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1.
An uppermost Triassic–lowermost Jurassic carbonate platform succession, which is 430 m thick, in northwestern Sicily is described with the aim to provide new data on the sedimentological and biological variations across the Triassic–Jurassic boundary in peritidal environments. The studied succession belonged to the rimmed carbonate shelf that developed during the Late Triassic along the margins of the Ionian Tethys. The peritidal sediments consist of meter-scale shallowing-upward cycles formed by subtidal, intertidal, and supratidal facies. Three main informal units are differentiated along the section on the basis of the variations recorded by the subtidal facies. The lower and middle units are attributed to the Rhaetian, on the basis of the common presence of the foraminifer Triasina hantkeni, associated with several benthic foraminifers, such as Aulotortus sinuosus and Auloconus permodiscoides. Megalodontids are particularly abundant and large in the lower unit, whereas they become rare in the middle unit and disappear in the upper unit. The last occurrence of T. hantkeni, along with the disappearance of the benthic foraminifer fauna, and the bloom of the calcareous alga Thaumatoporella parvovesiculifera is assumed as a proxy of the Rhaetian–Hettangian boundary. Recovery biota during the early Jurassic occurs about 20 m upward of the boundary zone, marked by the appearance of benthic foraminifers, such as Siphovalvulina sp. The observed biostratigraphic signature in the studied section is easily comparable to similar Tethyan sections already described from Italy, Greece, and Turkey; thus, it is believed that the faunistic turnover does not reflect local facies variations, in response to changes in the accommodation space of the platform, but regional changes in a more wide area of ocean Tethys.  相似文献   

2.
The following paper describes the foraminiferal fauna and associated faunal assemblages of the bedded and reef carbonates of the Upper Triassic (most probably Rhaetian) Nayband Formation, which are exposed in a section south of the small town of Bagher-Abad, northeast of Esfahan. Foraminifers are extremely rare in sponge- or coral-dominated bioconstructions and in the bedded carbonates of the Nayband Formation in central Iran. Some carbonate beds are composed of bioclastic wackstone/packstone. These are exposed in the solenoporacean horizon at the uppermost part of the section. Here, the aulotortid- and trocholinid-type foraminifers are relatively abundant. The following foraminiferal taxa with different abundances were found within the carbonates of the investigated section: Trocholina umbo Frentzen, T. turris Frentzen, T. gracilis Blau, Aulotortus tumidus (Kristan-Tollmann), Aulotortus tenuis (Kristan), Aulotortus friedli (Kristan-Tollmann), Coronipora etrusca (Pirini), Semiinvoluta clari Kristan, Turrispirillina? licia variabilis Blau, Galeanella? laticarinata Al-Shaibani, Carter and Zaninetti, Ophthalmidium sp., Agathammina sp., “Sigmoilinaschaeferae Zaninetti, Planiinvoluta carinata Leischner, Planiinvoluta sp., Nubecularia sp., Endothyra sp., Paeolituonella sp. and some sessile agglutinated and nodosariid types. All mentioned taxa are very rare, except the involutinid and trocholinid types. The following species are described as new: Trocholina blaui nov. sp., Spirilina? iranica nov. sp., and Coronipora serraforma nov. sp. Trocholina blaui is usually attached to solenoporacean thalli. Four foraminiferal associations, which are named after the occurrence of the abundant species, were distinguished as Aulotortus tumidus association, Aulotortus friedli association, Trocholina umbo association, and Trocholina blaui association. Aulotortid types and Trocholina umbo were found within the bioclastic wackstone/packstone carbonates. Trocholina blaui is abundant in solenoporacean framestones. The foraminiferal association of investigated carbonates contains a mixed fauna, known from Upper Triassic–Liassic in the Tethyan realm. Carbonates of the whole investigated section are dated—due to occurrence of the genus Aulotortus, with species A. tumidus (Kristan-Tollmann), A. tenuis (Kristan), and A. friedli (Kristan-Tollmann)—as Upper Triassic (most probably Rhaetian). The “typical” foraminifers occurring in the reef biotopes in the northwestern Tethys are either missing or extremely rare in the Iranian bioconstructions.  相似文献   

