An immunohistochemical analysis of SERT in the blood–brain barrier of the male rat brain

5-Hydroxytryptamine (5-HT) was originally discovered as a vasoconstrictor. 5-HT lowers blood pressure when administered peripherally to both normotensive and hypertensive male rats. Because the serotonin transporter (SERT) can function bidirectionally, we must consider whether 5-HT can be transported from the bloodstream to the central nervous system (CNS) in facilitating the fall in blood pressure. The blood–brain barrier (BBB) is a highly selective barrier that restricts movement of substances from the bloodstream to the CNS and vice versa, but the rat BBB has not been investigated in terms of SERT expression. This requires us to determine whether the BBB of the rat, the species in which we first observed a fall in blood pressure to infused 5-HT, expresses SERT. We hypothesized that SERT is present in the BBB of the male rat. To test this hypothesis, over 500 blood vessels were sampled from coronal slices of six male rat brains. Immunofluorescence of these coronal slices was used to determine whether SERT and RecA-1 (an endothelial cell marker) colocalized to the BBB. Blood vessels were considered to be capillaries if they were between 1.5 and 23 µm (intraluminal diameter). SERT was identified in the largest pial vessels of the BBB (mean ± SEM = 228.70 ± 18.71 µm, N = 9) and the smallest capillaries (mean ± SEM = 2.75 ± 0.12 µm, N = 369). SERT was not identified in the endothelium of blood vessels ranging from 20 to 135 µm (N = 45). The expression of SERT in the rat BBB means that 5-HT entry into the CNS must be considered a potential mechanism when investigating 5-HT-induced fall in blood pressure.     

Three-channel Lissajous′ trajectories of auditory event-related potentials to target stimuli

Three orthogonal recordings (‘X’, ‘Y’ and ‘Z’) of event-related potentials (ERPs) evoked by auditory target stimuli were represented in 3-dimensional voltage-space, to produce 3-channel Lissajous′ trajectories (3-CLTs). Stimuli were verbal or non-verbal and were differentiated by their pitch, phonemic or phonetic attributes. Visual inspection and quantitative evaluations unexpectedly revealed that the 3-CLT of these ERPs strongly resembles a ‘hair-pin’ trajectory. This trajectory tilted in space at characteristic angles with each of the analysis axes: 133° with the ‘X’ axis, 87° with the ‘Y’ axis, and 54° with the ‘Z’ axis. The relatively small inter-subject variability observed in the geometrical measures, particularly in orientation, may be attributed to the slight variation in the underlying generators. 3-CLT analysis could be useful in future clinical as well as source studies of ERP generators.     

Association analysis of GABAA β2 and γ2 gene polymorphisms with event-related prefrontal activity in man

Gamma-aminobutyric acid (GABA)A-receptors play a crucial role in the generation of electroencephalogram (EEG) oscillations and evoked potentials (ERPs). The present association study was designed to test whether EEG and ERPs are modulated by genetic variations of the human GABAA beta2 (GABRB2) and gamma2 (GABRG2) genes on chromosome 5q33. The genotypes of two nucleotide substitution polymorphisms of the GABRB2 and GABRG2 genes were assessed in 95 psychiatrically healthy subjects of German descent. Neurophysiological phenotyping was performed with four factorized EEG/ERP parameters: EEG activation, anterior and posterior EEG synchronization, and event-related activity (N100/ P200-complex). No genotypic association was found for the GABRB2 nucleotide exchange polymorphism with any electrophysiological parameter. A significant association was found between the genotype of the intronic GABRG2 G-->A nucleotide exchange and the event-related N100/P200 (ANOVA: F=3.81; df=2; P=0.026). A comparison of homozygous subjects carrying either the G/G or A/A genotype of the GABRG2 polymorphism consistently revealed an even stronger difference in the effect-size (ANOVA: F=11.13; df=1; P=0.002). Post hoc analysis of this association with current density analysis in three-dimensional neuroanatomic Talairach space-time showed a reduction in the event-related signal power after 120 ms in the right dorsolateral prefrontal cortex. Taking into account the risk of false-positive association findings attributable to multiple testing, our results encourage further replication studies to examine the phenotype-genotype relationship of GABRG2 gene variants and event-related prefrontal activity.     

