海绵硅蛋白研究进展

海绵是生物进化过程中最古老的多细胞动物,其中大部分能够利用二氧化硅在常温水环境下合成形状、大小和结构极为丰富的硅质骨骼。随着近年来人们发现其骨骼的基本组成单位骨针具有优异的光导性能和机械性能,海绵生物硅化过程及仿生纳米和微米硅质生物材料合成的研究成为生物技术和材料科学的热点。在海绵生物硅化过程中,一类被称为硅蛋白(Silicatein)的蛋白质表现出了特殊的催化活性,也因此得到了生物学家、化学家和材料学家的关注。以下将对硅蛋白的国际研究现状进行了评述,以期促进国内相关领域的研究。     

来源于海绵的纳米生物硅材料及其相关酶研究进展

水生生物海绵的纳米结构的硅质骨针及其相关酶,在微电子、光纤及生物医学等方面具有诱人的前景,硅生物技术研究的发展有望成为纳米生物技术的一个新亮点。简要综述了海绵骨针的结构、组成及其形态发生过程,骨针合成代谢相关酶——硅聚合酶、骨针分解代谢相关酶——硅分解酶基因的克隆及表达影响因子,海绵骨针硅材料及其相关酶的获得、体外催化活性及潜在应用。     

中国海表层沉积生物硅含量与硅藻丰度空间分布规律

生物硅是海洋硅循环及古海洋学的主要研究对象,主要由硅藻、放射虫、硅鞭藻和海绵骨针等硅质生物壳体组成.由于硅藻是海洋硅质生物以及海洋浮游植物群落的优势种群,故生物硅常被用作判断硅藻生产力甚至整个海洋初级生产力的重要指标.相对于硅藻的鉴定和统计分析,生物硅含量分析有其便利快捷的明显优势,然而生物硅组成的复杂性使其在现代海洋...     

海绵的分类、演化及其地质意义

本文简述了海绵动物的基本特征,比较了硅质海绵与钙质海绵在骨针及骨骼结构上的不同,认为骨针性质与硬体骨骼结构是海绵分类的主要依据。据此把海绵动物划分为普通海绵纲(Class Demospongea)、六射海绵纲(Class Hexactinellida)、钙质海绵纲(Class Calcispongiae)、异射海绵纲(Class Heteractinida)和硬骨海绵纲(Class Sclerospongiae),并进一步讨论了不同类别海绵在地史时期的分布及演化。提出海绵除可作为判别环境的标志外,还是重要的造礁生物。地史时期由海绵形成的成礁期有3次,它们与不同类型碳酸盐岩隆的生成及油气的聚集有密切关系。     

陕西镇巴早寒武世海绵骨针化石

作者对采自陕西省镇巴县下寒武统西蒿坪段和水井沱组下部碳酸盐岩地层的海绵骨针化石进行了研究。三叶虫及小壳化石的生物地层学资料表明西蒿坪段和水井沱组下段属于筇竹寺阶。化石经室内醋酸浸泡处理后获得,骨针化石保存较好、类型多样,其中属于六射海绵纲的骨针3类,普通海绵纲的骨针6类,分类未定的骨针1类(Nabaviellasp.);并详细地对各类骨针化石进行了描述。虽然普通海绵骨针类型多样,但六射海绵的骨针丰度远高于普通海绵。简要地探讨了海绵骨针的保存方式,对比和分析了西蒿坪段和水井沱组海绵骨针化石组成的差异。结合同时代产自皖南荷塘组和云南澄江动物群中特异保存的海绵软躯体化石资料,认为虽然海绵动物起源于新元古代末期,但躯体海绵化石和骨针化石都显示海绵动物的大辐射事件发生在早寒武世筇竹寺期。     

