The genetic conditions in heterozygous and homozygous populations of Drosophila. II. X-ray induced lethals in a homozygous and a heterozygous population

Strains of Drosophila melanogaster were made isogenic for their second chromosomes by means of the marker strain LCy/Pm. One of these strains was used as a founder for a homozygous experimental population (W). All other strains were mixed and established a heterozygous population (LKW). Both populations were free of lethals in the beginning with respect to their second chromosomes. After they had been exposed to an X-ray irradiation of 7000 r they contained about 26 per cent newly induced lethal chromosomes. Whereas in the heterozygous population the lethal frequency decreased rather fast to 10 per cent, that of the homozygous population remained rather constant at 25 per cent during a period of 135 days. After a year of continuation, however, both populations reached the same lethal frequency of about 10 per cent. Allelism tests carried out after 10 generations revealed that there was a highly heterotic lethal factor in the homozygous population. After excluding this heterotic lethal from the calculations, the lethal frequencies of the two populations remained significantly different. It was assumed that the relative mean fitness of lethal heterozygotes was generally higher in the homo-than in the heterozygous populations. The results indicate that homozygous populations are much more capable of incorporation new mutations than heterozygous.     

CONTINUING STUDIES ON THE SOUTH AMHERST DROSOPHILA MELANOGASTER NATURAL POPULATION DURING THE 1970'S AND 1980'S

Continuing investigations on the South Amherst Drosophila melanogaster natural population following the significant decline and recovery of lethal (le) and semilethal (sle) frequencies in the late 1960's (Ives, 1970) show that the population has been remarkably stable although it contains MR (male recombination) and/or P DNA elements (Kidwell et al., 1977a; Green, 1980). A 13-year study affirms that the lethals present are nonrandomly distributed along the second chromosome and deficient on the right; they differ significantly in distribution from spontaneous (Ives, 1973) and δ-induced lethals (Minamori and Ito, 1971). Between 1970 and 1977, a total of 4,083 second chromosomes from the Markert subpopulation were analyzed; 28.9% of the chromosomes were lethal and 7.25% were semilethal in homozygous condition. Frequencies are similar for early summer and late fall collections although the rate of allelism among lethals is significantly higher in early summer than in late fall. For the large fall (1970–1979) Porch site population, 2,519 second chromosomes were analyzed; 29.5% were lethal and 8.0% were sublethal as homozygotes; the rate of allelism among lethals was 1.50%. At Hockanum, 1977–1983, lethal and semilethal frequencies were lower; the rate of allelism among lethals was 1.43%. The chromosome map distribution of lethals does not change between summer and late fall at Markert. The overall distributions of lethals at the Markert and Hockanum sites are similar. In tests for male recombination (MR) activity in the population over a 6-year period, a total of 0.47% recombinants were observed; these were uniformly distributed along the second chromosome. Comparisons are made with other long studied D. melanogaster populations.     

Clan Lethals and Inter-Year Allelism in Death Valley DROSOPHILA PSEUDOOBSCURA

A chromosome 2 lethal allelism rate of about 3% was found in the 1974 population of D. pseudoobscura in Death Valley, California. This rate was significantly higher than allelism rates in other Southern California populations. The Death Valley population was sampled again in 1975 and 1977, with allelism rates of 1% and 0.5%, respectively. In 1974, several lethals were in high frequencies (about 1%), a pattern that reappeared in 1975 and 1977. However, none of the lethals in high frequency one year were in high frequency another year; the particular lethal alleles present in this ephemeral population appear to be due to their random presence in the flies which refound the population every winter. The results for the Death Valley population are compared with a Japanese population of D. melanogaster in which lethals in high frequency one year are also in high frequency in succeeding years and with earlier work on chromosome 3 of D. pseudoobscura, which showed a lower lethal frequency and higher allelism rate.     

Genetic variation in a semi-natural Drosophila population after a bottleneck I. Lethals,their allelism and effective population size

A semi-natural Drosophila melanogaster population was twice forced through a genetic bottleneck and allowed to recover naturally. In one case additional variation was introduced to the recovering population. The percentage of lethal chromosomes, the level of allelism between these lethals, and the effective population size calculated from the allelism of these lethals all rose sharply in the few generations following each bottleneck, though this was not the case in the very first generation. Thereafter this rise decelerated rapidly and never returned to pre-bottleneck levels. Additional introduced variation had little effect. The reasons for and implications of this pattern have been considered.     

