Increased nutrient loads from the Changjiang (Yangtze) River have led to increased Harmful Algal Blooms

Based on observations collected during 15 cruises from 2002 to 2007 and on historical data, annual and seasonal variations in dissolved inorganic nutrients in the Changjiang (Yangtze) River estuary and the adjacent area were investigated. The importance of nutrients and nutrient fluxes to Harmful Algal Blooms (HABs) in the East China Sea (ECS) was also studied. The results showed an increasing trend in dissolved inorganic nitrogen (DIN) over the past fifty years. The changes in the PO₄-P concentration fluctuated from 1959 to 2000, but the level has been almost stable since then. By contrast, the SiO₃-Si concentrations decreased significantly over the past fifty years. Regarding seasonal variations, nutrients usually exhibited high values during autumn and winter, and the lowest values occurred in mid-summer. A strong positive relationship was observed between the DIN and PO₄-P concentrations and the frequency or scale of HABs, indicating that eutrophication played a crucial role in the occurrence of HABs. As for nutrient fluxes, DIN and PO₄-P fluxes have climbed sharply since 1980. In the ECS, the DIN increased sharply, but PO₄-P concentrations only changed slightly. The increased nutrient discharges, especially DIN, could also have caused the strong increase in the frequency and area of HABs. The areas of hypoxic bottom water off the Changjiang River estuary presented an increasing trend over the past fifty years, which may also be attributable to eutrophication. Changes in the nutrient composition were also investigated in the present study. The N/P ratio increased dramatically over the past fifty years, while the Si/N ratio decreased. The percentage of diatoms decreased from 99% to 73%, while dinoflagellates increased from less than 1% to over 25% during the past fifty years. Therefore, long-term changes in nutrients, especially excess DIN and increasing N/P, could be responsible for the shift in the phytoplankton community structure.     

Resolving the origins of invertebrate colonists in the Yangtze River Estuary with molecular markers: Implications for ecological connectivity

Understanding connectivity over different spatial and temporal scales is fundamental for managing of ecological systems. However, controversy exists for wintertime ecological connectivity between the Yangtze River Estuary (YRE) and inner southwestern Yellow Sea. Here, we investigated ecological connectivity between the YRE and inner southwestern Yellow Sea in wintertime by precisely pinpointing the source of the newly colonized populations of a winter‐spawning rocky intertidal invertebrate, Littorina brevicula (Philippi, 1844), on artificial structures along the coast of the Yangtze River Delta (YRD) using mitochondrial ND6 sequences and microsatellite data. Clear phylogeographic and genetic differentiation were detected between natural rocky populations south and north of the YRE, which resulted from the lack of hard substrate for rocky invertebrates in the large YRD coast. For the newly colonized populations on the coast of YRD, most individuals (98%) to the south of ~33.5°N were from natural rocky populations to the south of the YRE and most of those (94%) to the north of ~33.5°N were from the northern natural rocky populations, which demonstrated strong ecological connectivity between the inner southwestern Yellow Sea and the YRE in winter time. We presented the first genetic evidence that demonstrated a northward wintertime coastal current in the inner southwestern Yellow Sea, and precisely illustrated the boundary of the coastal current recently proposed by numerical experiment. These results indicated that the YRE serves as an important source of materials and energy for the inner southwestern Yellow Sea in winter, which can be crucial for the function of the Yellow Sea ecosystem.     

Seasonal distribution of dinoflagellate resting cysts in surface sediments from Changjiang River Estuary

In order to understand the distribution of dinoflagellate cysts, surface sediments were collected from 15 stations in Changjiang River Estuary from 122°E to 123.5°E and from 29°N to 32°N in four cruises from May 2002 to February 2003. In the present study, 38 different cyst morphotypes representing 21 genera and 6 groups were identified, while 1 type was not identified into genus level. Species number and cell density of dinoflagellate cysts ranged from 10 to 25 species and from 12 to 587 per gram of dry weight, respectively. There were no obvious differences in cyst composition and density among seasons. However, the highest cyst species number and density were recorded in summer and winter, respectively. Cysts of heterotrophic dinoflagellates, which held 55.7% of the overall cyst density averagely, dominated cyst assemblages. Cyst density and species number increased from the west to the east, from the north to the south within the study area. Cysts of toxic dinoflagellates Alexandrium cat‐enella and Alexandrium tamarense complex distributed widely and were observed in almost all stations, with the maximum cell density of 81 per gram of dry weight.     

