Methods for detection and measurement of hydrogen peroxide inside and outside of cells

Hydrogen peroxide (H₂O₂) is an incompletely reduced metabolite of oxygen that has a diverse array of physiological and pathological effects within living cells depending on the extent, timing, and location of its production. Characterization of the cellular functions of H₂O₂ requires measurement of its concentration selectively in the presence of other oxygen metabolites and with spatial and temporal fidelity in live cells. For the measurement of H₂O₂ in biological fluids, several sensitive methods based on horseradish peroxidase and artificial substrates (such as Amplex Red and 3,5,3’5’-tetramethylbenzidine) or on ferrous oxidation in the presence of xylenol orange (FOX) have been developed. For measurement of intracellular H₂O₂, methods based on dihydro compounds such as 2’,7’-dichlorodihydrofluorescein that fluoresce on oxidation are used widely because of their sensitivity and simplicity. However, such probes react with a variety of cellular oxidants including nitric oxide, peroxynitrite, and hypochloride in addition to H₂O₂. Deprotection reaction-based probes (PG1 and PC1) that fluoresce on H₂O₂-specific removal of a boronate group rather than on nonspecific oxidation have recently been developed for selective measurement of H₂O₂ in cells. Furthermore, a new class of organelle-targetable fluorescent probes has been devised by joining PG1 to a substrate of SNAP-tag. Given that SNAP-tag can be genetically targeted to various subcellular organelles, localized accumulation of H₂O₂ can be monitored with the use of SNAP-tag bioconjugation chemistry. However, given that both dihydro- and deprotection-based probes react irreversibly with H₂O₂, they cannot be used to monitor transient changes in H₂O₂ concentration. This drawback has been overcome with the development of redox-sensitive green fluorescent protein (roGFP) probes, which are prepared by the introduction of two redox-sensitive cysteine residues into green fluorescent protein; the oxidation of these residues to form a disulfide results in a conformational change of the protein and altered fluorogenic properties. Such genetically encoded probes react reversibly with H₂O₂ and can be targeted to various compartments of the cell, but they are not selective for H₂O₂ because disulfide formation in roGFP is promoted by various cellular oxidants. A new type of H₂O₂-selective, genetically encoded, and reversible fluorescent probe, named HyPer, was recently prepared by insertion of a circularly permuted yellow fluorescent protein (cpYFP) into the bacterial peroxide sensor protein OxyR.     

Dynamics and mechanisms of oscillatory photosynthesis

We classify mathematical models that can be used to describe photosynthetic oscillations using ideas from nonlinear dynamics, and discuss potential mechanisms for photosynthetic oscillations in the context of this classification. We then turn our attention to recent experiments with leaves transferred to a low CO₂ atmosphere which revealed stochastic oscillations with a period of a few seconds. Rubisco is the enzyme that takes both CO₂ and O₂ as substrates correspondingly for photosynthetic assimilation and for photorespiration. Photosynthesis depletes CO₂ and produces O₂ while respiration and photorespiration work in the opposite direction, so the product of one process becomes the reactant of the other coupled process. We examine the possibility of oscillations of CO₂ and O₂ in the leaf in relation to photorespiration. We suggest that in the cell, oscillations with a period of a few seconds, corresponding to the time between photosynthetic CO₂ fixation and photorespiratory CO₂ release, underlie the dynamics of metabolism in C₃ plants.     

Agriculture's impact on microbial diversity and associated fluxes of carbon dioxide and methane

Agriculture has marked impacts on the production of carbon dioxide (CO₂) and consumption of methane (CH₄) by microbial communities in upland soils—Earth''s largest biological sink for atmospheric CH₄. To determine whether the diversity of microbes that catalyze the flux of these greenhouse gases is related to the magnitude and stability of these ecosystem-level processes, we conducted molecular surveys of CH₄-oxidizing bacteria (methanotrophs) and total bacterial diversity across a range of land uses and measured the in situ flux of CH₄ and CO₂ at a site in the upper United States Midwest. Conversion of native lands to row-crop agriculture led to a sevenfold reduction in CH₄ consumption and a proportionate decrease in methanotroph diversity. Sites with the greatest stability in CH₄ consumption harbored the most methanotroph diversity. In fields abandoned from agriculture, the rate of CH₄ consumption increased with time along with the diversity of methanotrophs. Conversely, estimates of total bacterial diversity in soil were not related to the rate or stability of CO₂ emission. These combined results are consistent with the expectation that microbial diversity is a better predictor of the magnitude and stability of processes catalyzed by organisms with highly specialized metabolisms, like CH₄ oxidation, as compared with processes driven by widely distributed metabolic processes, like CO₂ production in heterotrophs. The data also suggest that managing lands to conserve or restore methanotroph diversity could mitigate the atmospheric concentrations of this potent greenhouse gas.     