繁茂膜海绵硅聚合酶抗体制备及其在造骨细胞鉴别中的应用

为准确鉴别海绵造骨细胞,分别提取了繁茂膜海绵、多皱软海绵和澳大利亚厚皮海绵的硅聚合酶,以繁茂膜海绵硅聚合酶为抗原制备抗体,效价为1∶9600。SDSPAGE显示三种海绵硅聚合酶的亚基分布在28kD左右;建立竞争抑制性检测方法并结合WesternBlotting检测,显示该抗体可与繁茂膜海绵硅聚合酶特异性结合,且与另外两种海绵硅聚合酶几乎无交叉反应。利用该抗体对繁茂膜海绵组织和体外培养细胞进行免疫组织化学染色,均可显示造骨细胞的分布。结果提示硅聚合酶抗体可以特异性与繁茂膜海绵造骨细胞内的硅聚合酶结合,因此,该抗体可以用于造骨细胞的鉴别。     

贵州下寒武统牛蹄塘生物群中海绵新材料

描述了贵州下寒武统牛蹄塘生物群中海绵化石1新属(Zunyispongiagen.nov.),2新种(Zunyispongiatriangulariagen.etsp.nov.,Choiafanensis.sp.nov.),通过对其形态功能的分析和讨论证实了寒武纪早期海绵动物的骨骼是由细小骨针向粗大骨针演变,骨架结构从不稳定型向稳定型发展。     

钙质海绵之古生态

古生代生物礁中钙质海绵(纤维海绵、房室海绵、硬海绵)的生态位在中三叠世以后被生态竞争能力更强的六射珊瑚所占据.在古生代和中三叠世的钙质海绵礁上,0-10m深度内钙质海绵很发育.由于与钙藻共生,典型的造礁钙质海绵生活在透光带以内,并且在其上部更丰富.钙质海绵礁也会生长到破浪带内并受风浪的破坏而形成倒骨岩和骨屑岩.对古生代的钙质海绵礁而言,倒骨岩和骨屑岩形成于0-3m水深范围内,亮晶骨架岩形成于3-10m深度范围内,灰泥骨架岩形成于10-20m的水深,障积岩形成于20-30m的水深,潜障积岩形成于30-40m的水深.钙质海绵的生长形态与水深的关系与六射珊瑚与水深的关系一样:细枝状的钙质海绵生长在最浅的水中(相当于礁生长带的上部),在稍深的水中(相当于礁生长带的中部和下部)各种形态的海绵都会出现,在更深的水中可以出现特别大的、锥状的海绵.     

江苏南京淡水海绵新发现

本文报道了2种发现于江苏南京珍珠泉的淡水海绵新种,包括Eunapius rarus Zhao et Ma sp.nov和E.nanjingensis Zhao et Ma sp.nov.其中,E.rarus 首次显示Eunapius存在小骨针,为双尖带刺型(microsclere acan-thoxeas).另外,E....     

南极罗斯海表层沉积物中的放射虫组合分布及与其他硅质生物关系和环境生态意义

本文利用中国第31-33次南极科学考察在罗斯海陆架区采取的表层沉积物样品,研究了生物硅含量、硅质微体生物遗骸丰度分布特征和放射虫属种组合及其与海洋环境和生态的关系。研究显示,区域上生物硅含量是硅藻、放射虫和海绵骨针共同沉积的结果。其中,高的硅藻和放射虫丰度指示了罗斯海陆架区西部表层水初级生产力,而高的海绵骨针丰度可能与悬浮食物来源有关。主要放射虫属种的Q型因子分析将37个放射虫优势种归为四类属种组合。其中,以Antarctissa denticulata为优势种的组合代表寒冷的南极表层水;以Plectacantha oikiskos-Antarctissa(?) sp.1为优势种的组合指示水深和地形变化大、高初级生产力的近岸环境,代表罗斯海季节性海冰生成活跃的冰缘区;以Antarctissa strelkovi-Trisulcus borealis为优势种的组合中,A.strelkovi可能指示表层水硅酸盐浓度较高的浅水环境,而Trisulcus borealis和其它优势种可能受到多种环境因素的共同影响;以Lithomelissa setosa为优势种的组合主要受到上层冷暖水团混合的影响较大,可能指示侵入罗斯海陆架中部的变性绕极深层水。     