Fluorescence quenching in model membranes An analysis of the local phospholipid environments of diphenylhexatriene and gramicidin A′

Interactions between the fluorophors diphenylhexatriene or gramicidin A′ and lipids are examined using a spin-labeled phosphatidylcholine as a fluorescence quenching probe. It is found that in phospholipid vesicles of mixed lipid composition at temperatures where phospholipids are completely in the liquid crystal phase, several different species of phosphatidylcholines are randomly distributed around the fluorophors. In vesicles of mixed lipid composition which can undergo thermally induced phase separations, the fluorescence quenching observed at lower temperatures reflects a non-random distribution of lipids around each fluorophor. This observation is explained in terms of the partition of fluorophor between a spin-labeled lipid-rich liquid crystal phase, and a spin-labeled lipiddepleted gel phase. Gramicidin A′ strongly favors partition into the liquid crystal phase, whereas diphenylhexatriene partitions about equally between the two lipid phases. A method is described utilizing fluorescence quenching for the calculation of the partition coefficient for a fluorophor. The partition coefficients so calculated are shown to be in good agreement with previously reported values derived from other methods. It is also shown that Ca²⁺-induced lipid phase separations can be monitored by fluorescence quenching.     

Can ambient odors influence the recognition of emotional words? A behavioral and event-related potentials study

Odor context can affect the recognition of facial expressions. However, there is no evidence to date that odor can regulate the processing of emotional words conveyed by visual words. An emotional word recognition task was combined with event-related potential technology. Briefly, 49 adults were randomly divided into three odor contexts (pleasant odor, unpleasant odor, and no odor) to judge the valence of emotional words (positive, negative, and neutral). Both behavioral and Electroencephalography (EEG) data were collected. Both the pleasant odor and unpleasant odor contexts shortened the response time of the subjects to emotional words. In addition, negative words induced greater amplitudes of early posterior negativity (EPN) and late positive potential (LPP) than the positive and neutral words. However, the neutral words induced a larger N400 amplitude than the positive and negative words. More importantly, the processing of emotional words was found to be modulated by external odor contexts. For example, during the earlier (P2) processing stages, pleasant and unpleasant odor contexts induced greater P2 amplitudes than the no odor context. In the unpleasant odor context, negative words with the same odor valence induced greater P2 amplitudes than the positive words. During the later (N400) stages, various regions of the brain regions exhibited different results. For example, in the left and right frontal areas of the brain, exposure to positive words in a pleasant odor context resulted in a smaller N400 amplitude than exposure to neutral words in the same context. Meanwhile, in the left and right central regions, emotional words with the same valence as pleasant or unpleasant odor contexts elicited the minimum N400 amplitude. Individuals are very sensitive to emotional information. With deeper processing, different cognitive processes are reflected and they can be modulated by external odors. In the early and late stages of word processing, both pleasant and unpleasant odor contexts exhibited an undifferentiated dominance effect and could specifically modulate affectively congruent words.     

Solubilization and some properties of γ-glutamyltransferase from human brain microvessels

Detergents Triton X-100, sodium deoxycholate, and octyl--D-glucopyranoside, and proteinase papain proved to be excellent agents solubilizing the -glutamyl-transferase (-GT) from human brain cortex microvessels. Ficin also solubilized -GT but to a lesser extent than papain. The relative molecular mass of the detergent-solubilized enzyme form was greater than 200,000 (in the presence of Triton X-100). The relative molecular mass of the proteinase-solubilized form was slightly greater than that of albumine. -GTs of microvessels from five human brain regions and from the choroid plexus were tested for their specificity toward acceptors. The best acceptors were found to be (in decreasing order of activity)l-cystine, glycylglycine,l-glutamine,l-methionine, andl-alanine. The findings suggest that the main features of -GT of the human blood-brain barrier are very similar to those of -GTs from other human tissues.     

Isolation, properties and spatial site analysis of γ subunits of B-phycoerythrin and R-phycoerythrin

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Nitrous oxide and methane exchange in two small temperate forest catchments—effects of hydrological gradients and implications for global warming potentials of forest soils

The magnitude of greenhouse gas (GHG) flux rates may be important in wet and intermediate wet forest soils, but published estimates are scarce. We studied the surface exchange of methane (CH₄) and nitrous oxide (N₂O) from soil along toposequences in two temperate deciduous forest catchments: Strødam and Vestskoven. The soil water regime ranged from fully saturated to aerated within the catchments. At Strødam the largest mean flux rates of N₂O (15 μg N₂O-N m^?2 h^?1) were measured at volumetric soil water contents (SWC) between 40 and 60% and associated with low soil pH compared to smaller mean flux rates of 0-5 μg N₂O-N m^?2 h^?1 for drier (SWC < 40%) and wet conditions (SWC > 80%). At Vestskoven the same response of N₂O to soil water content was observed. Average CH₄ flux rates were highly variable along the toposequences (?17 to 536 μg CH₄-C m^?2 h^?1) but emissions were only observed above soil water content of 45%. Scaled flux rates of both GHGs to catchment level resulted in emission of 322 and 211 kg CO₂-equivalents ha^?1 year^?1 for Strødam and Vestskoven, respectively, with N₂O contributing the most at both sites. Although the wet and intermediate wet forest soils occupied less than half the catchment area at both sites, the global warming potential (GWP) derived from N₂O and CH₄ was more than doubled when accounting for these wet areas in the catchments. The results stress the importance of wet soils in assessments of forest soil global warming potentials, as even small proportions of wet soils contributes substantially to the emissions of N₂O and CH₄.     