Autoantibodies and monoclonal antibodies in the purification and molecular characterization of neurotransmitter receptors

The combination of immunological advances with membrane receptor research has promoted rapid progress in the molecular characterization of neurotransmitter receptor molecules. We have to date produced monoclonal antibodies to β₁-, β₂-, and β₁-adrenergic, D₂-dopaminergic, and muscarinic receptors. In addition we have discovered that some allergic respiratory disease patients possess circulating autoantibodies to β₂-adrenergic receptors. These antireceptor antibodies in conjunction with specific receptor affinity reagents have allowed us to isolate, purify, and begin to characterize α- and β-adrenergic, dopaminergic, and muscarinic receptors. For example, immunoprecipitation of turkey erythrocyte β₁ receptors with monoclonal antibodies yields a single polypeptide M_r 65–70 K. In contrast, purification of β₂-adrenergic receptors using either autoantibodies or monoclonal antibodies yields a receptor species with a subunit of M_r 55–59 K. Autoantibodies to β₂ receptors demonstrate a 50–100% homology among β₂ receptors from humans to rats, whereas monoclonal antibody FV-104 recognizes a determinant in the ligand binding site of all β₁ and β₂ receptors tested to date. These data suggest that β₁- and β₂-adrenergic receptors may have evolved from a common ancestor, perhaps by gene duplication.     

Protein modeling and molecular dynamics simulation of the two novel surfactant proteins SP-G and SP-H

The prospects of a control for a novel gallium nitride pseudo-halide vapor phase epitaxy (PHVPE) with HCN were thoroughly analyzed for hydrocarbons–NH₃–Ga gas phase on the basis of quantum chemical investigation with DFT (B3LYP, B3LYP with D3 empirical correction on dispersion interaction) and ab-initio (CASSCF, coupled clusters, and multireference configuration interaction including MRCI+Q) methods. The computational screening of reactions for different hydrocarbons (CH₄, C₂H₆, C₃H₈, C₂H₄, and C₂H₂) as readily available carbon precursors for HCN formation, potential chemical transport agents, and for controlled carbon doping of deposited GaN was carried out with the B3LYP method in conjunction with basis sets up to aug-cc-pVTZ. The gas phase intermediates for the reactions in the Ga-hydrocarbon systems were predicted at different theory levels. The located π-complexes Ga…C₂H₂ and Ga…C₂H₄ were studied to determine a probable catalytic activity in reactions with NH₃. A limited influence of the carbon-containing atmosphere was exhibited for the carbon doping of GaN crystal in the conventional GaN chemical vapor deposition (CVD) process with hydrocarbons injected in the gas phase. Our results provide a basis for experimental studies of GaN crystal growth with C₂H₄ and C₂H₂ as auxiliary carbon reagents for the Ga-NH₃ and Ga-C-NH₃ CVD systems and prerequisites for reactor design to enhance and control the PHVPE process through the HCN synthesis.     

