Broadleaf Litter Controls Feather Moss Growth in Black Spruce and Birch Forests of Interior Alaska

Ecosystems - Plant–soil feedbacks can maintain or reinforce alternative states within ecological systems. In Alaskan boreal forests, changes in fire characteristics have stimulated the...     

Types of Morphogenetic Phenomena in Vertebrate Regenerating Systems

Within the regenerating amphibian limb the regeneration blastemarepresents the focus of the dominant epimorphic regenerativeprocess. More proximally, tissue regenerative processes areprominent within certain tissues of the stump. It is not yetknown whether all tissues present within the limb regenerateare laid down as part of a single allinclusive plan or whetherthe morphogenesis of some tissues is dependent upon secondarycues. Initial axial deviation of regenerates arising from obliqueamputation surfaces (Barfurth's rule) is compared with the permanentaxial deviation of regenerates from zeugopodial segments oflimbs from which one skeletal element has been removed. Homeoticregenerates are commonly produced in arthropods, but they haveyet to be demonstrated in regenerating vertebrate extremities.Individual tissue components of limbs regenerate well, and theirmorphogenesis appears to be controlled largely by the functionalenvironment in which the regenerative process is taking place.Under appropriate conditions, terminally amputated mammalian,including human, digits produce well organized outgrowths completewith nails or claws. Whether or not this form of outgrowth isdirectly comparable with an epimorphically regenerating amphibianlimb remains to be seen.     

Tree Species Change in Nemoral Spruce Forests of the Central Forest Reserve

Biology Bulletin - Changes in the forest-forming species in the nemoral spruce forests of the Central Forest Reserve (Tver oblast, Russian Federation) are discussed. The characterization of...     

A Meta-analysis of Climatic and Chemical Controls on Leaf Litter Decay Rates in Tropical Forests

Although tropical forests occupy a small fraction of the earth’s total land area, they play a disproportionately large role in regulating the global carbon cycle. Yet controls on both primary productivity and decomposition in tropical forests are not well-studied in comparison with temperate forests and grasslands, despite their extreme biogeochemical heterogeneity. To evaluate the relative importance of climate and foliar chemical variables in driving decomposition in tropical forests, I performed a meta-analysis of reported leaf litter decay rates throughout tropical forest ecosystems. Using a model selection procedure based on Akaike’s Information Criterion, I found that temperature and precipitation played little direct role in regulating decomposition rates, except in montane forests where cool temperatures slowed decay. Foliar concentrations of calcium, magnesium, nitrogen, phosphorus, and potassium were important predictors of mass loss rates, although each of these factors explained a very small amount of variance when considered in isolation. The large amount of unexplained variation in decomposition rates observed both within and across tropical forest sites may be due to other factors not explored here, such as soil biota or complex plant secondary chemistry. Carbon cycling in tropical forests seems to be modulated by the availability of multiple nutrients, underscoring the need for additional manipulative experiments to explore patterns of belowground nutrient limitation across the biome. Because models of decomposition developed in temperate ecosystems do not appear to be generalizable to wet tropical forests, new biogeochemical paradigms should be developed to accommodate their unique combination of climatic, edaphic, and biotic factors.     

Leaf Litter Disappearance in Earthworm-Invaded Northern Hardwood Forests: Role of Tree Species and the Chemistry and Diversity of Litter

Earthworm invasion in North American temperate forest reduces forest floor mass, yet the interactions between litter composition, invasive earthworm community composition, and forest floor structure and composition are not well understood. For 2?years, we compared disappearance of leaf litter in field mesocosms in which we manipulated litter composition (monocultures of Quercus rubra, Acer saccharum, and Tilia americana litter, and an equal mixture of all three) and thereby the initial litter chemistry (C, C fractions, N, Ca) in sites with and without the major litter-feeding invasive earthworm species. The disappearance of litter mass followed the same ranking at both the sites: T. americana?>?equal mixtures?>?A. saccharum?≥?Q. rubra. However, differences in disappearance rate between the sites depended on litter composition and time. The differences in mass loss among litters of different compositions were greatest at the site invaded by the large litter-feeding earthworm, Lumbricus terrestris, and especially for T. americana and the mixture. Similarly, observed disappearance of the litter mixture was faster than predicted by an additive model at the site with L. terrestris, especially for the higher quality litter component in early summer. Initial litter calcium content was the best predictor (R ²?≥?0.90) of overall litter mass remaining each year, supporting the idea of the importance of calcium in forest floor dynamics, especially in the presence of calciferous, invasive earthworms.     

