Factors Affecting Macroinvertebrate Richness and Diversity in Portuguese Streams: a Two‐Scale Analysis

We analysed the spatial patterns in macroinvertebrate taxon richness and abundance at two scales: sampling unit and basin. We sampled 12 stream sites in three zones of Portugal, differing in climate geomorphology and water chemistry. At a sampling unit scale, substratum organic matter content, depth and the dominant size of substratum particles were correlated with numbers of taxa and individuals. We propose that the number of taxa at a small scale depends on the number of individuals, which in turn is the result of organic matter accumulation, hydrologic and substratum characteristics. The environmental parameters better explaining the large‐scale biological data were temperature, minimum size of substratum particles and pH. Regardless of the relative importance of variable types and mechanisms regulating stream invertebrates along the climatic gradient, rivers from the North and Centre appeared to be richer in taxa than the typically Mediterranean streams in the South.     

AN INVESTIGATION OF DISTRIBUTIONAL PATTERNS IN THE DIATOM FLORA OF NETARTS BAY,OREGON, BY CORRESPONDENCE ANALYSIS1

Distributional patterns in assemblages of epiphytic and sediment-associated diatoms were investigated in Netarts Bay, Oregon. The method of reciprocal averaging revealed a floristic discontinuity between the epiphytic and sediment samples in ordination space. The basis for this discontinuity was the presence of a large number of sediment-associated taxa that were either very rare or not observed in the epiphytic samples. Within the sediment samples, the diatom flora formed a distributional continuum which had relatively high correlations with mean grain size, a sediment sorting coefficient, and the organic matter content of the sediment. A comparison of the flora in Netarts Bay with floras in other Oregon estuaries indicates that epiphytic, epilithic, and sediment-associated diatom assemblages do not exhibit conspicuous latitudinal changes along the coast of Oregon, and that many of the same taxa can be expected to occur in samples from comparable habitats in estuaries throughout the temperate regions of the world.     

Comparisons among colonization of artificial substratum types and natural substratum by benthic macroinvertebrates

A field study was designed to concurrently evaluate differences in colonization by benthic macroinvertebrates on a range of artificial substratum types (single particles of natural rock or clay brick and baskets of natural substratum) after three colonization periods (1, 8 and 29 days). Fauna on the artificial substrata were compared to natural substratum and the effect of natural epilithic cover on colonization by zoobenthos was determined. Densities of total number of organisms and the seven most abundant taxa, total number of taxa and quantity of organic material were greater on the natural substratum than on the artificial substratum types. Relative abundances of taxa on pairs of the artificial substratum types, unlike pairs of each artificial substratum type and the natural substratum, were statistically correlated. Among the artificial substratum types densities of total number of organisms and about one-half of the most abundant taxa, total number of taxa and quantity of organic material were greatest in the substratum baskets. Natural epilithic cover on the single rock particles and substratum baskets affected the densities of total number of organisms and two of the seven most abundant taxa. These taxonomic groups were at approximately two to six-fold greater densities on the substrata with fine sediment. consistent patterns in densities of the zoobenthos on the substrata were found after each colonization period. In our study all measures of the macroinvertebrate assemblages (densities of each taxon, total number of organisms, total number of taxa and relative abundances of taxa), with few exceptions, were different between each artificial substratum type and natural substratum. This result showed the abundance and composition of the macroinvertebrate fauna on artificial substratum types were different from the natural substratum. Therefore, the choice of using artificial substrata instead of direct sampling of the natural substratum should be carefully made. Among the artificial substratum types relative abundances of taxa were similar on the single substratum particles and substratum baskets indicating single particles instead of baskets might be used to sample the zoobenthos. Investigators should consider the potential effect of the natural epilithic cover of substratum particles on colonization by zoobenthos when choosing the type of artificial substratum.     

