Trepostome bryozoans from the Zahořany Formation (Upper Ordovician) of Loděnice,Prague Basin,Czech Republic

Three trepostome bryozoan species are described from the Upper Ordovician Zaho?any Formation of Loděnice, Prague Basin, Czech Republic. One genus is new—Lodenicella gen. nov. One species is described in open nomenclature. The described fauna contains ramose colonies or ramose branched projections from encrusting tubular-shaped colonies which inhabited shallow environment with moderate wave energy and significant influx of clastic material.     

A Nereites ichnofacies from the Ordovician‐Silurian Welsh Basin

The sediments of the Ordovician‐Silurian succession of west Wales are interpreted as turbiditic sands with associated pelagic and hemi‐pelagic mudstones. The strata contain a trace fossil assemblage consisting of fifteen ichnogenera, namely: Chondrites, Circulichnis, Cochlichnus, Cosmorhaphe, Desmograpton, Gordia, Helminthoida, Helminthopsis, Neonereites, Nereites, Paleodictyon, Palaeophycus, Planolites, Protopaleodictyon and Spirophycus. The ichnofaunal assemblage is typical of the Nereites ichnofacies. Twenty three ichno‐species are described, two of which (Helminthoida granulata, Palaeophycus serratus) are new. Turbiditic sands contain the most abundant and diverse ichnoassemblages, a reflection of favorable environmental conditions for habitation by benthic organisms. Both the turbiditic mudstones and anoxic hemipelagites contain just two ichno‐species, namely Chondrites ichnosp. and Planolites montanus both of which are common, albeit less so in the latter facies. The effects of preservation potential, medium and preservation mechanisms are also important controls on distribution.     

The first specimen of Archaeopteryx from the Upper Jurassic Mörnsheim Formation of Germany

From an initial isolated position as the oldest evolutionary prototype of a bird, Archaeopteryx has, as a result of recent fossil discoveries, become embedded in a rich phylogenetic context of both more and less crownward stem-group birds. This has prompted debate over whether Archaeopteryx is simply a convergently bird-like non-avialan theropod. Here we show, using the first synchrotron microtomographic examination of the genus, that the eighth or Daiting specimen of Archaeopteryx possesses a character suite that robustly constrains it as a basal avialan (primitive bird). The specimen, which comes from the Mörnsheim Formation and is thus younger than the other specimens from the underlying Solnhofen Formation, is distinctive enough to merit designation as a new species, Archaeopteryx albersdoerferi sp. nov., but is recovered in close phylogenetic proximity to Archaeopteryx lithographica. Skeletal innovations of the Daiting specimen, such as fusion and pneumatization of the cranial bones, well vascularized pectoral girdle and wing elements, and a reinforced configuration of carpals and metacarpals, suggest that it may have had more characters seen in flying birds than the older Archaeopteryx lithographica. These innovations appear to be convergent on those of more crownward avialans, suggesting that Bavarian archaeopterygids independently acquired increasingly bird-like traits over time. Such mosaic evolution and iterative exploration of adaptive space may be typical for major functional transitions like the origin of flight.     

Macroscopic plant remains from the base of the Ust’-Pinega formation (Upper Vendian of the Arkhangelsk Region)

Plant macrofossil remains from the Lyamtsa and Arkhangelsk beds of the Ust’-Pinega Formation (Vendian) are reported for the first time. Three new taxa of vendotaenid algae showing cellular parenchymatous morphology are described: Archyfasma lamellata sp. nov., Favosiphycus wukii gen. et sp. nov., and Gandvikia caudata gen. et sp. nov. Phytostratigraphic characteristics allow the author to correlate the deposits under study with the base of the Mogilev Formation (Vendian of Podolia). A distinctive Lower Redkino vendotaenid flora is described for the first time. It is shown to precede the Upper Redkino Eoholynialen flora.     

Redescription of the largest trigonotarbid arachnid —Kreischeria wiedei Geinitz 1882 from the Upper Carboniferous of Zwickau, Germany

Kreischeria wiedei Geinitz 1882 (Arachnida: Trigonotarbida) from the Upper Carboniferous (Westphalian D) of Zwickau, Germany is redescribed. The family KreischeriidaeHaase 1890 is reinstated and rediagnosed to accomodate this species. We provisionally refer the speciesAnzinia thevenini (Pruvost 1919),Gondwanarachne argentinensis Pinto &Hünicken 1980,Hemikreischeria geinitzi (Thévenin 1902),Pseudokreischeria pococki Gill 1924 andPseudokreischeria varia Petrunkevitch 1949 to Kreischeriidae too.     