Gene Flow in Natural Populations of DROSOPHILA MELANOGASTER with Special Reference to Lethal Allelism Rates and Protein Variation

A simultaneous survey of 14 protein loci, together with frequencies and within- and between-population allelism rates of lethal chromosomes, was carried out in five (four Japanese and one Korean) natural populations and one cage population of Drosophila melanogaster. It was found that lethal allelism rates decrease rapidly as geographic distance between two populations increases, while variation at protein loci shows a remarkable similarity over all populations examined. These findings suggest that there are very high levels of gene flow in these natural populations and that selection at protein loci which can maintain substantial geographic variation, if present, is overshadowed by gene flow. There is no indication that invasion of D. melanogaster to the Far East occurred so recently that the frequencies of lethal chromosomes are still in nonequilibrium.     

Genetic load and viability studies in Korean natural populations of Drosophila melanogaster

Further studies about the amount of genetic load in the Korean Anyang and Cheju (Sughipo) Island populations of Drosophila melanogaster were performed. In total 1630 second chromosomes were extracted from the Anyang opulation between 1983 and 1985; 19.0 % of the chromosomes proved lethal, 8.8 % semilethal in homozygous condition. From the island oulation, 504 wild second chromosomes were analysed in 1986; 24.2 % were lethal, 4.6 % subleiaf A slight increase of lethal and semilethal frequencies between 1976 and 1986 can be observed. Mean viabilities of “all homozy-gotes”, “quasinormal-homozygotes”, and “random heterozygotes” were estimated from crossin experiments with marker strains. Random heterozygotes were always more viable than quasinormal homozygotes. An analysis for correlation between random heterozgous and homozygous viabilities gave values significantly different from zero only for the 1985 kyang sample (r =—0.4625, P < 0.01), but no significances could be observed for all other Anyang samples from 1983, 1984, and 1986, respectively. he effective population sizes were estimated to be between 2000 and 6300 individuals for the Anyan and 4200 individuals for the island population, using Nel's formula (1968). It is sugested that baknced natural selection is mainly responsible for the maintenance of genetic load in the Anyang natural populations of D. melanogaster.     

Heterozygous effects on viability of Drosophila supergenes that are lethal when homozygous

Eight fourth chromosomes which were homozygous lethal and 170 which were homozygous nonlethal were extracted from the same Drosophila melanogaster cage. The lethals were complementary, i.e., they were viable in all 28 nonreflexive pairwise combinations. Three different lethals produced sterile homozygotes; these are called leaky lethals. Different lethal heterozygotes' viabilities were compared by means of paired-t tests. The difference in mean relative viabilities between a pair of genotypes containing different lethals but exactly the same nonlethal was treated as one observation. The mean difference for any pair of lethals was based on only part of the full array of nonlethals. Of 17 possible paired comparisons, nine were statistically significant. In eight out of ten possible pairs and in six out of seven significant pairs, the heterozygous viability of leaky lethals was less than that of absolute (nonleaky) lethals. There was no association between stage of homozygous lethal action and heterozygous viability effect. In general, different lethals had different heterozygous effects on viability. The results are summarized in Table 5. In memoriam David Walter Kenyon (1939–1972)Research supported by The National Science Foundation of the United States (GB-3759).     

The Frequency and Allelism of Lethal Chromosomes in Isolated Desert Populations of DROSOPHILA PSEUDOOBSCURA

Second-chromosome lethals were extracted from four populations of Drosophila pseudoobscura in Southern California. Two of the populations were from desert oases and two from the classic habitat on Mt. San Jacinto, previously studied by Dobzhansky. Allelism tests were made on the lethals within and between all locations. The frequency of lethal second-chromosomes in each location was 0.18, and this was not different from the results of other workers for samples throughout the species range. Interpopulational allelism rates were about 0.005, and not different from earlier results of Dobzhansky. Intrapopulational rates in this study were, with one exception, the same as the interpopulational rates, and significantly lower than Dobzhansky found using the third chromosome. This may be due to lethals being linked with heterotic third-chromosome inversions. The allelism rate of the exceptional population (about 0.03 and equal to Dobzhansky''s intrapopulational results) may be due to heterotic lethals, or a founder effect. Two lethals were found in three populations each, possibly due to migration among these populations, which are up to 334 km apart.     