Formation of giant spicules in the deep-sea hexactinellid <Emphasis Type="Italic">Monorhaphis chuni</Emphasis> (Schulze 1904): electron-microscopic and biochemical studies

The siliceous sponge Monorhaphis chuni (Hexactinellida) synthesizes the largest biosilica structures on earth (3 m). Scanning electron microscopy has shown that these spicules are regularly composed of concentrically arranged lamellae (width: 3–10 μm). Between 400 and 600 lamellae have been counted in one giant basal spicule. An axial canal (diameter: ~2 μm) is located in the center of the spicules; it harbors the axial filament and is surrounded by an axial cylinder (100–150 μm) of electron-dense homogeneous silica. During dissolution of the spicules with hydrofluoric acid, the axial filament is first released followed by the release of a proteinaceous tubule. Two major proteins (150 kDa and 35 kDa) have been visualized, together with a 24-kDa protein that cross-reacts with antibodies against silicatein. The spicules are surrounded by a collagen net, and the existence of a hexactinellidan collagen gene has been demonstrated by cloning it from Aphrocallistes vastus. During the axial growth of the spicules, silicatein or the silicatein-related protein is proposed to become associated with the surface of the spicules and to be finally internalized through the apical opening to associate with the axial filament. Based on the data gathered here, we suggest that, in the Hexactinellida, the growth of the spicules is mediated by silicatein or by a silicatein-related protein, with the orientation of biosilica deposition being controlled by lectin and collagen. Carsten Eckert was previously with the Museum für Naturkunde, Invalidenstrasse 43, 10115 Berlin, Germany. The collagen sequence from Aphrocallistes vastus reported here, viz., [COL_APHRO] APHVACOL (accession number AM411124), has been deposited in the EMBL/GenBank data base. This work was supported by grants from the European Commission, the Deutsche Forschungsgemeinschaft, the Bundesministerium für Bildung und Forschung Germany (project: Center of Excellence BIOTECmarin), the National Natural Science Foundation of China (grant no. 50402023), and the International Human Frontier Science Program.     

Bioorganic/inorganic hybrid composition of sponge spicules: matrix of the giant spicules and of the comitalia of the deep sea hexactinellid Monorhaphis

The giant basal spicules of the siliceous sponges Monorhaphis chuni and Monorhaphis intermedia (Hexactinellida) represent the largest biosilica structures on earth (up to 3m long). Here we describe the construction (lamellar organization) of these spicules and of the comitalia and highlight their organic matrix in order to understand their mechanical properties. The spicules display three distinct regions built of biosilica: (i) the outer lamellar zone (radius: >300 microm), (ii) the bulky axial cylinder (radius: <75 microm), and (iii) the central axial canal (diameter: <2 microm) with its organic axial filament. The spicules are loosely covered with a collagen net which is regularly perforated by 7-10 microm large holes; the net can be silicified. The silica layers forming the lamellar zone are approximately 5 microm thick; the central axial cylinder appears to be composed of almost solid silica which becomes porous after etching with hydrofluoric acid (HF). Dissolution of a complete spicule discloses its complex structure with distinct lamellae in the outer zone (lamellar coating) and a more resistant central part (axial barrel). Rapidly after the release of the organic coating from the lamellar zone the protein layers disintegrate to form irregular clumps/aggregates. In contrast, the proteinaceous axial barrel, hidden in the siliceous axial cylinder, is set up by rope-like filaments. Biochemical analysis revealed that the (dominant) molecule of the lamellar coating is a 27-kDa protein which displays catalytic, proteolytic activity. High resolution electron microscopic analysis showed that this protein is arranged within the lamellae and stabilizes these surfaces by palisade-like pillars. The mechanical behavior of the spicules was analyzed by a 3-point bending assay, coupled with scanning electron microscopy. The load-extension curve of the spicule shows a biphasic breakage/cracking pattern. The outer lamellar zone cracks in several distinct steps showing high resistance in concert with comparably low elasticity, while the axial cylinder breaks with high elasticity and lower stiffness. The complex bioorganic/inorganic hybrid composition and structure of the Monorhaphis spicules might provide the blueprint for the synthesis of bio-inspired material, with unusual mechanical properties (strength, stiffness) without losing the exceptional properties of optical transmission.     