A surface microrelief on the leaves of Glossophyllum florinii (?Ginkgoales) from the Upper Triassic of Lunz,Austria

The cuticles of many extant seed plants display distinct surface microreliefs, which represent adaptations to certain habitat conditions or mechanical defences against herbivores and phytopathogenic microorganisms. Although microreliefs have variously been noted in fossil cuticles, hypotheses relating to the effectiveness of these structures in fossil plants have not been advanced to date. A surface microrelief composed of longitudinally orientated idiocuticular striae occurs on the leaves of the enigmatic Carnian (Late Triassic) gymnosperm (?ginkgophyte) Glossophyllum florinii Kräusel from the Northern Calcareous Alps of lower Austria. Most striae originate from the tips of the papillae on the stomatal subsidiary cells. The G. florinii surface microrelief may have (1) reduced leaf wettability, (2) produced or enhanced the self‐cleaning effect of the leaf, (3) prevented the formation of a water film on the leaf surface, and/or (4) mechanically stabilized the leaf. © 2007 The Linnean Society of London, Botanical Journal of the Linnean Society, 2007, 153 , 87–95.     

Description of Freshwater Bacterial Assemblages from the Upper Paraná River Floodpulse System,Brazil

Bacteria were identified from a large, seasonally flooded river (Paraná River, Brazil) and two floodplain habitats that were part of the same river system yet very different in nature: clearwater Garças Lagoon and the highly humic waters of Patos Lagoon. Bacterioplankton were collected during mid-summer (Jan. 2002) from water samples (2 l) filtered first through a 1.2-μm filter then a 0.2-μm membrane filter representing the particle-attached and free-living sub-communities, respectively. DNA was extracted from filters and purified and a 16S rRNA clone library established for each habitat. Over 300 clones were sequenced and checked for similarity to existing 16S sequences in GenBank using the BLAST algorithm with default parameters. Further classification of clones was done using a species “backbone” attachment followed by parsimony analysis. The majority (85%) of sequences, referred to here as operational taxonomic units (OTUs), were most similar to uncultured bacterium 16S sequences. OTUs from each Proteobacteria sub-phylum (α, β, γ, δ, ?) were present in the Upper Paraná River system, as well as members of the Bacteroidetes. The microbial assemblage from Patos Lagoon was least like other samples in that it had no Firmicutes present and was dominated by Actinobacteria. Verrucomicrobia OTUs were only found in the free-living assemblage. This study documents the presence of globally distributed phyla in Upper Paraná River and taxa unique to habitat and particle attachment.     

Deep Endichnial Cruziana from the Lower-Middle Ordovician of Spain — A Unique Trace Fossil Record of Trilobitomorph Deep Burrowing Behavior

Full reliefs of Cruziana furcifera from the Lower-Middle Ordovician quartzite sandstone beds (Pochico Formation, southern Spain) points to deep, infaunal burrowing of trilobites. Some specimens show an unusual vertical extension with a wider lower part and a narrower upper part in cross section. They are referred to trilobites, which burrowed deeply in the sediment and were oriented obliquely head down and tail up. Deep burrowing seems to be common for other members of the Cruziana rugosa group, foremost C. rugosa and C. furcifera, less for C. goldfussi. The deep burrowing recorded in the discussed trace fossils can be referred to the earliest common infaunalization caused by trilobites and other arthropods during the Ordovician, probably in a response to a food competition on the sea floor, which promoted a behavioral plasticity within the same taxon or closely related taxa of trilobites.     

First mammal species identified from the Upper Cretaceous of the Rusca Montană Basin (Transylvania,Romania)

Multituberculate mammals are scarce in the Late Cretaceous of Europe, being recorded exclusively from the Maastrichtian terrestrial deposits of the Ha?eg and Transylvanian basins, in Romania. Moreover, they all belong to the endemic and primitive cimolodontan family Kogaionidae. Here, we report multituberculate teeth originating from the Maastrichtian fluviatile sediments of the Rusca Montan? Basin (Occidental Carpathians, Poiana Rusc? Mountains). This is the westernmost occurrence of these Cretaceous mammals in Romania. These teeth are assigned to Barbatodon oardaensis, the smallest Cretaceous kogaionid species. This study presents the first occurrence of this species outside the Metaliferi sedimentary area (southwestern Transylvania, Romania). The distribution of Romanian Maastrichtian kogaionids is also discussed.     

