Efficient nitrogen alkylation with carbohydrates

Efficient nitrogen alkylation of various primary and secondary amines, including cyclic, heterocyclic and alkaloid type amines, with a sugar oxetane 3,5-anhydro-1,2-O-cyclohexylidene-alpha-D-xylofuranose is described. As a result, 5-amino-5-deoxy derivatives of xylofuranose were obtained in good yields.     

Nitrogenous excretion in the Antarctic plunderfish

The nitrogenous excretion rates (total ammonia nitrogen, urea, and primary amines) of plunderfish Harpagifer antarcticus were related significantly to length and to wet mass (mass exponents of 0·94, 1·01, 1·07 and 0·93 for total ammonia nitrogen, urea, primary amines, and total nitrogen, respectively). The routine total ammonia excretion rates [22·23 & 2·0 mg N kg⁻¹ day⁻¹ (mean±S.E.)] of plunderfish measured in Antarctica are 10–69% lower than those of comparable non-polar species. Plunderfish are ammonotelic, but the proportion of the total nitrogenous waste attributable to each category was variable between individuals. On average (ranges in parentheses), total ammonia nitrogen, urea, and primary amines accounted for c .82 (57–97), 13 (2–28), and 5 (0·6–22)%, respectively, of the total nitrogen excreted. Polar fish differ from their non-polar relatives only in the rate, and not the nature, of their nitrogenous waste excretion processes.     

Utilization of amines by yeasts

461 Strains of the yeast collection of the Centraalbureau voor Schimmelcultures (CBS) were screened for their ability to utilize 9 different amines as a sole carbon and energy source and/or as nitrogen source. A miniaturized technique with microtiter plates was used. None of the primary and methylated amines tested (i.e. methylamine, dimethylamine, trimethylamine, tetramethylammonium chloride, choline, ethylamine, propylamine, butylamine and benzylamine) were utilized as a carbon and energy source, although the majority of yeasts (86%) were able to utilize one or more of these compounds as a nitrogen source. The ability to utilize ethylamine and higher homologues occurred more frequently than the ability to utilize methylated amines. In almost all genera the utilization of primary and methylated amines was found, with utilizing and non-utilizing species occurring within a genus. The occurrence of specific assimilation patterns of amine utilization among yeasts and the inability of these organisms to utilize amines as a carbon and energy source is discussed.     

Unusual addition of amines to C-2 of vinyl sulfone-modified-beta-D-pent-2-enofuranosyl carbohydrates: synthesis of a new class of beta-anomeric 2-amino-2,3-dideoxy-D-threo-pentofuranosides

When 3-C-sulfonyl-pent-2-enofuranosides and 3-C-sulfonyl-hex-2-enofuranosides were reacted with primary and secondary amines, only the beta-anomeric methoxy group of the pent-2-enofuranoside did not cause any hindrance to incoming nitrogen nucleophiles. This resulted in the 'unusual' addition of amines, in which the diastereoselectivity of the reaction was overwhelmingly in favor of amino sugars of the D-arabino configuration. Selected products were desulfonylated to obtain a new class of beta-anomeric 2-amino-2,3-dideoxy-D-threo-pentofuranosides.     

Oxidation of dimethylamine and trimethylamine in methazotrophic yeasts by microsomal mono-oxygenases sensitive to carbon monoxide

Whole cells of Candida boidinii grown on di- or tri-methylamine as sole nitrogen source readily oxidized both amines. The oxidation was potently inhibited by carbon monoxide. Cell-free extracts required the presence of 20 μM FAD before mono-oxygenase activity with both amines could be demonstrated. NADH was a better electron donor than NADPH. Activity was present in cells grown on secondary and tertiary amines but not on primary amines, and was detected in a number of different yeasts. Enzyme activity could be sedimented at 187 000 x g, and was associated with NADPH-cytochrome c reductase activity. It is thus probably microsomal. Activity was inhibited by cyanide, mercaptoethanol, carbon monoxide and proadifen hydrochloride (SKF 525-A).     

