Suppression of herbivory by macroalgal density: a critical feedback on coral reefs?

Coral reefs globally are in decline, with some reefs undergoing phase shifts from coral-dominance to degraded states dominated by large fleshy macroalgae. These shifts have been underpinned by the overharvesting of herbivorous fishes and represent a fundamental change in the physical structure of these reefs. Although the physical structure provided by corals is regarded as a key feature that facilitates herbivore activity, the influence of the physical structure of macroalgal stands is largely unknown. Using transplanted Sargassum, the largest coral reef macroalga, we created habitat patches of predetermined macroalgal density (0.25-6.23 kg m(-2)). Remote video cameras revealed both grazing and browsing fishes avoided high density patches, preferring relatively open areas with low macroalgal cover. This behaviour may provide a positive feedback leading to the growth and persistence of macroalgal stands; increasing the stability of phase shifts to macroalgae.     

A comparison of bridled and bridle‐less ichthyoplankton nets in a variable flow estuarine environment

The effectiveness of bridled and bridle‐less plankton nets for sampling ichthyoplankton from a fixed structure in a variable flow environment was examined. From 22 June to 19 September 2011, larval and juvenile fishes were collected weekly during night flood tides from the Moon River, an estuarine tidal creek south of Savannah, Georgia, USA. Passive horizontal tows were made from a fishing pier using two ichthyoplankton nets, each with a 1 m diameter hoop and 1 mm mesh. A bridled plankton net was configured with a tow rope attached to a traditional three‐point bridle anchored to the hoop and a closed, 1 L collection jar at the cod end. A bridle‐less net was configured with a tow rope and a float tied to the top of the hoop while a weight was tied to the bottom of the hoop. The cod end of the bridle‐less net had an open collection bucket with 1 mm mesh. Nets were deployed simultaneously in the water column, just below the surface, for three consecutive 30‐min tows. For each sampling date, pair‐wise comparisons of nets were performed on mean values of fish abundance, species richness, species diversity, and species evenness. Mean abundance was the only consistent difference between bridled and bridle‐less nets, with the bridle‐less net having on average 4.870 times more fishes. Species richness (as measured by both number of species and Margalef's species richness index) tended to be greater in the bridle‐less net, but not significantly greater. Species diversity (Shannon‐Wiener diversity index) and species evenness (Pielou's evenness index) were also not significantly different between the two nets.     

Resource seasonality and fish diets in an Illinois stream

Synopsis The purpose of this study was to evaluate the intensity of competition for food among 9 species of stream fishes that primarily eat aquatic invertebrates. The taxonomic and size composition, and numerical abundance of aquatic invertebrates were monitored for one year using drift and benthic samples. Diet data were obtained from stomachs of fishes captured at the same time and place that invertebrate sampling was done. Diet characteristics examined included taxonomic and size composition, number of prey per fish, and diet breadth. Drifting invertebrates were more abundant early in the year (March–June) than later (July–January). The summer-early fall scarcity of invertebrates was especially notable among those>3.6 mm long, which comprised the bulk of prey found in fish stomachs. Average prey size eaten by a fish species was positively correlated with fish mouth size, but interspecific overlap in prey size was extensive. Cyprinids as a group (5 species) ate proportionally fewer small (< 3.6 mm long) prey from July to January than did the centrarchids and stonecat. Taxonomic compositions of available invertebrates and fish diets varied markedly among sampling dates, but the use of prey taxa by fishes was not correlated with the availability of those taxa. Use of aquatic prey taxa was generally similar among fish species, but cyprinids as a group ate proportionally more terrestrial prey from July to January than did the centrarchids and stonecat. Diet breadths for all species increased as food levels declined, indicating that these fishes experienced resource depression. Food scarcity was evidently more severe for cyprinids since their stomachs contained few prey through the summer and fall relative to the centrarchids and stonecat. Though the fish species studied probably compete for food in the summer and fall, this competition did not account for the community structure observed.     