Mineralization of soft-part anatomy and invading microbes in the horseshoe crab Mesolimulus from the Upper Jurassic Lagerstätte of Nusplingen, Germany

A remarkable specimen of Mesolimulus from the Upper Jurassic (Kimmeridgian) of Nusplingen, Germany, preserves the musculature of the prosoma and associated microbes in three dimensions in calcium phosphate (apatite). The musculature of Mesolimulus conforms closely to that of modern horseshoe crabs. Associated with the muscles are patches of mineralized biofilm with spiral and coccoid forms. This discovery emphasizes the potential of soft-bodied fossils as a source for increasing our knowledge of the diversity of fossil microbes in particular settings.     

Upper Airways Microbiota in Antibiotic-Na?ve Wheezing and Healthy Infants from the Tropics of Rural Ecuador

Background

Observations that the airway microbiome is disturbed in asthma may be confounded by the widespread use of antibiotics and inhaled steroids. We have therefore examined the oropharyngeal microbiome in early onset wheezing infants from a rural area of tropical Ecuador where antibiotic usage is minimal and glucocorticoid usage is absent.

Materials and Methods

We performed pyrosequencing of amplicons of the polymorphic bacterial 16S rRNA gene from oropharyngeal samples from 24 infants with non-infectious early onset wheezing and 24 healthy controls (average age 10.2 months). We analyzed microbial community structure and differences between cases and controls by QIIME software.

Results

We obtained 76,627 high quality sequences classified into 182 operational taxonomic units (OTUs). Firmicutes was the most common and diverse phylum (71.22% of sequences) with Streptococcus being the most common genus (49.72%). Known pathogens were found significantly more often in cases of infantile wheeze compared to controls, exemplified by Haemophilus spp. (OR = 2.12, 95% Confidence Interval (CI) 1.82–2.47; P = 5.46×10⁻²³) and Staphylococcus spp. (OR = 124.1, 95%CI 59.0–261.2; P = 1.87×10⁻²⁴¹). Other OTUs were less common in cases than controls, notably Veillonella spp. (OR = 0.59, 95%CI = 0.56–0.62; P = 8.06×10⁻⁸⁶).

Discussion

The airway microbiota appeared to contain many more Streptococci than found in Western Europe and the USA. Comparisons between healthy and wheezing infants revealed a significant difference in several bacterial phylotypes that were not confounded by antibiotics or use of inhaled steroids. The increased prevalence of pathogens such as Haemophilus and Staphylococcus spp. in cases may contribute to wheezing illnesses in this age group.     

Shell Beds as paleoecological puzzles: A case study from the Upper Permian of the Paraná Basin, Brazil

Summary Microstratigraphic, sedimentological, and taphonomic features of the Ferraz Shell Bed, from the Upper Permian (Kazanian-Tatarian?) Corumbataí Formation of Rio Claro Region (the Paraná Basin, Brazil), indicate that the bed consists of four distinct microstratigraphic units. They include, from bottom to top, a lag concentration (Unit 1), a partly reworked storm deposit (Unit 2), a rapidly deposited sandstone unit with three thin horizons recording episodes of reworking (Unit 3), and a shell-rich horizon generated by reworking/winnowing that was subsequently buried by storm-induced obrution deposit (Unit 4). The bioclasts of the Ferraz Shell Bed represent exclusively bivalve mollusks.Pinzonellaillusa andTerraia aequilateralis are the dominant species. Taphonomic analysis indicates that mollusks are heavily time-averaged (except for some parts of Unit 3). Moreover, different species are time-averaged to a different degree (disharmonious time-averaging). The units differ statistically from one another in their taxonomic and ecological composition, in their taphonomic pattern, and in the size-frequency distributions of the two most common species. Other Permian shell beds of the Paraná Basin are simílar to the Ferraz Shell Bed in their faunal composition (they typically contain similar sets of 5 to 10 bivalve species) and in their taphonomic, sedimentologic, and microstratigraphic characteristics. However, rare shell beds that include 2–3 species only and are dominated by articulated shells preserved in life position also occur. Diversity levels in the Permian benthic associations of the Paraná Basin were very low, with the point diversity of 2–3 species and with the within-habitat and basin-wide (alpha and gamma) diversities of 10 species, at most. The Paraná Basin benthic communities may have thus been analogous to low-diversity bivalve-dominated associations of the present-day Baltic Sea. The ‘Ferraz-type’ shell beds of the Paraná Basin represent genetically complex and highly heterogeneous sources of paleontological data. They are cumulative records of spectra of benthic ecosystems time-averaged over long periods of time (10²–10⁴ years judging from actualistic research). Detailed biostratinomic reconstructions of shell beds can not only offer useful insights into their depositional histories, but may also allow paleoecologists to optimize their sampling designs, and consequently, refine paleoecological and paleoenvironmental interpretations.     