Body nitrosation potential measured by a novel 15N breath test

Oxygenated nitrogen species, for example, the protonated form of nitrous acid (H2ONO+), dinitrogentrioxide (N2O3), dinitrogentetroxide (N2O4), or peroxynitrite (ONOO-), can react with amines to form molecular nitrogen. These reactions can occur spontaneously with primary aliphatic amines or via cytochrome P450 catalysed reactions with secondary amines. In principle measurements of the excretion of the molecular nitrogen generated by these reactions could be used as an index of the levels of oxygenated nitrogen compounds acting as nitrosating agents. To test this idea, [15N2]urea (3 mmol) was administered orally to five patients infected with Helicobacter pylori (as diagnosed by the [13C]urea breath test) and to four healthy volunteers. All participants ingested 3-mmol sodium nitrate as a precursor for NA 5 min before the ingestion of the nitrogen tracer. During the test the participants breathed 100% oxygen to increase the sensitivity of detection of endogenous molecular nitrogen. After the administration of [15N2]urea, the patients with H. pylori showed significantly increased 15N enrichments of exhaled N2, expressed as delta value (per 1000), compared with healthy volunteers (patients: 3.5 +/- 0.9 vs. volunteers: 1.3 +/- 0.4; p < .05). We speculate that the endogenous production of molecular nitrogen is a protective process controlling the body NO and nitrite levels. The 15N breath technique allows the noninvasive estimation of the body nitrosation and could indicate the health risk, possibly the oxidative stress status, caused by highly reactive oxygenated nitrogen species and carbenium ion intermediates.     

Broønsted analysis of aspartate aminotransferase via exogenous catalysis of reactions of an inactive mutant

Primary amines functionally replace lysine 258 by catalyzing both the 1,3-prototropic shift and external aldimine hydrolysis reactions with the inactive aspartate aminotransferase mutant K258A. This finding allows classical Brønsted analyses of proton transfer reactions to be applied to enzyme-catalyzed reactions. An earlier study of the reaction of K258A with cysteine sulfinate (Toney, M.D. & Kirsch, J.F., 1989, Science 243, 1485) provided a beta value of 0.4 for the 1,3-prototropic shift. The beta value reported here for the transamination of oxalacetate to aspartate is 0.6. The catalytic efficacy of primary amines is largely determined by basicity and molecular volume. The dependence of the rate constants for the reactions of K258A and K258M on amine molecular volume is nearly identical. This observation argues that the alkyl groups of the added amines do not occupy the position of the lysine 258 side chain in the wild type enzyme. Large primary C alpha and insignificant solvent deuterium kinetic isotope effects with amino acid substrates demonstrate that the amine nitrogen of the exogenous catalysts directly abstracts the labile proton in the rate-determining step.     

On the specificity of the folin and lowry reagents for amine derivatives.

Reactivities of several amine derivatives with the Folin and Lowry reagents were examined. Tertiary amines reacted with the Folin reagent to produce a blue color, and secondary amines having a 2-hydroxyethyl group reacted with the Folin reagent only in the presence of Cu²⁺, i.e., with the Lowry reagent. On the other hand, primary and quarternary amines and amine N-oxides produced no color with either reagent. Reactivities of tertiary amines were greatly influenced by the nature of the N-substituted groups, and the color yield of those forming stable chelate complexes with metals was strongly inhibited by the presence of Cu²⁺, indicating that the formation of a stable complex with Cu²⁺ reduces the reactivity of tertiary amino nitrogen. The requirement of Cu²⁺ for the color development with secondary amines having a 2-hydroxyethyl group may be due to the formation of weak chelate complex with Cu²⁺.     

Freezing in nematodes: The effects of variable water contents

During rehydration from the anhydrobiotic state, Aphelenchus avenae was unaffected by exposure to liquid nitrogen while its water content was below 0.26 mg H₂O/mg dry wt (21% H₂O). At water contents above 21% H₂O there was a rapid decline in survival to less than 10%.Nematodes with high water contents which were frozen and thawed before being plunged into water leaked primary amines to the medium faster than those with low water contents. But worms with any given water content showed a diminishing rate of leakage over time.Worms which had been frozen and thawed leaked primary amines at the same rate as an unfrozen control group when the water content of both groups was below 21% H₂O. At water contents above 21%, the unfrozen nematodes showed a decline in leakage while the frozen worms gradually increased their leakage rate.Leakage rates and survival of exposure to liquid nitrogen were not linearly related.Our data are consistent with the hypothesis that freezing damage in adult A. avenae is due to structural disruption by ice crystals.     

Oxidative nucleophilic substitution selectively produces cambinol derivatives with antiproliferative activity on bladder cancer cell lines

Methyltrioxorhenium mediated oxidative addition/elimination nucleophilic substitution yielded alkylamino and arylamino cambinol derivatives characterized by anti-proliferative activity against wild-type and p53 mutated MGH-U1 and RT112 bladder cancer cell lines. Some of the novel compounds showed an activity higher than that of the lead compound. The reaction was highly regioselective, affording for the first time a panel of C-2 cambinol substitution products. Aliphatic primary and secondary amines, and primary aromatic amines, were used as nitrogen centered nucleophiles. Surprisingly, the antiproliferative activity of C-2 substituted cambinol derivatives was not correlated to the induction of p53 protein, as evaluated by the analysis of the cell viability on wild-type and p53 mutated cancer cell lines, and further confirmed by western blot analyses. These data suggest that they exert their antiproliferative activity by a mechanism completely different from cambinol.     

