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1.

Background

Iris L. s.l. is one of the most diverse and well-known genera in the Asparagales, with approximately 250–300 circumscribed species and significant economic impact. The taxonomy of the genus has suffered dramatic changes in the last century, particularly in the last decades after the application of molecular techniques. As a result several contrasting systematic arrangements are currently available to taxonomists. Many genera that were split from Iris s.str. in the past, on the basis of morphology (e.g., Hermodactylus, Iridodictyum, Juno, Pardanthopsis, and Xiphion, among others), are now a priori re-included in a very widely circumscribed Iris s.l. (incl. Belamcanda). This resulted in a more heterogeneous genus that is more difficult to define on morphological grounds. Testing congruence between taxonomic treatments and the results of recent molecular studies of Iris has never been performed, mostly due to the lack of proper taxonomic context.

Results

We generated several conventional phylogenies for Iris & outgroups using extensive sampling of taxa (187) and characters (10 plastid loci). We demonstrate that the natural history of Iris, written either as conventional molecular phylogenies or, if viewing in the context of the comparative approach, as a nested most parsimonious hierarchy of patterns, appear to be fully congruent with the narrow taxonomical treatment of the genus, restricted to the rhizomatous “bearded” taxa. The resulting topologies place Belamcanda, Pardanthopsis, and Gattenhofia as sisters to Iris s.str. and genus Siphonostylis as sister to Iris s.l.

Conclusion

The present study clearly justifies the splitting of Iris s.l. into at least 23 genera, 18 of which have already been accepted in the past by numerous authorities. These genera are characterized by unique combinations of partly overlapping morphological characters and biogeography. Moreover, nearly the same entities, which we here recognize at a generic rank, were for centuries frequently referred to by horticulturists as “working-name” groups.  相似文献   

2.
The development of the genus concept for platform-bearing gondolellid conodonts is discussed. The collective genusNeogondolella Bender & Stoppel s. l. must be subdivided into several genera separated mostly by morphological differences of their platform elements. Only for these genera, but not forNeogondolella s. l., differential diagnoses againstGondolella Stauffer & Plummer s. l. can be given.Norigondolella n. gen., species of which were formerly placed intoParagondolella Mosher s. l.,Gondolella Stauffer & Plummer s. l. orNeogondolella Bender & Stoppel s. l., is a typical gondolellid platform conodont genus of topmost Triassic (Norian-Rhaetian) pelagic sediments. It has evolved from Carnian representatives ofParagondolella, but the lower surface of the platform element shows considerable similarities (homoeomorphy) to the Middle Carboniferous to Middle Permian genusMesogondolella Kozur.  相似文献   

3.
《Carbohydrate research》1986,149(2):263-277
Partially methylated and acetylated 3-deoxyoctitols were prepared from derivatives of 3-deoxy-d-manno-2-octulosonic acid (KDO), and identified as the d-glycero-d-talo and d-glycero-d-galacto isomers by g.l.c.-m.s. Mono- and oligosaccharide derivatives of KDO were subjected in sequence to methylation, carboxyl-reduction, hydrolysis, carbonyl-reduction, and acetylation to yield 1,2,6-tri-O-acetyl-3-deoxyoctitol derivatives. Carboxyl-reduction and then methylation gave the series of 2,6-di-O-acetyl derivatives. Oligosaccharides with KDO at the reducing end, e.g., β-d-ribofuranosyl-(1→7)-KDO, α-l-glycero-d-manno-heptopyranosyl-(1→5)-KDO, and α-KDOp-(2→4)-KDO, yielded, after carbonyl-reduction, methylation, carboxyl-reduction, hydrolysis, and acetylation, the 1,7-, 1,5-, and 1,4-di-O-acetyl derivatives, whereas remethylation after carboxyl-reduction gave the 7-, 5-, and 4-O-acetyl derivatives of 3-deoxyoctitol. General rules for the fragmentation of 3-deoxyoctitols during e.i.-m.s. were established.  相似文献   

