predictability of attack, the potential efficacy of natural enemies, and the likelihood of resistance build-up. Ten geographic populations of C. agricola (six from Tasmania, one from the Australian Capital Territory, one from New South Wales and two from Victoria) were examined for genetic variation and gene flow using cellulose acetate allozyme electrophoresis. Six enzyme systems (PGI, PGD, PGM, IDH, HEX and MPI) were consistently polymorphic and scorable and were used to quantify estimated gene flow between populations. FST values and analysis of molecular variance indicated that gene flow was restricted between populations. Chrysophtharta agricola exhibited high levels of heterozygosity, probably because of high allelic diversity, and because all loci examined were polymorphic. The southern-most population was the most genetically different to other Tasmanian populations, and may also have been the most recently colonized. Limited gene flow implies that outbreaks of C. agricola should be spatially predictable and populations susceptible to control by natural enemies. Our results also imply that genetic resistance to chemical control may occur under frequent application of insecticide. However, testing population movement between plantations and native forest also needs to be conducted to assess gene flow between forest types.  相似文献   

7.
选用8对多态的微卫星引物, 研究了毛红椿(Toona ciliata var. pubescens)核心居群和边缘居群的遗传多样性。研究结果显示, 边缘居群的观察等位基因数和有效等位基因数并不比核心居群低, 甚至更高。普通广布和稀有地方等位基因在所有居群中均有分布, 而普通地方和稀有广布等位基因分别仅在5个和3个居群中有分布。从4种类型等位基因总数上看, 边缘居群高于核心居群, 特别是边缘居群的稀有地方等位基因数量明显多于核心居群。边缘居群的平均期望杂合度和观察杂合度都高于核心居群。核心居群间的基因分化系数为0.1520, 边缘居群间为0.3045, 边缘居群与核心居群的遗传分化差异达到显著水平。核心居群间基因流大于1, 而边缘居群间基因流小于1, 说明核心居群间基因交流频繁, 边缘居群由于片段化和地形影响, 基因流较小。Mantel检验结果显示, 居群间遗传距离与地理距离的相关性不显著, 说明地理距离对毛红椿居群遗传分化的影响不显著。  相似文献   

8.
Information on gene flow among geographic and host populations of C. pomonella (L.) (Lepidoptera: Tortricidae) in South Africa is lacking, despite the importance of these measures for the success of control practices such as chemical control and sterile insect release, which are affected by the amount of gene flow among populations. Therefore, populations collected from nine geographically distant regions in South Africa from apples, pears, and stone fruit were compared using amplified fragment length polymorphism with five selective primer pairs. Results showed that although populations from different hosts were not genetically differentiated, significant evidence for population substructure was apparent between geographic populations. Over local scales, it was possible to distinguish between populations collected from orchards situated <1 km apart. These results suggest that although extensive gene flow occurs among populations from different hosts, gene flow among local geographic C. pomonella populations may be limited and is explained in terms of limited moth flight, the relative isolation of pome fruit production areas, and the absence of wild hosts.  相似文献   

9.
Gene flow based on the spatial distribution of rare alleles at 25 gene loci was estimated in 15 populations of Ceratitis capitata (Wiedemann) from different parts of the world. Estimates of Nm, the number of migrants exchanged per generation among populations in different regions of the world, appeared to be quite similar, ranging from 3.36 in tropical Africa to 2.94 in the New World and 2.72 in Mediterranean basin populations. This suggests that gene flow among neighbouring populations of medfly is quite extensive. The genetic differentiation in American, Mediterranean and African populations was related to major climatic differences between North and South. These differences arise mainly from five loci that showed gene frequency patterns suggestive of latitudinal clines in allele frequencies. The clinal variation was such that tropical-subtropical populations were more heterozygous than temperate populations. It was concluded that gene flow, counteracting the forces of natural selection and genetic drift, determines the extent to which geographical populations of C. capitata are differentiated.  相似文献   