Synthesis and characterization of Ru(II) and Ru(III) complexes of diphenylphosphinoacetic acid and their interaction with small molecules

Complexes of Ru(II) and Ru(III) with the bidentate ligand diphenylphosphinoacetic acid (POH) are reported. The ligand POH reacts with RuCl₂(PPh₃)₃ in a 1:3 ratio to give a five-coordinate complex of composition Ru(PO)₂(POH) with complete displacement of PPh₃. In a 1:2 ratio however the complex Ru(PO)₂(PPh₃) is formed. The reaction of POH with RuCl₂(DMSO)₄ in a 2:1 ratio afforded a yellow complex of composition HRu(PO)₂Cl(DMSO). In a 3:1 ratio of POH to RuCl₂(DMSO)₄ however, the complex HRu(PO)₃ was obtained. Neutral complexes of the composition Ru(PO)₂Cl(AsPh₃) and Ru(PO)₃ were obtained by the reaction of RuCl₃(AsPh₃)₂·MeOH with POH in 1:2 and 1:3 mole ratios in acetone solution, respectively. A dimeric chloro bridged complex of composition [Ru(PO)₂Cl]₂ was obtained on reaction of RuCl₃3H₂O with POH in methanol. The complexes have been characterized on the basis of elemental analysis ¹H, ¹³C{¹H} and ³¹P{¹H} NMR, EPR and electrochemical studies.The square pyramidal complexes 1 and 2 undergo facile addition reactions with CO, H₂, PPh₃ and DMSO to form octahedral species. The redox potentials Ru^III/Ru^II of the complexes become more positive with an increase in the π-acidity of the ligand coordinated to the metal ion.     

Yield and nitrogen uptake of rapessed (Brassica campestris L.) with ammonium and nitrate

Water culture, growth chamber, greenhouse and field experiments were conducted to compare the effect of NH₄−N and NO₃−N on yield and N uptake of rapeseed (Brassica campestris L.). In water culture, the yields of 28-day old rapeseed plants grown at 14 μg N ml⁻¹ were double with NO₃ compared to NH₄, but N uptake was little affected. There was no such effect when concentration was reduced to 3.5 or 7 μg N ml⁻¹. The yield and N uptake of 26-day old rapeseed grown on six soils (pH 4.6 to 6.5) in pots in a growth chamber were much greater with NO₃ than with NH₄, although N concentration was more in the NH₄- than the NO₃-grown plants. In a greenhouse experiment with rapeseed grown on 12 potted soils, the N uptake of applied N was greater with NO₃ than with NH₄ on all soils. Averages were 63% with NH₄ and 78% with NO₃. However, NH₄-fixation capacities of the soils were only weakly correlated with yield from the two sources of N (r=0.48) and the relation was similar with N uptake. In contrast to the behavior of water culture, growth chamber and greenhouse experiments, the 33 field experiments did not show consistent difference in seed yield with NH₄ and NO₃ applied at time of seeding. In nine field experiments where band application was used for Ca(NO₃)₂, (NH₄)₂ SO₄, NH₄ NO₃, yield tended to be greatest for (NH₄)₂SO₄. However, in 19 experiments on acid soils with and without lime, yields in most cases were similar with (NH₄)₂SO₄ and NH₄ NO₃. Nitrification inhibitors were added to spring banded NH₄-based fertilizers in five experiments, but the yields were not influenced. Scientific Paper No. 558, Lacombe Research Station, Agriculture Canada.     

Reactivity of glyoxylate with hydrogen perioxide and simulation of the glycolate pathway of C3 plants and Euglena

The nonenzymatic reaction of glyoxylate and H₂O₂ was measured under physiological conditions of the pH and concentrations of reactants. The reaction of glyoxylate and H₂O₂ was secondorder, with a rate constant of 2.27 l mol^-1 s^-1 at pH 8.0 and 25° C. The rate constant increased by 4.4 times in the presence of Zn²⁺ and doubled at 35°C. We propose a mechanism for the reaction between glyoxylate and H₂O₂. From a comparison of the rates of H₂O₂ decomposition by catalase and the reaction with glyoxylate, we conclude that H₂O₂ produced during glycolate oxidation in peroxisomes is decomposed by catalase but not by the reaction with glyoxylate, and that photorespiratory CO₂ originates from glycine, but not from glyoxylate, in C₃ plants. Simulation using the above rate constant and reported kinetic parameters leads to the same conclusion, and also makes it clear that alanine is a satisfactory amino donor in the conversion of glyoxylate to glycine. Some serine might be decomposed to give glycine and methylene-tetrahydrofolate; the latter is ultimately oxidized to CO₂. In the simulation of the glycolate pathway of Euglena, the rate constant was high enough to ensure the decarboxylation of glyoxylate by H₂O₂ to produce photorespiratory CO₂ during the glycolate metabolism of this organism.Abbreviations Chl chlorophyll - GGT glutamate: glyoxylate aminotransferase (EC 2.6.1.4) - Hepes 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid - SGT serine: glyoxylate aminotransferase (EC 2.6.1.45) This is the ninth in a series on the metabolism of glycolate in Euglena gracilis. The eighth is Yokota et al. (1982)     

