松辽盆地上白垩统嫩江组一段介形类生物地层研究

在对杏104井,杏1—丁3—检323井和塔3井等3口优选井的介形类化石鉴定的基础上,通过对3口优选井涉及研究层位的87块介形类化石样品进行统计分析和编制介形类主要种的地层分布延限图、开展介形类生物地层学研究,建立松辽盆地晚白垩世嫩江组一段介形类化石带7个,包括新建介形类化石带1个,修订介形类化石带1个,并详细描述这7个介形类化石带。     

Complex controls on ostracod palaeoecology in a shallow coastal brackish‐water lake: implications for palaeosalinity reconstruction

1. The low‐Mg calcite shells of Ostracoda (Crustacea) are often well preserved in the sediments of alkaline lakes. In coastal waters that have undergone large temporal changes in salinity, ostracod assemblages preserved in the sediment record have been used to reconstruct palaeosalinity, often assuming that salinity is the only significant control on the faunas. 2. We evaluate the performance of ostracods as palaeosalinity indicators in Hickling Broad, a shallow brackish coastal lake in Norfolk, U.K., by comparing fossil ostracod assemblages covering two centuries with geochemical inferences and instrumental records of past salinity and water composition along with other palaeolimnological indicators. 3. Despite large changes in the salinity of the lake and the supposed salinity sensitivity of ostracods, the fossil ostracod assemblages do not clearly reflect the salinity trends inferred from the other independent data. Rather, a complex series of changes has occurred in the lake over the past 200 years and factors other than salinity, including eutrophication, toxicity and associated complex alterations in habitat availability have probably influenced ostracod assemblages. In contrast, there is a good broad agreement between inferred or measured salinity and the trace‐element chemistry of ostracod shells. 4. We conclude that ostracod faunas may not always provide unambiguous palaeosalinity records and should therefore not be used to reconstruct salinity changes except as part of a multi‐proxy investigation that includes other palaeoecological and/or geochemical indicators.     

Comparing predatory drillholes to taphonomic damage from simulated wave action on a modern gastropod

Marine drilling predation, in which the predator bores a hole through shelled invertebrate prey, plays a role in the structure of benthic communities. As drilling often leaves the prey shell otherwise undamaged, the resulting holes are also an excellent proxy for drilling predation pressure in the fossil record. Considering that a large number of predation studies focus on drilling predation in the fossil record, it is crucial that we are able to distinguish true drilling predation from taphonomy. The purpose of this study is to determine damage on Olivella biplicata shells, drilled by naticid gastropods, is distinguishable from taphonomically produced damage to these shells. In addition, the potential for preferential breakage due to either the presence or whether absence of a drillhole was investigated. Drilled and non-drilled O. biplicata shells were tumbled to simulate wave action and were checked at intervals to record accumulated damage. Drilled and non-drilled shells do not show a significant difference in damage accumulated while undergoing simulated wave action. Taphonomic damage is unlikely to be mistaken for drilling damage, due to the jagged, irregular appearance of taphonomically produced holes.     

Preface: The phylogeny, fossil record and ecological diversity of ostracod crustaceans

After more than two centuries of research, more than 65,000 living and fossil ostracod species have been described and studied, yet much remains to be learned about this ancient, widespread and diverse group of bivalved arthropods. Their higher classification and phylogeny are subjects of vigorous debate, as is their position in the broader picture of crustacean phylogeny. At the same time, major advances in our understanding of ostracod lineages and their relationships are resulting from the application of innovative approaches and techniques. This preface provides a contextual overview of the 15 contributions to this volume, which resulted from the 14th International Symposium on Ostracoda (ISO2001) held in 2001at Shizuoka, Japan. As such it provides a cross-section of topics at the forefront of research on the evolution and diversity of Ostracoda, and indicates directions for future work.     

Magnesium and strontium in non-marine ostracod shells as indicators of palaeosalinity and palaeotemperature

Measurements of the Ca, Sr, and Mg contents of individual calcitic shells of non-marine ostracods and their host waters, both in lakes and controlled aquaria, permit the calculation of the distribution coefficients of Sr/Ca and Mg/Ca partitioning in ostracod shells. We report new K_D[Sr] for seven genera of non-marine ostracods and K_D[Mg] for Cyprideis at 25°C.Strontium partitioning is virtually temperature-independent, and is related to the Sr/Ca of the host water, and in Ca²⁺-saturated waters, to the salinity of the water. Magnesium partitioning is dependent on both temperature and Mg/Ca of the host water.For simple closed-basin lakes (crater lakes are ideal), the Sr content of ostracods is a sensitive indicator of salinity and thus evaporation/precipitation changes, which in turn, indicate variations in continental climate. A 10000-year continuous palaeosalinity record established by Sr and Mg contents of fossil ostracods for Lake Keilambete, southeastern Australia, is in close agreement with an independent palaeosalinity estimate based on sediment textures.We suggest rules that allow Sr and Mg analyses of suites of individual fossil ostracod shells from lacustrine sediments to be interpreted in terms of palaeosalinity and palaeotemperature variations.     