Shift of Bacterial Community Structures in Sediments From the Changjiang (Yangtze River) Estuary to the East China Sea Linked to Environmental Gradients

Abstract

The Changjiang estuary and its adjacent East China Sea (ECS) have been considered as one of the most dynamic areas significantly contributing to elemental exchanges globally. The purpose of this study was to understand the alteration of microbial consortia at the interface of riverine and coastal environments in relation to environmental variations as well as their roles in biogeochemical cycling at this dynamic region. We sampled surface sediment samples at 4 stations from the estuary to coastal regions of the ECS. Along with collections of physicochemical parameters, we sequenced bacterial 16S rRNA genes of clones from each sample. Results showed a distinct transition of bacterial community from typical freshwater sediment phyla (e.g., Betaproteobacteria and Firmicutes) to those commonly inhabited in saline environments (e.g., Deltaproteobacteria and Gammaproteobacteria). The bacterial group at the transition zone characterized by high accumulation of organic matters and intense mixing of riverine and coastal waters was most diverse. Bacterial community structures at two ECS stations showed a similar pattern but contained different dominant taxa, shifting from Deltaproteobacteria-affiliated sulfate-reducing bacteria at the station closer to the shore to Gammaproteobacteria-affiliated nitrate-reducing bacteria further offshore. It suggested that the sedimentary bacterial community structure was related to salinity, sediment type, and substrate availability and composition.     

长江口及东海夏季小型底栖动物丰度和生物量变化

2012年7月,对长江口及东海海域的小型底栖动物类群组成、丰度、生物量的空间分布及其与沉积环境的关系进行了调查研究。该研究海域夏季小型底栖动物的丰度和生物量总体上自北向南递减,在长江口以东的海域由近岸向外海增加,至约45 m等深线达到最高,然后向深水区减少。其小型底栖动物的丰度和生物量分别为(1203±191) 个/10 cm²和(723±171) μg 干重/10 cm²,略高于同一海域春季和秋冬季的数量,但明显低于以往夏季的数量,这可能与本年度该海域沉积物中叶绿素a含量明显偏低有关。在小型底栖动物11个主要类群中,自由生线虫在丰度上占绝对优势(94.1%),其次是桡足类(2.7%)和涡虫类(1.2%)。线虫在生物量上也是最优势类群(62.1%),其次是多毛类(18.8%)、桡足类(8.3%)和涡虫类(6.1%)。Spearman相关分析表明,小型底栖动物的生物量、桡足类和涡虫的丰度均与沉积物中有机氮含量呈负相关;多毛类的丰度与盐度、叶绿素a呈显著正相关;而线虫与所测环境因子未见任何相关关系。BIOENV分析显示,与小型底栖动物各类群的丰度相关性最高的环境因子组合为盐度、沉积物含水量和有机氮含量。研究发现,近10年该海域小型底栖动物的丰度呈总体下降趋势;而且,小型底栖动物的垂直分布随时间推移趋向于向沉积物表层聚集,一定程度上显示沉积环境趋于恶化。通过对近岸和外海两个站位的702条线虫生物体积的测算,获得两个站位线虫的平均个体干重分别为0.186 μg/个体和0.281 μg/个体,两站位平均为0.214 μg/个体,与2009年秋冬季相邻两站位的0.213 μg/个体非常接近,但各站位的线虫个体干重变化相对较大。该结果一方面反映了我国当前普遍采用的0.4 μg/个体系数高估了线虫的生物量,另一方面显示季节和站位差异影响了线虫个体的大小。     

More than meets the eye: detecting cryptic microgeographic population structure in a parasite with a complex life cycle