3.
In the Upper Jurassic reef successions of the Crimean Peninsula (Sudak and Jalta areas), the microencruster Crescentiella morronensis (Crescenti), microbialites, and multiple generations of cements, form microframeworks. They were observed in two stages of the carbonate platform evolution, in the Middle–Upper Oxfordian, and in the Upper Kimmeridgian–Tithonian. Generally, in both stages, the features of the microframeworks are similar and consist of densely packed Crescentiella associated with microbialites and branched colonies of the sclerosponge Neuropora lusitanica Termier. The difference between the occurrences of the two stages is the variable amount of nubecularid foraminifera and enigmatic tube-shaped structures forming the central cavities of Crescentiella. The Crescentiella-microbial-cement microframeworks formed under phreatic conditions in the upper slope and seaward marginal depositional settings where intensive synsedimentary cementation took place. They formed in the initial stages of long cycles of restoration and blooming of the reefs. The late Jurassic examples resemble the Permian algae-microbial-cement reefs as well as the Triassic Tubiphytes and cement crust-dominated reefs. Concurrently, all these examples formed a transitional facies zone between typical slope facies to shallow subtidal platform margin facies characterized by high taxonomic diversity of calcified sponges, corals, and microencrusters forming the principal part of the reefs.  相似文献   

4.
Four lithofacies and 12 microfacies types recognized in an upper Aptian section in the Sierra de Bedmar-Jódar (Prebetic of Jaén) represent shallow lagoonal environments (marl and marly limestone) and sand bars that delimited the lagoon. The lagoonal facies reflect subtidal restricted water circulation with low energy. The sand bar facies (intertidal environment) have upper surfaces that show the effects of supratidal and subaerial conditions. The presence of early fractures in particular lithofacies shows the importance of local synsedimentary tectonics during sedimentation. Thalassinoides, ?Arenicolites, Diplocraterion, Circolites, Gastrochaenolites and Trypanites are recorded in different beds of this section, reflecting various states of substrate consistency, in the form of firmground, hardground, and rockground. Whereas firmground conditions were dominant in the lower part of the section, hardgrounds and rockgrounds are mainly present in the upper part of the section. Four types of shallowing-upward elementary sequence are recognized. All the sequences show at the base mudstone or wackestone microfacies representing a lagoonal environment, overlain by sand-bar grain-pack-stone facies corresponding to a bar bounding the lagoon. The factors that controlled their development were carbonate production and tectonic movements.  相似文献   

5.
Partial or complete sterility is an obvious feature in triploid Pacific oyster (Crassostrea gigas) which contributes to improving rearing performances. Despite the significance of sterility, the molecular mechanism behind it remains elusive and related research was limited. This study focused on six reproduction-related genes and compared their different behavior in gene expression and DNA methylation pattern between triploid and diploid oysters in order to provide more molecular information. The gonadal development of triploid oyster was examined by histology before molecular analysis. Gametogenesis disturbance was observed in triploid oysters at different development stages (stage II and III) with more serious impairment in females. QPCR showed significant gene expression difference between diploid and triploid in two genes: putative Vg and cgER. Gene expression of putative Vg was delayed in triploids while for cgER triploid oyster showed higher expression and the difference was significant at stage III. DNA methylation pattern of these two genes were further investigated by bisulfite sequencing. Between diploid and triploid oysters, no difference was observed in total methylation level but some individual loci showed different patterns: significantly high methylation rate of loci 2284 in cgER was observed in triploid oyster which has a higher expression of this gene. This study indicated that putative Vg and cgER might play a role in partial sterile in triploid C. gigas. Gene expression could be regulated by the methylation pattern at specific individual locus, which deserves equivalent attention as well as total DNA methylation level.  相似文献   