Diversity among Macroalgae-Consuming Fishes on Coral Reefs: A Transcontinental Comparison

Despite high diversity and abundance of nominally herbivorous fishes on coral reefs, recent studies indicate that only a small subset of taxa are capable of removing dominant macroalgae once these become established. This limited functional redundancy highlights the potential vulnerability of coral reefs to disturbance and stresses the need to assess the functional role of individual species of herbivores. However, our knowledge of species-specific patterns in macroalgal consumption is limited geographically, and there is a need to determine the extent to which patterns observed in specific reefs can be generalised at larger spatial scales. In this study, video cameras were used to quantify rates of macroalgae consumption by fishes in two coral reefs located at a similar latitude in opposite sides of Australia: the Keppel Islands in the Great Barrier Reef (eastern coast) and Ningaloo Reef (western coast). The community of nominally herbivorous fish was also characterised in both systems to determine whether potential differences in the species observed feeding on macroalgae were related to spatial dissimilarities in herbivore community composition. The total number of species observed biting on the dominant brown alga Sargassum myriocystum differed dramatically among the two systems, with 23 species feeding in Ningaloo, compared with just 8 in the Keppel Islands. Strong differences were also found in the species composition and total biomass of nominally herbivorous fish, which was an order of magnitude higher in Ningaloo. However, despite such marked differences in the diversity, biomass, and community composition of resident herbivorous fishes, Sargassum consumption was dominated by only four species in both systems, with Naso unicornis and Kyphosus vaigiensis consistently emerging as dominant feeders of macroalgae.     

Nocturnal relocation of adult and juvenile coral reef fishes in response to reef noise

Juvenile and adult reef fishes often undergo migration, ontogenic habitat shifts, and nocturnal foraging movements. The orientation cues used for these behaviours are largely unknown. In this study, the use of sound as an orientation cue guiding the nocturnal movements of adult and juvenile reef fishes at Lizard Island, Great Barrier Reef was examined. The first experiment compared the movements of fishes to small patch reefs where reef noise was broadcast, with those to silent reefs. No significant responses were found in the 79 adults that were collected, but the 166 juveniles collected showed an increased diversity each morning on the reefs with broadcast noise, and significantly greater numbers of juveniles from three taxa (Apogonidae, Gobiidae and Pinguipedidae) were collected from reefs with broadcast noise. The second experiment compared the movement of adult and juvenile fishes to reefs broadcasting high (>570 Hz), or low (<570 Hz) frequency reef noise, or to silent reefs. Of the 122 adults collected, the highest diversity was seen at the low frequency reefs; and adults from two families (Gobiidae and Blenniidae) preferred these reefs. A similar trend was observed in the 372 juveniles collected, with higher diversity at the reefs with low frequency noises. This preference was seen in the juvenile apogonids; however, juvenile gobiids were attracted to both high and low sound treatments equally, and juvenile stage Acanthuridae preferred the high frequency noises. This evidence that juvenile and adult reef fishes orientate with respect to the soundscape raises important issues for management, conservation and the protection of sound cues used in natural behaviour.     

Predictability of littoral-zone fish communities through ontogeny in Lake Texoma,Oklahoma-Texas,USA

Synopsis We sampled larval, juvenile and adult fishes from littoral-zone areas of a large reservoir (Lake Texoma, Oklahoma-Texas) (1) to characterize environmental factors that influenced fish community structure, (2) to examine how consistent fish–environment relationships were through ontogeny (i.e., larval vs. juvenile and adult), and (3) to measure the concordance of larval communities sampled during spring to juvenile and adult communities sampled at the same sites later in the year. Larval, juvenile and adult fish communities were dominated by Atherinidae (mainly inland silverside, Menidia beryllina) and Moronidae (mainly juvenile striped bass, Morone saxatilis) and were consistently structured along a gradient of site exposure to prevailing winds and waves. Larval, juvenile and adult communities along this gradient varied from atherinids and moronids at highly exposed sites to mostly centrarchids (primarily Lepomis and Micropterus spp.) at protected sites. Secondarily, zooplankton densities, water clarity, and land-use characteristics were related to fish community structure. Rank correlation analyses and Mantel tests indicated that the spatial consistency and predictability of fish communities was high as larval fishes sampled during spring were concordant with juvenile and adult fishes sampled at the same sites during summer and fall in terms of abundance, richness, and community structure. We propose that the high predictability and spatial consistency of littoral-zone fishes in Lake Texoma was a function of relatively simple communities (dominated by 1–2 species) that were structured by factors, such as site exposure to winds and waves, that varied little through time.     

