Rotifer communities from some Araucanian lakes of southern Chile

During the last decade much information has been produced about the zooplankton communities in southern Chile; however, most of this is related to the crustacean assemblages. The present communication examines the spatial and temporal distribution of rotifer assemblages and their relation to the environmental variables during one-year period in four Araucanian lakes. A total of 19 species was found in these oligotrophic lakes. Keratella cochlearis, Synchaeta stylata, Trichocerca porcellus, Conochilus unicornis and Collotheca pelagica were widespread, and seven species exhibited a more restricted distribution among the lakes. Species richness varied from 6 to 12; similarly, one or two dominant species usually accounted for more than 80% of the total annual abundance. Similar dominant species occurred in two lakes, but their maximum peaks of abundance differed in time; in the remaining lakes the most important species were different. Calculated rotifer diversity showed a fluctuating pattern, with low values during the year in three lakes, and high ones in Lake Llanquihue. Species diversity was significantly related to species richness in all lakes. Discriminant analysis based on the occurrence and abundances of species throughout the year revealed that the rotifer assemblage in Lake Llanquihue was different from that in the rest of the Araucanian lakes. Furthermore, the same analysis using environmental variables showed that this lake is clearly discriminated from the others on the basis of the ionic composition of the water (i.e. Cl^–, Na⁺, Mg²⁺). Rotifer abundances in these lakes were significantly influenced by a number of abiotic variables, including those related to water ionic composition. These relationships may imply that the small differences in chemical characteristics of these lakes influence the structure of the rotifer community.     

Exploring trophic niches and parasite communities of sympatric Arctic charr and brown trout populations of southern Norway

Hydrobiologia - Catchment-scale variation between lake habitats has the potential to simultaneously influence the trophic niche and parasite community of fish hosts. In this study, we investigated...     

An operculum of the Silurian nautiloid Aptychopsis from Arctic Canada

Three articulated valves of the genus Aptychopsis are interpreted as the operculum of a nautiloid. The valves are joined by an organic film which covers the entire dorsal valve. This genus has not been previously reported from North America.     

Species-area relationship and environmental predictors of fish communities in coastal freshwater wetlands of southern Brazil

In the Neotropics where fragmentation is common, environmental factors structuring fish communities are poorly known. In this study two hypotheses were tested in 13 coastal wetlands of southern Brazil: 1) physical features (such as wetland area, habitat diversity, water depth and temperature, and water and sediment chemistry) are important determinants of richness, density and composition of fish assemblages; and 2) species richness and composition of fish assemblages differ between wetlands with different hydroperiods (i.e. permanent versus intermittent). A total of 1,597 individuals distributed among 20 species were collected. Richness was positively associated with wetland area and water depth and it was negatively associated with water conductivity. The species-area power function explained 27.3% of the variation in richness. Fish richness was similar between permanent and intermittent wetlands. The density was negatively associated with water depth and temperature, and it was positively correlated with water nitrate concentration. The first three axes from the CCA accounted for 55.5% of total variation in fish composition. The most important variables related to fish composition were percentage of sediment organic matter, phosphorus concentration, habitat diversity and water depth. Composition of fish species changed among permanent and intermittent wetlands. Understanding the environmental factors that shape and maintain the biodiversity in these ecosystems is essential to develop conservation and management programs of wetlands in this region, where more than 90% of wetland systems have already been lost due to anthropogenic activities.     

Structure of communities of Elateridae family of subzones of middle and southern taiga under technological environmental impact

The structure of communities of Elateridae was investigated in the regions affected by coppersmelting plants in the areas located in different ecological and geographical subzones of the taiga zone. A comparison of emission sources of the same kind in forest ecosystems of different taiga subzones allowed us to analyze changes in the structural arrangement of Elateridae complexes along the gradient of chemical pollution, to reveal adaptive mechanisms of Elateridae complexes to high industrially generated load, to observe general and specific zonal features of the reaction of click beetles to this kind of anthropogenic action. We succeeded in demonstrating that the latitudinal zoning is a base of the hierarchy of the factors that determine the structural divergence of the Elateridae communities. The hydrothermal regime of the middle taiga subzone under anthropogenic modification provides more favorable conditions for mesophile groups of pedobionts in comparison with the southern taiga.     

Impact of environmental manipulation for Anopheles pseudopunctipennis Theobald control on aquatic insect communities in southern Mexico.