Genetic load and coadaptation of chromosomal inversions. II. O-chromosomes in Drosophila subobscura populations

We have analysed the inversion polymorphism and genetic load of O-chromosomes in three populations of D. subobscura from southeastern Europe. As expected for a central populations the inversion polymorphism was extensive. In a like fashion, the genetic load, in particular the frequency of lethals, was heavy in all three populations. There were significant differences in the frequency of moderately deleterious genes. These differences in viability can be attributed to balancing selection. A comparison of these two kinds of genetic polymorphism indicates that there are differences in mean viability among different gene arrangements of O-chromosomes in the three populations. The differences observed are due to an unequal distribution of various viability classes among O-chromosome gene arrangements. We here show for the first time a specific distribution of lethal genes among these arrangements within the Palearctic distribution area of D. subobscura. The lethal allelism test showed lethals are non-randomly associated with the Ost gene arrangement. The amount of genetic load is heavy in gene arrangements with a high frequency, in comparison with the ones with a low frequency. Lethal genes may be protected in combinations of low and moderate frequency gene arrangements that harbor more lethal genes, as the Ost in the one population. Some arrangements that are less protected against recombination have a higher load than ones that are more protected against recombination. This can be taken as evidence for coadaptation.     

Tracking the origin of the American colonization by Drosophila subobscura: genetic comparison between Eastern and Western Mediterranean populations

Several pieces of evidence indicate a Mediterranean origin of the colonization of America by Drosophila subobscura . To ascertain whether the origin was from the Eastern or the Western Mediterranean region, samples from Barcelona (Spain) and Mt Parnes (Greece) were collected and O chromosomal inversion polymorphism and lethal genes were analysed. The frequencies of lethal chromosomes were 0.244 ± 0.039 in Barcelona and 0.336 ± 0.043 in Mt Parnes, consistent with the expectations for large populations located in the central area of the species distribution. Lethal genes seem to be distributed at random along the O chromosome in both populations. The intra-populational allelism frequencies of Barcelona and Mt Parnes were 0.016 ± 0.007 and 0.012 ± 0.005 respectively. Thus, the estimates of the effective population size were high in both populations (between 6964 and 13 004 in Barcelona and 11 874 to 26 828 in Mt Parnes). The cases of allelism in Mt Parnes were observed only between individual lethal genes, but in Barcelona some concatenated clusters of allelism were detected. This pattern of allelism can be explained by synthetic lethality, hybrid dysgenesis, the induction of recurrent lethal mutations by different factors or an effect of microdifferentiation in subpopulations. In both populations, a reduction in fitness in the heterozygotes for lethal genes has been detected. Furthermore, the estimates of the migration coefficient (between 0.0085 and 0.0120 in Barcelona, and 0.0057 and 0.0087 in Mt Parnes) confirm the existence of gene flow between Palearctic populations of D. subobscura . Our lethal genes and chromosomal inversion results are consistent with a Mediterranean origin of the colonization of America by D. subobscura , but are inconclusive with regard to the identification of the population from which these colonizers came.     

Accumulation of lethals in highly selected lines of Drosophila melanogaster

Summary Four synthetic lines of D. melanogaster selected for low sternopleural bristle number for 50 generations were screened for lethals on chromosome III when their mean score equalled 2.5. Each line originated from a cross between line M (previously selected for the same trait during 130 generations) and a different unselected cage population. Line M was already known to carry a recessive lethal on chromosome III affecting the selected trait, such that the bristle score of the lethal heterozygote was lower than that of the viable homozygote. Tests revealed 18 lethals, 15 of these present in at least two lines. Each line carried from 10 to 16 lethals. All lines carried groups of lethals present on the same chromosome, and at least six lethals in each line were included in such an association with a frequency of 0.18 or higher. It appears that the lethal affecting bristle score in line M has protected a segment of chromosome III from natural selection and that the remaining 14 lethals have accumulated later in that line.     

The Genetic Structure of Natural Populations of DROSOPHILA MELANOGASTER. Xvii. a Population Carrying Genetic Variability Explicable by the Classical Hypothesis

About 400 second chromosomes were extracted from the Aomori population, a northernmost population of D. melanogaster on Honshu in Japan, and the following experimental results were obtained. (1) The frequency of lethal chromosomes was 0.23. (2) The effective size of the population was estimated to be about 3000, from the allelism rate of lethal chromosomes and their frequency. (3) The detrimental and lethal loads for viability were 0.243 and 0.242, respectively, and the D/L ratio became 1.00. (4) The average degree of dominance for mildly deleterious genes was estimated to be 0.178 ± 0.056. (5) Additive (σ²_A) and dominance (σ²_D) variances of viability were estimated to be 0.00276 ± 0.00090 and 0.00011 ± 0.00014, respectively. (6) There was no significant difference in environmental variances between homozygotes and heterozygotes. Using these estimates, we discuss the maintenance mechanisms of genetic variability of viability in the population. The mutation-selection balance explained these experimental results.     

