Nature of the effect of ther locus on the lipid content of embryos of peas (Pisum sativum L.)

The aim of this work was to discover why pea (Pisum sativum L.) embryos recessive at the r locus (rr) have a higher lipid content than embryos dominant at this locus (RR). The r locus is a gene encoding starch-branching enzyme, rr embryos have a much lower activity of this enzyme than RR embryos, and hence a reduced rate of starch synthesis. The higher lipid content of rr embryos must be a consequence of this. We suggest that neither differences in the availability of substrate for lipid synthesis as a consequence of different rates of starch synthesis, nor differences in the capacity of the pathway for malonyl-CoA synthesis, account for the different lipid contents of RR and rr embryos. Lipid contents of the two sorts of embryo first diverge at a much later stage in development than divergence in starch content. Amounts of pyruvate and acetate, and activities of enzymes that convert triose phosphate to malonyl CoA are the same in the two sorts of embryo. Most of the lipid in developing embryos is polar, structural lipid, and polar lipid accounts for a large proportion of the difference in lipid content between the two sorts of embryo. This difference in structural-lipid content reflects considerable structural differences between the two sorts of embryo and is presumably the consequence of differences in rates of lipid turnover.Abbreviations DW dry weight - FW fresh weight - FAME fatty-acid methyl esters This work was supported by a grant-in-aid from the Agricultural and Food Research Council to the John Innes Institute. We are very grateful to Alan Jones for his valuable advice on lipid analysis and to Dr. Kay Denyer (Advanced Technologies, Cambridge, UK) for valuable discussions. We thank Dr. Cliff Hedley for the gift of the seed of the peas used in this work.     

Confidence Intervals of the Attributable Risk under Cross‐Sectional Sampling with Confounders

Since it can account for both the strength of the association between exposure to a risk factor and the underlying disease of interest and the prevalence of the risk factor, the attributable risk (AR) is probably the most commonly used epidemiologic measure for public health administrators to locate important risk factors. This paper discusses interval estimation of the AR in the presence of confounders under cross‐sectional sampling. This paper considers four asymptotic interval estimators which are direct generalizations of those originally proposed for the case of no confounders, and employs Monte Carlo simulation to evaluate the finite‐sample performance of these estimators in a variety of situations. This paper finds that interval estimators using Wald's test statistic and a quadratic equation suggested here can consistently perform reasonably well with respect to the coverage probability in all the situations considered here. This paper notes that the interval estimator using the logarithmic transformation, that is previously found to consistently perform well for the case of no confounders, may have the coverage probability less than the desired confidence level when the underlying common prevalence rate ratio (RR) across strata between the exposure and the non‐exposure is large (≥4). This paper further notes that the interval estimator using the logit transformation is inappropriate for use when the underlying common RR ≐ 1. On the other hand, when the underlying common RR is large (≥4), this interval estimator is probably preferable to all the other three estimators. When the sample size is large (≥400) and the RR ≥ 2 in the situations considered here, this paper finds that all the four interval estimators developed here are essentially equivalent with respect to both the coverage probability and the average length.     

Resistance to acaricides in Italian strains of <Emphasis Type="Italic">Tetranychus urticae</Emphasis>: toxicological and enzymatic assays

Problems with Tetranychus urticae are frequently reported in protected crops in Italy, particularly in roses where many introduced acaricides show a progressive loss of effectiveness. We have conducted bioassays to assess the response of some Italian strains of T. urticae to a number of acaricides. These include compounds that were widespread and frequently used in the past, but also some recently registered compounds. We investigated two T. urticae strains collected from rose growers where control failures were reported (SAN and PSE), together with a strain collected from unsprayed vegetables (BOSA). Adult females of the rose strains (SAN and PSE) were resistant to tebufenpyrad (Resistant Ratio—RR, RR₅₀ = 48.4 and 163.6) and fenpyroximate (RR₅₀ = 74.1 and 25.9) when compared to the susceptible BOSA strain. Lethal concentrations for these products were higher than the registered field rate. The PSE strain proved to be highly resistant to abamectin (RR₅₀ = 1,294.1). Variation in bifenazate susceptibility was detected amongst strains, but LC₉₀ values of SAN and PSE were still in the range of the registered field rate. In egg bioassays, the SAN and PSE strains exhibited high resistance levels to clofentezine (RR₅₀ = 66,473 and 170,714), hexythiazox (RR₅₀ = 70,244 and 159,493) and flufenoxuron (RR₅₀ = 61.9 and 117.9). But the recently introduced ovi/larvicides etoxazole and spirodiclofen exhibited high activity on all strains. The activity of detoxifying enzymes such as esterases, glutathione-S-transferases (GSTs) and cytochrome P450 monooxygenases (MFOs) was determined in these strains as a preliminary attempt to identify potential resistance mechanisms. Enzymatic assays showed that the rose strains exhibited 2.66 and 1.95-fold increased MFOs activity compared to the susceptible strain. Assays for GSTs revealed that only the SAN strain exhibited a significantly higher activity. In contrast, only the PSE strain showed a significant higher hydrolysis of 1-naphthyl acetate.     