Biochemical characterization of recombinant β-glucosyltransferase and analysis of global 5-hydroxymethylcytosine in unique genomes

5-Hydroxymethylcytosine (5-hmC) is an enzymatic oxidative product of 5-methylcytosine (5-mC). The Ten Eleven Translocation (TET) family of enzymes catalyze the conversion of 5-mC to 5-hmC. Phage-encoded glucosyltransferases are known to glucosylate 5-hmC, which can be utilized to detect and analyze the 5-hmC as an epigenetic mark in the mammalian epigenome. Here we have performed a detailed biochemical characterization and steady-state kinetic parameter analysis of T4 phage β-glucosyltransferase (β-GT). Recombinant β-GT glucosylates 5-hmC DNA in a nonprocessive manner, and binding to either 5-hmC DNA or uridine diphosphoglucose (UDP-glucose) substrates is random, with both binary complexes being catalytically competent. Product inhibition studies with β-GT demonstrated that UDP is a competitive inhibitor with respect to UDP-glucose and a mixed inhibitor with respect to 5-hmC DNA. Similarly, the glucosylated-5-hmC (5-ghmC) DNA is a competitive inhibitor with respect to 5-hmC DNA and mixed inhibitor with respect to UDP-glucose. 5-hmC DNA binds ~10 fold stronger to the β-GT enzyme when compared to its glucosylated product. The numbers of 5-hmC on target sequences influenced the turnover numbers for recombinant β-GT. Furthermore, we have utilized recombinant β-GT to estimate global 5-hmC content in a variety of genomic DNAs. Most of the genomic DNAs derived from vertebrate tissue and cell lines contained 5-hmC. DNA from mouse, human, and bovine brains displayed 0.5-0.9% of the total nucleotides as 5-hmC, which was higher compared to the levels found in other tissues. A comparison between cancer and healthy tissue genomes suggested a lower percentage of 5-hmC in cancer, which may reflect the global hypomethylation of 5-mC observed during oncogenesis.     

Finite element analysis of acetabular fractures—development and validation with a synthetic pelvis

Acetabular fracture presents a challenging situation to trauma surgeons today due to its complexity. Finite element (FE) models can be of great help as they can improve the surgical planning and post surgery patient management for those with acetabular fractures. We have developed a non-linear finite element model of the pelvis and validated its fracture prediction capability with synthetic polyurethane pelves. A mechanical experiment was performed with the synthetic bones and fracture loads and patterns were observed for two different loading cases. Fracture loads predicted by our FE model were within one standard deviation of the experimental fracture loads for both loading cases. The incipient fracture pattern predicted by the model also resembled the actual pattern from the experiment. Although it is not a complete validation with human cadaver bones, the good agreement between model predictions and experimental results indicate the validity of our approach in using non-linear FE formulation along with contact conditions in predicting bone fractures.     

Separation and properties of a “Neutral” hexosaminidase from embryonic chicken brain

• 1.1. A “neutral” hexosaminidase has been separated from other hexosaminidase forms (I and II) by DEAE-cellulose chromatography and characterized in embryonic (16-days old) and 1-day old chicken brains.
• 2.2. Its properties differ from those of the forms I and II. It has optimum activity at about pH 6.0 and can be eluted from DEAE-cellulose with 0.25 M KCl only.
• 3.3. It has no N-acetylgalactosaminidase activity and cannot be successfully detected after isoelectric focusing since it is very acidic and completely unstable below pH 5.0.
• 4.4. “Neutral” hexosaminidase is heat-stable at pH 6.0 and is inhibited by chloride.
• 5.5. These properties, very different from those of forms I and II, suggest that this “neutral” form of hexosaminidase would be very similar to known hexosaminidase C separated from other materials.
• 6.6. We have found no significant differences for the above-mentioned three forms in chick embryos (16-days old) in comparison with those from 1-day old chicken.

     

Carbon acquisition and water relations of lichens in polar regions — potentials and limitations

Primary production in lichens, as in all plants, is the result of gains and losses. Losses of carbon may be high under extreme environmental conditions. In the harsh climate of polar regions lichens use much carbon for maintenance and in their stress response. Thallus biomass is preserved through periods of darkness, extremely low temperatures and snow cover. On the other hand, lichens are photosynthetically active at temperatures below 0°C. They can make use of melted water from snow and ice and take up water vapour from snow. Physiological adaptations and environmental conditions under which growth is possible are discussed in terms of our recent results. A concept model describes the main parameters that influence carbon acquisition, growth and water relations of lichens in polar regions.     