Extraction of filamentous algae from river pools is highly effective for the control of Anophelespseudopunctipennis in southern Mexico. We determined the magnitude of changes to the aquatic insect community following single annual perturbations performed over two years. In 2001, algae were manually removed from all the pools in a 3 km long section of the River Coatán, Mexico, while an adjacent section was left as an untreated control. In 2002, the treatments of both zones were switched and algal extraction was repeated. The abundance of An. pseudopunctipennis larvae + pupae was dramatically reduced by this treatment and remained depressed for two to three months. A total of 11,922 aquatic insects from ten orders, 40 families, and 95 genera were collected in monthly samples taken over five months of each year. Algal extraction did not reduce the overall abundance of aquatic insects in river pools, but a greater abundance and a greater richness of taxa were observed in 2002 compared to the previous year. This was associated with reduced precipitation and river discharge in 2002 compared to 2001. Shannon diversity index values were significantly depressed following algal extraction for a period of three months, in both years, before returning to values similar to those of the control zone. However, differences between years were greater than differences between treatments within a particular year. When insects were classified by functional feeding group (FFG), no significant differences were detected in FFG densities between extraction and control zones over time in either year of the study. Similarly, percent model affinity index values were classified as "not impacted" by the extraction process. Discriminant function analysis identified two orders of insects (Diptera and Odonata), water temperature, dissolved oxygen and conductivity, and river volume (depth, width, and discharge) as being of significant value in defining control and treatment groups in both years. We conclude that habitat manipulation represents an effective and environmentally benign strategy for control of An. pseduopunctipennis. Variation in precipitation and river discharge between years was much more important in determining aquatic insect community composition than variation generated by the filamentous algal extraction treatment.     

Structure and function of microbial communities in soil from the southern Taiga

General regularities in the structure of the microbial communities of southern taiga soil ecosystems and taxonomic differences between the microbial communities of soils with different hydrothermal characteristics are discussed with reference to the main types of soils of the Central State Forest Biosphere Reserve.     

Geochemical parameters of sedimentation and the distribution of Silurian brachiopod communities in Lithuania

Silurian rocks from borehole cores in the Baltic Basic were analyzed for Si, Al, Ti, Fe, Ca and Mg oxide content and chemical data were related to sedimentary environment, lithology and brachiopod community distribution. Evaluation of these relationships enables precise positioning of closely related communities within Boucot's (1975) brachiopod Benthic Assemblages. Preliminary attempts are made to evaluate climatic change based on Al/Ti oxide ratios.     

An efficient strategy for screening large cloned libraries of amplified 16S rDNA sequences from complex environmental communities

We propose a strategy for the efficient screening of large libraries of amplified 16S rRNA genes from complex environmental samples. It consists of processing sets of multiple clones simultaneously. This strategy saves up to 90% of the costs and labor spent in the process of screening a 16S rDNA library.     

Microbial sequences retrieved from environmental samples from seasonal Arctic snow and meltwater from Svalbard, Norway

16S rRNA gene (rrs) clone libraries were constructed from two snow samples (May 11, 2007 and June 7, 2007) and two meltwater samples collected during the spring of 2007 in Svalbard, Norway (79°N). The libraries covered 19 different microbial classes, including Betaproteobacteria (21.3%), Sphingobacteria (16.4%), Flavobacteria (9.0%), Acidobacteria (7.7%) and Alphaproteobacteria (6.5%). Significant differences were detected between the two sets of sample libraries. First, the meltwater libraries had the highest community richness (Chao1: 103.2 and 152.2) and Shannon biodiversity indices (between 3.38 and 3.59), when compared with the snow libraries (Chao1: 14.8 and 59.7; Shannon index: 1.93 and 3.01). Second, ∫-LIBSHUFF analyses determined that the bacterial communities in the snow libraries were significantly different from those of the meltwater libraries. Despite these differences, our data also support the theory that a common core group of microbial populations exist within a variety of cryohabitats.     