NITROGEN EXCRETION IN THE ANTARCTIC LIMPET NACELLA CONCINNA (STREBEL, 1908)

Excretion of ammonia, urea and primary amines (assayed as fluorescamine-positivesubstances, FPS) was measured in the Antarctic limpet Nacellaconcinna. The mean contributions to overall excretion rate were89% ammonia, 8% urea and 3% FPS, although in some individualsurea formed almost 40% total excreted nitrogen and in othersprimary amines formed over 30%. Ammonia and urea excretion rateswere not correlated, suggesting the ureagenesis has a specificphysiological role and is not simply an alternative end-pointto ammonia. In starved limpets urea excretion at first increasedby at least x2, and then declined to low levels after 44 days.Ammonia excretion also increased, but only after 20 days, andthen stayed high until at least day 44. These different patternsconfirm the independent roles of ammonia and urea productionin Nacella. (Received 10 June 1993; accepted 25 August 1993)     

Amines for detection of dopamine by generation of hydrogen peroxide and peroxyoxalate chemiluminescence

A range of nitrogen-containing compounds (alkyl amines, piperazines, cyclohexylamines and nitrogen heterocyclics) were investigated for generation of hydrogen peroxide from dopamine and detection by peroxyoxalate chemiluminescence. Imidazole, ethyleneurea and allantoin among the nitrogen heterocyclic compounds tested generated hydrogen peroxide from dopamine following incubation at 60°C, pH 9.5–10.5, for 0–30 min. Imidazole was the most effective for generation of hydrogen peroxide, but imidazole derivatives with a primary amine side chain (histamine) or thiol (ethylenethiourea) were not effective. The presence of a ketone group (ethyleneurea, allantoin) did not hinder the reaction. Under optimal conditions (30 min incubation, 50 mmol/L imidazole) 10.5 nmol of dopamine could be detected. The cyclohexylamines tested produced low amounts of hydrogen peroxide (0.09–2.74% of light intensity with imidazole), and the piperazines and the alkyl amines tested produced no detectable hydrogen peroxide. Imidazole reacts with the phenolic groups of dopamine in a different manner from monoamine oxidase, and a reagent containing imidazole, ethyleneurea or allantoin was useful for non-enzymatic detection of dopamine by peroxyoxalate chemiluminescence.© John Wiley & Sons, Ltd.     

Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave

Movile Cave, Romania, is an unusual underground ecosystem that has been sealed off from the outside world for several million years and is sustained by non-phototrophic carbon fixation. Methane and sulfur-oxidising bacteria are the main primary producers, supporting a complex food web that includes bacteria, fungi and cave-adapted invertebrates. A range of methylotrophic bacteria in Movile Cave grow on one-carbon compounds including methylated amines, which are produced via decomposition of organic-rich microbial mats. The role of methylated amines as a carbon and nitrogen source for bacteria in Movile Cave was investigated using a combination of cultivation studies and DNA stable isotope probing (DNA-SIP) using ¹³C-monomethylamine (MMA). Two newly developed primer sets targeting the gene for gamma-glutamylmethylamide synthetase (gmaS), the first enzyme of the recently-discovered indirect MMA-oxidation pathway, were applied in functional gene probing. SIP experiments revealed that the obligate methylotroph Methylotenera mobilis is one of the dominant MMA utilisers in the cave. DNA-SIP experiments also showed that a new facultative methylotroph isolated in this study, Catellibacterium sp. LW-1 is probably one of the most active MMA utilisers in Movile Cave. Methylated amines were also used as a nitrogen source by a wide range of non-methylotrophic bacteria in Movile Cave. PCR-based screening of bacterial isolates suggested that the indirect MMA-oxidation pathway involving GMA and N-methylglutamate is widespread among both methylotrophic and non-methylotrophic MMA utilisers from the cave.     

Body nitrosation potential measured by a novel N breath test

Oxygenated nitrogen species, for example, the protonated form of nitrous acid (H₂ONO⁺), dinitrogentrioxide (N₂O₃), dinitrogentetroxide (N_2O4), or peroxynitrite (ONOO⁻), can react with amines to form molecular nitrogen. These reactions can occur spontaneously with primary aliphatic amines or via cytochrome P450 catalysed reactions with secondary amines. In principle measurements of the excretion of the molecular nitrogen generated by these reactions could be used as an index of the levels of oxygenated nitrogen compounds acting as nitrosating agents. To test this idea, [¹⁵N₂]urea (3 mmol) was administered orally to five patients infected with Helicobacter pylori (as diagnosed by the [¹³C]urea breath test) and to four healthy volunteers. All participants ingested 3-mmol sodium nitrate as a precursor for NA 5 min before the ingestion of the nitrogen tracer. During the test the participants breathed 100% oxygen to increase the sensitivity of detection of endogenous molecular nitrogen. After the administration of [¹⁵N₂]urea, the patients with H. pylori showed significantly increased ¹⁵N enrichments of exhaled N₂, expressed as δ value (‰), compared with healthy volunteers (patients: 3.5 ± 0.9 vs. volunteers: 1.3 ± 0.4; p < .05). We speculate that the endogenous production of molecular nitrogen is a protective process controlling the body NO and nitrite levels. The ¹⁵N breath technique allows the noninvasive estimation of the body nitrosation and could indicate the health risk, possibly the oxidative stress status, caused by highly reactive oxygenated nitrogen species and carbenium ion intermediates.     