基于集成类随机森林方法的神经胶质瘤特征基因选择的研究

神经胶质瘤(glioma)是一种严重的颅内肿瘤疾病,具有高复发率、高死亡率和低治愈率等特点。利用基因微阵列数据识别与神经胶质瘤相关的特征基因,对该疾病的临床诊断和生物医学研究将起到有益的参考和借鉴作用。作者针对神经胶质瘤数据,提出了一种集成类随机森林特征基因选择方法。首先应用有监督奇异值分解对数据进行降维并粗选出基因;其次应用类随机森林特征选择方法选出特征基因。实验结果显示,该方法对分类器的适应性强;对比其他方法,分类率优势明显;更重要的是,在选出的前50个特征基因中有39个基因与神经胶质瘤或肿瘤细胞生物过程存在着密切联系,证实该方法不仅保持了较高的分类率,而且保证了选择的特征基因具有很强的生物学关联意义,具有较高的可行性和实用性。     

Nutrient Movement in Litter Fall and Precipitation Components for Central Himalayan Forests

The annual total litter fall in six Central Himalayan forestsranged from 2.1 to 3.8 t C ha^–1, of which 54 to 82 percent was leaf litter, 9–20 per cent wood litter and 6–14per cent other litter. In all forests the order of relativeabundance of nutrients (kg ha^-1 year^-1) in litter fall was Ca(50.8–91.6) > N (47.7–72.2) > K (22.8–37.1)> P (4.1–6.4). Leaf litter accounted for 63–95per cent of the total nutrients returned through litter fall. In these forests throughfall ranged from 71.3 to 81.4 per cent,stemflow from 0.50 to 2.16 per cent and canopy interceptionfrom 17.7 to 28.2 per cent of the gross rainfall. In the incidentrainfall the concentration and annual input of Ca was the greatestand of P the least. Canopy precipitation was richer in all nutrientscompared to incident rainfall. Net gain of nutrients from thecanopy ranged from 0.16 kg ha^-1 year^-1, for P, to 17.77 kg ha^-1year^-1 for K. Leaching was greatest for K and least for N. Ofthe total quantity of nutrients returned to the soil, 11 to46 per cent was accounted for by precipitation components. Thusprecipitation inputs play a significant role in nutrient cyclingof these forests. Himalaya, forest, litter fall, precipitation components, nutrients     

华北地区针叶林下凋落物层化学性质的研究

森林凋落物中贮积了大量的有机、无机养分物质,它是森林土壤自然肥力的重要来源之一。在森林生态系统中,养分物质的内部循环主要是通过凋落物来实现的。在分解、转化过     

Phosphorus Limitation in Boreal Forests: Effects of Aluminum and Iron Accumulation in the Humus Layer