10.
The process of ecological differentiation leading to the evolution of heavy-metal tolerant populations in Armeria maritima was studied by comparing population genetic structure and pattern of gene flow between populations growing on heavy-metal contaminated against non-contaminated sites using allozyme markers. In addition the evolution of reproductive isolation among populations was studied by measuring pollen fertility in interpopulational hybrids. The allozyme data suggested that in A. maritima multiple independent evolutionary origins of heavy-metal tolerant populations have occurred in the absence of strong genetic bottlenecks. The pattern of gene flow among populations was consistent with the model of isolation by distance with considerable gene flow between neighbor populations, and no reduction of gene flow between tolerant and non-tolerant populations. Hence it appears that substantial gene flow has not hampered genetic differentiation, probably because of the high selection pressure for heavy-metal tolerance. The pattern of reproductive isolation among populations suggests that evolution of heavy-metal tolerant populations has not triggered the development of reproductive barriers against non-tolerant populations. However, partial reproductive isolation has occurred under geographic separation.  相似文献   

11.
The degree to which conspecific populations are interconnected via ongoing gene flow remains an important focus of evolutionary biology. One major difficulty in distinguishing ongoing gene flow from historical subdivision is that either process can generate similar estimates of apparent gene flow. Thus, gene flow estimates themselves are insufficient to distinguish between these alternatives. However, genetic data coupled with additional information about demography and distribution do allow a distinction to be made. Here we address the specific question, does gene flow link populations of Aquilegia? In a survey of a 525 B.P. chloroplast DNA fragment sampled from 251 individual plants from 18 populations of three taxa, five haplotypes were identified. No significant relationship between geographic distance and apparent gene flow between population pairs existed. Further, the estimated level of gene flow was entirely compatible with a historical subdivision of Aquilegia populations during the late Pleistocene or early Holocene. Therefore, these patterns of variation are due not to ongoing gene flow, but rather to historical association among populations. Thus Aquilegia populations may be considered as distinct evolutionary entities with regard to seed-mediated processes. As a result, comparative analysis of ecological traits undergoing potentially rapid evolution (e.g., life histories, mating systems, inbreeding depression) should be possible in these taxa.  相似文献   

12.
Observed patterns of genetic structure result from the interactions of demographic, physical, and historical influences on gene flow. The particular strength of various factors in governing gene flow, however, may differ between species in biologically relevant ways. We investigated the role of demographic factors (population size and sex-biased dispersal) and physical features (geographic distance, island size and climatological winds) on patterns of genetic structure and gene flow for two lineages of Greater Antillean bats. We used microsatellite genetic data to estimate demographic characteristics, infer population genetic structure, and estimate gene flow among island populations of Erophylla sezekorni/E. bombifrons and Macrotus waterhousii (Chiroptera: Phyllostomidae). Using a landscape genetics approach, we asked if geographic distance, island size, or climatological winds mediate historical gene flow in this system. Samples from 13 islands spanning Erophylla's range clustered into five genetically distinct populations. Samples of M. waterhousii from eight islands represented eight genetically distinct populations. While we found evidence that a majority of historical gene flow between genetic populations was asymmetric for both lineages, we were not able to entirely rule out incomplete lineage sorting in generating this pattern. We found no evidence of contemporary gene flow except between two genetic populations of Erophylla. Both lineages exhibited significant isolation by geographic distance. Patterns of genetic structure and gene flow, however, were not explained by differences in relative effective population sizes, island area, sex-biased dispersal (tested only for Erophylla), or surface-level climatological winds. Gene flow among islands appears to be highly restricted, particularly for M. waterhousii, and we suggest that this species deserves increased taxonomic attention and conservation concern.  相似文献   

13.
We estimate parameters of a general isolation-with-migration model using resequence data from mitochondrial DNA (mtDNA), the Y chromosome, and two loci on the X chromosome in samples of 25-50 individuals from each of 10 human populations. Application of a coalescent-based Markov chain Monte Carlo technique allows simultaneous inference of divergence times, rates of gene flow, as well as changes in effective population size. Results from comparisons between sub-Saharan African and Eurasian populations estimate that 1500 individuals founded the ancestral Eurasian population approximately 40 thousand years ago (KYA). Furthermore, these small Eurasian founding populations appear to have grown much more dramatically than either African or Oceanian populations. Analyses of sub-Saharan African populations provide little evidence for a history of population bottlenecks and suggest that they began diverging from one another upward of 50 KYA. We surmise that ancestral African populations had already been geographically structured prior to the founding of ancestral Eurasian populations. African populations are shown to experience low levels of mitochondrial DNA gene flow, but high levels of Y chromosome gene flow. In particular, Y chromosome gene flow appears to be asymmetric, i.e., from the Bantu-speaking population into other African populations. Conversely, mitochondrial gene flow is more extensive between non-African populations, but appears to be absent between European and Asian populations.  相似文献   