Gas-liquid chromatography and mass spectrometry of biogenic amines and amphetamines as their isothiocyanate derivatives

A simple method for the preparation of volatile isothiocyanate derivatives of primary amines is described. This type of derivative has been used in the identification of primary amines in urinary samples by means of gas-liquid chromatography and mass spectrometry. The mass spectrometric fragmentations of isothiocyanate derivatives of various primary amines are discussed and compared to those of their pertrimethylsilylated counterparts.     

A Modified Regeneration Method for Streptomycete Protoplasts

The racemization of optically active imidazoline derivatives catalyzed by amines and alcohols was investigated. The racemization was effected by the catalysis of primary and secondary amines, but not by tertiary amines. In t-BuOH, imidazolines were racemized much more slowly than in primary alcohols. The mechanism through a pseudo-six-membered cyclic transition state was proposed for the racemization.     

The Possible Importance of Primary Amino Nitrogen in Nitrogen Regeneration by Coastal Marine Sediments in Buzzards Bay,Massachusetts

To investigate the role of primary amino nitrogen (PAN) in nitrogen regeneration by marine sediments, the distribution and fluxes of PAN in organic-rich coastal sediments off Massachusetts (USA) were investigated. Decreases with depth in the sediment of total organic carbon, organic nitrogen, and PAN contents indicate that organics with C to N ratios of about 6, such as primary amines, are selectively consumed. Near the sediment surface, dissolved PAN (DPAN) accumulates and supports a large DPAN flux into the water column and this flux greatly exceeds the inorganic nitrogen flux. Consumption of C, N, and PAN was investigated using diagenetic equations describing their exponentially decreasing distributions with depth and which included the effects of sediment mixing, sediment accumulation, and consumption, considered to be a first-order reaction rate. Calculations showed that the reaction rate constant for PAN was between 5.1 and 26.1 times faster than that for the utilizable organic N and the depth-integrated consumption of PAN accounted for between 8.6 and 43.9% of the N disappearance rate. These ranges are estimated when sediment accumulation dominates over sediment mixing (the lower values) and when mixing dominates over accumulation (the upper values). Although the magnitude of D is unknown, these calculations indicate that PAN, which comprises less than 2% of the organic N, has an important role in sedimentary nutrient dynamics because of its enhanced reactivity.     

Efficient synthesis of rhodamine conjugates through the 2'-position

Reaction of substrates containing primary amines with rhodamine 2'-esters cleanly produces fluorescent rhodamine 2'-amide conjugates at ambient temperature. Only primary amines react with the esters under these conditions. Chemoselectivity can thus be achieved in substrates containing different types of amines.     

Control of benzylamine oxidase activity in Kluyveromyces fragilis grown on primary amines as nitrogen source

Abstract After growth on a mixture of ammonium and either methylamine or n -butylamine as nitrogen sources, benzylamine oxidase activity in yeasts from a number of different genera was found to be repressed to a lesser extent by ammonium than was methylamine oxidase. Catalase activity was better repressed by ammonium with methylamine as the nitrogen source than with n -butylamine. During growth of Kluyveromyces fragilis on equimolar mixtures of ammonium and an amine as nitrogen sources, benzylamine oxidase synthesis began during the period of exclusive growth on ammonium, and a period of simultaneous use of both nitrogen sources was observed just before the ammonium was exhausted. Addition of ammonium to cultures growing on n -butylamine as nitrogen source had no immediate repressive effect on benzylamine oxidase or catalase synthesis. However, growth on limiting ammonium in the absence of amines did give rise to low levels of amine oxidase and derepression of catalase activity. It is concluded that benzylamine oxidase in yeasts is induced strongly by amines as well as being less strongly repressed by ammonium than methylamine oxidase.     

Studies on the reaction of fluorescamine with primary amines

Fluorescamine is a useful reagent for the fluorometric assay of primary amines. The extent of the reaction between fluorescamine and primary amines, as well as the fluorescence intensities of the resulting fluorophors depend on pH, solvent composition and reagent concentration. Optimum values for these variables further depend on the amine under study. The influence of these parameters on the fluorogenic reaction of representative amines, and on their fluorophoric derivatives has been investigated, and the results are reported here.