Availability of and access to critical habitats in regulated rivers: effects of low-head barriers on threatened lampreys

1.  Conservation of freshwater animal populations requires their access to, as well as sufficient availability of, critical habitats, such as those for reproduction. Abundant small-scale barriers may cause extensive fragmentation of freshwater habitat but, by comparison to larger structures their effects are rarely considered by catchment managers. The relationship between the distribution of, and access to, spawning habitat in a regulated river, characterized by abundant small barriers, was examined for river lamprey Lampetra fluviatilis , a threatened migratory fish.
2.  Telemetry of adult lamprey in the River Derwent, North East England was used to quantify upriver migration and access to spawning habitat, together with surveys of spawning habitat availability and spawning activity between 2002 and 2007.
3.  Access in to the Derwent appeared severely restricted by a tidal barrage, beyond which lamprey migrated rapidly in unobstructed reaches. Of all lamprey tagged in the lower 4 km of river, or ascending the barrage, 64% and 17% passed the first and second weirs respectively, with high flows crucial for this. Although over 98% of lamprey spawning habitat occurred more than 51 km upstream, on average just 1.8% of river lamprey spawners were recorded there.
4.  In order to protect or rehabilitate species or species assemblages, greater attention needs to be paid to the relative spatial distribution of low-head barriers and the resultant availability of key habitats within individual catchments. This is particularly important given the renewed emphasis internationally on low-head hydropower solutions as a source of renewable energy, and the rapid growth in numbers of low-head barriers in many catchments.     

Conservation Strategies for Orangutans: Reintroduction versus Habitat Preservation and the Benefits of Sustainably Logged Forest

The Sumatran orangutan is currently listed by the IUCN as critically endangered and the Bornean species as endangered. Unless effective conservation measures are enacted quickly, most orangutan populations without adequate protection face a dire future. Two main strategies are being pursued to conserve orangutans: (i) rehabilitation and reintroduction of ex-captive or displaced individuals; and (ii) protection of their forest habitat to abate threats like deforestation and hunting. These strategies are often mirrored in similar programs to save other valued and endangered mega-fauna. Through GIS analysis, collating data from across the literature, and combining this information within a modelling and decision analysis framework, we analysed which strategy or combination of strategies is the most cost-effective at maintaining wild orangutan populations, and under what conditions. We discovered that neither strategy was optimal under all circumstances but was dependent on the relative cost per orangutan, the timescale of management concern, and the rate of deforestation. Reintroduction, which costs twelve times as much per animal as compared to protection of forest, was only a cost-effective strategy at very short timescales. For time scales longer than 10–20 years, forest protection is the more cost-efficient strategy for maintaining wild orangutan populations. Our analyses showed that a third, rarely utilised strategy is intermediate: introducing sustainable logging practices and protection from hunting in timber production forest. Maximum long-term cost-efficiency is achieved by working in conservation forest. However, habitat protection involves addressing complex conservation issues and conflicting needs at the landscape level. We find a potential resolution in that well-managed production forests could achieve intermediate conservation outcomes. This has broad implications for sustaining biodiversity more generally within an economically productive landscape. Insights from this analysis should provide a better framework to prioritize financial investments, and facilitate improved integration between the organizations that implement these strategies.     

气候速度影响下中国周边海域鲨鱼保护优先区识别

鲨鱼在气候变化和人类活动等因素的影响下面临着种群衰退的风险,开展鲨鱼保护优先区研究是鲨鱼保护行动的重要工作.将气候速度引入鲨鱼保护优先区的识别过程,旨在阐明中国周边海域鲨鱼现状保护成效和保护空缺,并预测气候速度影响下的鲨鱼保护优先区空间格局及其变化趋势.以集成物种分布模型模拟的146种鲨鱼栖息地作为保护对象,以2015年至2100年两种气候变化情景下的气候速度作为保护的机会成本,基于系统保护规划理论模拟现状和未来情景下的鲨鱼保护优先区选址方案.研究结果表明：（1）长江口以南至台湾海峡和北部湾近岸海域为鲨鱼多样性分布的主要区域,台湾海峡区域亦为珍稀濒危物种的重要分布区;（2）在两种气候情景下,南海中南部将面临较高的气候变化风险,而长江口以南至珠江口的近岸海域气候速度均相对较低,提示了这些区域或能成为气候变化影响下的生物避难所;（3）现有保护区仅保护了1.33%的海域和不到4%的鲨鱼物种,尚存在较大的保护空缺.当保护海域比例提升至10%时,可覆盖绝大多数鲨鱼物种.而当比例提升至30%时,珍稀濒危物种的栖息地将得到有效保护;（4）气候变化影响下保护优先区选址将发生不同程度的变化,尤其是在中国南海区域,如在保护规划时兼顾气候速度,可在满足相似保护目标的前提下减少保护优先区内25%以上的气候压力,以使其具有较强的应对气候变化潜力。     