Effect of anaerobiosis on photosynthetic reactions and nitrogen metabolism of algae with and without hydrogenase

Summary The effect of anaerobic (N₂+CO₂) pre-incubation in the dark on photosynthetic reactions (O₂ evolution, measured manometrically and with the oxygraph; fluorescence; and photoproduction of H₂, measured with the mass spectrometer) was studied in algae with hydrogenase (strains of Chlorella fusca, C. kessleri, C. vulgaris f. tertia, and Ankistrodesmus braunii) and in algae without hydrogenase (strains of Chlorella vulgaris, C. saccharophila, and C. minutissima).The inhibition by anaerobic incubation of photosynthetic O₂ evolution is much stronger in algae without hydrogenase than it is in algae with hydrogenase. The effect of anaerobiosis is most pronounced at rather low light intensity (about 1000 lux), in acid medium (pH 4), and after prolonged anaerobic incubation in the dark (about 20 h). These results indicate that the presence of hydrogenase might be ecologically advantageous for algae under certain conditions.Chlorophyll fluorescence showed the fastest response to anaerobic incubation, and the most pronounced difference between algae with and without hydrogenase. After only 30 min under N₂+CO₂, fluorescence in algae with hydrogenase starts with a peak and decreases within 10 to 20 sec to a rather low steady-state level which is only slightly higher than that found under aerobic conditions. In algae without hydrogenase, fluorescence is rather low during the first 1 to 2 sec and then rises to a higher steady-state level which is much higher than that of the aerobic controls. This indicates an inhibition due to anaerobiosis of photosystem II in algae without hydrogenase.Algae with hydrogenase can react in different ways during the first minutes of illumination. In some cases there is an immediate photoproduction of H₂, which is followed after a few minutes by photosynthetic O₂ evolution; in other algae there is a simultaneous production of H₂ and O₂ from the very beginning; in a few experiments there was no photoproduction of H₂ at all, and in this case there was no photosynthetic O₂ evolution either. Thus, photoproduction of H₂ seems to be the process which normally enables algae with hydrogenase to oxidise and thereby activate their photosynthetic electron transport system after anaerobic incubation.A mass spectrometric search for nitrogen fixation (using N₂ and acetylene) in eucaryotic green algae gave negative results, even with species containing hydrogenase and under anaerobic conditions.     

Conformational study of linear alternating and mixed D- and L-proline oligomers using electronic and vibrational CD and fourier transform IR

Vibrational CD (VCD) spectra of a series of blocked linear, alternating D - and L -proline containing oligopeptides, dissolved in D₂O and in CDCl₃. are reported. For the Boc-LDL -Pro₃ to Boc-DLDLDLDL-Pro₈ oligomers. The VCD spectra in the amide I band is a positive couplet, opposite in sense to that obtained for (L -Pro)_n oligomers. While this admits the possibility of their favoring a right-handed helical chain conformation, the amide I ir spectra for these dl oligomers in D₂O indicate a mixed, apparently alternate, cis-trans conformation that prevents a simple conclusion. Their VCD in D₂O evidence no narrowing and has a progressive loss in intensity (measured as Δ /A,) with an increase in chain length. In CDCl₃a similar pattern of positive VCD couplets decreasing in intensity with length was seen, but their spectra are narrower. Their electronic CD (ECD) in the uv, also indicates a loss in intensity with increasing length. Oligomers with odd or even numbers of Pro residues have different ECD patterns, indicating that those spectra are strongly influenced by local contributions arising in the N-terminal groups. The VCD arises from dipolar and vibrational coupling of the amides in the helical structure. All the spectra are consistent with the chiral end groups leading to formation of an excess of one helical handedness. With an increase in length, the influence of this selectiveness is less and the overall CD measured decreases. © 1995 John Wiley & Sons, Inc.     