Nonrandom recruitment of parasites among hosts can lead to genetic differentiation among hosts and mating dynamics that promote inbreeding. It has been hypothesized that strictly aquatic parasites with intermediate hosts will behave as panmictic populations among hosts because ample opportunity exists for random mixing of unrelated individuals during transmission to the definitive host. A previous allozyme study on the marine trematode Lecithochirium fusiforme did not support this hypothesis; in that, there was genetic differentiation among, and significant heterozygote deficiencies within, definitive hosts. We revisit this system and use microsatellites to obtain multilocus genotypes. Our goal was to determine whether cryptic subgroups and/or the presence of clones could account for the apparent deviation from 'panmixia'. We find strong evidence for cryptic subdivision (three genetic clusters) that causes the Wahlund effect and differentiation among definitive hosts. After accounting for these cryptic groups, we see panmictic genetic structure among definitive hosts that is consistent with the 'high mixing in aquatic habitats' hypothesis. We see evidence for cotransmission of clones in all three clusters, but this level of clonal structure did not have a major impact in causing deviations from Hardy-Weinberg equilibrium, and only affected genetic differentiation among hosts in one cluster. A cursory examination of the data may have led to incorrect conclusions about nonrandom transmission. However, it is obvious in this system that there is more than meets the eye in relation to the actual make-up of parasite populations. In general, the methods we employ will be useful for elucidating hidden patterns in other organisms where cryptic structure may be common (e.g. those with limited morphology or complex life histories).     

长江口及邻近海域小型底栖生物丰度和生物量

“东方红2号”调查船于2003年6月在长江口外(28°N°至32°N,121°E至123°E)陆架浅海水域进行了小型底栖生物的取样。研究表明,小型底栖生物的平均丰度为(1971±583.9)ind10cm-2,平均生物量为(1393±516.1)μgdwt10cm-2,平均生产量为(12543±4644.7)μgdwt10cm-2a-1。共鉴定出21个小型生物类群,其中自由生活海洋线虫为最优势的类群,占小型生物总丰度的91%和总生物量的51%。其他数量上较重要的类群还有底栖桡足类、多毛类、动吻类和双壳类等。相关分析表明,小型底栖生物的数量分布与沉积物叶绿素和脱镁叶绿酸的含量呈高度显著相关。台风前后8号站线虫群落的比较研究表明,台风后线虫群落在丰度,生物量及种类组成上均发生了一定的变化,对台风的响应较为显著。典型站位自由生活海洋线虫种类组成的分析表明,长江入海口向外线虫优势度降低,多样性增加。     

Population genetic structure of Vitex negundo (Verbenaceae) in Three-Gorge Area of the Yangtze River: The riverine barrier to seed dispersal in plants

Previous studies have demonstrated that large rivers can influence inter- and intra-specific gene flow for many animals. The effects of large rivers on the genetics of plant populations have focused on either hydrochoric impacts of water current on gene flow or genetic differentiation among populations from different watersheds. Few studies have explicitly tested the barrier effects on plant gene flow across banks of large rivers, especially their relative effects on pollen and seed dispersals. The Yangtze River (Changjiang River), one of the major rivers of the world, provides an excellent model to evaluate the impacts of rivers on gene flow in plants. Using RAPD (random amplified polymorphic DNA) and cpDNA (chloroplast DNA) markers, we investigated the genetic structure of 10 populations of Vitex negundo in two regions of Three-Gorge Area along the Yangtze River. Each region contained two populations on the north bank, two on the south bank and one island population along the river. The analyses indicated low RAPD between banks, and similar or a little higher differentiation between populations within the same bank. In contrast, a large proportion of chloroplast polymorphism was ascribed to among-bank variation but much lower cpDNA differentiation was among populations within the same bank. These results indicate that the Yangtze River represents a general barrier to the dispersal of seeds but not to the movement of pollen in V. negundo. The cpDNA genetic distances or differentiations between the island populations and those on either bank of the river are intermediate to those between the banks across the river, implying that the islands in the Yangtze River may serve as a stepping-stone for seed dispersal. Our results suggest that large rivers may serve as a general barrier, not only for the movement of animals, but also for the dispersal of plants, which should be of great significance for the conservation of biodiversity around the rivers.     

Distribution of the oceanic insects Halobates (Hemiptera: Gerridae) off the south coast of Japan

Specimens of ocean skaters Halobates were collected off the south coast of Japan in the East China Sea in 1995, and from the Kumano‐nada Sea to the East China Sea in 1998 and 1999. Three species were identified: H. micans, H. germanus and H. sericeus. We found two species co‐occurring in comparable densities in different years, a phenomenon not hitherto reported in other regions of the ocean. We discuss distributions of the three Halobates species with special reference to the influence of the Kuroshio Current, temporal variations of sea‐surface temperature, and monsoonal winds.     