Using a baited camera to assess relative abundance of juvenile Pacific cod: Field and laboratory trials

Juvenile fishes are sometimes difficult to survey because they occur in a variety of structurally complex habitats that are not readily sampled with traditional trawl or seine gear. Laboratory experiments and field sampling were conducted to determine whether a baited-camera system could be used effectively to survey age-0 gadids. Pacific cod (Gadus macrocephalus Tilesius), saffron cod (Eleginus gracilis Tilesius), and walleye pollock (Theragra chalcogramma Pallas) all responded to bait bags presented in the laboratory, with increased general activity and approaches to the bait. Pacific cod responded most strongly, and remained in close proximity to the bait bag. In nearshore habitats of Kodiak, Alaska, age-0 gadids (mostly Pacific cod) were quickly attracted to a baited-camera system. Arrival rates stabilized within 15-min, and several metrics for Pacific cod abundance taken from the video records were closely correlated with the numbers collected in seine hauls. Highest correlations occurred with the total number of fish arriving in camera view during 15-min sets (NFA₁₅) and with the overall maximum number of fish observed at one time during the sets (MaxN_O). The time for first arrival of fish in view (TFA) was not correlated significantly with the numbers of fish in seine collections. NFA₁₅ was also useful for age-1+ saffron cod. Occasionally, the presence of large fish had a negative effect on assessments of age-0 fish, but the impact was important only when the large fish were present continuously. The baited-camera system performed equally well in seagrass, kelp and open habitats, and can be used to rapidly assess the relative abundance of Pacific cod and selected other species in a wide range of habitats in shallow and deep water.     

A key phase in the recruitment dynamics of coral reef fishes: post-settlement transition

Synopsis Recent studies of recruitment dynamics in demersal fishes have placed major emphasis on presettlement mortality, and little on events bridging late larval and early juvenile periods. Observations on 68 taxa of Caribbean coral reef fishes before and during settlement revealed the existence of a distinct post-settlement life phase called the transition juvenile, associated with the act of recruitment. Transition juveniles were found as solitary individuals, in conspecific groups, or in heterospecific groups. The groups were either uniform or heterogenous in appearance. The complexity of the transition phase and its apparently widespread occurrence in coral reef fishes suggests that important aspects of population structure may be determined between settlement and first appearance as a full-fledged juvenile.     

The effects of seaweed harvesting on fishes: a critique

Synopsis Black & Miller (1991) concluded that there was no large impact of an experimental harvest of rockweed,Ascophyllum nodosum, on fishes. A critique of their study demonstrates that this conclusion cannot be substantiated by their data because of sampling biases, errors in experimental design and low statistical power. Further, evidence is presented which supports the hypothesis that rockweed may provide an important nursery habitat for juvenile fishes.     

Evolutionary divergence in common marine ectoparasites Gnathia spp. (Isopoda: Gnathiidae) on the Great Barrier Reef: phylogeography, morphology, and behaviour

The blood‐feeding juvenile stages of gnathiid isopods are important ectoparasites of marine fishes on the Great Barrier Reef (GBR), and are a major component of the diet of cleaner fishes. We report here that these gnathiids have undergone evolutionary diversification, both geographically and temporally (into diurnally and nocturnally active taxa), which has been accompanied by changes in their morphology and behaviour. To perform this analysis, we sequenced a portion of the nuclear ribosomal ITS2 for 47 gnathiids collected from 29 host fishes of 11 species at three locales spanning 2000 km on the GBR. Maximum parsimony and Bayesian phylogenetic analyses both revealed four major clades. There was some degree of geographical structuring in these clades, but there was no evidence supporting host fish specialization, as gnathiids collected from the skin of different teleost taxa did not resolve into distinct clades. The topology of the phylogeny also implied some structuring that was dependent upon collection time (day or night), so we investigated whether there were also behavioural and morphological differences between taxa active at these different times. Nocturnal gnathiids had significantly longer antennules and larger eyes than diurnal gnathiids – two traits presumably adaptive for nocturnal activity. Behavioural tests showed that both nocturnal and diurnal gnathiids use olfaction and vision while foraging, but that nocturnal gnathiids used olfaction more often in dark conditions, and that they were able to perceive movement under extremely low levels of light. Diurnal gnathiids used vision more effectively when there was some ambient light. Our results thus suggest that both phenotypic and genotypic divergence in gnathiids may be influenced by natural selection acting on ecological traits, such as predator avoidance and host detection. © 2008 The Linnean Society of London, Biological Journal of the Linnean Society, 2008, 94 , 569–587.     

