Potential of phenolic compounds from pomegranate (Punica granatum L.) by-product with significant antioxidant and therapeutic effects: A narrative review

The wealth of epidemiological evidence in the scientific world underscores the possibility that a plant-based diet can reduce the prevalence of common diseases such as diabetes, cardiovascular disease, cancer, and stroke. The therapeutic effects of plant sources are partly explained by phenolic secondary metabolites or polyphenolic compounds. Therefore, polyphenolic compounds, which are widely distributed in plants, are of great interest for the development of effective specific drugs with antioxidant and anti-inflammatory effects. Moreover, polyphenol compounds have no harmful effects due to their natural biocompatibility and safety. Numerous studies have highlighted the potential of some industrial food wastes from plant material processing, including apple peels and mashed potatoes, grape skins, tomato and carrot peels, pomegranate peels and seeds, and many others. These byproducts are considered low-cost sources of natural biological compounds, including antioxidants, which have beneficial effects on human health.The polyphenol complex of pomegranate peel (Punica granatum L.), which makes up half of the pomegranate fruit, has more pronounced antioxidant and anti-inflammatory properties than other parts. And the most important active components of pomegranate peel, which are found only in this plant, are punicalagin, followed by ellagic acid and gallic acid. It is known that these polyphenolic compounds of pomegranate peel have the most pronounced therapeutic effect. Several studies have shown the protective effect of ellagic acid, punicalagin, against oxidative stress damage caused by free radicals. The potential of pomegranate peel as an antioxidant and therapeutic component in various biological systems is high, according to scientific sources.However, despite extensive research in recent years, a review of sources has shown that there is insufficient evidence to support the therapeutic effects of polyphenolic compounds from pomegranate peels. The role of pomegranate peel polyphenolic compounds, including flavonoids, as antioxidants in various biological systems also requires further research. Of particular importance are the mechanisms by which antioxidants influence the cellular response against oxidative stress. The purpose of this review was to report our current knowledge of plant polyphenolic compounds and their classification, and to evaluate the potential of phenolic compounds from pomegranate peels with significant antioxidant and therapeutic effects.     

An integrated database of flavonoids

Flavonoids are polyphenolic compounds that occur ubiquitously in foods of plant origin. Some of these molecules exhibit various physiological activities. Among existing drugs, there are a huge number of compounds bearing a flavonoid-related skeleton. Because of the relevance for pharmaceutical research, it would be beneficial to collect these compounds into a database. Recently, various databases of chemicals were compiled to help biological and/or chemical research, but no comprehensive database of flavonoids with chemical structures and physicochemical parameters, supposedly related to their activity, is available yet. The aim of this research was to merge the information about flavonoids of plant origin and flavonoids used as medicines into a database. Moreover, predictions of activities against various targets were performed using a virtual screening procedure to demonstrate a possible application of the database for pharmaceutical research.     

Biotechnology of flavonoids and other phenylpropanoid-derived natural products. Part I: Chemical diversity, impacts on plant biology and human health

Plant natural products derived from phenylalanine and the phenylpropanoid pathway are impressive in their chemical diversity and are the result of plant evolution, which has selected for the acquisition of large repertoires of pigments, structural and defensive compounds, all derived from a phenylpropanoid backbone via the plant-specific phenylpropanoid pathway. These compounds are important in plant growth, development and responses to environmental stresses and thus can have large impacts on agricultural productivity. While plant-based medicines containing phenylpropanoid-derived active components have long been used by humans, the benefits of specific flavonoids and other phenylpropanoid-derived compounds to human health and their potential for long-term health benefits have been only recognized more recently. In this part of the review, we discuss the diversity and biosynthetic origins of phenylpropanoids and particularly of the flavonoid and stilbenoid natural products. We then review data pertaining to the modes of action and biological properties of these compounds, referring on their effects on human health and physiology and their roles as plant defense and antimicrobial compounds. This review continues in Part II discussing the use of biotechnological tools targeting the rational reconstruction of multienzyme pathways in order to modify the production of such compounds in plants and model microbial systems for the benefit of agriculture and forestry.     