Bio-sintering processes in hexactinellid sponges: Fusion of bio-silica in giant basal spicules from Monorhaphis chuni

The two sponge classes, Hexactinellida and Demospongiae, comprise a skeleton that is composed of siliceous skeletal elements (spicules). Spicule growth proceeds by appositional layering of lamellae that consist of silica nanoparticles, which are synthesized via the sponge-specific enzyme silicatein. While in demosponges during maturation the lamellae consolidate to a solid rod, the lamellar organization of hexactinellid spicules largely persists. However, the innermost lamellae, near the spicule core, can also fuse to a solid axial cylinder. Similar to the fusion of siliceous nanoparticles and lamella, in several hexactinellid species individual spicules unify during sintering-like processes. Here, we study the different stages of a process that we termed bio-sintering, within the giant basal spicule (GBS) of Monorhaphis chuni. During this study, a major GBS protein component (27 kDa) was isolated and analyzed by MALDI-TOF-MS. The sequences were used to isolate and clone the encoding cDNA via degenerate primer PCR. Bioinformatic analyses revealed a significant sequence homology to silicatein. In addition, the native GBS protein was able to mediate bio-silica synthesis in vitro. We conclude that the syntheses of bio-silica in M. chuni, and the subsequent fusion of nanoparticles to lamellae, and finally to spicules, are enzymatically-driven by a silicatein-like protein. In addition, evidence is now presented that in hexactinellids those fusions involve sintering-like processes.     

Silicatein expression in the hexactinellid Crateromorpha meyeri: the lead marker gene restricted to siliceous sponges

The siliceous spicules of sponges (Porifera) are synthesized by the enzyme silicatein. This protein and its gene have been identified so far in the Demospongiae, e.g., Tethya aurantium and Suberites domuncula. In the Hexactinellida, the second class of siliceous sponges, the mechanism of synthesis of the largest bio-silica structures on Earth remains obscure. Here, we describe the morphology of the spicules (diactines and stauractines) of the hexactinellid Crateromorpha meyeri. These spicules are composed of silica lamellae concentrically arranged around a central axial canal and contain proteinaceous sheaths (within the siliceous mantel) and proteinaceous axial filaments (within the axial canal). The major protein in the spicules is a 24-kDa protein that strongly reacts with anti-silicatein antibodies in Western blots. Its cDNA has been successfully cloned; the deduced hexactinellid silicatein comprises, in addition to the characteristic catalytic triad amino acids Ser-His-Asn and the "conventional" serine cluster, a "hexactinellid C. meyeri-specific" Ser cluster. We show that anti-silicatein antibodies react specifically with the proteinaceous matrix of the C. meyeri spicules. The characterization of silicatein at the genetic level should contribute to an understanding of the molecular/biochemical mechanism of spiculogenesis in Hexactinellida. These data also indicate that silicatein is an autapomorphic molecule common to both classes of siliceous sponges.     

Novel photoreception system in sponges? Unique transmission properties of the stalk spicules from the hexactinellid Hyalonemasieboldi

Sponges (phylum Porifera) of the classes Hexactinellida and Demospongiae possess a skeleton composed of siliceous spicules, which are synthesized enzymatically. The longest spicules are found among the Hexactinellida, with the stalk spicules (length: 30 cm; diameter: 300 microm) of Hyalonema sieboldi as prominent examples. These spicules are constructed around a central axial filament, which is formed by approximately 40 siliceous layers. The stratified spicules function as optical glass fibers with unique properties. If free-spaced coupled with a white light source (WLS), the entire fiber is illuminated. Special features of the light transmission: (i) only wavelengths between 615 and 1310 nm can pass through the fibers and (ii) light below wavelengths of 615 nm and above 1310 nm is completely cut-off. The transmission efficiency is around 60% (measured at 1080-1100 nm [length of the fiber: 5 cm]). The spicules acts as sharp high- and low-pass filters, suggesting that these silica-based fibers might be involved in a photoreception system. This assumption is supported by the finding that sponges are provided with a bioluminescent system. It is hypothesized that the spicules/siliceous fibers might be involved in a photoreception system in these animals.     