Plant growth in boreal forests is generally considered to be predominantly nitrogen (N) limited, but forested groundwater discharge areas may be exceptions. In this study, we conducted tests to determine whether highly productive forested groundwater discharge areas generally differ from adjacent groundwater recharge areas in terms of humus chemistry and the availability of phosphorus (P) and N to plants. We investigated six forested sites, divided into groundwater discharge and adjacent groundwater recharge areas, in northern Sweden. The humus layers of the forested groundwater discharge areas were clearly distinguished from the adjacent groundwater recharge areas by having higher acid-digestible calcium (Ca) and/or aluminium (Al) and iron (Fe) content and higher organic P and N content. Soil solution inorganic N (NH₄ ⁺ and NO₃ ⁻) and pH were higher in the groundwater discharge areas than in the groundwater recharge areas. The organic P content showed a positive linear relationship to the Al and Fe content in the humus layer, indicating that organic P is associated with Al and Fe compounds in the humus. A plant bioassay using humus substrate from one groundwater discharge area and the adjacent groundwater recharge area found that plants grown in groundwater discharge area humus (with a high P-fixation capacity) increased their biomass upon P fertilization, whereas no growth response was found for N additions. By contrast, plants grown in humus from the groundwater recharge area did not respond to added P unless N was added too. This study suggests that groundwater discharge can affect the nutrient availability of N and P both directly, via increased P fixation due to the redistribution of Al and Fe, and indirectly, via the inflow of groundwater high in Ca and alkalinity, maintaining a high pH in the humus layer that favors in situ N turnover processes. Received 2 March 2001; Accepted 9 November 2001.     

Control of Nitrous Oxide Emissions in European Beech,Norway Spruce and Scots Pine Forests

Elevated nitrogen deposition has increased tree growth, the storage of soil organic matter, and nitrate leaching in many European forests, but little is known about the effect of tree species and nitrogen deposition on nitrous oxide emission. Here we report soil N₂O emission from European beech, Scots pine and Norway spruce forests in two study areas of Germany with distinct climate, N deposition and soils. N₂O emissions and throughfall input of nitrate and ammonium were measured biweekly during growing season and monthly during dormant season over a 28 months period. Annual N₂O emission rates ranged between 0.4 and 1.3 kg N ha^?1 year^?1 among the stands and were higher in 1998 than in 1999 due to higher precipitation during the growing season of 1998. A 2-way-ANOVA revealed that N₂O fluxes were significantly higher (p<0.001) at Solling than at Unterlüß while tree species had no effect on N₂O emissions. Soil texture and the amount of throughfall explained together 94% of the variance among the stands, indicating that increasing portions of silt and clay may promote the formation of N₂O in wet forest soils. Moreover, cumulative N₂O fluxes were significantly correlated (r² = 0.60, p<0.001) with cumulative NO ₃ ^? fluxes at 10 cm depth as an indicator of N saturation, however, the slope of the regression curve indicates a rather weak effect of NO ₃ ^? fluxes on N₂O emissions. N input by throughfall was not correlated with N₂O emissions and only 1.6–3.2% of N input was released as N₂O to the atmosphere. Our results suggest that elevated N inputs have little effect on N₂O emissions in beech, spruce and pine forests.     

Characterization of Humus Microbial Communities in Adjacent Forest Types That Differ in Nitrogen Availability

To address the link between soil microbial community composition and soil processes, we investigated the microbial communities in forest floors of two forest types that differ substantially in nitrogen availability. Cedar-hemlock (CH) and hemlock-amabilis fir (HA) forests are both common on northern Vancouver Island, B.C., occurring adjacently across the landscape. CH forest floors have low nitrogen availability and HA high nitrogen availability. Total microbial biomass was assessed using chloroform fumigation-extraction and community composition was assessed using several cultivation-independent approaches: denaturing gradient gel electrophoresis (DGGE) of the bacterial communities, ribosomal intergenic spacer analysis (RISA) of the bacterial and fungal communities, and phospholipid fatty acid (PLFA) profiles of the whole microbial community. We did not detect differences in the bacterial communities of each forest type using DGGE and RISA, but differences in the fungal communities were detected using RISA. PLFA analysis detected subtle differences in overall composition of the microbial community between the forest types, as well as in particular groups of organisms. Fungal PLFAs were more abundant in the nitrogen-poor CH forests. Bacteria were proportionally more abundant in HA forests than CH in the lower humus layer, and Gram-positive bacteria were proportionally more abundant in HA forests irrespective of layer. Bacterial and fungal communities were distinct in the F, upper humus, and lower humus layers of the forest floor and total biomass decreased in deeper layers. These results indicate that there are distinct patterns in forest floor microbial community composition at the landscape scale, which may be important for understanding nutrient availability to forest vegetation.     