Capture and collection of lampreys: the state of the science

The need for native lamprey conservation, improved lamprey fishery management, and better assessment of non-indigenous lamprey control measures has resulted in increased effort to survey lamprey populations and assess their status. Depending on the study objectives and target species/life stage, collection methods vary dramatically. We therefore provide a comprehensive review of sampling considerations and techniques used to capture, collect, handle, and enumerate both juvenile and adult lamprey life stages. Surveys for lamprey are often constrained by the lack of basic biological information, such as reliable characters for field identification of larvae (ammocoetes), migratory timing of anadromous forms, and spawning/nest building behavior of adults. However, there are a number of studies that have documented habitat preferences of the relatively sedentary ammocoetes. Consequently, existing sampling protocols have focused on the development of stratified sampling that targets optimal ammocoete habitat. In addition to this approach, we discuss methods and gear that can be used to survey migratory life stages, lamprey nests, and difficult-to-sample, deepwater ammocoete habitats.     

Habitat selection by larvae of a fluvial lamprey, <Emphasis Type="Italic">Lethenteron reissneri</Emphasis>, in a small stream and an experimental aquarium

Habitat selection by fluvial lamprey larvae, Lethenteron reissneri (Petromyzontidae), was studied in a natural stream and an experimental aquarium to clarify microhabitat requirements for future conservation of natural populations. A gross collection survey of lamprey larvae in the Monbetsu River, southeastern Hokkaido, Japan, revealed a remarkable bias toward distribution in sandy-mud beds. An analysis using Jacobs' electivity index showed that the larvae selectively utilized spaces having regard to shallow water, weak current, deep sandy-mud, and fine substrate particles. A comparison of microhabitat use between small- (≤5 cm) and large-sized larvae (>5 cm) indicated that the latter utilized the space with greater ranges in both water depth and substrate particle size than the former. Both the field survey and laboratory experiments on larval selectivity of physical habitat variables clearly demonstrated that substrate particle size was the most important variable for small-sized larvae whereas both water depth and substrate depth were more important for large larvae. These findings should be applicable in directing attempts at fluvial habitat restoration for conservation of this endangered lamprey species. Received: November 1, 2000 / Revised: September 12, 2001 / Accepted: October 18, 2001     

Spawning seasons of Rasbora tawarensis (Pisces: Cyprinidae) in Lake Laut Tawar,Aceh Province,Indonesia

Background  

Rasbora tawarensis is an endemic freshwater fish in Lake Laut Tawar, Aceh Province, Indonesia. Unfortunately, its status is regarded as critical endangered with populations decreasing in recent years. To date no information on the spawning activities of the fish are available. Therefore, this study provides a contribution to the knowledge on reproductive biology of R. tawarensis especially on spawning seasons as well as basic information for conservation of the species.     

Does proactive biodiversity conservation save costs?

Ecologists usually argue for a proactive approach to species conservation—it should start before a species is endangered and under substantial risk of extinction. In reality, however, conservation often only starts when species populations are already in a critical state. This may be the result of a policy process in which those actors who see only little or no benefits from conserving species try to delay conservation as long as possible to avoid its cost. A frequent consequence is that populations decline to critical levels so that once conservation policies set in due to legal obligations, political pressure or any other reason, additional conservation measures are required to re-establish the populations. We show that the costs associated with this policy process may be higher than those of a proactive policy. This is somewhat surprising because the costs of maintaining populations at a level at which they are not endangered may occur over a longer period. However, the costs of bringing species populations back to those levels may be so high that they outweigh the costs of the proactive approach. We develop simple cost functions that capture the main economic and ecological parameters relevant to our argument and apply them for an assessment of the costs of common hamster (Cricetus cricetus) conservation in the region of Mannheim, Germany. We find that a proactive approach would have saved between €17.2 and €36.4 mn compared to the existing policy where conservation was delayed until legal requirements forced local policy makers to implement a comprehensive hamster protection programme.     