An unusual process structure in Tresarcus, a new acritarch genus from the Ordovician of Öland, Sweden

Tresarcus, a new monospecific acritarch genus, is established along with the type-species Tresarcus suecicus sp. nov. It was found in samples from the upper Arenig (Lenodus sp. A conodont Zone) of the Hagudden and Horns Udde sections, ?land, Sweden. The three-arched process tip is a peculiar characteristic of Tresarcus. This structure recalls, from a morphological point of view (though at a different dimensional scale), the four-arched termination of the epidermal hairs that ornate the adaxial (upper) surface of the assimilating leaves of Salvinia natans, Adanson, 1785 (Pteridophyta). This species has an aquatic habit and the four-arched structure as the tip of the epidermal is interpreted as a device that favours buoyancy by trapping air on the leaf surface. A similar function is hypothesized for the three-arched processes of Tresarcus.     

Chitinozoan zonation of the Late Ordovician and the Early Silurian of the island of Anticosti, Québec, Canada

A reappraisal of chitinozoan distribution across the Ordovician-Silurian boundary on the Island of Anticosti has led to the recognition of a new zone, the Ancyrochitina ellisbayensis biozone, in the uppermost part of the Ellis Bay Formation. This biozone lies between the well defined Upper Ordovician Spinachitina taugourdeaui biozone and the lowest Silurian (Rhuddanian) Plectochitina nodifera biozone of the Becscie Formation. The occurrence of such diagnostic species as P. nodifera, Belonechitina postrobusta, Conochitina electa and Ancyrochitina ramosaspina in the Lower Silurian of Anticosti points to a close similarity to faunas in Estonia and north Latvia and indicates an age ranging from the Parakidograptus acuminatus to the Coronograptus cyphus in terms of graptolite zones. The chitinozoan biozonation harmonizes with that based on conodonts and, to a lesser extent, with the known graptolite faunal succession. Five new species: Ancyrochitina ellisbayensis sp. nov., Clathrochitina postconcinna sp. nov., Conochitina gunriveris sp. nov., Clathrochitina perexilis sp. nov., Bursachitina basiconcava sp. nov. and three species in open nomenclature are described.     

Small Celastraceae and Polygonaceae twigs from the Upper Cenozoic (Ituzaingó Formation) of the La Plata Basin,Argentina

Two new wood types from the Late Cenozoic of the Ituzaingó Formation, La Plata Basin, Northeast Argentina add to our knowledge of South American Cenozoic plants. The materials were preserved by siliceous cellular permineralization, and they were prepared for microscopic examination by surface polishing and in thin sections. The anatomy of these new species was described. The relationship and comparison with the nearest living relatives (NLRs) are discussed. Maytenoxylon perforatum Franco gen. and sp. nov. is described as the first fossil wood referable to Celastraceae from South America. This new fossil species is related to extant Maytenus Molina. The other fossil twig, Ruprechtioxylon breae Franco sp. nov., has features of the Polygonaceae family and particularly resembles the extant specie Ruprechtia laxiflora Meisn. The occurrence of these fossil woods in south-eastern South America suggests that a relatively warm and dry to seasonally dry climate prevailed over this region of Gondwana during the Upper Cenozoic. It also provides new evidence for the hypothesis of the more wide distribution of Seasonally Dry Tropical Forest (SDTF) during the Upper Cenozoic.     