6.
Since their recent introductions into Florida waters, three sessile invertebrates [Perna viridis (Asian green mussel), Mytella charruana (charru mussel) and Megabalanus coccopoma (pink titan acorn barnacle)] have expanded their range along the Atlantic coast in estuarine waters. Little research has been done to understand how these nonnative species interact with the ecologically and economically important eastern oyster Crassostrea virginica. To assess the potential effects of P. viridis, M. charruana and M. coccopoma on C. virginica, the following questions were addressed in manipulative experiments. (1) Does the presence of nonnative species decrease oyster larval settlement? (2) Do oyster larvae avoid settling on nonnative species? (3) Do nonnative species decrease survival of juvenile oysters (spat)? (4) Do nonnative species hinder spat growth? We included two controls: absence of nonnative species and presence of the native mussel Geukensia demissa. The nonnative species influenced settlement, growth and survival of C. virginica in different ways. M. coccopoma and P. viridis negatively influenced larval settlement, whereas M. charruana had no influence on the total number of settled larvae. Oyster larvae avoided settling on all three nonnative species and the native G. demissa. Both nonnative mussels negatively affected survival of juvenile oysters but only M. charruana also reduced spat growth. The native mussel, G. demissa, had no negative impacts on total settlement, survival and growth of C. virginica; in fact, it increased larval settlement in some trials. These three nonnative species should be classified as invasive because all had negative effects on native C. virginica.  相似文献   

7.
RNA interference is a powerful method to inhibit specific gene expression. Recently, silencing target genes by feeding has been successfully carried out in nematodes, insects, and small aquatic organisms. A non-invasive feeding-based RNA interference is reported here for the first time in a mollusk bivalve, the pacific oyster Crassostrea gigas. In this Trojan horse strategy, the unicellular alga Heterocapsa triquetra is the food supply used as a vector to feed oysters with Escherichia coli strain HT115 engineered to express the double-stranded RNA targeting gene. To test the efficacy of the method, the Clock gene, a central gene of the circadian clock, was targeted for knockout. Results demonstrated specific and systemic efficiency of the Trojan horse strategy in reducing Clock mRNA abundance. Consequences of Clock disruption were observed in Clock-related genes (Bmal, Tim1, Per, Cry1, Cry2, Rev.-erb, and Ror) and triploid oysters were more sensitive than diploid to the interference. This non-invasive approach shows an involvement of the circadian clock in oyster bioaccumulation of toxins produced by the harmful alga Alexandrium minutum.  相似文献   

8.
Understanding the environmental factors that affect the distribution and abundance of rare and threatened species can help identify priority sites for conservation action such as habitat management. The moth Cucullia lychnitis is identified in UK legislation as a priority species for conservation. Its conspicuous larvae feed on a patchily distributed host plant Verbascum nigrum, but are entirely absent from some host plant patches within the species’ range. Environmental variability among patches was investigated to understand factors affecting (i) patch occupancy by C. lychnitis and (ii) abundance of C. lychnitis, where present. Occupancy of individual V. nigrum plants within occupied patches was also investigated. The likelihood of patch occupancy increased with patch size, and decreased with patch isolation. Abundance of C. lychnitis was negatively correlated with patch isolation and with abundance of the weevil Cionus nigritarsis, which exploits the same host plant and may be a competitor. Within occupied patches, larvae of C. lychnitis were significantly more likely to be found on taller plants with more flower spikes; such plants are typical of established rather than newly-created patches. These results may help to guide efforts to conserve C. lychnitis, highlighting the importance of habitat connectivity and indicating potential management actions to promote features positively associated with larval incidence and abundance.  相似文献   

9.
10.
Invasive plants have wide-ranging impacts on native systems including reducing native plant richness and altering soil chemistry, microbes, and nutrient cycling. Increasingly, these effects are found to linger long after removal of the invader. We examined how soil chemistry, bacterial communities, and litter decomposition varied with cover of Euonymus fortunei, an invasive evergreen liana, in two central Kentucky deciduous forests. In one forest, E. fortunei invaded in the late 1990s but invasion remained patchy and we paired invaded and uninvaded plots to examine the associations between E. fortunei cover and our response variables. In the second forest, E. fortunei had completely invaded the forest by 2005; areas where it had been selectively removed by 2010 were paired with an adjacent invaded plot. Where E. fortunei had patchily invaded, E. fortunei patches had up to 3.5× nitrogen, 2.7× carbon, and 1.9× more labile glomalin in soils than uninvaded plots, whereas there were no differences in soil characteristics between invaded and removal plots. In the patchily invaded forest, bacterial community composition varied among invaded and non-invaded plots, whereas bacterial communities did not vary among invaded and removal plots. Finally, E. fortunei leaf litter decomposed faster (k = 4.91 year?1) than the native liana (k = 3.77 year?1), Vitis vulpina; decomposition of both E. fortunei and V. vulpina was faster in invaded (k = 7.10 year?1) than removal plots (k = 4.77 year?1). Our findings suggest that E. fortunei invasion increases the rate of leaf litter decomposition via high-quality litter, alters the decomposition environment, and shifts in the soil biotic communities associated with a dense mat of wintercreeper. Land managers with limited resources should target the densest mats for the greatest restoration potential and remove wintercreeper patches before they establish dense mats.  相似文献   

