Substrate specificity of the biotransformation enzymes in a Nocardia erythropolis culture

Substrate specificity of biotransformation enzymes of culture Nocardia erythropolis was studied. Products of transformation of cholesterol and three sterols of microbial origin: ergosterol, ergosta-5,7-dien-3 beta-ol and ergosta-7,22-dien-3 beta-ol was identified with a help of thin-layer chromatography, UV spectrophotometry and mass-spectrometry. It was established, that delta 22-bond in the side chains of sterols and delta 7-bond slows and delta 5-bond makes impossible cleavage of side chains of sterols.     

Linkage and Segregation of Unselected Markers in Matings of Nocardia erythropolis with Nocardia canicruria

The segregation of unselected genes expressing resistance or susceptibility to acriflavine, erythromycin, streptomycin, and tetracycline was analyzed in selected prototrophic recombinants resulting from matings of Nocardia erythropolis and N. canicruria. The organisms were shown to be functionally haploid and appeared to contain not more than one genome. It was postulated that all observed genes were present in a linear linkage group. The ordering of the genes in N. erythropolis was: tetB10 eryB9 his-3 purA1 acr-2 strA1 (respectively, resistance to tetracycline and erythromycin, deficiency for histidine and for purine, and resistance to acriflavine and streptomycin). The ordering of the genes in N. canicruria was: purB2 tetA9 eryA7 acr-11 strB2 (respectively, deficiency for purine, and resistance to tetracycline, erythromycin, acriflavine, and streptomycin). Excluding the genes for acriflavine resistance, acr-2 and acr-11, resistance loci in N. erythropolis were not allelic to and showed lateral displacement from genes controlling phenotypically similar resistance in N. canicruria. Evidence for some lack of homology between N. erythropolis and N. canicruria genomes was found. Recombination phenomena between the nocardial species was postulated to occur as a result of formation of a heterogenomic zygote in which new combinations were produced. Production of selectable, haploid recombinants was ascribed to subsequent haploidization of the zygote.     

Surface-Active Lipids from Nocardia erythropolis Grown on Hydrocarbons

Nocardia erythropolis (ATCC 4277) was grown in a 28-liter fermentor on mineral salts medium and 4% hydrocarbon. Extraction of the neutral lipids with pentane removed approximately 90% of the surface activity of the culture medium. The residual surface activity of the culture medium was attributed to the polar lipid fraction which was not extracted with pentane. Analysis of the pentane extracts with thin-layer chromatography showed the presence of four major compounds. A fatty alcohol reached a maximum concentration in the early log phase of growth and then decreased to the end of the fermentation. A monoglyceride, an ester, and a fatty acid appeared during the log phase of growth and continued to increase until the end of the fermentation. The fatty acids isolated from the culture grown on hexadecane had a carbon skeleton with the same length as the substrate, with 70% of the component as the saturated acid and 30% as a monounsaturated homolog. When isolated from a kerosene culture, the fatty acids consisted of a number of homologs from C₁₈ to C₂₀, including branched-chain and unsaturated acids, reflecting the distribution of the branched-chain isomers in the substrate.     

Partial exclusion of the Nocardia erythropolis chromosome in nocardial recombinants

Segregation of genes specifying nutritional requirements and inhibitor resistance was analyzed in recombinants from crosses of Nocardia erythropolis with N. canicruria. With all employed characters as both selecting and nonselecting markers, a single linear linkage group was depicted with genes in the following order; leu-6 gly-4 purB2 tetA9 his-1 eryA7 strB2 ser-1 arg-1. The relative frequency of crossovers between gene pairs was found to decrease as the map is read from leu-6 to the right. The phenotype for arg-1 was found infrequently in recombinants. This fact, coupled with the observed decrease in crossover frequency dependent upon map position, suggested two alternative explanations to account for the observed results. (i) Zygote formation among these nocardiae is a consequence of partial, oriented chromosome transfer from N. erythropolis to N. canicruria and is similar to the mechanism of polar transfer reported in matings of Hfr by F⁻Escherichia coli. (ii) Being of diverse origin, the chromosomes of N. erythropolis and N. canicruria are not completely homologous, and decrease in crossover frequency dependent upon map position results from such chromosomal heterology. In this hypothesis, the infrequent occurrence of arg-1 among recombinants is considered to be an artifact resulting from the action of a previously unrecognized suppressor gene for arg-1 present in N. canicruria.     