Meta-analysis of the interaction between shade-tolerance,light environment and growth response of woody species to elevated CO2

Growth responses of different tree species to elevated CO₂ vary enormously, even when grown under the same basic experimental conditions (such as nutrient supply and light conditions). A test of the hypothesis that this variation is associated with the species’ shade-tolerance is presented. A meta-analysis of 74 logarithm-transformed response ratios RR (total biomass in ∼700 μmol·mol^–1 CO₂/biomass in current ambient CO₂), grouped according to the species’ relative tolerance to shade, revealed that RR differed widely and significantly between seedlings or saplings of woody species of different shade-tolerance. Only comparative studies were included in the meta-analysis, and interference from differences in basic experimental conditions between experiments was minimised. The mean RR of species with very high shade-tolerance was 1.51. This was significantly greater than the value of 1.18 for species intolerant of shade. Smaller differences in mean RR were found between groups of species that differed less widely in shade-tolerance. When responses were categorised according to two aspects of light environment in the experiments, daily integrated or peak photosynthetically active photon flux density (PFD), the differences in RR between different shade-tolerance classes disappeared at daily integrated PFD below ∼20 mol·m^–2·d^–1 or peak PFD below ∼250 μmol·m^–2·s^–1. Growth stimulation in juvenile trees is likely to cause increased survivorship in subsequent years. Even if the observed differences in RR were restricted to sites experiencing no or only moderate shading, it appears likely that they will affect species composition of naturally regenerating forests in the long term.     

Insecticide resistance,associated mechanisms and fitness aspects in two Brazilian Stegomyia aegypti (= Aedes aegypti) populations

In Brazil, insecticide resistance in Stegomyia aegypti (= Aedes aegypti) (Diptera: Culicidae) populations to pyrethroids and to the organophosphate (OP) temephos is disseminated. Currently, insect growth regulators (IGRs) and the OP malathion are employed against larvae and adults, respectively. Bioassays with mosquitoes from two northeast municipalities, Crato and Aracaju, revealed, in both populations, susceptibility to IGRs and malathion (RR₉₅ ≤ 2.0), confirming the effectiveness of these compounds. By contrast, temephos and deltamethrin (pyrethroid) resistance levels were high (RR₉₅ > 10), which is consistent with the use of intense chemical control. In Crato, RR₉₅ values were > 50 for both compounds. Knock‐down‐resistant (kdr) mutants in the voltage‐gated sodium channel, the pyrethroid target site, were found in 43 and 32%, respectively, of Aracaju and Crato mosquitoes. Biochemical assays revealed higher metabolic resistance activity (esterases, mixed function oxidases and glutathione‐S‐transferases) at Aracaju. With respect to fitness aspects, mating effectiveness was equivalently impaired in both populations, but Aracaju mosquitoes showed more damaging effects in terms of longer larval development, decreased bloodmeal acceptance, reduced engorgement and lower numbers of eggs laid per female. Compared with mosquitoes in Crato, Aracaju mosquitoes exhibited lower OP and pyrethroid RR₉₅, increased activity of detoxifying enzymes and greater effect on fitness. The potential relationship between insecticide resistance mechanisms and mosquito viability is discussed.     