4.
Molecular markers including inter simple sequence repeats (ISSR) and 18S rDNA gene sequence markers were combined with a detailed morphological analysis to seek characters that discriminate four taxa of Portulaca oleracea s.l. These taxa were identified as the microspecies Portulaca nitida, Portulaca oleracea, Portulaca rausii and Portulaca granulatostellulata. Morphological characters did not provide a clear distinction among the four taxa of P. oleracea s.l. It was found that mixed populations of the taxa occur in several locations and morphological similarities between the microspecies were detected. ISSR analysis indicates that gene flow among populations of different taxa was high and most of the genetic variation (61.9%) occurs within population. These results are inconsistent with the general characteristics of P. oleracea as a self- or 5% cross-pollinated species. A close relationship between P. oleracea, P. rausii and P. granulatostellulata was supported by ISSR and 18S rDNA gene sequence. The ISSR and 18s data support the specific status of P. nitida as a recently evolved taxon. We conclude that P. oleracea exists as a polymorphic species and is not divisible into microspecies based on seed surface as the primary morphological trait, and inter simple sequence repeats (ISSR) and 18S rDNA gene sequence markers. We suggest that the taxa do not merit specific rank as morphological characters and absence of a breeding barrier fail to separate the different populations when they become sympatric.  相似文献   

5.
Morphological variation ofPotentilla norvegica L.,P. heidenreichii Zimmeter andP. supina L. usually treated within the sectionRivales Wolf,P. recta L. (sect.Rectae Wolf),P. canescens Bess.,P. argentea L. s.l.,P. collina Wibel (sect.Argenteae Wolf) andP. goldbachii Rupr. (sect.Chrysanthae Wolf) was studied using multivariate statistical methods. According to k-means clustering,P. canescens stands closer toP. heidenreichii of the sect.Rivales than toP. argentea. P. collina, the other representative of sect.Argenteae, is not connected withP. canescens at all. Therefore,P. canescens should belong to sect.Rivales and not to sect.Argenteae. InPotentilla argentea s.l.,P. impolita Wahlenb.,P. argentea L. var.argentea, var.decumbens (Jord.)Lehm., var.demissa (Jord.) Lehm., var.grandiceps (Zimmeter) Rouy etE.G. Camus and var.tenerrima (Velen.) Wolf were identified.P. impolita specimens did not cluster out into a separate cluster as didP. collina, P. canescens andP. heidenreichii, but formed mixed clusters with different varieties ofP. argentea s.str. Therefore,P. impolita is not worthy of the rank of species and evidently not even that of subspecies, and should be treated as a variety—P. argentea var.incanescens (Opiz) Focke.  相似文献   

6.
The author submits the diagnosis of a new form of Rosa canina L. s.l., which grows in West Pomerania in the environs of Gryfino. It is a characteristic peculiarity of the taxon described that its pedicels are permanently and thickly pilose during the whole life of the plant.  相似文献   

7.
As the second largest and most diverse group in the superfamily Aphidoidea, the phylogeny of drepanosiphine aphids sensu lato (s.l.) is critical for discussing the evolution of aphids. However, the taxa composition and phylogenetic relationships of drepanosiphine aphids s.l. have not been fully elucidated to date. In this study, based on total-evidence analyses combining 4 molecular genes (3 mitochondrial, COI, tRNA-Leu/COII, and CytB; 1 nuclear, EF-1ɑ) and 64 morphological and biological characteristics, the phylogeny of this group was reconstructed for the first time at the subfamily level using different datasets, parsimonies and model-based methods. All of our phylogenetic inferences clearly indicated that the drepanosiphine aphids s.l. was not a monophyletic group and seemed to support the division of the drepanosiphine aphids s.l. into different groups classified at the subfamily level. Calaphidinae was also not a monophyletic group, and Saltusaphidinae was nested within this subfamily. Drepanosiphinae was not clustered with Chaitophorinae, which was inconsistent with the previous hypothesis of a close relationship between them, illustrating that their phylogeny remains controversial. Overall, some groups of drepanosiphine aphids s.l., including Phyllaphidinae, Macropodaphidinae, Pterastheniinae, Lizeriinae, Drepanosiphinae, Spicaphidinae, Saltusaphidinae, and Calaphidinae, clustered together and might constitute the actual drepanosiphine aphids s.l. To a certain extent, our results clarified the phylogenetic relationships among drepanosiphine aphids s.l. and confirmed their taxonomic status as subfamilies.  相似文献   