Exploring the association between Trypanosoma cruzi infection in rural communities and environmental changes in the southern Gran Chaco

The association between land use and land cover changes between 1979-2004 in a 2.26-million-hectare area south of the Gran Chaco region and Trypanosoma cruzi infection in rural communities was analysed. The extent of cultural land, open and closed forests and shrubland up to 3,000 m around rural communities in the north, northwest and west of the province of Córdoba was estimated using Landsat satellite imagery. The T. cruzi prevalence was estimated with a cross-sectional serological survey conducted in the rural communities. The land cover showed the same patterns in the 1979, 1999 and 2004 satellite imagery in both the northwest and west regions, with shrinking regions of cultured land and expanding closed forests away from the community. The closed forests and agricultural land coverage in the north region showed the same trend as in the northwest and west regions in 1979 but not in 1999 or 2004. In the latter two years, the coverage remote from the communities was either constant or changed in opposite ways from that of the northwest and west regions. The changes in closed forests and cultured vegetation alone did not have a significant, direct relationship with the occurrence of rural communities with at least one person infected by T. cruzi. This study suggests that the overall decrease in the prevalence of T. cruzi is a consequence of a combined effect of vector control activities and changes in land use and land cover.     

Ethnobotany in a coastal environmental protected area: shifts in plant use in two communities in southern Brazil

Background

We investigated local knowledge of plants in terms of plant use shifts and losses, in two coastal communities within a protected area in southern Brazil. Our hypothesis is that people’s livelihoods are associated with different ethnobotanical knowledge, and changes in these activities can reflect shifts in ethnobotanical knowledge such as stopping using some plants.

Methods

We interviewed 125 inhabitants after prior informed consent, asking her/him about their socioeconomic profile and to free list the plants they know. The free lists were analyzed by frequency of cited plants. To compare averages of cited plants and age in both communities, we used the Wilcoxon test with a significance of 5%. Spearman correlation was tested with number of plants cited in the past and the interviewees’ age. Permanence and change in economic activities in each community were represented using a graph and compared through a chi-squared test with a significance of 5%. Qualitative analyses of the interviews and a field diary were used to analyze driving forces for the abandonment of used plants.

Results

We identified 231 plant species that were currently used mainly for food and medicine. Despite being in a protected area, most of the cited plants were exotic and cultivated in home gardens. We do not confirm the hypothesis that changes in livelihoods are reflected in the plants used; however, qualitative analyses showed potential drivers for shifts and losses of plant use. “Environmental law” and “protected area” were the drivers most related to the abandonment of plant use.

Conclusions

While recognizing the importance of the protected area to maintain local people and their traditions, we documented a shift in plant use that is mainly correlated to construction activities that disappeared from daily practices.

     

Adaptation of bacterial communities to environmental transitions from labile to refractory substrates

The aim of this work was to assess the adaptation of bacterial communities to environmental transitions from labile to refractory substrates. This involved testing the hypothesis that bacteria self-organize and propagate not only as individual cellular systems, but also as functional sets of interacting organisms. A biofilm community was cultivated in a flow-cell irrigated with tryptic soy broth and subjected to a cyclic series of environmental transitions, from labile to refractory substrates, followed by a period of starvation (30 days). The appearance and disappearance of specific colony morphotypes when the emigrants were plated onto tryptic soy agar was used to monitor the restructuring of the community. Confocal laser microscopy of flow cells showed that these transitions decreased the biofilm thickness and coverage. Substrate shifts also changed the architecture of the biofilm communities. Repeated inoculation of flow-cell communities with a composite inoculum increased the number and diversity of emigrants. Their biofilms were thicker and covered a wider area than those of communities that had been inoculated only at the beginning of the experiment. With repeated inoculation, the time required for the community to restructure and stabilize decreased during most transitions. This suggested that organismal recombination acted as a mechanism of adaptation, enhancing the growth of microbial communities exposed to environmental stresses. Changes in the profiles of emigrants during the adaptation of biofilm communities to environmental transitions showed the appearance and disappearance of discrete sets of organisms. This suggested that the biofilm communities responded to environmental stresses as sets of interacting organisms. Enhanced growth of biofilm communities due to repeated environmental cycling suggested that the functionality of cellular positioning accrued from one cycle to the next and was thus heritable, although it was not necessarily genetically encoded.     