The genetic structure of Balkan populations of Drosophila subobscura

Although Drosophila subobscura has been a model organism for European and American population geneticists, little information is available on the genetic structure of its natural populations. In this paper we report the estimates of some population parameters. We have used data from lethal allelism tests in four Balkan populations (Kamariste, Djerdap and Petnica in Serbia and Zanjic in Montenegro). In all populations, lethal genes were found to have a deleterious effect on heterozygotes. The N(e) values varied greatly from 370 (Petnica) to 19413 (Kamariste), depending on the habitat conditions and some environmental factors. Finally, gene flow between the Balkan populations was detected by the estimates of N(m) (from 4.68 in Petnica to 106.2 in Kamariste) and m (from 0.0041 in Djerdap to 0.0126 in Petnica). These results agree with those obtained in a previous study where the frequencies of allelism between populations were greater than predicted by independently arising lethal genes.     

Viabilities of originally natural O-chromosomal inversion homo- and heterokaryotypes in Drosophila subobscura

The influence of epistatic interactions of lethal and non-lethal genes upon viability of Drosophila inversion karyotypes is poorly known. In this paper we present comparative results for viabilities of 21 originally natural O-inversion homo- and 38 heterokaryotypes in a D. subobscura population. We observed strong heterotic effect in viability of O-lethal heterozygotes irrespective of different inversion backgrounds, which indicates a mechanism for protection of a great number of lethal genes. In O-non-lethal heterozygotes the heterotic effect in viability was absent irrespective of different inversion backgrounds. Our results showed a great extent of genetic load and high abundance of O-chromosomal arrangements in the population analyzed. It belongs to the set of central European populations. An epistasis of lethal genes present in O-inversion hetero- and not present in O-inversion homokaryotypes of moderate or low frequencies could be good example for co-adaptation of chromosomal inversions with regard to the genetic load. This represents a more efficient mechanism for limitation of genetic load than alternative mechanisms for protection of lethals. Except for lethal genes, possible epistatic interactions of mildly deleterious (subvital) genes, could also be responsible for limiting the extent of genetic load in natural D. subobscura populations. We demonstrated a non-random distribution of several combinations of viability classes among different O-inversion homo- and heterokaryotypes. As a consequence of that, the viabilities of the O-inversion homokaryotypes compared to heterokaryotypes were significantly higher at low frequencies than in moderate or high frequencies. This shows frequency-dependence as a mechanism of balancing selection for protection of O-chromosomal inversions in natural D. subobscura populations. In addition, the viabilities of the O-inversion homokaryotypes of lower frequency, compared to homokaryotypes of moderate or high frequency, were significantly higher. This again indicates the existence of supergene selection as another mechanism for protection of chromosomal inversions, as co-adapted complexes in natural D. subobscura populations.     

Allelic Negative Complementation at the Abruptex Locus of DROSOPHILA MELANOGASTER

The mutations of the Abruptex locus in Drosophila melanogaster fall into three categories. There are recessive lethal alleles and viable alleles. The latter can be divided into suppressors and nonsuppressors of Notch mutations. The recessive lethals are lethal in heterozygous combination with Notch. As a rule the recessive lethals are lethal also in heterozygous combination with the viable alleles. Heterozygous combinations of certain viable alleles are also lethal. In such heterozygotes, one heteroallele is a suppressor of Notch and the other is a nonsuppressor. Other heterozygous combinations of viable alleles are viable and have an Abruptex phenotype. The insertion of the wild allele of the Abruptex locus as an extra dose (carried by a duplication) into the chromosomal complement of the fly fully restores the viability of the otherwise lethal heterozygotes if two viable alleles are involved. The extra wild allele also restores the viability of heterozygotes in which a lethal and a suppressor allele are present. If, however, a lethal and a nonsuppressor are involved, the wild allele only partly restores the viability, and the effect of the wild allele is weakest if two lethal alleles are involved. It seems likely that of the viable alleles the suppressors of Notch are hypermorphic and the nonsuppressors are hypomorphic. The lethal alleles share properties of both types, and are possibly antimorphic mutations. It is suggested that the locus is responsible for a single function which, however, consists of two components. The hypermorphic mutations are defects of the one component and the hypomorphic mutations of the other. In heterozygotes their cumulative action leads to decreased viability. The lethal alleles are supposed to be defects of the function as a whole. The function controlled by the locus might be a regulative function.     