Evaporation effects as reflected in freshwaters and ostracod calcite from modern environments in Central and Northeast Yakutia (East Siberia,Russia)

Taxonomical and geochemical investigations on freshwater ostracods from 15 waters in Central and Northeast (NE) Yakutia have been undertaken in order to estimate their potential usefulness in palaeoenvironmental reconstructions based on regional fossil records. Higher variability in environmental factors such as pH, electrical conductivity, and ionic content was observed in thermokarst-affected lakes in Central Yakutia than in NE Yakutia lakes. Species diversity of freshwater ostracods reached up to eight taxa per lake, mostly dominated by Candona weltneri Hartwig 1899, in Central Yakutia, whereas in NE Yakutian waters the diversity was lower and Candona muelleri jakutica Pietrzeniuk 1977 or Fabaeformiscandona inaequivalvis (Sars 1898) had highest frequencies. Coupled analyses of stable isotopes (δ¹⁸O, δ¹³C) and element ratios (Sr/Ca, Mg/Ca) were performed on both host waters and ostracod calcite, aiming to estimate the modern relationships. Correlations between host waters and ostracod calcite of single species were found for δ¹⁸O, δ¹³C and Sr/Ca and Mg/Ca ratios. The relationships between δ¹⁸O, Mg/Ca and Sr/Ca ratios and electrical conductivity (salinity) as an expression of solute concentrations in the waters mainly controlled by evaporation are more complicated but evident, and may be useful in future interpretation of geochemical data from fossil Siberian ostracods. Handling editor: K. Martens     

Brood care in a Silurian ostracod

An exceptionally preserved new ostracod crustacean from the Silurian of Herefordshire, England, preserves eggs and possible juveniles within its carapace, providing an unequivocal and unique view of parental brood care in the invertebrate fossil record. The female fossil is assigned to a new family and superfamily of myodocopids based on its soft-part anatomy. It demonstrates a remarkably conserved egg-brooding reproductive strategy within these ostracods over 425 Myr. The soft-tissue anatomy urges extreme caution in classifying 'straight-hinged' Palaeozoic ostracods based on the carapace alone and fundamentally questions the nature of the shell-based Palaeozoic ostracod record.     

The ‘Oxycythereis’ problem: taxonomy and palaeobiogeography of deep‐sea ostracod genera Pennyella and Rugocythereis

Systematic revision of the globally distributed deep‐sea ostracod genera Pennyella Neale, 1974 and Rugocythereis Dingle, Lord and Boomer, 1990, which have been considered to correspond, at least partially, to nomen nudum but widely used genus name ‘Oxycythereis,’ was conducted to reduce taxonomic uncertainty of these important components of the Modern and fossil deep‐sea ostracod community. Approximately 100 specimens from 18 species were examined, ranging in age from the Cretaceous to the present day. Nine new species are described: Pennyella rexi, Pennyella sanfordae, Pennyella liowae, Pennyella schellenbergi, Pennyella majorani, Pennyella iani, Pennyella ayressi, Rugocythereis melonis and Rugocythereis zarikiani. Emended generic concepts of Pennyella and Rugocythereis are proposed, and the palaeobiogeographical distributions of these two genera are discussed.     

Freshwater ostracod assemblages and their relationship to environmental variables in waters from northeast Germany

An ecological calibration dataset for freshwater ostracods from 33 localities throughout West-Pomerania (Mecklenburg-Vorpommern, Germany) was evaluated using multivariate statistical methods. A total of 47 freshwater ostracod species were identified. Nine species were rediscovered after 100 years since the last published record and Candonopsis scourfieldi and Pseudocandona sucki was recorded for the first time in the study area. Special emphasis is put on the phenology of each species to gain information on the water characteristics at the time of their last moult. Canonical correspondence analysis (CCA) revealed that the ecological variables such as water temperature, Ca, Mg, and lake area were statistically most significant (p < 0.005; n = 72) in explaining variation in the distribution of ostracod assemblages. In addition, a transfer function was developed for paleolimnological approaches, based on a weighted-averaging (WA) model to calculate water temperature from the relative abundances of 22 selected ostracod species. This model was successfully applied to infer lake water temperature from subfossil ostracod assemblages collected from lacustrine deposits in northeast Germany (Lake Krakower See). Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