Effect of growth and subsequent decomposition of blue-green algae on the transformation of iron and manganese in submerged soils

N₂-fixing blue-green algae (Cyanobacteria), besides enriching soils with N and organic carbon, may modify a number of chemical and electro-chemical properties of the soils resulting in a change in availability of some micronutrient elements. Keeping this in view, an experiment was conducted to study the effects of growth and subsequent decomposition of blue-green algae on changes in the different forms of Fe and Mn in four soils under submerged condition. A mixed algal culture containing Anabaena, Nostoc, Cylindrospermum, and Tolypothrix was used as inoculum. It was allowed to grow for 2 months, after which the soils were sequentially extracted with (i) M NH₄OAc (pH 7.0), (ii) M K₄P₂O₇, (iii) 0.1 M NH₂OH.HCl (pH 2.0), (iv) 0.2 M (NH₄)₂C₂O₄ (pH 3.0) and (v) 0.1 M ascorbic acid to obtain water-soluble plus exchangeable, organically bound, easily reducible, amorphous oxides-and crystalline oxides-bound forms of Fe and Mn, respectively, both during the growth as well as the subsequent in-situ decomposition of the algal biomass in soils. Iron and Mn in the extracts were estimated by atomic absorption spectrophotometry.The results showed that growth of blue-green algae in submerged rice soils caused a decrease in the NH₄OAc-extractable forms of Fe and Mn with concomitant increases in all the other four determined forms of the elements. Such decreases and/or increases in different forms of Fe and Mn in soils were explained as being due to release of O₂, addition of organic matter and liberation of extracellular organic compounds by the blue-green algae during their growth. The decomposition of algal biomass resulted in an increase in the NH₄OAc-, K₄P₂O₇- and (NH₄)₂C₂O₄-extractable forms of Fe and Mn with a simultaneous decrease in the NH₂OH · HCl- and ascorbic acid-extractable forms. Development of strong reducing conditions and formation of organic acids with chelating properties were suggested as being the cause of the above changes. The implication of these changes in the forms of Fe and Mn for the Fe and Mn nutrition of rice plants were discussed.     

Effects of temperature and oxygenavailability on greenhouse gas and nutrient dynamics in sediment of a eutrophic mid-boreal lake

The effects of oxygen conditions and temperature on dynamics of greenhousegases (CH₄, CO₂, N₂O) and nutrients(NH₄ ⁺, NO₂ ^–+NO₃ ^–, tot-P) were studied in sediment of hyper-eutrophic LakeKevätön, Finland. Undisturbed sediment cores were incubated at 6, 11,16, and 23 °C in a laboratory microcosm using a continuouswater flowtechnique with an oxic or anoxic water flow. The production of CO₂increased with increasing temperature in both oxic (Q₁₀ 3.2 ±0.6) and anoxic (Q₁₀ 2.3 ± 0.4) flows. The release ofCH₄ increased with temperature in anoxic conditions (Q₁₀2.3 ± 0.2), but was negligible with the oxic flow at all temperatures.The release of NH₄ ⁺ increased with temperature with the oxic and anoxic flows(Q₁₀ 2.4 ± 0.1). There was a net production of NO₂ ^–, NO₃ ^– and N₂O with the oxic flow at temperatures below16 °C. The release of phosphorus was greater from the anoxicsediments and increased with temperature with both the anoxic (Q₁₀2.9 ± 0.5) and oxic (Q₁₀ 1.9 ± 0.1) flows. It isprobable that the temperature of boreal lakes and the associated oxygendeficiency will increase as the climate becomes warmer. Our experiments showedthat this change would increase the global warming potential of greenhousegasesreleased from sediments of eutrophic lakes predominately attributable to theincrease in the CH₄ production. Furthermore, warming would alsoaccelerate the eutrophication of lakes by increasing release of phosphorus andmineral nitrogen from sediments, which further enhance CH₄productionin sediments.     