A mass mortality of fishes caused by receding water levels in the vegetated littoral zone of the West Kleinemonde Estuary,South Africa

On 15 November 2017 the mouth of the West Kleinemonde Estuary breached following heavy catchment rains and increased river flow. The water level in the estuary following mouth opening decreased by 1.65 m within 24 h, resulting in an almost complete draining of the littoral zone where large beds of the aquatic macrophyte Ruppia cirrhosa and mats of the associated filamentous algae were present. As the water depth within the plant beds decreased, the macrophytes, together with the algal filaments, created an increasingly dense mat, trapping fish that were resident, foraging or passing through the littoral zone. By 16 November 2017 large numbers of fishes belonging to at least 20 species were trapped in pools and depressions within the littoral, as well as within the R. cirrhosa beds and filamentous algal mats in the lower reaches of this system. Other affected taxa included crustaceans, especially isopods, and large numbers of small bivalves attached to macrophyte vegetation. Beneficiaries of the fish kill, in terms of unexpected food availability, included a variety of piscivorous bird species and the Cape clawless otter Aonyx capensis. This is the first documented account of a diverse species fish kill associated with estuary mouth breaching.     

Diet changes in vertical distributions of larval fishes in unstratified coastal waters off southeastern Australia

Larval fishes were sampled at four depth strata during the dayand night at two locations in unstratified (winter) inner continentalshelf waters off Sydney, Australia, in May and June 1993. Assemblagesat both locations and in both sampling periods were stronglydepth stratified during the day; however, this structure weakenedat night with most taxa being found throughout the entire watercolumn. Two daytime patterns of larval fish vertical distribution(surface and deep dwellers) were evident, and taxon-specificdaytime vertical distributions were strong and not dependenton thermal stratification of the water column. Most larvae caughtwere preflexion and there was little evidence of ontogeneticdifferences in vertical distributions. For most taxa, the patternsof diel change in vertical distribution were similar at bothlocations and in both sampling periods.     

The influence of habitat and adults on the spatial distribution of juvenile corals

Population distributions are affected by a variety of spatial processes, including dispersal, intraspecific dynamics and habitat selection. Within reef‐building coral communities, these processes are especially important during the earliest life stages when reproduction provides mobility among sessile organisms and populations experience the greatest mortality bottlenecks both before and immediately after settlement. Here, we used large‐area imaging to create photomosaics that allowed us to identify and map the location of 4681 juvenile (1–5 cm diameter) and 25 902 adult (>5 cm diameter) coral colonies from eight 100‐m² plots across the forereef of Palmyra Atoll. Using metrics of density, percent cover and the relative location of each colony within each plot, we examined abundance and spatial relationships between juvenile and adult coral taxa. Within coral taxa, juvenile density was generally positively related to the numerical density and percent cover of adults. Nearest neighbor analyses showed aggregation of juveniles near adults of the same taxon for two of the focal taxa (Pocillopora and Fungiids), while all other taxa showed random spatial patterning relative to adults. Three taxa had clustered distributions of juveniles overall. Additionally, we found that on a colony level, juveniles for five of nine focal taxa (accounting for >98% of all identified juveniles) associated with a specific habitat type, with four of those five taxa favoring unconsolidated (e.g. rubble) over consolidated substrata. The general lack of clustering in juvenile corals contrasts with consistent clustering patterns seen in adult corals, suggesting that adult spatial patterns are largely driven by processes occurring after maturity such as partial colony mortality, including fission and fragmentation. The association of many taxa with unconsolidated habitat also suggests that corals may play an important role in colonizing natural rubble patches that could contribute to reef stabilization over time.     