Synthesis of thiazol-2-imines from the reduction of single enantiomer 2-imino-thiazolidin-4-ones followed by a spontaneous water elimination

Chiral hemiaminals ( 5-8RR and 5-8SS ) have been synthesized from the corresponding 2-iminothiazolidine-4-ones ( 1-4RR and 1-4SS ) by LiAlH₄ reductions stereoselectively and were then converted to single enantiomer thiazol-2-imines ( 9-12RR and 9-12SS ) by a water elimination reaction. The kinetics of the dehydration reactions which occurred spontaneously both in the solid state and in the solution have been followed by time dependent ¹H nuclear magnetic resonance spectroscopy. The corresponding first order rate constants and free energies of activation values for the conversions have been reported.     

INTERACTION BETWEEN GENOTYPES AT THE DIAZINON-RESISTANCE LOCUS OF THE AUSTRALIAN SHEEP BLOWFLY,LUCILIA CUPRINA. FACILITATION OF DEVELOPMENT OF SUSCEPTIBLE GENOTYPES

The survival of larvae with susceptible (+ +) genotypes at the diazinon-resistance locus of the Australian sheep blowfly, Lucilia cuprina is facilitated by prior conditioning of diazinon-containing media by heterozygote (R+) or resistant (RR) larvae. The effect is not observed on media without diazinon. Conditioning by + + genotypes does not affect subsequent development of susceptible larvae and the viability of R + and RR larvae is unaffected by conditioning of the media. Similar results are observed when the medium is conditioned with crushed larvae of the three genotypes. The development of + + larvae is enhanced only on media containing diazinon to which R + or RR crushed larvae are added. The results for other comparisons are equivalent for conditioned or unconditioned media. The number of crushed ++, R +, or RR larvae added to the medium containing diazinon does not affect the proportion of + + eggs that develop through larval and pupal stages to emerge as adults. The rate of development of the + + genotype is, however, positively correlated with the number of crushed R + or RR larvae added.     

Identification of N‐octylnortadalafil and its Stereoisomers in Dietary Supplements with Chiral Liquid Chromatography–Circular Dichroism

A direct chiral liquid chromatography–circular dichroism (LC‐CD) method was developed for the simple and rapid identification of N‐octylnortadalafil [(6R, 12aR)‐6‐(1,3‐benzodioxol‐5‐yl)‐2‐octyl‐2,3,6,7,12,12a‐hexahydropyrazino[1’,2’:1,6]pyrido[3,4‐b]indole‐1,4‐dione; RR‐OTDF] and its stereoisomers in dietary supplements. Samples were extracted with methanol. Compounds were then separated by chiral LC‐CD using Chiralcel OD‐RH (4.6 × 1 50 mm, 5 µm) with 5 mM ammonium formate (pH 3)/0.1% formic acid in acetonitrile (95:5, v/v) mixture solution (mobile phase A) and 0.1% formic acid in acetonitrile (mobile phase B). The isocratic elution used was mobile phase A / mobile phase B (3:7, v/v) at a flow rate of 1 ml/min. The column temperature was held at 30°C. RR‐OTDF and its stereoisomers were separated within 20 min with the resolution factors being over 2.0. Using this method, RR‐OTDF and (6R, 12aS)‐6‐(1,3‐benzodioxol‐5‐yl)‐2‐octyl‐2,3,6,7,12,12a‐hexahydropyrazino[1’,2’:1,6]pyrido[3,4‐b]indole‐1,4‐dione were detected in a dietary supplement. Chirality 28:204–208, 2016. © 2016 Wiley Periodicals, Inc.     

Influence of the annual flood-pulse on catch per unit effort,condition and reproduction of Clarias gariepinus from the upper Okavango Delta,Botswana

Catch per unit effort (CPUE), length, weight and maturity data for Clarias gariepinus were collected during monthly gillnet surveys in the upper Okavango Delta between 2001 and 2009 to investigate their relationship with the annual flood-pulse. CPUE, condition factor (K) and the proportion of ripe-running fish (P_RR) in the population followed a unimodal annual cycle that could be modelled using water temperature and flood-pulse hydrology. Increased CPUE during declining water levels was most likely a result of feeding migrations and aggregation behaviour. The observed increase in K during low floods in October and November preceded the increase in P_RR, which increased mainly with increasing temperature but appeared less dependent on flow. This study provided quantitative evidence that the biology of fish in the Okavango Delta is mainly dependent on the annual flood regime and, therefore, that conservation efforts should be focused on maintaining natural flow patterns in the face of climate change and potential water extraction schemes upstream.     