Endophyte communities vary in the needles of Norway spruce clones

Endophytic fungi show no symptoms of their presence but can influence the performance and vitality of host trees. The potential use of endophytes to indicate vitality has been previously realized, but a standard protocol has yet to be developed due to an incomplete understanding of the factors that regulate endophyte communities. Using a culture-free molecular approach, we examined the extent to which host genotype influences the abundance, species richness, and community composition of endophytic fungi in Norway spruce needles. Briefly, total DNA was extracted from the surface-sterilized needles of 30 clones grown in a nursery field and the copy number of the fungal internal transcribed spacer (ITS) region of ribosomal DNA was estimated by quantitative PCR. Fungal species richness and community composition were determined by denaturing gradient gel electrophoresis and DNA sequencing. We found that community structure and ITS copy number varied among spruce clones, whereas species richness did not. Host traits interacting with endophyte communities included needle surface area and the location of cuttings in the experimental area. Although Lophodermium piceae is considered the dominant needle endophyte of Norway spruce, we detected this species in only 33 % of samples. The most frequently observed fungus (66 %) was the potentially pathogenic Phoma herbarum. Interestingly, ITS copy number of endophytic fungi correlated negatively with the richness of ectomycorrhizal fungi and thus potential interactions between fungal communities and their influence on the host tree are discussed. Our results suggest that in addition to environmental factors, endophyte communities of spruce needles are determined by host tree identity and needle surface area.     

Effects of solar UV-B radiation on canopy structure of Ulva communities from southern Spain

Within the sheltered creeks of Cádiz bay, Ulva thalli form extended mat-like canopies. The effect of solar ultraviolet radiation on photosynthetic activity, the composition of photosynthetic and xanthophyll cycle pigments, and the amount of RubisCO, chaperonin 60 (CPN 60), and the induction of DNA damage in Ulva aff. rotundata Bliding from southern Spain was assessed in the field. Samples collected from the natural community were covered by screening filters, generating different radiation conditions. During daily cycles, individual thalli showed photoinhibitory effects of the natural solar radiation. This inhibition was even more pronounced in samples only exposed to photosynthetically active radiation (PAR). Strongly increased heat dissipation in these samples indicated the activity of regulatory mechanisms involved in dynamic photoinhibition. Adverse effects of UV-B radiation on photosynthesis were only observed in combination with high levels of PAR, indicating the synergistic effects of the two wavelength ranges. In samples exposed either to PAR+UV-A or to UV-B+UV-A without PAR, no inhibition of photosynthetic quantum yield was found in the course of the day. At the natural site, the top layer of the mat-like canopies is generally completely bleached. Artificially designed Ulva canopies exhibited fast bleaching of the top layer under the natural solar radiation conditions, while this was not observed in canopies either shielded from UV or from PAR. The bleached first layer of the canopies acts as a selective UV-B filter, and thus prevents subcanopy thalli from exposure to harmful radiation. This was confirmed by the differences in photosynthetic activity, pigment composition, and the concentration of RubisCO in thalli with different positions within the canopy. In addition, the induction of the stress protein CPN 60 under UV exposure and the low accumulation of DNA damage indicate the presence of physiological protection mechanisms against harmful UV-B. A mechanism of UV-B-induced inhibition of photosynthesis under field conditions is proposed.     

Intra-annual tracheid formation of Norway spruce provenances in southern Finland

We studied the intra-annual wood formation in a Norway spruce provenance experiment in southern Finland from 2004–2008. Two Finnish provenances, northern and southern, as well as German and Hungarian provenances were included. Timing of tracheid formation and differentiation, and tracheid dimensions were determined from periodically extracted microcores. The aim was to determine the differences between the years and provenances in the timing of the xylogenesis and in the xylem characteristics. Year-to-year variation was high both in timing of tracheid formation and xylem characteristics, while between-provenance differences were small. The onset of tracheid formation varied from early May to late June in different trees in different years. The onset of tracheid formation was not closely related to the annual variations of temperature sum. In all the years, daily temperatures exceeded the threshold +5°C for several weeks before the onset of tracheid formation. The highest tracheid formation rate occurred after the summer solstice in all years and generally coincided with the highest daily temperatures during the growing season. Tracheid production ceased early in 2006 due to a mid-summer drought. Cell differentiation continued late in autumn as non-mature tracheids were still observed around mid-September. No clear differences between the provenances in the timing of tracheid formation were observed, although the Finnish provenances tended to initiate tracheid formation slightly earlier than the other provenances. The tree-ring widths of the Finnish provenances were also wider, while tracheid diameter of the German provenance was slightly smaller. Our results indicate that between-tree variation in the timing of wood formation is high compared with the latitude effect of seed source.