长江源区植物区系研究

长江源区位于青海省西南部 ,北纬 31°35′～ 36°30′,东经 89°35′～ 97°55′。本地区共有种子植物 62科、32 1属、1 377种。区系特征表现为 :1 .温带成分占 96.81 % ,以绝对优势确定了本区系明显的温带性质。2 .世界成分多为衍生 ,更兼所含的中国特有属亦多为衍生 ,表明本区系的年轻性和衍生的性质。 3.主要植被均属典型的高寒类型 ,它们的建群种亦多为典型的高寒植被的特征种。所以 ,本区系高寒植被典型 ,特征种典型 ,高寒区系特色明显。4.生态环境对本区系特征的塑造表现为高寒生态因子的选择和高山特化的作用强烈 ,而在一定程度上湿冷生性质和寒旱生性质的高山特化作用更为明显。长江源区的植物区系是唐古特地区高山区系的代表之一。在中国特有种的分析中 ,本区系与横断山和甘肃南部区系的联系最为密切 ,三者间的共有种最为丰富 ,有 593种 ,占本区中国特有种的 74.69%。关于唐古特地区的南部界线 ,作者认为 ,李锡文等 (1 993)的“川西北、甘西南、青东南小区”同唐古特地区关系最为密切 ,若能在考虑这一因素的前提下来划分似乎更合适 ,也更能体现唐古特地区作为一个独立区系的自然界线。     

More to legs than meets the eye: Presence and function of pheromone compounds on heliothine moth legs

Chemical communication is ubiquitous in nature and chemical signals convey species-specific messages. Despite their specificity, chemical signals may not be limited to only one function. Identifying alternative functions of chemical signals is key to understanding how chemical communication systems evolve. Here, we explored alternative functions of moth sex pheromone compounds. These chemicals are generally produced in, and emitted from, dedicated sex pheromone glands, but some have recently also been found on the insects' legs. We identified and quantified the chemicals in leg extracts of the three heliothine moth species Chloridea (Heliothis) virescens, Chloridea (Heliothis) subflexa and Helicoverpa armigera, compared their chemical profiles and explored the biological function of pheromone compounds on moth legs. Identical pheromone compounds were present on the legs in both sexes of all three species, with no striking interspecies or intersex differences. Surprisingly, we also found pheromone-related acetate esters in leg extracts of species that lack acetate esters in their female sex pheromone. When we assessed gene expression levels in the leg tissue, we found known and putative pheromone-biosynthesis genes expressed, which suggests that moth legs may be additional sites of pheromone production. To determine possible additional roles of the pheromone compounds on legs, we explored whether these may act as oviposition-deterring signals, which does not seem to be the case. However, when we tested whether these chemicals have antimicrobial properties, we found that two pheromone compounds (16:Ald and 16:OH) reduce bacterial growth. Such an additional function of previously identified pheromone compounds likely coincides with additional selection pressures and, thus, should be considered in scenarios on the evolution of these signals.     

Multiple freshwater invasions of the tapertail anchovy (Clupeiformes: Engraulidae) of the Yangtze River

Freshwater fish evolved from anadromous ancestors can be found in almost all continents. The roles of paleogeographic events and nature selection in speciation process often are under focus of research. We studied genetic diversity of anadromous and resident tapertail anchovies (Coilia nasus species complex) in the Yangtze River Basin using 4,434 nuclear loci, and tested the history of freshwater invasion of C. nasus. We found that both C. brachygnathus and C. nasus were valid species, but the resident C. nasus taihuensis and the anadromous C. nasus were not different genetically based on Bayes factor species delimitation (BFD*). Maximum likelihood tree, Network, PCA and STRUCTURE analyses all corroborated the results of BFD*. Two independent freshwater invasion events of C. nasus were supported, with the first event occurring around 4.07 Ma and the second happened around 3.2 Ka. The time of the two freshwater invasions is consistent with different paleogeographic events. Estimation showed that gene flow was higher within ecotypes than between different ecotypes. F‐DIST analyses identified 120 disruptive outliers by comparing C. brachygnathus to anadromous C. nasus, and 21 disruptive outliers by comparing resident C. nasus to anadromous C. nasus. Nine outliers were found to be common between the two comparisons, indicating that independent freshwater invasion of C. nasus might involve similar molecular pathways. The results of this study suggest that adaptation to landlocked freshwater environment of migratory fish can evolve multiple times independently, and morphology of landlocked ecotypes may cause confusion in their taxonomy.     