<Emphasis Type="Italic">Slc11a1</Emphasis> (<Emphasis Type="Italic">Nramp1</Emphasis>) alleles interact with acute inflammation loci to modulate wound-healing traits in mice

Lines of mice were obtained by selective breeding for maximum (AIRmax) or minimum (AIRmin) acute inflammation. They present distinct neutrophil influx and show frequency disequilibrium of the solute carrier family 11a member 1 (Slc11a1) alleles. This gene is involved in ion transport at the endosomes within macrophages and neutrophils, interfering in their activation. Homozygous AIRmax and AIRmin sublines for the Slc11a1 gene were produced to examine the interaction of this gene with the acute inflammatory loci. The present work investigated wound-healing traits in AIRmax and AIRmin mice, in F₁ and F₂ intercrosses, and in Slc11a1 sublines. Two-millimeter ear punches were made in the mice and hole closure was measured during 40 days. AIRmax mice demonstrated significant tissue repair while AIRmin mice did not. Significant differences between the responses of male and female mice were also observed. Wound-healing traits demonstrated a correlation with neutrophil influx in F₂ populations. AIRmax ^SS showed higher ear-wound closure than AIRmax ^RR mice, suggesting that the Slc11a1 S allele favored ear tissue repair. QTL analysis has detected two inflammatory loci modulating ear wound healing on chromosomes 1 and 14. These results suggest the involvement of the acute inflammation modifier QTL in the wound-healing phenotype.     

The role of lipid‐related genes,aging‐related processes,and environment in healthspan

The inherent complexity of aging‐related traits can temper progress in unraveling the genetic origins of healthspan. We focus on two generations in the Framingham Heart Study, the original (FHS) and offspring (FHSO) cohorts, to determine whether aging‐related processes in changing environments can substantially impact the role of lipid‐related genes discovered in candidate gene (the apolipoprotein E (APOE) e2/3/4 polymorphism) and genome‐wide (the APOB rs1042034 (C/T)) studies, in regulation of total cholesterol (TC) and onset of cardiovascular disease (CVD). We demonstrate that the APOE e4 allele and APOB CC genotype can play detrimental, neutral, and protective sex‐specific roles in the etiology of CVD at different ages and in different environments. We document antagonistic roles for the e4 allele in the onset of CVD characterized by detrimental effects at younger ages (RR_{≤ 75 years} = 1.49, P = 7.5 × 10^?4) and protective effects at older ages (RR_76+years = 0.77, P = 0.044) for FHS participants. We found that disregarding the role of aging erroneously nullifies the significant effects of the e4 allele in this sample (RR = 0.92, P = 0.387). The leading biogenetic pathways mediating genetic effects on CVD may be more relevant to lipid metabolism for APOB than APOE. Aging‐related processes can modulate the strength of genetic associations with TC in the same individuals at different chronological ages. We found substantial differences in the effects of the same APOE and APOB alleles on CVD and TC across generations. The results suggest that aging‐related processes in changing environments may play key roles in the genetics of healthspan. Detailed systemic integrative analyses may substantially advance the progress.     

Numbered neck collars for long‐distance identification of parakeets

ABSTRACT Most parakeets, parrots, and cockatoos are difficult to mark because of their strong beaks and ability to manipulate items with their feet. We developed a marking method that consists of a numbered tag hung on a neck collar. We used this method to successfully monitor Monk Parakeets (Myiopsitta monachus) and Ring‐necked Parakeets (Psittacula krameri) in Barcelona, Spain, from 2003 to 2009. We marked 881 Monk Parakeets and 88 Ring‐necked Parakeets with collars. Fifteen tags placed on adult Monk Parakeets in 2003 (N= 57) lasted until 2008 and nine until 2009. Three of 12 Ring‐necked Parakeets marked in 2003 were resighted in 2008. We estimated that 4.5% of Monk Parakeets and 5.8% of Ring‐necked Parakeets lost their tags, with median intervals between attachment and tag loss of 347 and 370 d, respectively. Behavioral observations revealed no differences in the time budgets of marked and unmarked Monk Parakeets. In addition, the mass of marked Monk Parakeets did not change between successive recaptures. These results suggest that neck collars had no adverse effects on the birds. Neck collars may also be a suitable marking method for other psittacines, with stronger, more durable components likely needed for larger species.     