Antimicrobial aromatic polyketides: a review of their antimicrobial properties and potential use in plant disease control

Aromatic polyketides are secondary metabolites widely found in bacteria, fungi, and plants, which are well-known for their diverse chemical structures and biological functions. The structural diversity of aromatic polyketides arises from a series of enzymatic modifications of the linear poly-β-ketone intermediates during biosynthesis. Their versatile bioactivities are exemplified by reports of their use as antibacterials, antifungals, antivirals, and antiparasitics. Despite many reports on the antimicrobial nature of aromatic polyketides, their potential use as plant disease control agents has still not been systematically explored and discussed. This review highlights examples of the use of aromatic polyketides as plant disease control agents and discusses their function and merits as agrochemicals.     

Molecular aspects of nitrogen mobilization and recycling in trees

Plants have developed a variety of molecular strategies to use limiting nutrients with a maximum efficiency. N assimilated into biomolecules can be released in the form of ammonium by plant metabolic activities in various physiological processes such as photorespiration, the biosynthesis of phenylpropanoids or the mobilization of stored reserves. Thus, efficient reassimilation mechanisms are required to reincorporate liberated ammonium into metabolism and maintain N plant economy. Although the biochemistry and molecular biology of ammonium recycling in annual herbaceous plants has been previously reported, the recent advances in woody plants need to be reviewed. Moreover, it is important to point out that N recycling is quantitatively massive during some of these metabolic processes in trees, including seed germination, the onset of dormancy and resumption of active growth or the biosynthesis of lignin that takes place during wood formation. Therefore, woody plants constitute an excellent system as a model to study N mobilization and recycling. The aim of this paper is to provide an overview of different physiological processes in woody perennials that challenge the overall plant N economy by releasing important amounts of inorganic N in the form of ammonium.     

Sesquiterpene Lactones: More Than Protective Plant Compounds With High Toxicity

Sesquiterpene lactones (STLs) constitute a large group of secondary metabolites that are widely distributed in several angiosperm plant families and a few bryophytes, including liverworts. These metabolites are particularly diversified in the family Asteraceae, in which more than 5,000 compounds have been reported so far. In addition to their pharmacological importance and potential therapeutic applications, most STLs display a wide range of protective activities in plants, including acting as anti-herbivory and antimicrobial substances or inhibiting growth of competing plants. These activities are mainly related to their characteristic α,β-unsaturated structural elements, which can participate in Michael-type additions with biological nucleophiles that contain sulfhydryl groups. Supporting the protective roles of STLs, they are mainly located in glandular trichomes of aerial parts because the highly nonspecific toxicity of such compounds necessitates compartmentalization to prevent autotoxicity. However, STLs have also been reported in other aerial and underground organs, where they are assumed to exhibit other biological activities. Recent studies have suggested that these metabolites not only display protective activities due to toxicity but also play key physiological roles in mediating rhizosphere communication among plants, soil microorganisms and plant parasites. STLs have been directly implicated in plant phototropism, resulting in differential growth of a plant organ due to auxin inhibition when accumulated in response to a light stimulus. This review therefore not only highlights the protective roles of STLs in producing plants but also explores the physiological roles of these metabolites, thus providing insights for new research approaches for understanding the roles of STLs in plants and their potential future applications.     

Healthy and unhealthy plants: The effect of stress on the metabolism of Brassicaceae

Brassicaceae plants are one of the most popular vegetables consumed all over the world and considered to be a good source of bioactive phytochemicals. Additionally, Brassica species and varieties are increasingly becoming a research model in plant science, as a consequence of the importance of their primary and secondary metabolites. Plant interaction with environmental stress factors including animals and insects herbivory, pathogens, metal ions, light, among others, is known to lead to the activation of various defense mechanisms resulting in a qualitative and/or quantitative change in plant metabolite production. Pre-harvest and/or post-harvest conditions are also known to affect this, since plants produce signaling molecules (e.g. salicylic acid, jasmonic acid, etc.) that cause a direct or indirect activation of metabolic pathways. That ultimately affects the production of phytochemicals, such as carbohydrates (sucrose and glucose), amino acids, phenolics (phenylpropanoids and flavonoids) and glucosinolates. These phytochemicals have diverse applications due to their antimicrobial, antioxidant and anti-carcinogenic properties, but on the other hand these compounds or their breakdown products can act as anti-nutritional factors in diet. In this review we report a wide range of the stress-induced metabolic responses in the Brassica plants commonly used for human consumption.     