Spatio-temporal pattern of schistosomiasis in Anhui Province,East China: Potential effect of the Yangtze River - Huaihe River Water Transfer Project

Anhui Province has been one of typical epidemic areas of schistosomiasis in East China as a wide range of large lake and marshland regions provide an ideal environment for growth and reproduction of the intermediate snail host. With the completion of the Yangtze River-Huaihe River Water Transfer Project (YHWTP), launched by the end of 2016, the epidemic areas are expected to expand and controlling schistosomiasis remains a challenge. Based on annual surveillance data at the county level in Anhui for the period 2006–2015, spatial and temporal cluster analyses were conducted to assess the pattern of risk through spatial (Local Moran's I and flexible scan statistic) and space-time scan statistic (Kulldorff). It was found that schistosomiasis sero-prevalence was dramatically reduced and maintained at a low level. Cluster results showed that spatial extent of schistosomiasis contracted, but snail distribution remained geographically stable across the study area. Clusters, both for schistosomiasis and snail presence, were common along the Yangtze River. Considering the effect of the ongoing YHWTP on the potential spread of schistosomiasis, Zongyang County and Anqing, which will be transected by the new water-transfer route, should be given a priority for strengthened surveillance and control. Attention should also be paid to Guichi since it is close to one of the planned inlets of the YHWTP.     

犁头鳅属鱼类物种地理分化过程

犁头鳅属为中国的特有属,包括犁头鳅和长鳍犁头鳅两个物种,犁头鳅广泛分布于长江中上游,而长鳍犁头鳅则局限分布于闽江水系。本研究对采自长江中上游的犁头鳅20个个体和闽江水系的长鳍犁头鳅8个个体的线粒体细胞色素b（cyt b）基因序列进行分析,以期对犁头鳅属鱼类的物种地理分化过程进行研究。结果显示,犁头鳅不同单倍型之间的遗传变异水平为0.1%—1.8％,平均为0.7%;长鳍犁头鳅各单倍型之间的遗传变异水平为0.6%—1.3%,平均为0.7%;犁头鳅和长鳍犁头鳅单倍型之间的遗传差异也较小,仅为0.2%—1.8%,平均为0.9%。采用邻接(NJ)法和贝叶斯(BI)法构建的分子系统发育树一致显示,该研究中的犁头鳅属鱼类构成一个单系;所有长鳍犁头鳅样本构成一个单系,位于系统发育树的顶部位置;犁头鳅的样本不构成单系,而是形成并系。从形态上看,犁头鳅和长鳍犁头鳅均为有效种。由此推测,在第四纪冰期,长江中下游的犁头鳅沿东海大陆架向南扩散到东南沿海水系,长鳍犁头鳅可能是犁头鳅的一个种群扩散到闽江水系后,由于适应新的环境条件而分化成的一个新物种,剩下的长江流域的犁头鳅种群则构成一个并系类群。本文对于类似的地理物种形成方式也进行了讨论。     

Geological events play a larger role than Pleistocene climatic fluctuations in driving the genetic structure of Quasipaa boulengeri (Anura: Dicroglossidae)

Paleoclimatic and paleogeological events have been identified as being the two main drivers of genetic structuring in extant organisms. We used a montane stream‐dwelling frog, Quasipaa boulengeri, to explore the relative roles played by these drivers on species in southern China, a region needing thorough studies. We detected four major matrilines, and no broadly distributed haplotypes occurred. The complex orogenesis of south‐western China drove matrilineal divergence in Q. boulengeri into highly structured geographical units. These matrilines subsequently persisted in situ with stable populations rather than undergoing expansions during glacial cycling. The unification of the upper and middle Yangtze River in the Three Gorges mountain region mediated downstream colonization of this frog. Analyses identified geological events as playing a larger role than climatic fluctuations in driving the population history of Q. boulengeri. Nuclear allele analyses indicated gene flow; this maintained genetic cohesion of the species. South‐eastern Sichuan Basin was identified as the area of secondary contact for several matrilines, and this area deserves further study and special protection.