Assessment of conservations actions for the critically endangered spotted handfish (Brachionichthyidae), following curation of data collected by multiple investigators into a long-term time-series

Multi-decadal datasets for endangered species that track both populations and performance of management interventions are rare. One such dataset is for the critically endangered Spotted handfish, a species which has been used as a conservation model for the most endangered of the marine bony fish families the Brachionichthyidae. We assessed a 23-year, multi-site, time-series of population density surveys for the spotted handfish as well as a conservation intervention, the planting of ∼ 14,000 artificial spawning habitats (ASH). Data ownership spanned multiple Principal Investigators (PIs) and key data and covariates, such as monitoring and interventions, were often documented within personal files and difficult to access grey literature. We consolidated and curated these data, identifying gaps in the time-series and their causes and isolating confounding factors before we assessed population trends and the effectiveness of ASH planting. Both funding gaps and the 2020 Covid-19 lockdown produced breaks in the time-series. Breeding season observations mostly occurred in the early part of the dataset and there was also a change in method that needed to be considered when interpretating the time-series. There was an overall decline in fish observed between 1997 and 2019 but, at least since 2014, there has been stabilisation of the population. Local populations of spotted handfish can either be highly dynamic or relatively stable but population increases were linked to the long-running, conservation intervention of planting ASH. As local populations can be dynamic, the functional life span of the ASH is limited and threats to the species - chronic, stochastic and climate - are ongoing, spotted handfish may be a ‘conservation reliant’ species that require annual site-specific monitoring, insitu interventions and existu captive husbandry.     

Poor water quality constrains the distribution and movements of twaite shad <Emphasis Type="Italic">Alosa fallax</Emphasis><Emphasis Type="Italic">fallax</Emphasis> (Lacépède, 1803) in the watershed of river Scheldt

Worldwide, river fragmentation is primarily responsible for the decline of populations of migrating fish. In particular, anadromous fish species, which necessarily migrate to fresh water to reproduce, are endangered since many are no longer able to reach their natural spawning sites. In addition, pollution of rivers effectively prevents upstream or downstream movements and blocks access to spawning grounds. This article investigates how poor water quality interferes with the life history cycle of twaite shad Alosa fallax fallax (Lacépède, 1803), an anadromous clupeid fish, in the watershed of River Scheldt, a heavily impacted environment in West Europe. We used two models based on known ecological and environmental information to explain past and present twaite shad distribution within the watershed and to make inferences about a future population recovery and juvenile habitat value. We demonstrated that historical spawning areas satisfy water quality conditions necessary to support spawning and successful development of early life history stages of the twaite shad. However, poor water quality conditions just upstream the freshwater–saltwater boundary still act as an effective migration barrier for upstream movement. As a consequence, spawning grounds are inaccessible and the population is dominated by seasonal adults occurring in the lower estuarine part of the watershed. This article provides testable and diagnostic information to the watershed management in that it identifies habitat and water quality requirements needed to support the expected recovery of an endangered anadromous fish population. Guest editors: S. Dufour, E. Prévost, E. Rochard & P. Williot Fish and diadromy in Europe (ecology, management, conservation)     

Use of microsatellite data and pedigree information in the genetic management of two long-term salmon conservation programs

In this paper, we describe the utility of microsatellite data and genetic pedigree information to guide the genetic management of two long-term conservation programs for endangered populations of salmon: Snake River Sockeye Salmon, Oncorhynchus nerka, and inner Bay of Fundy Atlantic Salmon, Salmo salar. Both programs are captive broodstock (live gene banking) programs for endangered populations of salmon. In order for these programs to be successful for recovery efforts, genetic change, including accumulation of inbreeding, loss of genetic variation, and adaptation to captivity, must be minimized. We provide an overview of each program, describe broodstock selection and pairing for spawning, and discuss how pedigree data are being used to evaluate different management practices. While there are inherent species and programmatic differences, both of these programs use widely accepted genetic conservation strategies (minimize mean kinship, reduce variance in family size, minimize inbreeding in the next generation, maintain large census and effective population size) to potentially mitigate some unintended side-effects associated with the rearing of small populations in captivity. These case studies highlight the benefits and practical limitations of applying these strategies in the genetic management of salmon, and may be used to inform other conservation programs.     

Preliminary distributional analysis of US endangered bird species

A first exploration of applications of ecological niche modeling and geographic distributional prediction to endangered species protection is developed. Foci of richness of endangered bird species are identified in coastal California and along the southern fringe of the United States. Species included on the Endangered Species List on the basis of peripheral populations inflate these concentrations considerably. Species without protection in the US National Park System are focused particularly in peninsular Florida. Application of this methodology to additional taxa and regions holds promise for diverse conservation applications.     