Effect of zinc sources and levels on the growth and Zn nutrition of soybean (Glycine max. L.) in the presence of chloride and sulphate salinity

A study was conducted in a screen house in pots on a sandy loam soil deficient in Zn. Salinity was induced by adding 44, 88 and 132 me/l of chloride and sulphate salts in the saturation extract. To these treatments, 0, 5 and 10 ppm Zn were added as ZnSO₄·7H₂O or Zn-EDTA. The results indicated that the yield of soybean shoot was lowest at the highest salinity level and highest at the lowest level. Shoot yield improved markedly with Zn application. Both sources of Zn were equally effective in augmenting crop yields. Yields were low in Cl-salinity when compared with equivalent levels of SO₄-salinity. Application of ZnSO₄·7H₂O produced higher yields in SO₄-dominant salinity. Zinc content increased and Zn uptake decreased with increase in Cl-salinity regardless of Zn sources. In SO₄-salinity, ZnSO₄·7H₂O did not influence the Zn content, but uptake was suppressed with increase in SO₄-salinity. Increasing rates of SO₄-salinity enhanced Zn content in the presence of Zn-EDTA.     

Thermo- and Photoperiodicity and Involvement of Gibberellins during Day and Night Cycle on Elongation Growth of Begonia x hiemalis Fotsch

The effects of thermo- and photoperiodicity on elongation growth and on endogenous level of gibberellins (GAs) in Begonia x hiemalis during various phases of the day-night cycle have been studied. Plant tissue was harvested during the day and night cycle after temperature and photoperiodic treatments and analyzed for endogenous GAs using combined gas chromatography and mass spectrometry. Elongation growth increased when the difference between day and night temperature (DIF = DT − NT) increased from a negative value (−9.0 and −4.5°C) to zero and with increasing photoperiod from 8 to 16 h. When applied to the youngest apical leaf, gibberellins A₁, A₄, and A₉ increased the elongation of internodes and petioles. GA₄ had a stronger effect on elongation growth than GA₁ and GA₉. In relative values, the effect of these GAs decreased when DIF increased from −9 to 0°C. The time of applying the GAs during a day and night cycle had no effect on the growth responses. In general, endogenous levels of GA₁₉ and GA₂₀ were higher under negative DIF compared with zero DIF. The level of endogenous GA₁ in short day (SD)-grown plants was higher under zero DIF than under negative DIF, but this relationship did not appear in long day (LD)-grown plants. The main effects of photoperiod seem to be a higher level of GA₁₉ and GA₁ at SD compared with LD, whereas GA₂₀ and GA₉ show the opposite response to photoperiod. No significant differences in endogenous level of GA₁, GA₉, GA₁₉, and GA₂₀ were found for various time points during the diurnal day and night cycle. Endogenous GA₂₀ was higher in petiole and leaf compared with stem, whereas there were no differences of GA₁, GA₉, and GA₁₉ between plant parts. No clear relationship was found between elongation of internodes and petioles and levels of endogenous GAs. Received December 26 1996; accepted July 1, 1997     

Phosphate: Known and potential roles during development and regeneration of teeth and supporting structures

Inorganic phosphate (P_i) is abundant in cells and tissues as an important component of nucleic acids and phospholipids, a source of high‐energy bonds in nucleoside triphosphates, a substrate for kinases and phosphatases, and a regulator of intracellular signaling. The majority of the body's P_i exists in the mineralized matrix of bones and teeth. Systemic P_i metabolism is regulated by a cast of hormones, phosphatonins, and other factors via the bone‐kidney‐intestine axis. Mineralization in bones and teeth is in turn affected by homeostasis of P_i and inorganic pyrophosphate (PPi), with further regulation of the P_i/PP_i ratio by cellular enzymes and transporters. Much has been learned by analyzing the molecular basis for changes in mineralized tissue development in mutant and knock‐out mice with altered P_i metabolism. This review focuses on factors regulating systemic and local P_i homeostasis and their known and putative effects on the hard tissues of the oral cavity. By understanding the role of P_i metabolism in the development and maintenance of the oral mineralized tissues, it will be possible to develop improved regenerative approaches. Birth Defects Research (Part C) 84:281–314, 2008. © 2008 Wiley‐Liss, Inc.     