Tonnacypris glacialis (Ostracoda, Cyprididae): taxonomic position, (palaeo-) ecology, and zoogeography

Abstract. The freshwater ostracod Tonnacypris glacialis (Sars, 1890) is reported from the European Pleistocene for the first time. The historical allocation of the species is discussed, and the species composition and characteristics of Tonnacypris Diebel & Pietrzeniuk (1975) and its phylozoogeography are considered. The significance of T. glacialis is reviewed, particularly from the viewpoint of the possible implications of parthenogenesis (and occasional-male production) for the Quaternary history of the genus, and for the use of the species in palaeoenvironmental reconstruction. It is suggested that the Pleistocene fossil occurrence of T. glacialis in modern temperature latitudes is a robust indicator of mean summer temperatures of 6°C.     

Distribution of Cyprideis torosa (Ostracoda) in Quaternary Athalassic Sediments in Germany and its Application for Palaeoecological Reconstructions

Cyprideis torosa (Jones , 1850) is a very common brackish water ostracod of the German coasts, but, despite empty valves are found occasionally in surface sediments of some modern inland waters, C. torosa could not be found living in modern athalassic waters of Germany so far. During interglacial periods, including the Holocene, however, fossils of this species are quite common in Central Germany, at a distance of more than 300 km away from the coasts of the Baltic and North Seas. All 31 Quaternary localities with C. torosa known so far from Germany are documented. C. torosa is an indicator for brackish waters and widely used as index‐fossil in palaeosalinity reconstructions relying on water chemistry bound morphological changes (nodes, sieve‐pores). The comparisons imply a general underestimation of palaeosalinity in oligo‐ to mesohaline athalassic waters if using nodes and sieve‐pores of C. torosa as proxy. A water chemistry (ionic composition) driven morphological response is assumed instead one by salinity only. Palaeosalinity estimations for athalassic waters, relying on morphological variability alone, should therefore be used with caution. Palaeosalinity trends, however, can be detected. Distinguishing thalassic and athalassic sediments with C. torosa is possible by using the associated ostracod fauna as a discriminator. Regarding the ecology and distribution of C. torosa, permanent, brackish, and shallow water bodies under relatively warm conditions are required for its settlement. The source of the salt are brines originating from Zechsteinian or Triassic underground evaporites. Warm and relatively dry climates could enhance the process for such water bodies of becoming salty, a situation present in Holocene Central Germany. The occurrence of C. torosa can therefore be used for palaeoclimatological studies. The most probable migration path of this ostracod species to athalassic waters is by avian transport. (© 2012 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Early to mid-Pleistocene ostracod δO and δC in the central Tibetan Plateau: Implication for Indian monsoon change

As one of the pioneering projects of the Chinese Environmental Scientific Drilling (CESD) Program, a 206.5 m long sediment core (CE) was retrieved from Co Ngoin (Co = lake) Basin in the central Tibetan Plateau. Limnic records of the abundance of ostracod shells and their oxygen and carbon isotope measurements, together with the geochemical and the sedimentological investigations, were carried out on the interval between 143 and 52 m core depths, corresponding to ca. 2.01–0.84 Myr. Distinct oscillations of the abundance and the chemical compositions of ostracod shells have yielded the original information about variations in lakewater chemistry in association with the change in the Indian monsoon over the period of 2.01 to 0.84 Myr. The climate conditions during the Early Pleistocene were characterized by frequent oscillations and the ostracod records had expressed its synchronous response to these oscillations. A major climate change occurred in the Co Ngoin area at about 0.93 Myr. A pronounced fluctuation in ostracod δ¹⁸O and δ¹³C during the Mid-Pleistocene transition (MPT) is possibly associated with an increase in continental ice sheets. The compositional and the sedimentological characters of the immediately overlying sediments imply a shallow aquatic environment and also a harsh (salinity?) condition beyond the tolerance limits for ostracod survival, resulting in the disappearance of the Qinghaicypris crassa Huang 1979 around 0.84 Myr.     