Population Status of North American Green Sturgeon, Acipenser medirostris

North American green sturgeon, Acipenser medirostris, was petitioned for listing under the Endangered Species Act (ESA). The two questions that need to be answered when considering an ESA listing are; (1) Is the entity a species under the ESA and if so (2) is the “species” in danger of extinction or likely to become an endangered species in the foreseeable future throughout all or a significant portion of its range? Green sturgeon genetic analyses showed strong differentiation between northern and southern populations, and therefore, the species was divided into Northern and Southern Distinct Population Segments (DPSs). The Northern DPS includes populations in the Rogue, Klamath-Trinity, and Eel rivers, while the Southern DPS only includes a single population in the Sacramento River. The principal risk factors for green sturgeon include loss of spawning habitat, harvest, and entrainment. The Northern DPS is not considered to be in danger of extinction or likely to become an endangered species in the foreseeable future. The loss of spawning habitat is not large enough to threaten this DPS, although the Eel River has been severely impacted by sedimentation due to poor land use practices and floods. The two main spawning populations in the Rogue and Klamath-Trinity rivers occupy separate basins reducing the potential for loss of the DPS through catastrophic events. Harvest has been substantially reduced and green sturgeon in this DPS do not face substantial entrainment loss. However there are significant concerns due to lack of information, flow and temperature issues, and habitat degradation. The Southern DPS is considered likely to become an endangered species in the foreseeable future. Green sturgeon in this DPS are concentrated into one spawning area outside of their natural habitat in the Sacramento River, making them vulnerable to catastrophic extinction. Green sturgeon spawning areas have been lost from the area above Shasta Dam on the Sacramento River and Oroville Dam on the Feather River. Entrainment of individuals into water diversion projects is an additional source of risk, and the large decline in numbers of green sturgeon entrained since 1986 causes additional concern.     

Dual Annual Spawning Races in Atlantic Sturgeon

Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus, Acipenseridae) populations in the United States were listed as either endangered or threatened under the Endangered Species Act in 2012. Because of the endangered/threatened status, a better understanding of Atlantic sturgeon life-history behavior and habitat use is important for effective management. It has been widely documented that Atlantic sturgeon reproduction occurs from late winter to early summer, varying clinally with latitude. However, recent data show Atlantic sturgeon also spawn later in the year. The group that spawns later in the year seems to be completely separate from the spring spawning run. Recognition of the later spawning season has drastically modified estimates of the population status of Atlantic sturgeon in Virginia. With the combination of new telemetry data and historical documentation we describe a dual spawning strategy that likely occurs in various degrees along most, if not all, of the Atlantic sturgeon''s range. Using new data combined with historical sources, a new spawning strategy emerges which managers and researchers should note when determining the status of Atlantic sturgeon populations and implementing conservation measures.     

Potential changes to the biology and challenges to the management of invasive sea lamprey Petromyzon marinus in the Laurentian Great Lakes due to climate change

Control programs are implemented to mitigate the damage caused by invasive species worldwide. In the highly invaded Great Lakes, the climate is expected to become warmer with more extreme weather and variable precipitation, resulting in shorter iced‐over periods and variable tributary flows as well as changes to pH and river hydrology and hydrogeomorphology. We review how climate change influences physiology, behavior, and demography of a damaging invasive species, sea lamprey (Petromyzon marinus), in the Great Lakes, and the consequences for sea lamprey control efforts. Sea lamprey control relies on surveys to monitor abundance of larval sea lamprey in Great Lakes tributaries. The abundance of parasitic, juvenile sea lampreys in the lakes is calculated by surveying wounding rates on lake trout (Salvelinus namaycush), and trap surveys are used to enumerate adult spawning runs. Chemical control using lampricides (i.e., lamprey pesticides) to target larval sea lamprey and barriers to prevent adult lamprey from reaching spawning grounds are the most important tools used for sea lamprey population control. We describe how climate change could affect larval survival in rivers, growth and maturation in lakes, phenology and the spawning migration as adults return to rivers, and the overall abundance and distribution of sea lamprey in the Great Lakes. Our review suggests that Great Lakes sea lamprey may benefit from climate change with longer growing seasons, more rapid growth, and greater access to spawning habitat, but uncertainties remain about the future availability and suitability of larval habitats. Consideration of the biology of invasive species and adaptation of the timing, intensity, and frequency of control efforts is critical to the management of biological invasions in a changing world, such as sea lamprey in the Great Lakes.     