“Lycostrobus” chinleana,an equisetalean cone from the Upper Triassic of the southwestern United States and its phylogenetic implications

Detailed study of the cone Lycostrobus chinleana Daugherty shows that the fossil was incorrectly attributed to the Lycopodiales by the author and to the quillworts by Retallack and that it actually should be assigned to the Equisetales. The cone, which occurs in the Upper Triassic Chinle Formation at several localities in the southwestern United States, is ∼2.5 cm wide and nearly 6 cm long and consists of a stout axis bearing whorls of peltate sporangiophores. Each sporangiophore is composed of a slender stalk and a hexagonal disk, which typically bears a single, generally long, lanceolate, forward-directed leaf-like umbo tip on the outer surface and several recurrent sporangia on the inner surface. Small round to oval trilete spores occur in the sporangia. Since the leaf-like umbo tip is similar to the sterile leaves found in certain calamite cones and the recurrent sporangia are equisetalean-like, it appears that the cone may represent a intermediate stage between Calamites and modern Equisetum. According to this hypothesis, the nonbracteate Equisetum cone could have developed from a bracteate calamite cone, through reduction and fusion of the bracts and the sporangiophores, rather than by the loss of whorls of bracts of the Calamites cone as suggested earlier by others. As a result of this study the cone is assigned to the new Equisetalean genus Equicalastrobus and redescribed under the name E. chinleana (Daugherty) Grauvogel-Stamm and Ash, n. comb.     

A new basal testudinoid turtle (Testudinoidea: “Lindholmemydidae”) from the Upper Paleocene of Mongolia

A new genus and species of a basal testudinoid turtle of the family “Lindholmemydidae,” Paramongolemys khosatzkyi gen. et sp. nov., is described based on shell material from the Naranbulak Formation (Upper Paleocene) of the Naran Bulak and Khaychin-Ula IE localities (Mongolia). Material of this species includes some specimens previously described as Mongolemys tatarinovi.     

Mechanics of sculpture formation in Magadiceramus? rangatira rangatira (Inoceramidae,Bivalvia) from the Upper Cretaceous of New Zealand

The surface sculpture of the inoceramid bivalve Magadiceramus? rangatira rangatira consists of commarginal ribs and curious, transverse wrinkles. The wrinkles typically are at a high angle or orthogonal to the shell margin (‘antimarginal’) and thus differ from purely radial structures. They show features of distribution and morphology that reveal them to be products of margin‐parallel compression of the shell‐secreting mantle and its adjacent, flexible, uncalcified periostracum. The interaction of wrinkles with commarginal ribs indicates that the ribs also formed as folds of the mantle margin. During growth, commarginal folding caused withdrawal of the entire mantle margin towards the umbo, with a consequent reduction in perimeter length. Measurement of specimens indicates that fabrication of the commarginal ribs resulted in the magnitude of commarginal shortening that is required for the formation of transverse wrinkles. We infer that early in ontogeny, at the first development of these sculptures, the wrinkles resulted entirely from mantle contraction and resultant commarginal shortening. With subsequent growth, total wrinkling included a component of ‘pre‐wrinkling’ inherited from the preceding growth stage; the contribution of pre‐wrinkling to total wrinkling increased with shell size. The proposed mechanical model is two‐phase. First, the transversely corrugated (pre‐wrinkled) mantle and periostracum advanced and secreted a slightly concave growth increment. Secondly, the mantle subsequently contracted to create a commarginal rib and increase the number and amplitude of transverse wrinkles. This model is consistent with a homogeneous mantle lacking any differentiated and specialized rib‐constructing segments.     

What is Geosaurus? Redescription of Geosaurus giganteus (Thalattosuchia: Metriorhynchidae) from the Upper Jurassic of Bayern,Germany

The holotype and referred specimens of Geosaurus giganteus, a metriorhynchid crocodile from the Tithonian (Upper Jurassic) of Germany, is redescribed, along with a historical overview of the genus and species. This taxon is unique among metriorhynchids as its serrated, strongly lateromedially compressed dentition is arranged as opposing blades, suggesting it was adapted to efficiently slice through fleshy prey. A new phylogenetic analysis of Crocodylomorpha is presented, which finds G. giganteus to be nested within what is currently considered Dakosaurus, whereas the other species currently assigned to Geosaurus form a clade with Enaliosuchus and the holotype of Cricosaurus. The phyletic relationship of G. giganteus with other metriorhynchids indicates that the current definition of the genus Geosaurus is polyphyletic, and that the inclusion of subsequent longirostrine species to this genus is in error. The re‐analysis presented herein demonstrates Geosaurus to be composed of three species sensu stricto. The appropriate taxonomic amendments to the Metriorhynchidae are also provided. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 157 , 551–585.