Spatial and inter-annual variability of the macrobenthic communities within a coastal lagoon (Óbidos lagoon) and its relationship with environmental parameters

The present work aims to analyse spatial and inter-annual variability in the benthic environment within the Óbidos lagoon, assessing the relationships between environmental characteristics and macrobenthic distribution patterns. Sediment samples were collected in February 2001 and 2002 for the study of macrofauna and biogeochemical parameters (sediment grain size, organic matter, organic carbon, chlorophyll a, and phaeopigments). Comparing 2001 to 2002, a general increase in the number of species, diversity and equitability indices was observed throughout the study area. Likewise, there was an increase of phytopigments and organic matter contents in the upper sediment layer. Based on the macrobenthic community patterns and environmental variables three main areas could be distinguished in both years: an outer area near the inlet mostly influenced by the sea, with very depressed number of species and abundance, and dominated by Saccocirrus papillocercus, Lekanesphaera levii, Microphthalmus similis and Nephtys cirrosa; an intermediate area located in the central part of the lagoon characterized by sandy sediment and low organic carbon, and colonized by a high diverse community with Hydrobia ulvae, Cerastoderma edule and Abra ovata as the most characteristic species; and the innermost area of the lagoon with muddy enriched sediments dominated by Heteromastus filiformis, oligochaetes, Scrobicularia plana, Cyathura carinata, Corophium acherusicum, phoronids, insect larvae and Corbula gibba. Deposit-feeders were dominant in the muddy sediments from the inner area, where suspension-feeders were also abundant. Carnivores were associated with clean sandy sediments from the inlet area and herbivores were more abundant within the central area.     

The Influence of Dry-season Conditions on the Bottom Dwelling Fauna of an East Australian Sub-tropical Estuary

Spatial patterns in benthic infaunal community structure of Port Curtis estuary (north-eastern Australia) were determined from quantitative grab samples and examined in relation to environmental variables. A total of 149 riverine, estuarine and open coastal stations were sampled during the winter survey, and 5744 individuals from 466 species identified. Filter-feeding organisms (primarily polychaetes, molluscs and crustaceans) dominated the benthos, and accounted for 50% of the total species abundance and 30% of the total species richness. Most taxa were uncommon, and 98% of species individually represented less than 2% of the total abundance. Distributional patterns in total species richness and abundance were highly correlated, and both parameters varied significantly with sediment grain size. Numbers of species and individuals were typically highest in coarse-sand and gravel sediments, and were lowest in fine, well-sorted, sands. Cluster analysis of species abundance data revealed nine community groupings characterised by small species sub-sets with restricted distributions. These groupings were primarily related to sediment grain size, sediment organic carbon content, salinity and depth. Not all variation in community structure was explained by these environmental variables, and it is likely that other unmeasured factors play an important role in determining benthic faunal composition in the estuary.     

The biodiversity of the deep Southern Ocean benthos

Our knowledge of the biodiversity of the Southern Ocean (SO) deep benthos is scarce. In this review, we describe the general biodiversity patterns of meio-, macro- and megafaunal taxa, based on historical and recent expeditions, and against the background of the geological events and phylogenetic relationships that have influenced the biodiversity and evolution of the investigated taxa. The relationship of the fauna to environmental parameters, such as water depth, sediment type, food availability and carbonate solubility, as well as species interrelationships, probably have shaped present-day biodiversity patterns as much as evolution. However, different taxa exhibit different large-scale biodiversity and biogeographic patterns. Moreover, there is rarely any clear relationship of biodiversity pattern with depth, latitude or environmental parameters, such as sediment composition or grain size. Similarities and differences between the SO biodiversity and biodiversity of global oceans are outlined. The high percentage (often more than 90%) of new species in almost all taxa, as well as the high degree of endemism of many groups, may reflect undersampling of the area, and it is likely to decrease as more information is gathered about SO deep-sea biodiversity by future expeditions. Indeed, among certain taxa such as the Foraminifera, close links at the species level are already apparent between deep Weddell Sea faunas and those from similar depths in the North Atlantic and Arctic. With regard to the vertical zonation from the shelf edge into deep water, biodiversity patterns among some taxa in the SO might differ from those in other deep-sea areas, due to the deep Antarctic shelf and the evolution of eurybathy in many species, as well as to deep-water production that can fuel the SO deep sea with freshly produced organic matter derived not only from phytoplankton, but also from ice algae.     