Classification and Mapping of Coenotic Diversity of Forests

The proposed approach to the study of regularities of spatial variability of plant cover and to mapping forest vegetation is illustrated by the example of European Russia. It is shown that remote sensing and GIS technologies require particular standards of plant cover classification and reflection in maps. The given principles of classification and compilation of explications for maps of forest cover enable an assessment of its status and dynamics and a comparison of materials of different scales. We use the ecological–phytocoenotic approach to classifying forest vegetation. The specified units correspond to the categories of the main classifications of plant cover used in Russian geobotanics. In our classification, we have verified some parameters and the semantics of the mapped units, using satellite images, for their definite identification and interpretation. The elaborated approach to the classification and mapping of forest cover is applied for the study of the diversity of spruce forests under different climatic conditions in two regions, where they occupy about 20% of the total area. The first example characterizes the northern taiga subzone of forests of eastern Fennoscandia in the center of Murmansk oblast, and the second one represents the subzone of broad-leaved–coniferous forest in the southwest of Moscow oblast.     

Tree Species Effect on Litter Decomposition and Nutrient Release in Mediterranean Oak Forests Changes Over Time

Tree species can affect the decomposition process through the quality of their leaf fall and through the species-specific conditions that they generate in their environment. We compared the relative importance of these effects in a 2-year experiment. Litterbags containing leaf litter of the winter-deciduous Quercus canariensis, the evergreen Q. suber and mixed litter were incubated beneath distinct plant covers. We measured litter carbon loss, 9 macro- and micronutrients and 18 soil chemical, physical and biological parameters of the incubation environment. Tree species affected decay dynamics through their litter quality and, to a lesser extent, through the induced environmental conditions. The deciduous litter showed a faster initial decomposition but left a larger fraction of slow decomposable biomass compared with the perennial litter; in contrast the deciduous environment impeded early decomposition while promoting further carbon loss in the latter decay stages. The interaction of these effects led to a negative litter–environment interaction contradicting the home-field advantage hypothesis. Leaf litter N, Ca and Mn as well as soil N, P and soil moisture were the best predictors for decomposition rates. Litter N and Ca exerted counteractive effects in early versus late decay stages; Mn was the best predictor for the decomposition limit value, that is, the fraction of slowly decomposable biomass at the later stage of decomposition; P and soil moisture showed a constant and positive relation with carbon loss. The deciduous oak litter had a higher initial nutrient content and released its nutrients faster and in a higher proportion than the perennial oak litter, significantly increasing soil fertility beneath its canopy. Our findings provide further insights into the factors that control the early and late stages of the decomposition process and reveal potential mechanisms underlying tree species influence on litter decay rate, carbon accumulation and nutrient cycling.     

Modelling Growth-Competition Relationships in Trembling Aspen and White Spruce Mixed Boreal Forests of Western Canada

We examined the effect of competition on stem growth of Picea glauca and Populus tremuloides in boreal mixedwood stands during the stem exclusion stage. We combined traditional approaches of collecting competition data with dendrochronology to provide retrospective measurements of stem diameter growth. Several competition indices including stand basal area (BA), the sum of stem diameter at breast height (SDBH), and density (N) for the broadleaf and coniferous species, as well as similar indices considering only trees with diameters greater than each subject (BAGR, SDBHGR, and NGR), were evaluated. We used a nonlinear mixed model to characterize the basal area increment over the past 5, 10, 15, 20, 25, 30, and 35 years as a function of growth of nearby dominant trees, the size of the subject trees, deciduous and coniferous competition indices, and ecoregions. SDBHGR and BAGR were better predictors for spruce, and SDBHGR and NGR were better for aspen, respectively, than other indices. Results showed strongest correlations with long-term stem growth, as the best models integrated growth for 10–25 years for aspen and ≥25 for spruce. Our model demonstrated a remarkable capability (adjusted R²>0.67) to represent this complex variation in growth as a function of site, size and competition.     