Plant Volatiles: Recent Advances and Future Perspectives

Volatile compounds act as a language that plants use for their communication and interaction with the surrounding environment. To date, a total of 1700 volatile compounds have been isolated from more than 90 plant families. These volatiles, released from leaves, flowers, and fruits into the atmosphere and from roots into the soil, defend plants against herbivores and pathogens or provide a reproductive advantage by attracting pollinators and seed dispersers. Plant volatiles constitute about 1% of plant secondary metabolites and are mainly represented by terpenoids, phenylpropanoids/benzenoids, fatty acid derivatives, and amino acid derivatives. In this review we focus on the functions of plant volatiles, their biosynthesis and regulation, and the metabolic engineering of the volatile spectrum, which results in plant defense improvement and changes of scent and aroma properties of flowers and fruits.     

Plant volatiles as method of communication

Plants emit volatile compounds that can act as a communication method to insects, neighboring plants and pathogens. Plants respond to leaf and root damage by herbivores and pathogens by emitting these compounds. The volatile compounds can deter the herbivores or pathogens directly or indirectly by attracting their natural enemies to kill them. The simultaneous damage of plants by herbivores and pathogens can influence plant defense. The induced plant volatiles can also make neighboring plants ready for defense or induce defense in parts distant from the damaged area of the same plant. Belowground root herbivory can alter the defense response to aboveground leaf herbivory. In addition, most plants normally emit volatile compounds from their flowers that directly attract foraging mutualistic insects for nectar, which in turn perform the very important function of pollination for subsequent reproduction. The volatile compounds emitted from the floral and vegetative parts of plants belong to three main classes of compounds: terpenoids, phenylpropanoids/benzenoids, and C6-aldehydes (green-leaf volatiles). The volatile phytohormones methyl salicylate and methyl jasmonate serve as important signaling molecules for communication purposes, and interact with each other to optimize the plant defense response. Here we discuss and integrate the current knowledge on all types of communication between plants and insects, neighboring plants and pathogens that are mediated through plant volatiles.     

Quo vadis plant hormone analysis?

Plant hormones act as chemical messengers in the regulation of myriads of physiological processes that occur in plants. To date, nine groups of plant hormones have been identified and more will probably be discovered. Furthermore, members of each group may participate in the regulation of physiological responses in planta both alone and in concert with members of either the same group or other groups. The ideal way to study biochemical processes involving these signalling molecules is ‘hormone profiling’, i.e. quantification of not only the hormones themselves, but also their biosynthetic precursors and metabolites in plant tissues. However, this is highly challenging since trace amounts of all of these substances are present in highly complex plant matrices. Here, we review advances, current trends and future perspectives in the analysis of all currently known plant hormones and the associated problems of extracting them from plant tissues and separating them from the numerous potentially interfering compounds.     

虫害诱导挥发物的生态调控功能

虫害诱导挥发物（herbivore-induced plant volatiles, HIPVs）是植物受害虫胁迫后释放的挥发性物质,是植物与周围环境进行信息交流的媒介。环境中的天敌、害虫和植物通过感知HIPVs所携带的信息,对各自的行为或生理生化反应做出相应的调整。介绍了挥发物的种类及主要的生物合成途径,概括了影响天敌依据HIPVs搜寻寄主和猎物的主要因素。综述了这类挥发性物质对植食性昆虫寄主选择或产卵行为的影响,介绍了植物地上部分和地下部分受害后对彼此间接防御的影响,讨论了多种害虫加害同种植物后对天敌搜寻猎物或寄主行为的影响。另外,作为损伤信号,HIPVs还能诱导同株植物未受害部位和邻近植株的防御反应。最后,对HIPVs在害虫防治中的应用现状及前景作了介绍和讨论。     

Chlorogenic Acid Metabolism: The Evolution and Roles in Plant Response to Abiotic Stress