Responses of cotton and wheat photosynthesis and growth to cyclic variation in carbon dioxide concentration

The carbon dioxide concentration in free air carbon dioxide enrichment (FACE) systems typically has rapid fluctuations. In our FACE system, power spectral analysis of CO₂ concentration measured every second with an open path analyzer indicated peaks in variation with a period of about one minute. I used open-top chambers to expose cotton and wheat plants to either a constant elevated CO₂ concentration of 180 ??mol mol^?1 above that of outside ambient air, or to the same mean CO₂ concentration, but with the CO₂ enrichment cycling between about 30 and 330 ??mol mol^?1 above the concentration of outside ambient air, with a period of one minute. Three short-term replicate plantings of cotton were grown in Beltsville, Maryland with these CO₂ concentration treatments imposed for 27-day periods over two summers, and one winter wheat crop was grown from sowing to maturity. In cotton, leaf gas-exchange measurements of the continuously elevated treatment and the fluctuating treatment indicated that the fluctuating CO₂ concentration treatment consistently resulted in substantial down-regulation of net photosynthetic rate (P _N) and stomatal conductance (g _s). Total shoot biomass of the vegetative cotton plants in the fluctuating CO₂ concentration treatment averaged 30% less than in the constantly elevated CO₂ concentration treatment at 27 days after planting. In winter wheat, leaf gas-exchange measurements also indicated that down-regulation of P _N and g _s occurred in flag leaves in the fluctuating CO₂ concentration treatment, but the effect was not as consistent in other leaves, nor as severe as found in cotton. However, wheat grain yields were 12% less in the fluctuating CO₂ concentration treatment compared with the constant elevated CO₂ concentration treatment. Comparison with wheat yields in chambers without CO₂ addition indicated a nonsignificant increase of 5% for the fluctuating elevated CO₂ concentration treatment, and a significant increase of 19% for the constant elevated treatment. The results suggest that treatments with fluctuating elevated CO₂ concentrations could underestimate plant growth at projected future atmospheric CO₂ concentrations.     

The effects of several factors on the growth of pure and mixed cultures of Azotobacter chroococcum and Bacillus subtilis

We studied the effect of a clay mineral, palygorskite, on the physiological activity of Azotobacter chroococcum and the phosphate-mobilizing bacterium Bacillus subtilis, as well as their mixed cultures, under various oxygen supply conditions during the utilization of phosphorus from readily and poorly soluble compounds (K₂HPO₄ · 3H₂O) and (Ca₃(PO₄)₂), respectively. During cultivation of the bacteria in a nutrient medium with Ca₃(PO₄)₂, the number of microorganisms was higher than that observed in a medium with K₂HPO₄. An increase in oxygen mass transfer in the nutrient medium was followed by a rise in the number of Bacillus subtilis cells and an inhibition of Azotobacter chroococcum growth. An addition of palygorskite (5 g/l) into the nutrient medium stimulated the growth of both bacteria and stopped the decreasing growth of Azotobacter chroococcum at high values of oxygen mass transfer. The number of Bacillus and, particularly, Azotobacter cells was two to five times lower in a mixed culture than in a monoculture. These differences were less significant during the cultivation of mixed cultures in medium with palygorskite.     

Quantitation of vitamin D and its metabolites and their plasma concentrations in five species of animals

Chromatographic methods suitable for the resolution of 24,25-dihydroxyvitamin D₃, 24,25-dihydroxyvitamin D₂, 25-hydroxyvitamin D₃-26,23 lactone, and 25,26-dihydroxyvitamin D₂ are described. These four metabolites comigrated in high-pressure liquid chromatography on silicic acid columns developed in 11:89 isopropanol:hexane. Adequate resolution was achieved by subjecting the four-metabolite complex to high-pressure liquid chromatography column developed in 2:98 isopropanol:methylene chloride. This additional chromatographic step, coupled with modifications of assay procedures previously described, allowed for the estimation of plasma concentrations of vitamin D₂, vitamin D₃, 25-hydroxyvitamin D₂, 25-hydroxyvitamin D₃, 24,25-dihydroxyvitamin D₂, 24,25-dihydroxyvitamin D₃, 25,26 dihydroxyvitamin D₂, 25,26-dihydroxyvitamin D₃, 25-hydroxyvitamin D₃-26,23 lactone, and 1,25-dihydroxyvitamin D (1,25-dihydroxyvitamin D₂ plus 1,25-dihydroxyvitamin D₃). The samples automatically were introduced onto the high-pressure liquid chromatography columns with a Waters 710A “intelligent” processor. The metabolites were automatically collected with the aid of a programmable timer that advanced a fraction collector at predetermined intervals. The assays were used to determine the plasma vitamin D and vitamin D metabolite concentrations in five species of adult farm animals.     