14.
T Aavik  R Holderegger  J Bolliger 《Heredity》2014,112(5):471-478
Understanding the relationship between structural and functional connectivity is essential for successful restoration and conservation management, particularly in intensely managed agricultural landscapes. We evaluated the relationship between structural and functional connectivity of the wetland plant Lychnis flos-cuculi in a fragmented agricultural landscape using landscape genetic and network approaches. First, we studied the effect of structural connectivity, such as geographic distance and various landscape elements (forest, agricultural land, settlements and ditch verges), on gene flow among populations as a measurement of functional connectivity. Second, we examined the effect of structural graph-theoretic connectivity measures on gene flow among populations and on genetic diversity within populations of L. flos-cuculi. Among landscape elements, forests hindered gene flow in L. flos-cuculi, whereas gene flow was independent of geographic distance. Among the structural graph-theoretic connectivity variables, only intrapopulation connectivity, which was based on population size, had a significant positive effect on gene flow, that is, more gene flow took place among larger populations. Unexpectedly, interpopulation connectivity of populations, which takes into account the spatial location and distance among populations, did not influence gene flow in L. flos-cuculi. However, higher observed heterozygosity and lower inbreeding was observed in populations characterised by higher structural interpopulation connectivity. This finding shows that a spatially coherent network of populations is significant for maintaining the genetic diversity of populations. Nevertheless, lack of significant relationships between gene flow and most of the structural connectivity measures suggests that structural connectivity does not necessarily correspond to functional connectivity.  相似文献   

15.
In species acting as hosts of infectious agents, the extent of gene flow between populations is of particular interest because the expansion of different infectious diseases is usually related to the dispersal of the host. We have estimated levels of gene flow among populations of the sigmodontine rodent Oligoryzomys flavescens, in which high titers of antibodies have been detected for a Hantavirus in Argentina that produces a severe pulmonary syndrome. Enzyme polymorphism was studied by means of starch gel electrophoresis in 10 populations from the area where human cases of Hantavirus have occurred. Genetic differentiation between populations was calculated from FST values with the equation Nm = [(1/FST−1]/4. To assess the relative importance of current gene flow and historical associations between populations, the relationship of population pairwise log Nm and log geographic distance was examined. Low FST (mean = 0.038) and high Nm (15.27) values suggest high levels of gene flow among populations. The lack of an isolation by distance pattern would indicate that this species has recently colonized the area. The northernmost population, located on the margin of a great river, shows very high levels of gene flow with the downstream populations despite the large geographic distances. Passive transport of animals down the river by floating plants would promote unidirectional gene flow. This fact and the highest mean heterozygosity of that northernmost population suggest it is a center of dispersal within the species' range. This revised version was published online in July 2006 with corrections to the Cover Date.  相似文献   

16.
山体屏障能阻断植物连续的生境,干扰居群的基因交流,从而影响植物居群的遗传结构.本研究应用AFLP标记探讨神农架地区南北坡4条河岸带分布的连香树4个居群的遗传多样性水平,以及山体隔离对居群遗传结构和基因流的影响.结果显示连香树居群水平的Nei's基因多样性(h)和Shannon信息指数(/)分别为0.116和0.173,遗传多样性水平相对较高.在遗传结构方面,邻接树(NJ)和主坐标分析的结果清晰地将南北坡分开,从居群和个体上都分成两组.并且STRUCTURE的结果显示基因流在同坡向的居群间比不同坡向的居群间要大.这些表明神农架山体可能对连香树居群的基因交流产生了一定的限制作用.神农架南北坡居群间的分化程度较低(FST为0.075),推测与连香树自身有较强的种子散布和花粉传播能力有关.本研究结果表明,神农架山体及相关的生态因子可能对连香树居群的基因交流产生了限制作用.  相似文献   

17.
Gene flow between cultivated and wild sunflowers   总被引:6,自引:0,他引:6  
With the development of transgenic crops, concern has been expressed regarding the possible escape of genetically-engineered genes via hybridization with wild relatives. This is a potential hazard for sunflowers because wild sunflowers occur as weeds in fields where cultivated sunflowers are grown and hybridization between them has been reported. In order to quantify the potential for gene escape, two experimental stands of sunflower cultivars were planted at two sites with different rainfall and altitude profiles. Populations of wild plants were planted at different distances from each cultivar stand. An allele homozygous in the cultivar (6Pgd-3-a), but absent in the wild populations, was used as a molecular marker to document the incidence and rate of gene escape from the cultivar into the wild populations of sunflowers. Three-thousand achenes were surveyed to determine the amount of gene flow from the cultivated to the wild populations. The marginal wild populations (3 m from the cultivar) showed the highest percentage (27%) of gene flow. Gene flow was found to decrease with distance; however, gene flow occurred up to distances of 1000 m from the source population. These data suggest that physical distance alone will be unlikely to prevent gene flow between cultivated and wild populations of sunflowers.  相似文献   