During the evolution, plants acquired the ability to synthesize different phenylpropanoid compounds like chlorogenic acid (CGA), which plays vital roles in resistance mechanisms to abiotic stresses. These environmental factors, including heavy metal, cold, heat, ultraviolet (UV) light, drought, and salinity affect the plant physiological processes, resulting in massive losses of agriculture production. As plants evolve from green algae to bryophytes, ferns, gymnosperms and angiosperms, phenylpropanoids are produced and accumulated in different tissues, giving the plant the capacity to counteract the harmful effects of the adverse environments. Studies have been performed on the metabolic evolution of rosmarinic acid, flavonoids and lignin, showing that the biosynthesis of phenylpropanoids begins in green algae until the emersion of genes found in angiosperms; however, the evolution of the CGA pathway has not yet been reviewed. We hypothesize that CGA could also be synthesized from algae to angiosperms. In the present review, the evolutionary analysis of CGA pathway and the function of this compound in plant tolerance to abiotic stresses are summarized. Bioinformatics analyzes were carried out on CGA-related genes across 37 plant species and revealed that the metabolic pathway starts in algae and gradually increases until it becomes complete in angiosperms. The key genes exhibited different expression patterns in stress and plant tissues. Interestingly, some genes accumulated rapidly during evolution and were more sensitive to environmental stresses, while others appeared only later in angiosperms. Further studies are needed to better understand the evolution of the CGA metabolic pathway in plants under environmentally stressed conditions.     

Modification of flavonoid biosynthesis in crop plants

Flavonoids comprise the most common group of polyphenolic plant secondary metabolites. In plants, flavonoids play an important role in biological processes. Beside their function as pigments in flowers and fruits, to attract pollinators and seed dispersers, flavonoids are involved in UV-scavenging, fertility and disease resistance. Since they are present in a wide range of fruits and vegetables, flavonoids form an integral part of the human diet. Currently there is broad interest in the effects of dietary polyphenols on human health. In addition to the potent antioxidant activity of many of these compounds in vitro, an inverse correlation between the intake of certain polyphenols and the risk of cardiovascular disease, cancer and other age related diseases has been observed in epidemiological studies. The potential nutritional effects of these molecules make them an attractive target for genetic engineering strategies aimed at producing plants with increased nutritional value. This review describes the current knowledge of the molecular regulation of the flavonoid pathway and the state of the art with respect to metabolic engineering of this pathway in crop plants.     

Analysis of Brassinosteroids in Plants

Brassinosteroids (BRs) are the polyhydroxylated plant hormones sharing a common resemblance with animal steroids. They are active even at very low concentrations and are implicated for their pleiotropic involvement in diverse physiological processes and defense strategies during stress in plants. These compounds are well apparent in the plant kingdom with higher amounts in juvenile tissues. A total of 62 steroidal compounds have been identified so far. Keeping their significance in mind, researchers not only have worked extensively on their isolation, but also they were synthesizing their synthetic isomers. Different analytical techniques like HPLC, GC-MS, LC-MS/MS, UPLC-MS/MS, and bioassay-based methods have been used for their isolation, detection, and characterization from composite plant materials. Therefore, this review provides comprehensive information to the readers intending to isolate and characterize BRs, using either laborious techniques or modern-day more efficient methods.     

Carotenoid hydroxylation--P450 finally!

Cytochrome P450 monooxygenases are involved in the biosynthesis of various compounds in plants such as phenylpropanoids, lipids and phytohormones. Hydroxylation of the carotenoid epsilon-ring is an essential reaction for the formation of lutein, the most abundant carotenoid in photosynthetic tissues. Recently, Li Tian and colleagues reported that a new P450 is responsible for this reaction. This discovery not only adds to the list of various functions of plant cytochrome P450s but also identifies one of the missing pieces of the puzzle of carotenoid biosynthesis.     