Axial growth of hexactinellid spicules: formation of cone-like structural units in the giant basal spicules of the hexactinellid Monorhaphis

The glass sponge Monorhaphis chuni (Porifera: Hexactinellida) forms the largest bio-silica structures on Earth; their giant basal spicules reach sizes of up to 3 m and diameters of 8.5 mm. Previously, it had been shown that the thickness growth proceeds by appositional layering of individual lamellae; however, the mechanism for the longitudinal growth remained unstudied. Now we show, that the surface of the spicules have towards the tip serrated relief structures that are consistent in size and form with the protrusions on the surface of the spicules. These protrusions fit into the collagen net that surrounds the spicules. The widths of the individual lamellae do not show a pronounced size tendency. The apical elongation of the spicule proceeds by piling up cone-like structural units formed from silica. As a support of the assumption that in the extracellular space silicatein(-like) molecules exist that associate with the external surface of the respective spicule immunogold electron microscopic analyses were performed. With the primmorph system from Suberites domuncula we show that silicatein(-like) molecules assemble as string- and net-like arrangements around the spicules. At their tips the silicatein(-like) molecules are initially stacked and at a later stay also organized into net-like structures. Silicatein(-like) molecules have been extracted from the giant basal spicule of Monorhaphis. Applying the SDS–PAGE technique it could be shown that silicatein molecules associate to dimers and trimers. Higher complexes (filaments) are formed from silicatein(-like) molecules, as can be visualized by electron microscopy (SEM). In the presence of ortho-silicate these filaments become covered with 30–60 nm long small rod-like/cuboid particles of silica. From these data we conclude that the apical elongation of the spicules of Monorhaphis proceeds by piling up cone-like silica structural units, whose synthesis is mediated by silicatein(-like) molecules.     

Analysis of the axial filament in spicules of the demosponge Geodia cydonium: different silicatein composition in microscleres (asters) and megascleres (oxeas and triaenes)

The skeleton of the siliceous sponges (Porifera: Hexactinellida and Demospongiae) is supported by spicules composed of bio-silica. In the axial canals of megascleres, harboring the axial filaments, three isoforms of the enzyme silicatein (-alpha, -beta and -gamma) have been identified until now, using the demosponges Tethya aurantium and Suberites domuncula. Here we describe the composition of the proteinaceous components of the axial filament from small spicules, the microscleres, in the demosponge Geodia cydonium that possesses megascleres and microscleres. The morphology of the different spicule types is described. Also in G. cydonium the synthesis of the spicules starts intracellularly and they are subsequently extruded to the extracellular space. In contrast to the composition of the silicateins in the megascleres (isoforms: -alpha, -beta and -gamma), the axial filaments of the microscleres contain only one form of silicatein, termed silicatein-alpha/beta, with a size of 25kDa. Silicatein-alpha/beta undergoes three phosphorylation steps. The gene encoding silicatein-alpha/beta was identified and found to comprise the same characteristic sites, described previously for silicateins-alpha or -beta. It is hypothesized, that the different composition of the axial filaments, with respect to silicateins, contributes to the morphology of the different types of spicules.     

Formation of siliceous spicules in the marine demosponge <Emphasis Type="Italic">Suberites domuncula</Emphasis>