8.
Chloroplast DNA restriction-site variation was analyzed in 30 accessions representing 20 species from the major lineages in Thlaspi s.l. (previously described as genera by Meyer 1973, 1979) and allied genera from the subtribe Thlaspidinae (Peltaria, Teesdalia, Cochlearia, Ionopsidium, Aethionema). A total of 161 variable restriction sites were detected. Phylogenetic analyses indicated a division of Thlaspi s.l. into three groups consistent with Meyer's genera Thlaspi s. str., Microthlaspi and Noccaea/Raparia. The genus Thlaspi s.l. as currently described proved to be paraphyletic because one of its major lineages, i.e. Thlaspi s. str., appeared to be more closely related to other genera (Peltaria, Teesdalia) than to the remaining lineages of Thlaspi s.l., i.e. Noccaea/Raparia and Microthlaspi. Sequence divergence values (100 x p) between the Thlaspi s.l. lineages were similar to values between these groups and related genera (Teesdalia, Peltaria), respectively. Chloroplast DNA variation was also used to assess subtribal classification of the genera studied. The cpDNA data were inconsistent with the controversial taxonomic classifications based on morphology. The molecular data would suggest that (1) the subtribe Thlaspidinae, as traditionally described, is not monophyletic; (2) the Thlaspidinae should be reduced to a group consisting of Thlaspi s. str., Peltaria, Teesdalia, Microthlaspi, Noccaea/Raparia, and that Aethionema should be excluded from the Thlaspidinae; and (3) Cochlearia and Ionopsidium represent the subtribe Cochleariinae.  相似文献   

9.
The reconstructed Lake Karla, Greece, has been undergoing its water-filling period since November 2009. In this paper, we aimed at investigating whether the unicellular eukaryotes, including the toxic/parasitic ones, that have been found during mass fish kills in the lake (March–April 2010), persist during the first warm period of the lake (May, August, November 2010). Given that microscopic characterization of some of these eukaryotes is not adequate for their identification, we analysed the 18S rRNA gene diversity of plankton samples. All the found phylotypes belonged to the phyla of Mesomycetazoa, Chlorophyta, Fungi, Alveolata, Cercozoa, Cryptophyta and Stramenopiles. Some members of these groups seem to persist in Lake Karla as they have been found in early spring as well. These microscopic eukaryotes are either ichthyotoxic/parasitic (e.g. Pfiesteria sp./Pseudopfiesteria shumwayae, some Fungi, Mesomycetazoa, Lagenidium sp., Cercozoa) or indicative of hyper-eutrophic conditions (e.g. Oocystis sp., Scenedesmus spp.) and were rather abundant during the first spring–autumn period of the lake’s refilling process. These complex microscopic communities are expected to shape highly dynamic and variable food webs with the risk of repeated fish kills.  相似文献   

10.
The genus Podocarpus sensu latissimo (s.l.) was initially subdivided into eight sections. However, based on new information from different morphological and anatomical studies, these sections were recognised as new genera. This change in nomenclature sometimes is problematic when consulting ethnobotanical data especially when selecting plants for pharmacological screening, thus there is a need to clear any ambiguity with the nomenclature. Species of Podocarpus s.l. are important timber trees in their native areas. They have been used by many communities in traditional medicine and as a source of income. Podocarpus s.l. is used in the treatment of fevers, asthma, coughs, cholera, distemper, chest complaints and venereal diseases. Other uses include timber, food, wax, tannin and as ornamental trees. Although extensive research has been carried out on species of Podocarpus s.l over the last decade, relatively little is known about the African species compared to those of New Zealand, Australia, China and Japan. Phytochemical studies have led to the isolation and elucidation of various terpenoids and nor- and bis-norditerpenoid dilactones. Biflavonoids of the amentoflavone and hinokiflavone types have also been isolated. Nor- and bis-norditerpenes are said to be taxonomic markers for this genus. Recent in vitro and in vivo studies have shown antitumor, antimicrobial, anti-inflammatory, antioxidant, larvicidal, plant and insect growth regulation activities. Various studies have yielded important natural bioactive products and two of them are worth mentioning. Taxol, a significant anticancer agent has been isolated from Podocarpus gracilior and totarol, a diterpenoid isolated from various species and now commercially produced as a potent antibacterial and antioxidant agent. Findings from this review supports the use of an ethnobotanical and chemotaxonomical approach in selecting plants for pharmacological screening since most of the species in the different morphological groups have similar uses. Also the isolated compounds have chemotaxonomic value amongst the groups. Some of the biological activities identified from extracts and compounds isolated from Podocarpus s.l. support the rationale behind the medicinal uses of these species.  相似文献   