Isolation and Characterization of a Lysogenic Strain of Nocardia erythropolis

A stable phage-carrying strain of Nocardia erythropolis was isolated from an infection with the nocardiophage phiEC. Growth of the strain in phage-specific antiserum for 48 hr produced cured organisms at a frequency of about 0.5%. Spontaneous curing, determined by serial single-colony isolations, was less than 0.4%. The strain could not be infected by phage phiEC nor by a closely related phage, phiC, although the cells were able to adsorb these phages. In cell populations, a frequency of 2.5 x 10(-4) cells spontaneously induced. The growth rate of the strain was comparable to that of the uninfected wild-type N. erythropolis. Ultraviolet irradiation or treatment with mitomycin C induced the strain to produce larger numbers of phage. It was concluded that the isolated strain was lysogenic.     

Purification and some properties of a phthalate ester hydrolyzing enzyme from Nocardia erythropolis

Summary A phthalate ester hydrolyzing enzyme has been purified from the culture broth of Nocardia erythropolis, a Gram-positive bacterium capable of degrading phthalate esters rapidly. The purified enzyme appeared homogeneous on polyacrylamide gel disc-electrophoresis, and its molecular weight was estimated to be about 15,000. The optimal pH and temperature were pH 8.6 and 42°C, respectively. The enzyme was stable in a pH range from 7.0 to 8.0 and below 30°C. The enzyme activity was stimulated by Ca²⁺ and taurocholate, but inhibited by several metals such as Hg²⁺. Most of the phthalate esters tested were hydrolyzed to phthalate and alcohols regardless of the type of side-chain. In addition, the enzyme rapidly hydrolyzed olive oil and tributyrin. This enzyme from N. erythropolis may be a novel type of lipase with broad substrate specificity.Microbial degradation of phthalate esters. Part X     

Removal of Phthalate Esters by Activated Sludge Inoculated with a Strain of Nocardia erythropolis

Phthalate esters, such as di-2-ethyl hexyl phthalate (DEHP) and di-n-butyl phthalate (DBP), were efficiently removed from wastewater by inoculating viable cells of Nocardia erythropolis, a bacterium capable of rapidly degrading phthalate esters, in activated sludge. When the wastewater containing 1500 ppm of DEHP was treated with the activated sludge inoculated with Nocardia erythropolis, the DEHP was found to be removed at a rate of 98.2% in 1 day and to be gas-chromatographically free on and after the 3rd day. Activated sludges, in particular, when high concentration of substances was used, were efficiently prevented from deflocculation of sludge by inoculation of Nocardia erythropolis, and moreover, the deflocked sludge was restored and recovered by the addition of Nocardia erythropolis.     

Limiting Nutrients During Mating as a Means of Increasing Recombinant Recovery in Crosses of Nocardia erythropolis

Minimal medium supplemented with sub-optimal levels of parental auxotrophic requirements increases recombinant recovery from matings of Nocardia erythropolis more than 500-fold when compared with nutrient agar matings.     

Analysis of the products of ergosta-7,22-dien-3-beta-ol biotransformation by a Nocardia erythropolis culture

The products of biotransformation by Nocardia erythropolis-402 of the microbial sterol ergosta-7,22-dien-3 beta-ol isolated from a Saccharomyces cerevisiae mutant were studied. The products were identified as ergosta-7,22-dien-3-one and ergosta-7,22-dien-17 alpha-ol-3-one by thin-layer chromatography, UV-spectrophotometry and mass-spectroscopy. It was found that the existence of 7-8 double bond slowed down the cleavage of the sterol side chain. The absence of 5-6 double bond prevents the formation of delta 4-3-ketosystem of coupled bonds.     