Ecological analogies in the Pacific lamprey <Emphasis Type="Italic">Lethenteron camtschaticum</Emphasis> and the mykiss <Emphasis Type="Italic">Parasalmo mykiss</Emphasis> in Kamchatka

Ecological analogies between the Pacific lamprey Lethenteron camtschaticum and various species of salmonids (Salmonidae) are noted. Close analogies are found with the mykiss Parasalmo mykiss. The lamprey and mykiss are characterized by spawning in spring. In their populations there are specimens with anadromous and riverine life strategies. The mechanism of formation of life strategies seems to be similar in both species. The major role belongs to the trophic factor determining the level of energy resources necessary for maturation. Such analogies result from epigenetic changes in principal ecological parameters and are formed under the influence of similar environmental factors.     

重要物种优先保护种群的确定

由于同一物种不同种群的重要性不同、用于物种保护的资金有限以及保护与发展经济之间的矛盾,因此对于重要物种（尤其是濒危种类以及农作物和驯化动物的野生近缘种）需要确定保护什么以及保护哪儿。目前确定优先保护种群的方法主要有3类,分别为基于遗传变异、基于遗传差异性和基于遗传贡献率的方法。基于遗传变异的方法主要是根据遗传变异程度（尤其是等位基因多样性）来确定优先保护的顺序,但忽略了种群之间的遗传差异性,这容易使得存在于遗传变异程度较低的种群中的特有等位基因得不到有效保护。而基于遗传差异性的方法（如确定进化显著单元）则是从遗传分化程度的角度考虑优先性,即独特性越强的种群越具有保护价值。基于遗传贡献率的方法由于综合考虑了遗传多样性和差异性,最适合于确定哪些种群需要优先保护。我国开展此类研究十分必要。     

Threatened species, a re-evaluation of the status of eight endemic plants of the Gala´pagos

Although still in relatively good condition, the Gala´pagos Archipelago suffers from increasing human pressures. Apart from direct actions like hunting and logging, endemic plants and animals are threatened by introduced species, and in many cases the present status of the populations is not known. The conservation status of eight plant species considered endangered was studied from literature and field surveys and the main threats were determined. Each of the eight species is endemic to only one island but in some cases is also present on nearby islets. Of these eight species, one is considered extinct, one critically endangered, and the others suffer various levels of threat. As in all island systems of the world, the main threats are introduced organisms, both plants and animals. The extinct species probably disappeared owing to invasion by Lantana camara, one of the most aggressively invasive plants of the islands, and the most endangered species is threatened by goats. The remaining species seem to be regenerating well and we can expect positive results from protection efforts. Today, only one of the eight species benefits from a direct protection action.     

The ecology, behavior, and conservation of the tidewater goby, Eucyclogobius newberryi

Understanding the ecology and behavior of endangered species, such as the tidewater goby, Eucyclogobius newberryi, is important for identifying problems and formulating solutions for species recovery. The tidewater goby forms isolated populations in California's coastal lagoons, creeks, and marshes. Rapid declines in the number of populations led to its listing as an endangered species in 1994. This benthic fish prefers stillwater habitats and feeds on small invertebrates. It is an annual species with an extended breeding season. Fish are larger in marsh habitats than in lagoon or creek habitats. The male digs a spawning burrow, preferably in sand, where he provides care for a single clutch. The tidewater goby is sex-role reversed: females compete more intensely than males for access to mates. The tidewater goby is a species at risk, in part due to narrow habitat preferences, isolation of populations, short lifespan, lack of marine dispersal, and vulnerability to introduced predatory fishes. Attributes that favor its recovery include euryhaline tolerances, rapid reproductive rate, its potential for opportunistic feeding, and the possibility of natural recolonization under certain circumstances. Potential conservation measures include protecting coastal marshes that adjoin creeks and lagoons, maintaining natural hydrologic regimes, preventing artificial breaching of the sandbar at the estuary's mouth, and preventing introductions of predatory fishes. Captive breeding and reintroduction of tidewater gobies are potential tools for recovery, provided that underlying problems of habitat availability and suitability and issues of genetic integrity and disease transmission are addressed. Further research into the tidewater goby's utilization of marsh habitats, dispersal mechanisms, response to artificial breaching events, and metapopulation genetics would provide additional information for management.