Processing and Analyzing Affymetrix SNP Chips with Bioconductor

We briefly review some principles of the Bioconductor project for statistical analysis of genome scale data and show in detail how these are deployed to analyze high-density genotyping arrays manufactured by Affymetrix, Inc. (Genome-wide SNP 6.0). Issues addressed include probe design and verification of probe address assertions, preprocessing of scanned intensities via SNPRMA, genotype calling via CRLMM, and downstream analysis of genotype-expression associations.     

Characterisation and properties of the inclusion complex of 24-epibrassinolide with β-cyclodextrin

This paper reports the first study of an inclusion complex of abrassinosteroid with -cyclodextrin. The formation of inclusion complexesbetween 24-epibrassinolide and -cyclodextrin was confirmed by theirphysicochemical properties and the compounds were analysed by differentialscanning calorimetry, powder X-ray diffraction, nuclear magnetic resonancespectrometry and scanning electron microscopy. Theoretical calculations usingthe MM+ HyperChem force field showed a preference for inclusion of thesidechain of the epibrassinolide molecule into the -cyclodextrin cavity toform a 1:1 inclusion complex, although complexes involving inclusion ofthe steroidal nucleus also possess a favourable interaction energy. Rice laminainclination assay, employing IAC-103 and IAC-104 cultivars, showed an improvedactivity for the epibrassinolide-cyclodextrin complex compared to theepibrassinolide itself. The results suggest that brassinosteroid complexationwith cyclodextrins may enhance the biological activity of these plant growthregulators.     

The interaction of D-galactonic acid with CrVI and CrIII. Structure,stability and physical properties of CrIII—aldonate complexes

The redox reaction between D-galactonic acid and potassium chromate yields ((lyxonateH₋₁)(galactonateH₋₁)Cr(OH₂))K·H₂O_n, with both aldonate molecules acting as bidentate ligands with the carboxylate and one alkoxo function as the donor sites. The shift of the CO₂^{poststaggered−} stretching vibration towards lower frequencies upon coordination and the high value of Δv indicate that the carboxylate acts as a monodentate donor site. Magnetic susceptibility data for the compound in the temperature range 3–300 K exhibit a drop in the effective magnetic moment with temperature below 70 K, which is indicative of antiferromagnetic interactions between the Cr^III centres. The molar magnetic susceptibility versus temperature plot could be fitted with the Fisher Hamiltonian for the case of infinite chains, equation-modified for the presence of monomeric species. The EPR and UV-Vis spectroscopic studies reveal that, in solution, the complex retains the distorted octahedral local coordination geometry. The ((lyxonateH₋₁)(galactonateH₋₁)Cr(OH₂))K_n dissociates slowly in aqueous solution but faster at high [H⁺], because of the rapid protonation of the alkoxo bridges linking the monomeric units. The potentiometric evaluation of the closely related binary system Cr^III-d-galactonate shows that the (Cr(galactonateH_−n)₂)^{1 − 2n} complexes are the major species in the 4–12 pH range, when a 1:2 Cr^III:ligand ratio is used. ¹³C NMR reveals that theCO₂^{poststaggered−} group is one of the coordination sites of the ligand.     

CEA-containing immune complexes in sera of patients with colorectal and breast cancer — analysis of complexed immunoglobulin classes

Summary A sandwich enzyme immunoassay was developed to detect circulating immune complexes containing carcinoembryonic antigen (CEA) and immunoglobulin (Ig) G, IgA, or IgM using a nitrocellulose-bound anti-CEA antibody as the solid phase reagent. Elevated levels of CEA-containing circulating immune complexes (CEA-IC) were found in 15.4% of 117 sera from patients with colorectal cancer in a postsurgery follow-up study. Also in 24.5% of 102 sera from patients with breast cancer in different states of disease CEA-IC were found. The predominant Ig determined in CEA-IC of colorectal cancer patients was IgA, followed by IgG and IgM, whereas IgG and IgM were the most frequent Igs in CEA-IC of breast cancer patients. Elevated CEA levels were found in 12.0% of the colorectal cancer patients and in 25.4% of sera from breast cancer patients. No significance for the coincidence of elevated CEA levels and CEA-IC was recorded in all patients sera tested. In sera of patients with disease recurrence, however, both parameters were shown to be elevated (CEA 80.7% and CEA-IC 42.3%). The data presented indicate the detection of CEA-IC as an additional parameter for the identification of patients at increased risk for disease recurrence.