Enzymes of the autotrophic pathway in mating partners and transconjugants of Nocardia opaca 1 b and Rhodococcus erythropolis

Enzyme activities have been measured in the partners of a bacterial mating system consisting of the hydrogen autotroph Nocardia opaca (donor and Aut^- recipient), the heterotroph Rhodococcus erythropolis (recipient) and intra- and interspecies transconjugants after growth on fructose, pyruvate and under autotrophic conditions. Specific activities of each of the enzymes hydrogenase, phosphoribulokinase and ribulosebisphosphate carboxylase were high in autotrophically grown cells of the donor and the transconjugants: they amounted to only 10% after growth on pyruvate. The recipient cells did not grow autotrophically and the enzymes mentioned were not detectable even after growth on pyruvate. Other enzymes of the Calvin cycle were constitutively formed in all strains examined.The properties of hydrogenase (K _m for NAD, R_f in gel electrophoresis) and of ribulosebisphosphate carboxylase (K _m for RuBP and R_f) were the same in the donor and transconjugant cells. The properties of glucose-6-phosphate dehydrogenase (K _m for G-6-P and mode of inhibition by ATP and phosphoenolpyruvate) were the same in the recipient and the interspecies transconjugant cells and differed from those of the donor cells. The curves of growth under autotrophic conditions in batch culture of the donor and interspecies transconjugant were almost congruent. The specific activities of hydrogenase, phosphoribulokinase and ribulosebisphosphate carboxylase increased from 40% at the beginning to 100% at the end of the exponential growth phase; these enzymes were under coordinate control.The results are in accordance with genetic studies: the genetic information for autotrophic growth is localized on a so far unidentified genetic element and is transferred en bloc from N. opaca to Aut^- mutants of the same strain or to recipient bacteria such as R. erythropolis; expression in the wild type and transconjugant cells is the same.Abbreviations G-6-P glucose-6-phosphate - 6-PG 6-phosphogluconate - FBP fructose-1,6-bisphosphate - SBP sedoheptulose-1,7-bisphosphate - RuBP ribulose-1,5-bisphosphate     

Regulation of Rubidium Uptake in Sunflower Roots

Uptake of Rb⁺ was investigated in 12-day-old intact plants of sunflower (Helianthus annum L. var. californicus) which had been cultivated or pretreated in nutrient solutions with various K⁺ concentrations. The relationship between Rb⁺ influx and K⁺ concentration of the roots indicated regulation of Rb⁺ uptake by allosteric inhibition of the uptake mechanism. A constant passive influx occurred contemporaneously with the active uptake as shown by experiments at 0°C or with 2,4-dinitrophenol. The allosteric regulation of ion carrier activity occurred after a time lag of up to 1 h after the change of external solution. In experiments involving Rb⁺ treatments of K⁺-deficient plants, the synthesis of carriers for transport of Rb⁺ could be demonstrated. A model including allosteric regulation of Rb⁺ uptake in roots is discussed.     