海绵体动物中trans-AT聚酮合成酶来源的聚酮化合物的生物合成

海绵体动物分离到的聚酮类化合物很多是由其共生或附生微生物体内的trans-AT聚酮合成酶催化产生的。利用宏基因组技术克隆具有生物活性的聚酮化合物的生物合成基因簇,不但能阐明活性化合物的生物合成路径,而且可以通过异源表达获得目标化合物。本文综述了海绵体动物来源的trans-AT聚酮合成酶产生的聚酮化合物生物合成及其基因簇的研究进展。     

Roles of glycine betaine and proline in improving plant abiotic stress resistance

Glycine betaine (GB) and proline are two major organic osmolytes that accumulate in a variety of plant species in response to environmental stresses such as drought, salinity, extreme temperatures, UV radiation and heavy metals. Although their actual roles in plant osmotolerance remain controversial, both compounds are thought to have positive effects on enzyme and membrane integrity along with adaptive roles in mediating osmotic adjustment in plants grown under stress conditions. While many studies have indicated a positive relationship between accumulation of GB and proline and plant stress tolerance, some have argued that the increase in their concentrations under stress is a product of, and not an adaptive response to stress. In this article, we review and discuss the evidence supporting each of these arguments. As not all plant species are capable of natural production or accumulation of these compounds in response to stress, extensive research has been conducted examining various approaches to introduce them into plants. Genetically-engineered plants containing transgenes for production of GB or proline have thus far faced with the limitation of being unable to produce sufficient amounts of these compounds to ameliorate stress effects. An alternative “shot-gun” approach of exogenous application of GB or proline to plants under stress conditions, however, has gained some attention. A review of the literature indicates that in many, but not all, plant species such applications lead to significant increases in growth and final crop yield under environmental stresses. In this review article, numerous examples of successful application of these compounds to improve plant stress tolerance are presented. However, to streamline useful and economic applications of these compounds, further investigations are needed to determine the most effective concentrations and number of applications as well as the most responsive growth stage(s) of the plant. All these factors may vary from species to species. Furthermore, a better understanding of the mechanisms of action of exogenously applied GB and proline is expected to aid their effective utilization in crop production in stress environments.     

Microbial producers of plant growth stimulators and their practical use: A review

The ability of pro- and eukaryotic microorganisms to synthesize growth-stimulating phytohormones is reviewed, with emphasis on pathways of biosynthesis of these compounds and their effects on physiological and biochemical properties of the producers. Phytohormones are viewed as specific mediators in interactions between various organisms inhabiting the same ecological niche, the biological role of which is not limited to processes taking place in plants. In addition to setting forth theoretical aspects of this problem, the review underscores the need to utilize such producer microorganisms in plant cultivation and biotechnology.     

The Effects and Mechanisms of Flavonoids on Cancer Prevention and Therapy: Focus on Gut Microbiota

Flavonoids are a group of polyphenolic compounds which are ubiquitously found in plants and are consumed as part of the human diet in substantial amounts. The verification of flavonoids'' cancer chemopreventive benefits has led to a significant interest in this field. Gut microbiota includes a diverse community of microorganisms and has a close relationship with cancer development. Increasing evidence has indicated that flavonoids exert anticarcinogenic effects by reshaping gut microbiota. Gut microbiota can convert flavonoids into bioactive metabolites that possess anticancer activity. Here, we present a brief introduction to gut microbiota and provide an overview of the interplay between gut microbiota and cancer pathogenesis. We also highlight the crucial roles of flavonoids in preventing cancer based on their regulation of gut microbiota. This review would encourage research on the flavonoid-intestinal microbiota interactions and clinical trials to validate the chemotherapeutic potentials of targeting gut microbiota by dietary bioactive compounds.     

Secondary metabolites and plant/environment interactions: a view through Arabidopsis thaliana tinged glasses

Arabidopsis thaliana is a successful model plant for studying wide‐ranging topics including plant development, genetics and pathogen resistance. In addition, significant research has been conducted in the area of secondary metabolite biochemical genetics. The secondary metabolites in Arabidopsis include glucosinolates, terpenoids, phenylpropanoids, the alkaloid‐like camalexin, and other uncharacterized compounds. The genetic tools developed in studying secondary metabolite biochemistry are now being used to study how secondary metabolites control various biological processes. This includes compounds involved in plant/insect and plant/pathogen interactions, compounds preventing UV‐B damage, and compounds involved in hormone homeostasis. This review will describe what light Arabidopsis is shedding on the biological and ecological importance of specific secondary metabolites.