A QUANTITATIVE ANALYSIS OF THE MEGAGAMETOPHYTE OF FIVE SPECIES OF CORNUS L.

Comparisons of variations of morphological features, treated quantitatively, of the megagametophytic stages in Cornus asperifolia Michaux., C. stricta Lam., C. amomum Miller, C. florida L., and C. alternifolia L. suggest differences in growth patterns of their megagametophytes. The successful application of the clearing fluid 41/2 (Herr Fluid) affords adequate data for assessment of quantitative features of such minute plants. This method, less time consuming than traditional paraffin sectioning techniques, allows for statistical treatment of a sufficient number of species for valid inferences of angiospermous embryological features. An investigation of megagametophytic size was directed both to successive stages within each species and to each stage among all five species. In both instances, means, confidence intervals (CI), and growth increments (GI) were compared. Without exception, the largest means for length and width occurred in the 8-nucleate stage for all species. The greatest GI for length occurred in the 8-nucleate stage for C. stricta, C. alternifolia, and C. asperifolia and in the 4-nucleate stage for C. florida. The 4- and 8-nucleate GI were nearly equal for C. amomum. Overlapping of 95 % CI between successive stages indicated uniform growth between stages for the megagametophyte. Only C. asperifolia had CI overlapping between all successive stages for length and width. These five species are clearly separated on the basis not only of variations in qualitative features but also on megagametophytic growth patterns among species.     

The dynamics of histograms of difference between successive RR intervals of ECG during 24 hours as index of the balanced state of neurogenic influences on the heart rate

The quantitative parameters of neurogenic influences on the heart rate is offered: the dispersion of histograms of differences between successive RR intervals of ECG, the number of zero differences and the value of sum of differences between successive RR intervals.     

Q192R polymorphism of <Emphasis Type="Italic">PON-1</Emphasis> gene in type 2 diabetes patients

The Q192R polymorphism of PON-1 gene was genotyped in 96 individuals with diabetes mellitus type 2 (T2DM) and 123 nondiabetic control individuals from Kharkiv. Allele frequencies do not differ significantly between T2DM (p _Q = 0.65 and p _R = 0.35) and healthy individuals (p _Q = 0.70 and p _R = 0.30). Genotype distribution for healthy people complies with the Hardy-Weinberg equilibrium, and the T2DM patients have excess of both homozygotes and deficiency of heterozygotes. The risk of T2DM for QQ homozygotes is 1.47 times higher and for QR heterozygote is twice lower than the population average (2%). The RR homozygote individuals have statistically insignificant, 1.86 times, increase in T2DM risk.     

基于高通量测序的连栽木麻黄根际土壤细菌群落变化研究

选取3个不同连栽代数(第一代First rotation plantation,FCP;第二代Second rotation plantation,SCP;第三代Third rotation plantation,TCP)木麻黄林地根际土壤为研究对象,通过IonS5~(TM)XL二代测序系统,从根际土壤微生物角度探究木麻黄连栽障碍形成机制。结果显示:从3个不同连栽代数木麻黄根际土壤中总共得到338560条有效序列,将其注释为17627个操作分类单元(Operational Taxonomic Units,OTUs)。α多样性指数表明,木麻黄根际土壤细菌群落的Simpson、Chao1、ACE指数随着连栽代数增加而下降,Observed species、Shannon指数呈现先增加后减少的趋势。β多样性指数表明,根际土壤中FCP与SCP之间的细菌群落多样性差异相对较大。UPGMA聚类分析结果阐明,木麻黄根际土壤FCP与SCP、TCP存在较大差异。优势细菌在属水平的热图分析结果表明,不同连栽代数木麻黄根际土壤细菌群落结构存在一定差异。随着木麻黄连栽代数增加,根际土壤中慢生根瘤菌属(Bradyrhizobium)的相对丰度呈上升趋势;与之相反,热酸菌属(Acidothermus)、根微菌属(Rhizomicrobium)、酸杆菌属(Acidibacter)、布氏杆菌属(Bryobacter)随连栽代数增加而下降;其中,与营养循环相关的有益菌属Rhizomicrobium的相对丰度随连栽代数增加而降低约311.49%、282.16%,而酸杆菌属(Acidibacter)的相对丰度随之降低约176.07%、284.54%。因此,木麻黄连栽障碍问题可能是由于根际土壤微生物群落结构失衡导致的,从而降低了森林的生态效益,使平均木生物量、林分生物量及林分净生产力下降。研究结果对揭示木麻黄连栽障碍形成的原因具有一定参考价值。     