11.
A method based on peracetylated oxime (PAKO) derivatives has been developed for rapid g.l.c.-m.s. survey of ketoses. This derivatization procedure (and the chromatographic analysis of these derivatives) is identical to one previously employed to identify aldoses by means of peracetylated aldononitrile (PAAN) derivatives. The production of chemically different derivatives from the aldoses and ketoses by the same derivatization procedure greatly simplifies the chromatographic separation of the derivatives of the ketoses from those of the aldoses, and also results in distinctively different, mass-spectral fragmentation-pathways for the two sets of derivatives. Both the electron-impact (e.i.) and ammonia chemical-ionization (c.i.) mass spectra of PAKO derivatives have been examined. Extensive differences between the fragmentation-pathways of the PAAN and the PAKO derivatives have been observed both by e.i.m.s. and ammonia c.i.m.s. The g.l.c.-m.s. of these PAKO derivatives, in conjunction with various, isotopic variants of the derivatization process, can yield extensive structural information with regard to the starting saccharides associated with the known, or unknown, g.l.c. peaks. The g.l.c. and mass-spectral properties of highly O-methylated PAKO derivatives of d-fructose are compared, and contrasted, to those of the PAKO derivatives of non-O-methylated saccharides. The chromatographic properties of derivatives of oligosaccharides that result from the PAAN-PAKO derivatization procedure have also been studied.  相似文献   

12.
Chromosome counts and morphological measurements were carried out onEleocharis uniglumis s. 1. samples from nine populations in Slovakia, Hungary, Austria and Croatia. A high polyploidEleocharis uniglumis s.l. (2n=71–88) was found on halophilous sites: in western Slovakia (Svätojurský ?úr near Bratislava; 2n=71–78), on the Hungarian and Austrian shores of Lake Neusiedlersee (Hungary: Hidegség; Austria: Tadten, St. Andrä am Zicksee; 2n=71–82), and on the Croatian island of Krk, (shores of Lake Jezero and Lake Ponikve; 2n=80–88). These high polyploid populations have the same ploidy level asE. uniglumis subsp.sterneri, described as endemic to the islands of Öland and Gotland. Morphological similarities between the high polyploids and subsp.sterneri were found both in quantitative features correlated with ploidy level (stomatal length, anther length and fertile glume length) and in other characters (number of perianth bristles, broad sterile glume margins). Differences were detected in the receptacle density and in the length of perianth bristles compared to the length of the achene. Intermediate somatic chromosome numbers 2n=60–70, corresponding to Scandinavian hybrids betweenE. uniglumis subsp.uniglumis andE. uniglumis subsp.sterneri, were found near Neusiedlersee (Austria: Apetlon, Tadten; Hungary: Hidegség, Hegykö). These (karyologically intermediate) plants have intermediate stomatal lengths. In other features they are similar to the Central European high polyploids.Eleocharis uniglumis subsp.uniglumis (2n=46) was found here as well (Hungary: Fert?rákos).  相似文献   