The intertidal soft-bottom infaunal macrobenthos in three Basque estuaries (Gulf of Biscay): a feeding guild approach

Feeding types of the infaunal macrobenthos of the intertidal soft-bottom communities from the estuaries of La Arena, Plentzia and Gernika, along the Basque coast (Gulf of Biscay) were studied in relation to habitat conditions, characteristics of each estuary and seasonal variation. General feeding structure observed in La Arena estuary was different from the other estuaries: omnivores were dominant, both in number of species and individuals, while surface deposit-feeders were the main feeding group in Plentzia and Gernika both in the finest sediment communities and in the sandy ones. Subsurface deposit-feeders were abundant in Plentzia and Gernika but scarce in La Arena estuary. Feeding types were related to the environmental variables. Sandy sediment communities presented a more balanced proportion among different feeding types and showed higher values of feeding diversity; suspension-feeders and predators were abundant only in that communities. By estuaries, feeding diversity was higher in Gernika and lower in La Arena. Seasonal variation in feeding diversity was observed, explained by changes in density of certain feeding groups; a common pattern of variation was found in Gernika communities, with an increase in June and a decrease in September. Oscillation of this index in Plentzia and La Arena depended on the estuary and the different communities; nevertheless a decrease of feeding diversity in September was commonly observed. Finally, feeding structure observed in our estuaries was compared to those described in coastal areas with organic enriched sediments, in order to assess the degree of perturbation of the environment based on the relative dominance of a certain feeding type in the macrobenthos.     

Caractérisation des peuplements de macroinvertébrés benthiques à l’aide de la carte auto-organisatrice (SOM)

Macrobenthic organisms are much used nowadays as bio-indicators for their ability to reflect different disturbances of aquatic ecosystems. However, they have never been used to assess the ecological status of the lagoons of Benin. The current study aims at revealing the ecological state of the lagoon of Porto-Novo through the study of changes in the settlement of benthic organisms collected in this lagoon. The sampling was carried out from July 2007 to June 2009 on a frequency of four seasons of collection per year. The self-organizing map (SOM) of Kohonen has been used for various patterns of distribution of collected organisms. A discriminant analysis (AFD) has allowed the identification of the parameters that govern the patterns observed in this environment. Four groups of macrobenthic communities emerged that were well predicted (75%). The distribution of benthic macro invertebrates of this lagoon is therefore zonal, seasonal and discriminated by variables of mineralization and sediment grain size. The difference in taxonomic richness corresponds to environmental conditions of stations appearing more or less stable and highlighting a gradient of the stress on organisms. Places with unstable conditions are affected by human activities due to their proximity to homes that are enriched in organic matter. These places are full of polluted-tolerant species such as the Gastropods Potamididae, Cirratulidae Polychaetes, Diptera Chironomidae and Oligochaeta. The macrobenthic fauna, which is well differentiated in the groups, is then subjected to human disturbance.     

Psychrophilic prokaryote structural-functional relationships, biogeography and evolution within marine sediment.

Prokaryote diversity has been found to be surprisingly high in cold marine sediments with numerous clades detected spread throughout many phyla. Marine benthic sediment clades are largely ecotypically distinct and autochthonous. Since almost all marine sediment prokaryotic taxa have yet to be cultivated, functionality is currently overwhelmingly cryptic for most benthic prokaryotic taxa except those falling into specific lineages for which there is cultivation or detailed biogeochemical data. Multivariate statistical comparisons of 16S rRNA gene sequence and denaturing gradient gel electrophoresis (DGGE) data show distinct distribution patterns of prokaryotic communities in sediment layers. By comparison geographical differences and differences related to the physical texture and organic content seem to result in generally smaller differences.     