11.
Haslea ostrearia is a marine diatom known to produce marennine, a water-soluble blue-green pigment responsible for the greening of oysters in ponds along the French Atlantic coast. This phenomenon occurs seasonally when H. ostrearia blooms in oyster ponds, and it increases the economic value of cultured oysters. From an ecological perspective, H. ostrearia blooms are accompanied by a decrease in the abundance of other microalgae, suggesting that this diatom produces allelochemicals. Recent studies showed that purified marennine has other biological activities, for instance antioxidant, antibacterial, and antiviral activities, which could be used in aquaculture to promote this pigment as a natural antipathogen agent. One important issue regarding the possible use of H. ostrearia in aquaculture as a mixed algal diet, however, is the importance of marennine allelopathy. In this study, we investigated the allelopathic effect of H. ostrearia on the growth of five microalgal species relevant to aquaculture: Chaetoceros calcitrans, Skeletonema costatum, Phaeodactylum tricornutum, Tetraselmis suecica, and Tisochrysis lutea. Allelopathic tests were realized by co-culturing these microalgae with H. ostrearia in batch and in semi-continuous mode, based on initial biovolume ratios. Our findings showed that inhibition of the growth of microalgae due to the presence of H. ostrearia and marennine was species dependent. Skeletonema costatum, C. calcitrans, and T. lutea were significantly more sensitive, whereas T. suecica and P. tricornutum appeared to be more resistant. Growth irradiance significantly influenced the allelopathic effect against the sensitive species S. costatum, and the H. ostrearia production of marennine increases with irradiance. Data presented in this study partly support the hypothesis that marennine released into the culture medium possibly acts as an allelochemical compound, thus explaining the dominance of H. ostrearia and the loss of sensitive algae in oyster ponds, but also that some species are insensitive, which allows co-culturing and use in a mixed algal diet in aquaculture.  相似文献   

12.
Microalgae are ideal candidates for bioremediation and biotechnological applications. However, salinity and nutrient resource availability vary seasonally and between cultivation sites, potentially impacting on biomass productivity. The aim of this study was to screen pollutant-tolerant freshwater microalgae (Desmodesmus armatus, Mesotaenium sp., Scenedesmus quadricauda and Tetraedron sp.), isolated from Tarong power station ash-dam water, for their tolerance to cultivation at a range of salinities. To determine if biochemical composition could be manipulated, the effects of 4-day nutrient limitation were also determined. Microalgae were cultured at 2, 8, 11 and 18 ppt salinity, and nutrient uptake was monitored daily. Growth, total lipid, fatty acid (FA), and amino acid contents were quantified in biomass harvested while nutrient-replete and, after 4 days, nutrient-deplete. D. armatus showed the highest salinity tolerance actively growing in up to 18 ppt while Mesotaenium sp. was the least halotolerant with decreasing growth rates from 11 ppt. However, Mesotaenium sp. at 2 and 8 ppt had the highest biomass productivity and nutrient requirements of the four species, making it ideal for nutrient remediation of eutrophic freshwater effluents. Salinity and nutrient status had minimal influence on total lipid and FA contents in D. armatus and Mesotaenium sp., while nutrient depletion induced an increase of total lipid and FAs in S. quadricauda and Tetraedron sp., which was further increased with increasing salinity. As none of the growth conditions affected amino acid profiles of the species, these findings provide a basis for species selection based on site-specific salinity conditions and nutrient resource availability.  相似文献   