13.
《Mycological Research》2006,110(8):979-984
Quantitative trait loci (QTL) for mycelial growth rate were identified and positioned on a genetic linkage map of Heterobasidion annosum sensu lato (s.l.), an important root rot pathogen on conifers. The mycelial growth rate among 84 progeny isolates were analysed in two different temperature regimes, 12 and 24 °C on malt extract agar and found to segregate as a continuous character. The assay identified three QTL for growth rate at low temperature positioned on the linkage groups 1, 17 and 19 with peak LOD values of 3.2, 2.9 and 4.8, respectively. At the QTL for high temperature growth, peak LOD values of 1.3, 2.8 and 2.2, were identified. The three QTL for the low temperature regime explained 20.9, 18.1 and 24.0 % of the variation in the mycelial growth rate, respectively. The broad-sense heritability was estimated to be 0.97 and 0.95 for growth rate at low and high temperatures, respectively. Two of the QTL for the mycelial growth rate were shown to be tightly linked to the intersterility genes S and P, which control mating within and between closely related species and intersterility groups of H. annosum s.lat. Isolates with a plus allele at the intersterility loci had a higher growth rate than isolates that harboured minus alleles.  相似文献   

14.
15.

Background and Aims

The legume clade Lotononis sensu lato (s.l.; tribe Crotalarieae) comprises three genera: Listia, Leobordea and Lotononis sensu stricto (s.s.). Listia species are symbiotically specific and form lupinoid nodules with rhizobial species of Methylobacterium and Microvirga. This work investigated whether these symbiotic traits were confined to Listia by determining the ability of rhizobial strains isolated from species of Lotononis s.l. to nodulate Listia, Leobordea and Lotononis s.s. hosts and by examining the morphology and structure of the resulting nodules.

Methods

Rhizobia were characterized by sequencing their 16S rRNA and nodA genes. Nodulation and N2 fixation on eight taxonomically diverse Lotononis s.l. species were determined in glasshouse trials. Nodules of all hosts, and the process of infection and nodule initiation in Listia angolensis and Listia bainesii, were examined by light microscopy.

Key Results

Rhizobia associated with Lotononis s.l. were phylogenetically diverse. Leobordea and Lotononis s.s. isolates were most closely related to Bradyrhizobium spp., Ensifer meliloti, Mesorhizobium tianshanense and Methylobacterium nodulans. Listia angolensis formed effective nodules only with species of Microvirga. Listia bainesii nodulated only with pigmented Methylobacterium. Five lineages of nodA were found. Listia angolensis and L. bainesii formed lupinoid nodules, whereas nodules of Leobordea and Lotononis s.s. species were indeterminate. All effective nodules contained uniformly infected central tissue. Listia angolensis and L. bainesii nodule initials occurred on the border of the hypocotyl and along the tap root, and nodule primordia developed in the outer cortical layer. Neither root hair curling nor infection threads were seen.

Conclusions

Two specificity groups occur within Lotononis s.l.: Listia species are symbiotically specific, while species of Leobordea and Lotononis s.s. are generally promiscuous and interact with rhizobia of diverse chromosomal and symbiotic lineages. The seasonally waterlogged habitat of Listia species may favour the development of symbiotic specificity.  相似文献   

16.
The nonmarine ostracod genus Cypridea s.l., characterized by an antero-ventral “beak” (rostrum and alveolus) in both valves, achieved high diversity and global distribution in the Early Cretaceous but declined in the Late Cretaceous and became extinct during the Paleogene. Although it clearly belongs to the Superfamily Cypridoidea (Order Podocopida, Suborder Cypridocopina), the precise affinities of Cypridea s.l. have been controversial, different authors variously suggesting it to be most closely related to the cypridoidean families Ilyocyprididae, Cyprididae or Notodromadidae. Since Cypridea s.l. was responsible for much of the explosive radiation of nonmarine cypridoidean taxa during the Mesozoic, a clear understanding of its affinities is crucial to the elucidation of nonmarine ostracod phylogeny. We evaluate some of the key morphological features of cypridoidean carapaces as indicators of phylogenetic affinity, paying special attention to adductor muscle scar patterns and the structure of the anterior marginal zone. The morphology of Cypridea s.l. is compared with certain cypridoideans that bear similar beak-like or lip-like antero-ventral marginal structures, notably genera of the Family Cyprididae such as Bennelongia, Chlamydotheca, Cypris and Talicypridea, and consider whether these similarities represent close phylogenetic relationships or homeomorphy.  相似文献   