A novel archaeal DNA repair factor that acts with the UvrABC system to repair mitomycin C‐induced DNA damage in a PCNA‐dependent manner

The sliding clamp proliferating cell nuclear antigen (PCNA) plays a vital role in a number of DNA repair pathways in eukaryotes and archaea by acting as a stable platform onto which other essential protein factors assemble. Many of these proteins interact with PCNA via a short peptide sequence known as a PIP (PCNA interacting protein) motif. Here we describe the identification and functional analysis of a novel PCNA interacting protein NreA that is conserved in the archaea and that has a PIP motif at its C‐terminus. Using the genetically tractable euryarchaeon Haloferax volcanii as a model system, we show that the NreA protein is not required for cell viability but that loss of NreA (or replacement of the wild‐type protein with a truncated version lacking the C‐terminal PIP motif) results in an increased sensitivity to the DNA damaging agent mitomycin C (MMC) that correlates with delayed repair of MMC‐induced chromosomal DNA damage monitored by pulsed‐field gel electrophoresis. Genetic epistasis analysis in Hfx. volcanii suggests that NreA works together with the UvrABC proteins in repairing DNA damage resulting from exposure to MMC. The wide distribution of NreA family members implies an important role for the protein in DNA damage repair in all archaeal lineages.     

DNA damage induces nuclear translocation of parkin

Parkinson's disease (PD) is the second most common form of human degenerative disorder. Mutation of parkin is one of the most prevalent causes of autosomal recessive PD. Parkin is an E3 ubiquitin ligase that acts on a variety of substrates, resulting in polyubiquitination and degradation by the proteasome or monoubiquitination and regulation of biological activity. However, the cellular functions of parkin that relate to its pathological involvement in PD are not well understood. Here I show that parkin translocates into nucleus upon DNA damage. Nuclear translocation of parkin appears to be required to promote DNA repair. These findings suggest that DNA damage induces nuclear translocation of parkin leading to the PCNA interaction and possibly other nuclear proteins involved in DNA repair. These results suggest that parkin promotes DNA repair and protects against genotoxicity, and implicate DNA damage as a potential pathogenic mechanism in parkinsonism.     

Land use and ostracod community structure

Ostracods are important members of the benthos and littoral communities of lake ecosystems. Ostracods respond to hydrochemistry (water chemistry) which is influenced by climatic factors such as water balance, temperature, and chemicals in rainfall runoff from the land. Thus, at local scales, environmental preferences of ostracods and characteristics of lakes are used to infer changes in climate, hydrology, and erosion of lake catchments. This study addresses potential drivers of ostracod community structure and biodiversity at multiple spatial scales using NMS, CART^?, and multiple regression models. We identified 23 ostracod species from 12 lake sites. Lake area, maximum depth, spring conductivity, chlorophyll a, pH, dissolved oxygen, sedimentary carbonate, and organic matter all influence ostracod community structure based on our NMS. Based on regression analysis, lake depth, chlorophyll a, and total dissolved solids best explained ostracod richness and abundance. Land uses are also important community structuring elements that varied with scale; locally and regionally agriculture, wetlands, and grasslands were important. Nationally, using regression tree analysis of lakes sites in the North American Non-marine ostracod database (NANODe), row-crop agriculture was the most important predictor of biodiversity. Low agriculture corresponded to low species richness but greater landscape heterogeneity produced sites of high ostracod richness.     

Effects of desiccation on the toxicant sensitivity of rotifers

Non-native aquatic macrophytes have invaded different types of ecosystems all over the world. The exotic submersed macrophyte Hydrilla verticillata recently invaded the Paraná basin, Brazil, being recorded by the first time in the natural habitats of this river in 2005. We investigated the effects of this species on ostracod assemblages and compared the abundance, richness, and Shannon–Wiener diversity of ostracod assemblages that colonize the invading species with those that colonize Egeria najas, a native submersed species with similar architecture and physical complexity. Fragments of these two species were left for 28 days in tanks to root and grow and then they were transferred to a floodplain lake where they remained in pairs (one plant of each species; N = 7) during 30 days for colonization by ostracods. A detrented correspondence analysis was used to summarize ostracod assemblage composition. Although there were no significant differences in ostracod abundance, richness and Shannon diversity when analyzed separately, cumulative curves, which permit to eliminate effects of abundance on richness, indicated a significantly higher number of ostracod species on H. verticillata. Assemblage composition was significantly different between both plant species, as shown by the first DCA axis. Our results show that H. verticillata might provide favorable habitats for native ostracod assemblages.     