18.
Populations of the specialist herbivore, Euphilotes enoptes (Lepidoptera: Lycaenidae), along three elevational transects in the mountains of central Washington state, differed markedly in the phenology of adult flight. In spite of this apparent limitation to gene flow, six allozyme loci revealed substantial gene exchange among populations along these gradients. The elevational difference, and thus the phenological difference, between populations has not influenced the extent of gene flow between them. Because the direct exchange of genes between low- and high-elevation populations is very unlikely, gene flow between them has probably occurred in a stepwise fashion via intermediate populations. It is hypothesized that such gene flow has been biased in an uphill direction due to the combined effects of source size and oviposition behavior. Adult emergence times of populations in the same region are positively correlated with elevation in a nonlinear fashion, consistent with the hypothesis that gene flow from low-elevation populations has been swamping selection at higher altitudes.  相似文献   

19.
Genetic isolation by distance (IBD) has rarely been described in marine species with high potential for dispersal at both the larval and adult life-history stages. Here, we report significant relationships between inferred levels of gene flow and geographic distance in the Atlantic cod, Gadus morhua, at 10 nuclear restriction-fragment-length-polymorphism (RFLP) loci at small regional scales in the western north Atlantic region (< 1,600 km) that mirror those previously detected over its entire geographic range (up to 7,300 km). Highly significant allele frequency differences were observed among eight northwestern Atlantic populations, although the mean FST for all 10 loci was only 0.014. Despite this weak population structuring, the distance separating populations explained between 54% and 62% of the variation in gene flow depending on whether nine or 10 loci were used to estimate Nm. Across the species' entire geographic range, highly significant differences were observed among six regional populations at nine of the 10 loci (mean FST = 0.068) and seven loci exhibited significant negative relationships between gene flow and distance. At this large geographic scale, natural selection acting in the vicinity of one RFLP locus (GM798) had a significant effect on the correlation between gene flow and distance, and eliminating it from the analysis caused the coefficient of determination to increase from 17% to 62%. The role of vicariance was assessed by sequentially removing populations from the analysis and was found to play a minor role in contributing to the relationship between gene flow and distance at either geographic scale. The correlation between gene flow and distance detected in G. morhua at small and large spatial scales suggests that dispersal distances and effective population sizes are much smaller than predicted for the species and that the recent age of populations, rather than extensive gene flow, may be responsible for its weak population structure. Our results suggest that interpreting limited genetic differences among populations as reflecting high levels of ongoing gene flow should be made with caution.  相似文献   

20.
异色瓢虫是一种重要的天敌昆虫,广泛应用于农业生物防治中.本研究以线粒体COII基因作为分子标记,对陕西省分布的异色瓢虫不同地理种群的遗传结构及遗传多样性进行分析,并探讨不同种群间的遗传分化程度及基因交流水平.结果表明: 在21个种群529头异色瓢虫供试样本的COII序列中,共检测到15种单倍型(Hap1~Hap15),其中Hap1和Hap2所占比例最高,分别占总群体的34.4%和37.6%.总群体单倍型多样性指数为0.732,各种群内单倍型多样性范围在0.652~0.786.种群间总基因流为10.13,总群体遗传分化指数为0.024,说明种群间整体遗传分化程度较低.陕西异色瓢虫种群在进化上呈现中性模型,群体大小保持相对稳定,种群间的遗传分化主要来自种群内部.基于Nei遗传距离构建的种群系统发育树,陕南区域种群与陕北和关中区域种群分化明显.种群间遗传分化与地理距离之间存在一定的相关性,并且区域种群的遗传结构与遗传多样性也表现出一定的地理分布模式,推测秦岭的阻隔及南北气候的差异,使陕北、关中与陕南种群间的基因交流存在阻力,导致南北种群间遗传结构和遗传多样性存在差异.  相似文献   

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