Allosteric Regulation of Potassium Uptake in Plant Roots

In uptake experiments from nutrient solutions containing 2.0 mM K⁺ labelled with ⁸⁶Rb⁺, the relationship between potassium uptake efficiency and internal potassium concentration of the roots, [K⁺]_i was found to be partly sigmoidal for intact plants of spring wheat (Triticum aestivum L.), glasshouse cucumber (Cucumis sativus L.), birch (Betula verrucosa Ehrh.), lingonberry (Vaccinium vitis-idaea L.), Scots pine (Pinus silvestris L.) and Norway spruce (Picea abies (L.) Karst.), The results were interpreted in terms of sigmoidal enzyme kinetics for allosteric regulation. Hill plots of the data gave straight lines at specific [K⁺]_i intervals for the species. The slopes of the lines are the Hill coefficient, which could be regarded as a measure of the minimal number of allosteric sites. The Hill coefficient varied between - 14.4 and - 15.9. When divided by four, these values are fairly consistent with those in the literature. It is suggested that four active uptake sites interact with four groups of allosteric sites, each group containing four such sites, or that one active uptake site interacts with all the allosteric sites. Thus the results are evidence that the mechanism regulating K⁺ uptake is basically similar for the investigated plants. It is the interval of [K⁺]_i mediating highly negatively cooperative allosteric regulation that differs among species. For some of the species, n decreased from about 15 and approached unity at high [K⁺]_i values. This may indicate that only few sites are still available, making cooperativity unimportant. Alternatively high vacuolar [K⁺]_i concentrations may give rise to an incorrect evaluation of data from Hill plots, since the cytoplasmic K⁺ content likely regulates the allosteric mechanism. Moreover, it is suggested that gene-controlled carrier synthesis is responsible for the varying maximum K⁺ uptake efficiency among species.     

Kinetics of Growth and Substrate Uptake in a Biological Film System

The rates of growth and substrate uptake in a biological film continuous-flow reactor were studied. The experiments were performed with high fluid velocities to bring the reactor operation to the reaction-controlled regime, thus avoiding external diffusional resistances. The glucose uptake experiments were performed with small film thicknesses so that full substrate penetration within the entire film thickness could be obtained. In this way, the catalyst effectiveness factor was 1.0 and the observed rate was the true, or intrinsic, rate. The results of the experiments indicate that both the intrinsic rate of substrate uptake and the rate of film growth are independent of the substrate concentration remaining in the reactor (zero-order reactions). However, the value of the initial substrate concentration when the film is in the early stages of growth defines the magnitude of both the rate of uptake and growth. This effect of the initial substrate concentration follows a saturation-function pattern.     

植物铁吸收、转运和调控的分子机制研究进展

铁是植物正常生命活动所必需的微量矿质元素, 铁离子的吸收、转运和利用是一个复杂的过程, 很多基因参与了这一过程。本文对近10年来发现和分离的参与植物铁吸收、转运及调控的基因研究进展进行了综述。根据最近的研究结果, 提出了植物控制铁吸收的分子调控模式(机理I)。     

Substrate Uptake and Subcellular Compartmentation of Anoxic Cholesterol Catabolism in Sterolibacterium denitrificans

Cholesterol catabolism by actinobacteria has been extensively studied. In contrast, the uptake and catabolism of cholesterol by Gram-negative species are poorly understood. Here, we investigated microbial cholesterol catabolism at the subcellular level. ¹³C metabolomic analysis revealed that anaerobically grown Sterolibacterium denitrificans, a β-proteobacterium, adopts an oxygenase-independent pathway to degrade cholesterol. S. denitrificans cells did not produce biosurfactants upon growth on cholesterol and exhibited high cell surface hydrophobicity. Moreover, S. denitrificans did not produce extracellular catabolic enzymes to transform cholesterol. Accordingly, S. denitrificans accessed cholesterol by direction adhesion. Cholesterol is imported through the outer membrane via a putative FadL-like transport system, which is induced by neutral sterols. The outer membrane steroid transporter is able to selectively import various C₂₇ sterols into the periplasm. S. denitrificans spheroplasts exhibited a significantly higher efficiency in cholest-4-en-3-one-26-oic acid uptake than in cholesterol uptake. We separated S. denitrificans proteins into four fractions, namely the outer membrane, periplasm, inner membrane, and cytoplasm, and we observed the individual catabolic reactions within them. Our data indicated that, in the periplasm, various periplasmic and peripheral membrane enzymes transform cholesterol into cholest-4-en-3-one-26-oic acid. The C₂₇ acidic steroid is then transported into the cytoplasm, in which side-chain degradation and the subsequent sterane cleavage occur. This study sheds light into microbial cholesterol metabolism under anoxic conditions.