17.
The phylogenetic relationships of the tropical African genus Virectaria with its associated genera within the tribe Sabiceeae s.l. (Ixoroideae and Rubiaceae) were inferred from the combined analysis of nuclear ITS and chloroplast rpoC1 and trnT-F nucleotide sequence data. Phylogenetic relationships within Virectaria were investigated using combined analyses of ETS (nrDNA), ITS, rpoC1 and trnT-F sequence data. The present analyses further show that Hekistocarpa is sister to the Tamridaea–Virectaria–Sabicea clade, Tamridaea and Virectaria are sister genera, and Sabicea s.l. is sister to the Tamridaea–Virectaria clade. Our results strongly support the monophyly of Virectaria and the sister-group relationships between V. multiflora and V. herbacoursi, V. angustifolia and V. procumbens, and V. major and V. belingana. Our analyses indicate a tropical African origin for Sabiceeae s.l., a long isolated evolution for Tamridaea and a wide range of dispersal of Virectaria species in the Lower-Guinean, Upper-Guinean and Congolian regions, without a clearly defined direction of migration.  相似文献   

18.
19.

Introduction

High malaria transmission heterogeneity in an urban environment is basically due to the complex distribution of Anopheles larval habitats, sources of vectors. Understanding 1) the meteorological and ecological factors associated with differential larvae spatio-temporal distribution and 2) the vectors dynamic, both may lead to improving malaria control measures with remote sensing and high resolution data as key components. In this study a robust operational methodology for entomological malaria predictive risk maps in urban settings is developed.

Methods

The Tele-epidemiology approach, i.e., 1) intensive ground measurements (Anopheles larval habitats and Human Biting Rate, or HBR), 2) selection of the most appropriate satellite data (for mapping and extracting environmental and meteorological information), and 3) use of statistical models taking into account the spatio-temporal data variability has been applied in Dakar, Senegal.

Results

First step was to detect all water bodies in Dakar. Secondly, environmental and meteorological conditions in the vicinity of water bodies favoring the presence of Anopheles gambiae s.l. larvae were added. Then relationship between the predicted larval production and the field measured HBR was identified, in order to generate An. gambiae s.l. HBR high resolution maps (daily, 10-m pixel in space).

Discussion and Conclusion

A robust operational methodology for dynamic entomological malaria predictive risk maps in an urban setting includes spatio-temporal variability of An. gambiae s.l. larval habitats and An. gambiae s.l. HBR. The resulting risk maps are first examples of high resolution products which can be included in an operational warning and targeting system for the implementation of vector control measures.  相似文献   

20.
We describe and illustrate two new species of Boletellus section Boletellus, B. aurocontextus sp. nov. and B. areolatus sp. nov., which are generally assumed to be B. emodensis. In this study, we reconstructed separate molecular phylogenetic trees of section Boletellus using the nucleotide sequences of the internal transcribed spacer (ITS) region of nuclear ribosomal DNA, the largest subunit (RPB1) and the second-largest subunit (RPB2) of nuclear RNA polymerase II gene and mitochondrial cytochrome oxidase subunit 3 (cox3) gene. We also examined the morphologies of B. emodensis sensu lato (s.l.) and other related species for comparison. The molecular phylogenetic tree inferred from the sequences of nuclear DNA (ITS, and combined dataset of RPB1 and RPB2) indicated that three genetically and phylogenetically well-separated lineages were present within B. emodensis s.l. These three lineages were also distinguished on the basis of the molecular phylogenetic tree constructed using the sequences of mitochondrial DNA (cox3), suggesting distinct cytonuclear disequilibria (i.e., evidence of reproductive isolation) among these lineages. Therefore, these three lineages can be treated as independent species: B. aurocontextus, B. areolatus, and B. emodensis. Boletellus aurocontextus and B. areolatus are also distinct from B. emodensis by the macro- and microscopic morphologies. Boletellus aurocontextus is characterized by a pileus with bright yellow to lemon yellow context, which can be observed through a gap in the scales, and basidiospores with relatively large length (mean spore length, 21.4 μm; quotient of spore length and width, 2.51). In contrast, B. areolatus is characterized by a pileus with floccose to appressed thin scaly patches, a stipe with pallid or pale cream color at the upper half, and basidiospores with relatively small length (mean spore length, 16.5 μm; quotient of spore length and width, 1.80).  相似文献   

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