13.
14.
15.
We attempted to isolate lactic acid bacteria (LAB) from the marine oyster (Crassostrea gigas) and selected several environmental stress-resistant isolates for the development of a future probiotic adjuvant for marine aquaculture. Twenty-six presumptive LAB isolates were extracted from oysters and screened (by an agar diffusion assay) for antimicrobial activity toward various pathogens: Vibrio parahaemolyticus, Streptococcus iniae, and Edwardsiella tarda. Eight isolates had an antibacterial activity toward V. parahaemolyticus; in particular, 6 isolates showed a growth-inhibitory activity, with inhibition zone diameters > 15 mm. Of these, 5 isolates (JL17, JL18, JL28, HL7, and HL32) were also active against S. iniae and E. tarda. Enterococcus faecium HL7 was selected as the isolate most resistant to environmental stressors: the minimum NaCl, ethanol, and hydrogen peroxide concentrations at which HL7 cells lost their viability were 1.9 M, 11%, and 0.013%, respectively. When an antibiotic sensitivity test was performed on E. faecium HL7, this isolate was found to be resistant to trimethoprim/sulfamethoxazole, cephalothin, ampicillin, rifampin, gentamicin, cefotaxime, cefepime, cefotetan, nalidixic acid, and kanamycin. While the oyster model studies provided indication that E. faecium HL7 could be a good candidate as biocontrol agent against V. vulnificus, further optimization is needed in the actual animal rearing situation.  相似文献   

16.

Background and Aims

It was previously demonstrated that stolons of Fragaria vesca respond to patches of varying nutrient quality; however, the mechanism of patch-detection remained unknown. Here we provide support for a process by which F. vesca perceives nutrient-rich patches, consistent with nutrient foraging prior to rooting.

Methods

Volatile organic compounds (VOCs) emitted from unsterilized and sterilized field substrates were collected and analyzed by stir-bar headspace extraction gas chromatography-mass spectrometry using a method modified for soil and litter systems. Selected compounds were chosen to represent unsterilized and sterilized field substrates. These synthetic volatile compound mixtures were then applied to neutral substrate to test the ability of F. vesca to choose between unsterilized versus sterilized substrates.

Results

Primary stolons exhibited chemotropism towards unsterilized (natural) substrates and grew away from the sterilized volatile substrates when the alternate choice was a negative control. We conclude that the presence of carboxylic acids tends to stimulate stolon elongation and chemotropism while aldehydes, ketones and monoterpenes tend to suppress it.

Conclusions

We provide evidence that developing stolons of F. vesca forage for nutrient-rich patches via volatile cues similar to those emitted from the soil through microflora activity.
  相似文献   

17.
Nucleated pearls are produced by molluscs of the Pinctada genus through the biomineralisation activity of the pearl sac tissue within the recipient oyster. The pearl sac originates from graft tissue taken from the donor oyster mantle and its functioning is crucial in determining key factors that impact pearl quality surface characteristics. The specific role of related gene regulation during gem biogenesis was unknown, so we analysed the expression profiles of eight genes encoding nacreous (PIF, MSI60, PERL1) or prismatic (SHEM5, PRISM, ASP, SHEM9) shell matrix proteins or both (CALC1) in the pearl sac (N?=?211) of Pinctada margaritifera during pearl biogenesis. The pearls and pearl sacs analysed were from a uniform experimental graft with sequential harvests at 3, 6 and 9 months post-grafting. Quality traits of the corresponding pearls were recorded: surface defects, surface deposits and overall quality grade. Results showed that (1) the first 3 months of culture seem crucial for pearl quality surface determination and (2) all the genes (SHEM5, PRISM, ASP, SHEM9) encoding proteins related to calcite layer formation were over-expressed in the pearl sacs that produced low pearl surface quality. Multivariate regression tree building clearly identified three genes implicated in pearl surface quality, SHEM9, ASP and PIF. SHEM9 and ASP were clearly implicated in low pearl quality, whereas PIF was implicated in high quality. Results could be used as biomarkers for genetic improvement of P. margaritifera pearl quality and constitute a novel perspective to understanding the molecular mechanism of pearl formation.  相似文献   