覆盖材料和沟垄比对土壤水分和紫花苜蓿干草产量的影响

为寻求半干旱黄土高原区种植紫花苜蓿的适宜覆盖材料和最佳沟垄比,采用完全随机设计布置大田试验,以传统平作为对照,研究不同垄覆盖材料(土壤结皮、生物可降解地膜和普通地膜)和不同沟垄比(沟宽:垄宽分别为60∶30、60∶45和60∶60,单位是cm)对土壤水分和紫花苜蓿干草产量等的影响。结果表明:通过对2012年和2013年紫花苜蓿生育期降雨量统计,2a平均值显示,无效降雨次数(53次)大于有效降雨次数(27次),无效降雨对总降雨量的贡献率(19%)小于有效降雨(81%)。就紫花苜蓿全生育期而言,与平作相比,SR_(30)、SR_(45)、SR_(60)、BMR_(30)、BMR_(45)、BMR_(60)、CMR_(30)、CMR_(45)和CMR_(60)(SR、BMR和CMR分别代表土垄、生物可降解膜垄和普通膜垄,下标分别表示垄宽为30、45cm和60cm)连续2a的平均根层(0—140 cm)土壤贮水量分别提高12.8、19.2、24.4、26.0、30.7、40.5、29.9、37.1 mm和47.7 mm。垄沟集雨种植第1年龄和第2年龄紫花苜蓿根层没有出现明显干层。与平作相比,SR_(30)、SR_(45)和SR_(60)的连续2a紫花苜蓿平均实际干草产量分别降低3%、8%和13%,WUE分别提高52%、58%和55%;BMR_(30)、BMR_(45)、BMR_(60)、CMR_(30)、CMR_(45)和CMR_(60)的连续2a紫花苜蓿平均实际干草产量分别提高14%、12%、7%、17%、19%和9%,WUE分别提高49%、62%、59%、51%、67%和56%。当紫花苜蓿生育期降雨量为380.7—427.6 mm和沟垄比为60 cm∶35—36 cm时,生物可降解膜垄和普通膜垄的紫花苜蓿实际干草产量达到最大值,为该地区垄沟集雨种植紫花苜蓿提供参考。     

The age of the grasses and clusters of origins of C4 photosynthesis

At high temperatures and relatively low CO₂ concentrations, plants can most efficiently fix carbon to form carbohydrates through C₄ photosynthesis rather than through the ancestral and more widespread C₃ pathway. Because most C₄ plants are grasses, studies of the origin of C₄ are intimately tied to studies of the origin of the grasses. We present here a phylogeny of the grass family, based on nuclear and chloroplast genes, and calibrated with six fossils. We find that the earliest origins of C₄ likely occurred about 32 million years ago (Ma) in the Oligocene, coinciding with a reduction in global CO₂ levels. After the initial appearance of C₄ species, photosynthetic pathway changed at least 15 more times; we estimate nine total origins of C₄ from C₃ ancestors, at least two changes of C₄ subtype, and five reversals to C₃. We find a cluster of C₄ to C₃ reversals in the Early Miocene correlating with a drop in global temperatures, and a subsequent cluster of C₄ origins in the Mid‐Miocene, correlating with the rise in temperature at the Mid‐Miocene climatic optimum. In the process of dating the origins of C₄, we were also able to provide estimated times for other major events in grass evolution. We find that the common ancestor of the grasses (the crown node) originated in the upper Cretaceous. The common ancestor of maize and rice lived at 52 ± 8 Ma.