The siliceous skeleton of demosponges is constructed of spicules. We have studied the formation of spicules in primmorphs from Suberites domuncula. Scanning electron microscopy and transmission electron-microscopical (TEM) analyses have revealed, in the center of the spicules, an axial canal that is 0.3–1.6 m wide and filled with an axial filament. This filament is composed of the enzyme silicatein, which synthesizes the spicules. TEM analysis has shown that spicule formation starts intracellularly and ends extracellularly in the mesohyl. At the initial stage, the axial canal is composed only of silicatein, whereas membranous structures and fibrils (10–15 nm in width) can later also be identified, suggesting that intracellular components protrude into the axial canal. Antibodies against silicatein have been applied for Western blotting; intracellularly, silicatein is processed to the mature form (24 kDa), whereas the pro-enzyme with the propeptide (33 kDa) is detected extracellularly. Silicatein undergoes phosphorylation at five sites. Immunohistological analysis has shown that silicatein exists in the axial canal (axial filament) and on the surface of the spicules, suggesting that they grow by apposition. Finally, we have demonstrated that the enzymic reaction of silicatein is inhibited by anti-silicatein antibodies. These data provide, for the first time, a comprehensive outline of spicule formation.This work was supported by grants from the European Commission (SILIBIOTEC), the Deutsche Forschungsgemeinschaft, the Bundesministerium für Bildung und Forschung Germany (project: Center of Excellence BIOTECmarin) and the International Human Frontier Science Program.     

Spicule structure and affinities of the Late Ordovician hexactinellid‐like sponge Cyathophycus loydelli from the Llanfawr Mudstones Lagerstätte,Wales

Exceptionally well‐preserved specimens of the reticulosan sponge Cyathophycus loydelli from the Sandbian (Late Ordovician) Llanfawr Mudstones Formation of Llandrindod, Waes, UK, have been examined using scanning electron microscopy (SEM). The specimens include exquisitely detailed pyritized spicules, and granular pyritization of surrounding soft tissues. Spicules frequently show axial canals of diameter similar to those of modern siliceous sponges, with hexagonal symmetry typical of modern demosponges rather than hexactinellids. In one case, the axial filament is also preserved. The largest spicules (ray diameter >20 μm) show a complex structure, with a laminar external region similar to that of the extant hexactinellid Monorhaphis. Some spicules preserve sub‐micron detail of the spicule surface, resembling the reticulate collagenous sheath of Monorhaphis. The hexagonal symmetry of the canal confirms that at least some Reticulosa are not crown‐group hexactinellids, but stem‐group Hexactinellida or Demospongea, or stem‐group Silicea. This suggests that a square canal is a sufficient diagnostic feature of total‐group Hexactinellida, but that hexagonal canals were more widely distributed among Early Silicea and were probably not restricted to demosponges. Alternatively, comparison with the structure of modern verongiid fibres suggests that these may be homologous with the outer layers of Cyathophycus spicules, and Cyathophycus may instead be a stem‐group demosponge. The preserved detail of the surface layer shows that pyritization can preserve certain material with extraordinarily fine resolution.     

Silicateins, silicatein interactors and cellular interplay in sponge skeletogenesis: formation of glass fiber-like spicules

Biomineralization processes are characterized by controlled deposition of inorganic polymers/minerals mediated by functional groups linked to organic templates. One metazoan taxon, the siliceous sponges, has utilized these principles and even gained the ability to form these polymers/minerals by an enzymatic mechanism using silicateins. Silicateins are the dominant protein species present in the axial canal of the skeletal elements of the siliceous sponges, the spicules, where they form the axial filament. Silicateins also represent a major part of the organic components of the silica lamellae, which are cylindrically arranged around the axial canal. With the demosponge Suberites domuncula as a model, quantitative enzymatic studies revealed that both the native and the recombinant enzyme display in vitro the same biosilica-forming activity as the enzyme involved in spicule formation in vivo. Monomeric silicatein molecules assemble into filaments via fractal intermediates, which are stabilized by the silicatein-interacting protein silintaphin-1. Besides the silicateins, a silica-degrading enzyme silicase acting as a catabolic enzyme has been identified. Growth of spicules proceeds in vivo in two directions: first, by axial growth, a process that is controlled by evagination of cell protrusions and mediated by the axial filament-associated silicateins; and second, by appositional growth, which is driven by the extraspicular silicateins, a process that provides the spicules with their final size and morphology. This radial layer-by-layer accretion is directed by organic cylinders that are formed around the growing spicule and consist of galectin and silicatein. The cellular interplay that controls the morphogenetic processes during spiculogenesis is outlined.