18.
Many species of the butterfly genus Phengaris are regarded as endangered in many parts of their distribution. Several species are also widely distributed across northern China. Due to land use change and overgrazing, their habitats are declining and many patches have been lost. This paper investigates the distribution and habitats of the Chinese Phengaris species (of the subgenus Maculinea). Shrub-grassland near forests seem the most frequent habitat for Phengaris, while flat open grasslands are mostly over-grazed and thus survival for Phengaris butterflies there seems difficult. Throughout Europe, P. teleius is an endangered species, while there is still no information on its status in China. To improve the knowledge on the population ecology of P. teleius, its population structure, adult behaviour and movement were studied through mark–release–recapture methods in the Qinling Mountains of Taibai County. Eight grassland patches which were potentially suitable were found in the area in 2013. In total, 480 individuals (274 females) were marked, resulting in an overall recapture rate of 16 %. The average daily population size was 44 butterflies (±23 SD) during the adult flight period. Sixty-seven percent of the females and 38 % of the males moved less than 50 m, and 17 % of recaptured females and 38 % of males moved more than 200 m. The mean movement distance was 107 ± 177 m for males and 182 ± 122 m for females. The majority of the recaptures (86 %) were made within the patches, only a few individuals (14 %) moved between patches. Due to human disturbance and destruction, all of the eight potentially suitable patches are becoming smaller and increasingly isolated, thus these populations of P. teleius may face an increasing risk of extinction, which may well be a tip of the iceberg of habitat loss and fragmentation of P. teleius in Taibai County and possibly beyond. Hence we hope our initial study of P. teleius could have positive impacts on the conservation of Phengaris butterflies in China.  相似文献   

19.
We provide a definition of the unit internal (physiological) time based on metabolism. If q(t) is specific rate of metabolism, i.e. the amount of energy (oxygen) consumed by unit of active mass per physical time unit, the unit of physiological time τ(t) is defined as physical time, during which unit of active mass consumes one unit of energy: τ(t) = 1/q(t). The dimension of unit physiological time is the same as that of unit physical time and its value depends on q(t). Therefore, the unit physiological time τ(t) is a variable value, while the internal time is unequal relative to the physical time. The more internal time units τ, i.e., elementary acts of energy consumption, fit in the unit physical time t, the longer is the unit physical time for the unit active mass relative to the internal time unit, i.e., the physical time is seemingly slowed down. And, on the contrary, the less elementary acts of energy consumption take place during unit physical time, the shorter seems unit t, i.e. physical time is seemingly accelerated. Unequal course of the internal time is determined by the curve of specific metabolism q(t) during the life under specific conditions and, hence, internal time is individual. It has been questioned that the total (during lifetime) specific metabolism, often called Rubner constant, can serve as specie specific characteristic.  相似文献   

20.
Kin recognition has been demonstrated by plant biomass allocation and morphology traits as well as by nitrogen (N) uptake, but has not been examined from a nutrient-niche view yet. In this study, four species with distinct lifestyles, including Glycine max (L.) Merr. (herbaceous legume), Belamcanda chinensis (L.) DC. (herbaceous non-legume), Caesalpinia pulcherrima (L.) Sw. (woody legume), and Populus tomentosa (L.) Carr. (woody non-legume) were used to demonstrate kin recognition by estimating their biomass and allocation, as well as nutrient niches based on their uptake efficiency for N, phosphorus (P), sulfur (S), potassium (K), calcium (Ca), magnesium (Mg), and iron (Fe). For G. max, kin recognition was achieved by increased biomass, and by reduced nutrient-uptake efficiency of N, P, S, K, Ca, Mg, and Fe (decreased nutrient niches) to decrease nutrient competition among kin plants compared to the strangers. Although B. chinensis and C. pulcherrima had no biomass response, kin plants of B. chinensis increased, whereas C. pulcherrima decreased their S-uptake efficiency compare to strangers. Therefore, kin competition occurred in B. chinensis through increased nutrient niche whereas kin recognition occurred in C. pulcherrima through decreased nutrient niche. By comparison, P. tomentosa showed the co-occurrence of kin recognition and competition by increased root allocation and decreased P-uptake efficiency. These findings suggest that the biomass allocation and plant nutrient niches based on their nutrient-uptake efficiency can be used as potential parameters to identify kin recognition.  相似文献   

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