Differences in Sediment Organic Matter Composition and PAH Weathering between Non-Vegetated and Recently Vegetated Fuel Oiled Sediments

We examined polycyclic aromatic hydrocarbon (PAH) attenuation in contaminated field sediments after only 2 years of plant growth. We collected sediments from vegetated and non-vegetated areas at the Indiana Harbor Canal (IHC), an industrialized area with historic petroleum contamination of soils and sediments. PAH concentrations, PAH weathering indices, and organic matter composition in sediments colonized by Phragmites, cattails, or willow trees were compared to the same indices for non-vegetated sediments. We hypothesized that bulk sediment and humin fractions with measurable increases in plant organic matter content would show measurable changes to PAH attenuation as indicated by more weathered PAH diagnostic ratios or reduced PAH concentrations. Carbon-normalized PAH concentrations were lower in vegetated bulk sediments but higher in vegetated humin fractions relative to non-vegetated sediment fractions. Total organic carbon content was not indicative of more weathered N₃/P₂ ratios or reduced PAH concentrations in vegetated sediment fractions. More weathered N₃/P₂ ratios were observed with increased modern carbon (plant carbon) content of vegetated sediment fractions. Phragmites sediments contained more modern carbon (plant carbon) and more weathered PAH ratios [C₃-naphthalenes and C₂-phenanthrenes (N₃/P₂)] than willow, cattail, and non-vegetated sediments.     

Bionomy of Macrobenthic Molluscs in Evros Delta (North Aegean Sea)

The composition and distribution of the macrobenthic molluscs in Evros Delta (North Aegean Sea) were investigated by quantitative sampling. The molluscan distribution shows a zonation mainly related to the degree of “confinement”. Based on similarity in distribution among stations, 2 groups of species were distinguished. One group includes marine species (Tellina tenuis, Bittium reticulatum) found only in coastal stations and the second group is typical of estuarine species (Hydrobia acuta, Abra ovata and Cerastoderma glaucum) distributed in almost all stations. Spatial fluctuations of the 3 estuarine species reflect their preferences in the various parameters (“confinement”, salinity, grain size and organic matter of sediment). The most isolated stations support the highest values of total mollusc abundance and biomass.     

Burrowing,feeding, and spatial distribution of the school prawn Metapenaeus macleayi (Haswell) in the Hunter river region,Australia

The influence of the food content and the particle size of the substratum on the distribution and relative abundance of Metapenaeus macleayi (Haswell) has been investigated by periodic trawl sampling for prawns and laboratory studies of their food, feeding, and burrowing behaviour.M. macleayi are opportunistic omnivores; they pick up material from the bottom with their chelipeds and convey it to the mouthparts where edible matter is sorted and ingested. They burrow into the sediment with their pereopods and pleopods, and are usually totally buried beneath the surface. A respiratory water current enters a tube formed by the antennal scales and the antennules, flows over the gills and then out of the carapace; this current is regularly reversed with increased strength, presumably to carry away de-oxygenated water. The results of experiments on substratum preference with adequately nourished juveniles suggest that the particle size of the sediment is more important than the food in the substratum in determining the distribution; the apparent preference of juveniles for a fine sandy substratum both in the laboratory and in the natural habitat may be attributed to the minimum threshold velocity of the sand particles.Adults are most abundant in turbid coastal waters arising from estuarine discharge and here the size of the sediment particles appears to be less important than the food content of the substratum in determining the distribution. The mangrove and reed swamps in the Hunter region play an important rôle in the food requirements of juvenile and adult prawns.     

The role of sediment organic matter composition in larval habitat selection by the polychaete Capitella sp. I

The role of sediment organic matter composition in larval habitat selection by the polychaete Capitella sp. I was investigated using a still water multiple-choice experiment. Specifically, the following question was addressed: what are the roles of sediment labile organic compounds in larval habitat selection? A replicated Latin-square design was used to test larval preferences among sediments collected from five sites (TLC—Tung Lung Chau; VHE—Victoria Harbor east; VH—Victoria Harbor; VHW—Victoria Harbor west; PC—Peng Chau) in the vicinity of Victoria Harbor, Hong Kong. Although mean grain size was not different among sites, water content and the total organic matter were higher in VH Mud but were similar among other sites. Carbohydrate, lipid, and biopolymeric fractions followed the same trend. According to protein content, sites were ranked as: VH > VHW > TLC = VHE > PC. PC Mud had the highest carbohydrate/protein ratio, due to low concentration of protein. According to larval preference, sites were ranked as: TLC = VH = VHW = VHE > PC. Our study shows a precise relationship between sediment biochemical properties and larval habitat selection. Larvae tend to choose sediments with low carbohydrate/protein ratio. Results suggest that types of sediment organic matter may play more important role in the larval habitat selection process of Capitella sp. I than concentration of organic matter alone.     