The Genetic Structure of Natural Populations of DROSOPHILA MELANOGASTER. Xi. Genetic Variability in a Local Population

Six hundred and ninety-one second chromosomes were extracted from a Raleigh, North Carolina population, and the following experimental results were obtained: (1) Salivary gland chromosomes of all lines were observed and the number of inversion-carrying chromosomes was 130, among which 76 carried In(2R)NS, 36 carried In(2L)t, 4 carried In(2L)t and In(2R)NS, and 14 carried different kinds of rare inversions. (2) Viabilities of homozygotes and heterozygotes were examined. The frequency of lethal-carrying chromosomes was 275/691 (or 0.398):70/130 (or 0.538) in inversion-carrying chromosomes and 205/561 (or 0.365) in inversion-free chromosomes. The former is significantly higher than the latter. The average homozygote viability was 0.4342 including lethal lines and 0.7163 excluding those, the average heterozygote viability being 1.0000. The detrimental load to lethal load ratio (D:L ratio) was 0.334/0.501 = 0.67. The average viability of lethal heterozygotes was less than that of lethal-free heterozygotes, significantly in inversion-free individuals but not significantly so in inversion-carrying individuals. Inversion heterozygotes seem to have slightly better viability than the inversion-free heterozygotes on the average, but not significantly so. (3) The average degree of dominance of viability polygenes was estimated to be 0.293 +/- 0.071 for all heterozygotes whose component chromosomes had better viabilities than 0.6 of the average heterozygote viability, 0.177 +/- 0.077 for inversion-free heterozygotes and 0.489 +/- 0.082 for inversion heterozygotes. (4) Mutation rates of viability polygenes and lethal genes were estimated on the basis of genetic loads and average degrees of dominance of lethal genes and viability polygenes. Estimates were very close to those obtained by direct estimation. (5) Possible overdominance and epistasis were detected, but the magnitude must be very small. (6) The effective size of the population was estimated to be much greater than 10,000 by using the allelism rate of lethal-carrying chromosomes (0.0040) and their frequency.-On the basis of these findings and the comparison with the predicted result (Mukai and Maruyama 1971), the mechanisms of the maintenance of genetic variability in the population are discussed.     

Determination of the probable ontogenic time of action of lethal factors on thesecond chromosome of Drosophila melanogaster derived from a natural population

From the study of the genetic load of second chromosome factors in a natural population of Drosophila melanogaster, 15 lethal-bearing strains were recovered and maintained in the laboratory balanced against Ins (2L+2R), Cy, L⁴. For each lethal factor, the probable time of action during development was determined by the appearance of a sharp reduction, at any given stage, in the frequency of individuals compared to that expected in the absence of the lethal factor. Carried out in this way, the analysis suggested that sevne were embryonic lethals, two larval lethals and three pupal lethals. Additionally, three gave no evidence of affecting any of the above-mentioned stages; these are interpreted as gametic lethals.     

Wild O chromosomes of Drosophila subobscura from different geographic regions have different effects on viability

By means of the marker strain Va/Ba wild chromosomes O of Drosophila subobscura were extracted from eight natural populations situated on a north-south gradient from Sweden or Scotland to Tunesia. Lethal frequencies and viability effects of the wild chromosomes O were studied in homozygous and random heterozygous combinations. In accordance with results from other Drosophila species random heterozygotes were always more viable than homozygotes. The viability-determining polygene system proved, however, dominant to some degree. Geographic differences became apparent especially with respect to three different characteristics: (1) The lethal frequencies for chromosomes O from central populations are higher than for those from northern and southern marginal populations; (2) Mean viabilities of non-lethal homozygotes and random heterozygotes are lower for central than for marginal populations; (3) The increase of viability through heterozygosity is more pronounced in the northern populations than in the others. The differences are thought to be mainly due to differences in the adaptation strategy of marginal and central populations. The viability fitness components seem of more importance for the marginal populations while fertility components may be of greater weight under central conditions. The geographic variability of the viability polygene system is finally compared with that of other genetic traits in D. subobscura.     

Hypomorphic lethal mutations and their implications for the interpretation of lethal complementation studies in Drosophila

In a small region of the X chromosome of Drosophila melanogaster, we have found that a third of the mutations that appear to act as lethals in segmental haploids are viable in homozygous mutant individuals. These viable mutations fall into four complementation groups. The most reasonable explanation of these mutations is that they are a subset of functionally hypomorphic alleles of essential genes: hypomorphic mutations with activity levels above a threshold required for survival, but below twice that level, should behave in this manner. We refer to these mutations as "haplo-specific lethal mutations." In studies of autosomal lethals, haplo-specific lethal mutations can be included in lethal complementation tests without being identified as such. Accidental inclusion of disguised haplo-specific lethals in autosomal complementation tests will generate spurious examples of interallelic complementation.     

The distribution of lethal allelism in finite populations

It is shown that, under certain conditions, the distribution of lethal allelism in equilibrium populations is independent of the fitness of heterozygotes. For these conditions, an expression for the over-generation variance of allelism is given.