Clonal growth of <Emphasis Type="Italic">Typha domingensis</Emphasis> Pers., subject to drawdowns and interference of <Emphasis Type="Italic">Eleocharis mutata</Emphasis> (L.) Roem. et Schult. in a tropical coastal lagoon (Brazil)

This paper presents the results of a study on the clonal growth of Typha domingensis Pers. in the Imboassica lagoon, in the intervals between four drawdowns. Sampling was performed over a period of two years, from permanent quadrats, in the four months after each of the drawdowns. The high mortality of the macrophytes after each drawdown is followed by a period in which the stands recover by producing ramets. The results have shown that the growth areas around the boundary of the stand (boundary band, BB) and one further towards the middle (innermost zone, IZ) show different recovery characteristics. The BB area recovered more quickly after the first drawdown, but both areas had the same accumulated biomass after the third drawdown. At the contact boundary, (CB) with stand of Eleocharis mutata, a decrease in the growth of T. domingensis occurred with a progressive invasion of E. mutata in its stand. After 10 months with no drawdown, T. domingensis produced a large quantity of inflorescences, which indicates recovery. It can therefore be concluded that successive drawdowns may decrease the regeneration ability of T. domingensis, favoring the expansion of E. mutata in the lagoon.     

Reduction of the response to sex pheromone in the oriental fruit moth,Grapholita molesta (Lepidoptera: Tortricidae) following successive pheromonal exposures

The effects of prior pheromonal experience upon the pheromone- mediated upwind flight response was examined in the oriental fruit moth, Grapholita molesta(Busck) (Lepidoptera: Tortricidae). Adult male G. molestawere subjected to a parallel series of staggered and repeated pheromonal exposures in a sustained-flight wind tunnel. Levels of response to pheromone in male G. molestasignificantly decreased in a (a) rectilinear function with increased ages of individuals, (b) logarithmic function of successive trials, and (c) steeper logarithmic function of successive trials with increased dosage of sex pheromone. The baseline levels of responding were not affected by either the (a) dosage of sex pheromone, (b) posteclosion ages of individuals for their initial exposures once the main effect of age itself was estimated, (c) elapsed time in hours between trials, or (d) discrete days of testing as integral intervals, disregarding hours within days.     

Identifying patterns in the diet of mackerel icefish (<Emphasis Type="Italic">Champsocephalus gunnari)</Emphasis> at South Georgia using bootstrapped confidence intervals of a dietary index

Ontogenetic, inter-annual and regional variations in diet were investigated for mackerel icefish, Champsocephalus gunnari, in three successive summer seasons around South Georgia. Stomach contents from 2239 C. gunnari (130–560 mm total length) were examined. A bootstrapping technique was used to calculate confidence intervals for an index of relative importance of prey categories (% IRI_DC). Diet varied significantly between years and age classes but there was little regional difference in diet. In general, diet was dominated by krill, Euphausia superba and by the amphipod Themisto gaudichaudii. Smaller (younger) fish tended to prey on a higher proportion of T. gaudichaudii and small euphausiids such as Thysanoessa sp. and took smaller quantities of E. superba. In a season of poor krill availability (summer of 2003–2004) the proportion of krill in the diet, stomach fullness and fish condition (indicated by length–weight relationships) were significantly lower than in the other summer seasons. A large reduction (>80%) in the estimated annual (2005) biomass of the C. gunnari stock directly followed the season of poor krill availability. This decline was largely because of mortality of 2+ and 3+ fish, which were more krill dependent than 1+ fish. Younger fish appear to have survived, leading to an increase in the estimated population biomass in 2006.