Non-selective surface deposit feeding by the Zoophycos producers

The feeding mechanism of Zoophycos producers demonstrates non-selection by particle size or quality. The characteristic morphology and mode of Occurrence of Zoophycos and the presence of pellets with pyroclastic grains imply that the Zoophycos producers were surface deposit-feeders. They dwelt in a burrow within the sediment and ingested the grains with nutrient detritus on the sea floor around the burrow opening. Fecal pellets containing pyroclastic grains were compared with the overlying volcanic ash layers through the analyses of grain size and mineral composition based on samples from two horizons in the Upper Pliocene of Boso Peninsula, central Japan. Judging from the comparative analyses, no significant differences were found between the ash layer and the fecal pellets. This fact strongly suggests that the Zoophycos producers appear to indiscriminately ingest particles on the sediment surface. Environments of low nutrition input such as the deep sea, non-particle size and quality selection in Zoophycos producers may be the feeding strategy for the detritus-feeding burrow-dwellers. □ Zoophycos, surface deposit-feeding, Pliocene Shiramazu Formation, Boso peninsula, Japan.     

Organic matter distribution and retention along transects from hilltop to kettle hole within an agricultural landscape

In agricultural landscapes, the spatio-temporal distribution of organic matter (OM) varies greatly across landscape structures and soil types. We investigated patterns of organic carbon (OC) content, polyvalent cations, and isotopic values for specific OM fractions along transects spanning topographic positions from erosional to depositional areas, including aquatic sediments within a single kettle hole. We hypothesized different drivers exist at different scales. At the transect scale, we hypothesized (1) landscape form and land management to explain patterns of isotopic and OC content from different OM fractions. At the aggregate scale, (2) we expected different OM-mineral associations to explain stabilized OM. We also hypothesized, (3) that shallow sediment δ¹³C and δ¹⁵N of the kettle hole reflected different terrestrial sources. We found that distinct differences in the OM turnover rates existed between the fractions suggesting that different processes are affecting the transformation rates that are recorded in the isotopic composition patterns. Erosion along with plant productivity drive mineral-associated fractions over the transect, while microbial decomposition and slurry influence freely available and aggregated OM fractions. The type and magnitude of OM-mineral associations changed along the transect while binding OM of different decomposition status. OM in mineral-associated fractions in kettle hole sediments were derived from clay- and silt-sized particles from the field, whereas OM in freely available and aggregated fractions potentially originated from macrophytes. We conclude that kettle holes constitute important sinks for terrestrial OM across the landscape.     

The role of settlement in structuring a hard-substratum community in the deep sea

Larval settlement can play an important role in the structure of benthic communities in shallow-water habitats. Experimental studies of settlement and colonization in the deep sea, however, are few, and have concentrated exclusively on sedimentary habitats. Results are presented here from an in situ study designed to determine whether larval settlement patterns on a common, deep-sea hard substratum (manganese nodules) determine the subsequent structure of the epifaunal community. In a 7-wk deployment at a depth of 1240 m, settlement onto manganese nodules resting on the sediment in a relatively “low-flow” environment was significantly greater than onto nodules suspended in a “higher-flow” regime. After 2 yr, this difference in total number of individuals was no longer significant, but a new pattern in community composition emerged, which correlated to the presumed supply of paniculate food. Suspension-feeders dominated the elevated nodules (correlating to higher horizontal participate fluxes) and deposit-feeders dominated the nodules sitting on the sediment (correlating to higher particulate deposition). The faunal settlement patterns observed after 7 wk, therefore, appear to be altered by adult feeding requirements of the component species.     

乌梁素海沉积物中有机质和全氮含量分布特征

针对乌梁素海富营养化日趋严重和湿地面积逐渐萎缩,系统地研究了其生态环境地球化学效应.结果表明,乌梁素海表层沉积物中的全氮含量存在明显的经向和纬向分异特征;沉积物中全氮养分含量与有机质含量显著相关(r＞0.93);沉积物中C/N的平均值介于12.07～19.95之间,表明有机质主要来源于湖中水生植物,水体富营养化具有显著的内源性.TN和有机质在不同粒级表层沉积物中的粒度效应明显,且TN和有机质在IV粒级的含量分别为I粒级的3.1～7.6倍和2.5～8.0倍.     