Comparison of sampling methods of Aphis glycines predators across the diel cycle

Nocturnal predators are often overlooked in biological control studies, despite evidence that they can make important contributions to insect pest suppression in agroecosystems. Many sampling methods are only employed during the daytime hours due to limitations of time and labour. Additionally, different sampling methods can provide contrasting information about natural enemy community composition and relative abundance. Here, we use Aphis glycines and its arthropod predators as a model system to compare natural enemy community composition described by vacuum samples, direct observations and video observations across the diel cycle in soybean. All sampling methods identified several common taxa. Anthocorids were dominant in vacuum samples and direct observations, and both methods indicated that this taxa may be more active in the afternoon. In contrast, anthocorids were recorded infrequently on video, possibly due to their small size. On video samples, lacewing larvae were the most active taxa during the day and lacewing larvae, spiders, opiliones and carabids were the most active taxa at night. We directly observed 22 predation events on soybean aphid: 17 by anthocorids, two by chrysopid larvae, and one each by a coccinellid, spider and predatory mite. The differences between the sample methods suggest that vacuum samples may represent predator abundance more accurately, while video data may miss small predators, but can be used to better assess relative time spent foraging.     

Mesh size and collection characteristics of 50-cm diameter conical plankton nets

This paper compares collection characteristics of #2-(363 µm), #10-(156 µm), and #20-(76 µm) mesh conical plankton nets: dimensions were 50-cm diameter by 1.6-m long. The #2-mesh net severely underestimated the abundances of Lake Michigan copepods and cladocerans with the exception of the largest species (Limnocalanus macrurus). Zooplankton abundance estimates were more similar for the #10- and #20-mesh nets collections. Nauplii, however, were severely undersampled by the #10-mesh net with abundance estimates approximately 8 to 12 times lower than for the #20-mesh net collections. Most other larger zooplankton were 50% more abundant in the 20-mesh net collections than in the #10-mesh net collections: such consistent differences occurred despite large variations in taxa size. This indicates that a sampling bias occurred other than the loss of zooplankton through the meshes of the #10 net. We hypothesize that, by incorrectly locating the flowmeter in the mouth of the plankton net, we underestimated the volume of water filtered by the easily-clogged #20-mesh net and therefore overestimated taxa abundances. We conclude that the #10-mesh net provided accurate estimates of microcrustacean zooplankton abundances except for nauplii. The #10-mesh net used in our study had a filtration area ratio of 3.06 and operated at a calculated average filtration efficiency of 98%. The #20-mesh net had a filtration area ratio of 1.86 and operated at calculated average filtration efficiencies ranging from 64.7% (41.7 m station) to 79.6% (6.3 m station). Calculations are presented which show how the filtration efficiencies of the nets used in our study could be improved by net redesign.     

Effects of landscape setting on oyster reef structure and function largely persist more than a decade post‐restoration

Long‐term monitoring is vital to understanding the efficacy of restoration approaches and how restoration may enhance ecosystem functions. We revisited restored oyster reefs 13 years post‐restoration and quantified the resident and transient fauna that utilize restored reefs in three differing landscape contexts: on mudflats isolated from vegetated habitat, along the edge of salt marsh, and in between seagrass and salt marsh habitat. Differences observed 1–2 years post‐restoration in reef development and associated fauna within reefs restored on mudflats versus adjacent to seagrass/salt marsh and salt marsh‐only habitats persisted more than 10 years post‐restoration. Reefs constructed on open mudflat habitats had the highest densities of oysters and resident invertebrates compared to those in other landscape contexts, although all restored reefs continued to enhance local densities of invertebrate taxa (e.g. bivalves, gastropods, decapods, polychaetes, etc.). Catch rates of juvenile fishes were enhanced on restored reefs relative to controls, but to a lesser extent than directly post‐restoration, potentially because the reefs have grown vertically within the intertidal and out of the preferred inundation regime of small juvenile fishes. Reef presence and landscape setting did not augment the catch rates of piscivorous fishes in passive gill nets, similar to initial findings; however, hook‐and‐line catch rates were greater on restored reefs than non‐reef controls. We conclude that ecosystem functions and associated services provided by restored habitats can vary both spatially and temporally; therefore, a better understanding of how service delivery varies among landscape setting and over time should enhance efforts to model these processes and restoration decision‐making.     