Microbially Available Phosphorus in Boreal Forests: Effects of Aluminum and Iron Accumulation in the Humus Layer

Soil microorganisms play an important role in the mobilization of phosphorus (P), and these activities may be beneficial for plant P utilization. We investigated the effects on microbial P availability of different combinations of aluminum and iron (Al + Fe) concentrations and different P pools in humus soils from boreal forest ecosystems. We measured respiration rates in laboratory incubations before and after additions of glucose plus (NH₄)₂SO₄ (Glu+N), with or without a small dose of KH₂PO₄. Glu+N was added in excess so that the availability of the inherent soil P would be growth-limiting for the microorganisms. The exponential increases observed in microbial growth after substrate additions (Glu+N) was slower for humus soils with high Al+Fe concentrations than for humus soils with low Al+Fe concentrations. Adding a small dose of KH₂PO₄ to humus soils with high Al+Fe concentrations did, however, increase the exponential growth, measured as the slope of the log-transformed respiration rates, by more than 200%. By contrast, the average increase in exponential growth was only 6% in humus soils with low Al+Fe concentrations. Almost eight times more carbon dioxide (CO₂) was evolved between the substrate additions and the point at which the respiration rate reached 1 mg CO₂ h^–1 for soils with high Al+Fe concentrations compared to humus soils with low Al+Fe concentrations. The amount of CO₂ evolved was positively related to the Al+Fe concentration of the humus soils (r ² = 0.86, P < 0.001), whereas the slope was negatively related to Al+Fe concentration (r ² = 0.70, P < 0.001). Easily available P forms were negatively related to the Al+Fe concentration, whereas organic P showed a strong positive relationship to Al+Fe (r ² = 0.85, P < 0.001), suggesting that other forms of P, as well as inorganic P, are affected by the increased sorption capacity. The results indicate that P mobilization by microorganisms is affected by the presence of sorption sites in the humus layer, and that this capacity for sorption may relate not only to phosphate but also to organic P compounds.     

Simulation and Analysis of the Effect of a Spruce Budworm Outbreak on Carbon Dynamics in Boreal Forests of Quebec

Ecosystems - In a climate change context, the sequestration of atmospheric carbon (C) in forests is key for achieving emission targets. It is thus critical to understand how large-scale...     

Patterns of Carbon, Nitrogen and Phosphorus Dynamics in Decomposing Foliar Litter in Canadian Forests

We examined the patterns of nitrogen (N) and phosphorus (P) gain, retention or loss in ten foliar tissues in a litterbag experiment over 6 years at 18 upland forest sites in Canada, ranging from subarctic to cool temperate. N was usually retained in the decomposing litter until about 50% of the original C remained. The peak N content in the litter was observed at between 72 and 99% of the original C remaining, with C:N mass quotients between 37 and 71 (mean 55). The rate of N release from the litters was not related to the original N concentration, which may be associated with the generally narrow range (0.59–1.28% N) in the litters. P was immediately lost from all litters, except beech leaves, with critical litter C:P mass quotients for P release being in the range 700–900. The rate of P loss was inversely correlated with the original litter P concentration, which ranged from 0.02 to 0.13%. The soil underlying the litterbags influenced the pattern of N and P dynamics in the litters; there were weak correlations between the N and P remaining at 60% C remaining in the litters and the C:N and C:P quotients of the surface layer of the soil. There was a trend for higher N and P retention in the litter at sites with lower soil C:N and N:P quotients, respectively. Although there was a large variation in C:N, C:P and N:P quotients in the original litters (29–83, 369–2122 and 5–26, respectively), and some variation in the retention or loss of N and P in the early stages of decomposition, litters converged on C:N, C:P and N:P quotients of 30, 450 and 16, when the C remaining fell below 30%. These quotients are similar to that found in the surface organic matter of these ecosystems.