Complex, dynamic combination of physical, chemical and nutritional variables controls spatio-temporal variation of sandy beach community structure

Sandy beach ecological theory states that physical features of the beach control macrobenthic community structure on all but the most dissipative beaches. However, few studies have simultaneously evaluated the relative importance of physical, chemical and biological factors as potential explanatory variables for meso-scale spatio-temporal patterns of intertidal community structure in these systems. Here, we investigate macroinfaunal community structure of a micro-tidal sandy beach that is located on an oligotrophic subtropical coast and is influenced by seasonal estuarine input. We repeatedly sampled biological and environmental variables at a series of beach transects arranged at increasing distances from the estuary mouth. Sampling took place over a period of five months, corresponding with the transition between the dry and wet season. This allowed assessment of biological-physical relationships across chemical and nutritional gradients associated with a range of estuarine inputs. Physical, chemical, and biological response variables, as well as measures of community structure, showed significant spatio-temporal patterns. In general, bivariate relationships between biological and environmental variables were rare and weak. However, multivariate correlation approaches identified a variety of environmental variables (i.e., sampling session, the C∶N ratio of particulate organic matter, dissolved inorganic nutrient concentrations, various size fractions of photopigment concentrations, salinity and, to a lesser extent, beach width and sediment kurtosis) that either alone or combined provided significant explanatory power for spatio-temporal patterns of macroinfaunal community structure. Overall, these results showed that the macrobenthic community on Mtunzini Beach was not structured primarily by physical factors, but instead by a complex and dynamic blend of nutritional, chemical and physical drivers. This emphasises the need to recognise ocean-exposed sandy beaches as functional ecosystems in their own right.     

Spatial and temporal variation of the benthic macrofauna in a grossly polluted estuary from southwestern Spain

The spatial–temporal variation of subtidal macrofauna communities of the Odiel–Tinto estuary, one of the most polluted areas in the world, was studied along a sampling period of 4 years (and 3 sampling events). This system has shown typical water and sediment characteristics of estuarine areas although the inner stations showed high concentrations of heavy metals. The structure of the macrofauna community was associated with granulometry, the percentage of organic matter and the heavy metals. Like in other estuaries, the community was dominated by polychaetes (especially by small size opportunistic taxa), meanwhile the crustaceans were the least abundant. Some changes during the sampling period were slight increment in richness and diversity; greater presence of molluscs and crustaceans in the inner zones; a more homogeneous spatial distribution of opportunistic taxa and a higher number of taxa involved in the differences among the estuary areas. The period of study does not allow assuring that these changes have been due to a true improvement or to natural cycles of the communities in naturally stressed systems. So that it would be necessary the establishment of a long-term monitoring programme to study the evolution of the macrofauna communities to state whether the corrective measures could achieve an improvement of this environment. This programme should focus on the study of macrobenthic community’s structure and on those selected parameters, which have been the major structuring factors for these communities.     

Macrobenthic prey availability and the potential for food competition between 0 year group Pleuronectes platessa and Limanda limanda

This study describes the feeding habits of plaice Pleuronectes platessa and dab Limanda limanda during early juvenile development and relates differences between nursery grounds and sampling years to spatial and temporal variabilities in macrobenthic prey availability. The main prey taxa of both species were copepods, bivalves, amphipods, polychaetes and oligochaetes and size-related variation in diet was found. Despite considerable similarity in the prey items, differences in food composition between the two species were observed and spatial variability in diet confirmed their opportunistic feeding behaviour. A high degree of dietary overlap was found in June and decreased steadily throughout the season. The prey composition in the guts of both species largely reflected the composition of the main macrobenthic taxa in the sediment. The overall data suggest that resources were not limiting in the littoral sandy nursery areas in the west of Ireland and no indications were found that exploitative competitive forces upon the benthic prey assemblages occurred between P. platessa and L. limanda. Feeding success, Fulton's K condition and dietary overlap, however, showed spatial and temporal variations, and were probably affected by the availability and density of macrobenthic prey.