Small-scale temporal variability in assemblages of larval fishes: implications for sampling

Short-term changes in the assemblages of larval fishes in watersover the inner continental shelf off Sydney (Australia) wereexamined.This was done to highlight the potential sampling problemof confounding short-term variability with longer-term and spatialvariability in plankton communities. Assemblages at the surfaceand at 30 m depth were sampled twice a day over consecutivedays at two locations 5 km apart. The assemblages and the densitiesof individual taxa varied greatly between sampling times anddays. The small-scale temporal changes in densities of larvaewere not the same at both locations or between depths. Largeand consistent depth-related differences in assemblages andabundances of most taxa were evident. The consequences of small-scaletemporal variations are discussed relative to the design ofsampling programs for ecological and environmental purposes.Studies that include the double sampling of some stations arerecommended. Greater emphasis needs to be placed on fine-scaleoceanography and larval behaviour to determine causative mechanismsof short-term changes in assemblages of larval fishes.     

Spatial and temporal variations in densities of small fishes across different temporary floodplain types of the lower Okavango Delta,Botswana

Small-sized and juvenile fishes as well as physicochemical water parameters in various primary, secondary and rarely flooded temporary floodplains of the Okavango Delta were assessed during the different hydrological phases of the 2009–2010 flooding season. Small fishes were sampled in the marginal zone of the floodplains using a throw-trap net and a suite of physicochemical properties were measured. Both physicochemical water quality parameters and densities of small fishes showed spatiotemporal variations across the temporary floodplain types. Turbidity, dissolved oxygen, conductivity, woody debris and chlorophyll a were all highest in rarely flooded floodplains compared to both primary and secondary floodplains (ANOVA, p < 0.05). Fish from 38 fish taxa belonging to 11 families were identified and classified during the study. The fish families Cichlidae (dominated by tilapias), Poeciliidae (Aplocheilichthys spp.) and Cyprinidae (Barbus spp.), were the most abundant across the study floodplains. The poeciliids were most abundant in frequently flooded primary and secondary floodplains, whereas juvenile cichlids dominated in rarely flooded floodplains. During high floods the rarely flooded portions of the delta function as important nursery habitats for juvenile cichlids, implying that a significant reduction in flooding may have negative effects on the delta's tilapia stocks due to reduced recruitment success.     

Fish assemblages on artificial and natural reefs in the Flower Garden Banks National Marine Sanctuary, USA

 Visual censusing was used to characterize fish assemblages on artificial and natural reefs located within the boundaries of the Flower Garden Banks National Marine Sanctuary (FGBNMS) in the northwestern Gulf of Mexico. Emphasis was placed on determining spatial and temporal patterns in habitat utilization by fishes on an offshore artificial reef (Mobil Platform HI-A389A). Overall, 43 species were observed during diurnal surveys in the upper 24 m of the artificial reef. Midwater pelagic fishes (i.e., carangids and scombrids) accounted for over 50% of all taxa enumerated on the artificial reef; however, these taxa were transient members of the assemblage and were observed infrequently. Labrids, pomacentrids, and serranids were the dominant reef-dependent taxa. Distinct trends in vertical, diel, and seasonal abundances were observed for juvenile and adult fishes. Of the three designated depth zones (upper 1.5–9.0, middle 9.0–16.5; lower 16.5–24.0 m), abundance and species diversity were lowest in the upper zone. Nocturnal counts were characterized by a marked reduction or complete absence of most species, due in part to twilight cover-seeking and movement activities. Seasonal variation in community composition and species abundance (May versus September) was primarily due to recruitment of juveniles (0-age fishes) to the artificial reef in late summer. Increases in total fish abundance (all taxa combined) coincided with both increasing habitat rugosity and degree of fouling. Species richness on natural coral reefs in the FGBNMS was higher than on the artificial reef. Unlike the artificial reef, fish assemblages on the natural reefs were dominated by a single family (Pomacentridae) which accounted for over 50% of all individuals observed. Accepted: 1 August 1996     

Linnaean fish specimens in the Swedish Museum of Natural History, Stockholm

Specimens of fish in the Naturhistoriska riksmuseet, Stockholm, which are type specimens of species described by Linnaeus are listed. A total of 94 taxa is represented in the collection. The sources for the typification of each taxon are given and the existence of type material in other collections is noted. A short history of this collection of fishes is given as it relates to confirmation of the original nature of the specimens.
Most of the taxa represented came from the collection of King Adolf Fredrik (1710–1771) and were described by Linnaeus in the Museum Adolphi Friderici Volumes 1 and 2 (1754a, 1764) or from Fredrick Hasselqvist's (1722–1752) collections in North Africa and the Mediterranean borderlands.