Late Glacial and Holocene Ostracoda of the Gulf of Gdańsk,the Baltic Sea,Poland

To trace environmental changes in water hydrology and salinity in the Late Glacial to Holocene of the Gulf of Gdańsk, a south‐eastern bay of the Baltic Sea within the maritime zone of Poland, the distribution of ostracod valves was studied in 20 sediment cores collected from both the shallow‐ and deep‐water zones (depth 10.9–67.5 m). The studied sediment sequences yielded ca. 3000 valves of 21 ostracod species, of which only five are known to live today in the Gulf, which has a present maximum depth of 118 m and water salinity up to 7–8‰. The majority of the studied sediment layers that contained ostracod valves corresponded to the period of the Late Glacial to Mid‐Holocene and was dominated by non‐marine species, of which the most common were Candona neglecta (present in 17 cores), Cytherissa lacustris (15 cores) and Candona candida (14 cores). By clustering classification five major ostracod assemblage types were recognised in the studied cores. Initial assemblage types dominated mostly by inhabitants of the profundal/sub‐littoral zones of modern oligo‐mesotrophic lakes (C. lacustris and C. neglecta) in some sediment sequences were replaced in stratigraphical order by the assemblages dominated by brackish‐water species (Cyprideis torosa or Cytheromorpha fuscata). The structure and species composition of the distinguished ostracod assemblage types as well as their successional transitions indicate that the studied sediments were deposited initially in the Late Glacial in freshwater lacustrine conditions, and subsequently, during the Holocene marine transgression, covered by marine sands. The present results confirm and consolidate inferences based on previously published data on ostracods from the western part of the Gulf of Gdańsk as well as on other biotic (molluscs, diatoms) and abiotic (seismoacoustic) indices from this area (© 2012 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Morphology and affinities of Eridostracina: Palaeozoic ostracods with moult retention

Ostracods are by far the most abundant living group of arthropods in the fossil record. Traditionally, eridostracines were classified as members of the Class Ostracoda. They have also been considered to represent extinct marine spinicaudatan (conchostracan) branchiopods. The ostracod affinity of the Eridostracina is evident in a number of features such as the muscle scars pattern, the hinge structure, the presence of an adductorial sulcus reflected as a ridge on the internal surface and the separation at the dorsal margin of successive valves. The eridostracines might be a polyphyletic group, containing aberrant representatives of ostracods, with ancestors probably among the conchoprimitid, leperditellid and beyrichioidean ostracod species. The Eridostracina represent an extinct group of small marine crustaceans with a multilayer structure of the calcified carapace, formed through the retention of unshed moults during the growth process. Details of the morphology of the eridostracine Cryptophyllus socialis from the Upper Devonian of Russia are reconstructed using the process of exfoliation of successive exuviae. ‘Double-sided’ hingement structures were found in the accumulated exuviae. It is suggested that the main function of these structures was the strengthening of the connection between the accumulated valves. The hingement of Cryptophyllus represents a vestigial structure, which has lost its original function as a pivot, a role documented in the ancestors of that genus. Tubular structures were found attached to the internal side of the calcite layer. It is suggested that they also represent vestigial pore canals, having lost their original function as sensory receptors. External surfaces of the attached exuviae bear imprints of the tubular structures of the overlying exuviae. These imprints originated probably due to the strong pressure of the new cuticle against the old one, during the very short moulting time. During this process, the freshly formed cuticle was at its final size, but still soft and non-calcified. A number of three-dimensionally preserved cell-like structures were recovered inside the interlayer chambers.     

Base excision repair capacity in chronic renal failure patients undergoing hemodialysis treatment

The aim of this study was to determine if the differences observed in the levels of DNA damage in a group of patients suffering from chronic renal failure are due to differences in the repair capability. DNA damage was initially measured with the comet assay in 106 hemodialysis patients. A selected group of 21 patients representing high (ten patients) and low (11 patients) levels of DNA damage were obtained for determination of base excision repair capacity. This was measured in an in vitro assay where protein extracts from lymphocytes were incubated with a substrate of DNA containing 8‐oxoguanine, and the rate of incision was measured with the comet assay. Patients with high levels of genomic damage showed, as an average, significantly lower repair capacity (12·73 ± 1·84) in comparison with patients with low levels of genomic damage (18·13 ± 1·13). Nevertheless, the correlation coefficient between repair ability and levels of genomic damage was found to be only close to the significance value (r:?0·423, p: 0·056). Although DNA damage was clearly related to time on hemodialysis, base excision repair capacity was not. This is one of the few studies providing information on the repair capacity of chronic renal failure patients undergoing hemodialysis. As a summary, our results would indicate that DNA damage levels are in part associated to the repair capacity of the patients, and this repair capacity is not associated with the duration of hemodialysis treatment. Copyright © 2013 John Wiley & Sons, Ltd.