Variability of the healthy human proteome

The aim of this review is to analyze results of studies on characteristics of protein variability and diversity of posttranslational modifications of proteins in healthy humans. Numerous studies have demonstrated that a proteomic profile is characterized by significant intra- and inter-individual variability, and quite often natural (“normal”) variability of some proteins can be comparable to changes observed in pathological processes. Results obtained by our research group have demonstrated high intra-individual variability of serum low-molecular subproteome of healthy volunteers, certified by a special medial committee (the coefficient of variation (CV) of 42.6%). The proteins characterized by high variability under normal conditions (e.g. haptoglobin — 0–40 mg/ml; lysozyme — 0.01–0.1 mg/ml; C-reactive protein — 0.01–0.3 mg/ml) cannot be considered as potential biomarkers of diseases. On the contrary, proteins and peptides characterized by insignificant dispersion in healthy population (such as albumin ( CV = 9%); transferrin-(CV = 14%); C3c complement (CV = 17%), α-1 acid glycoprotein (CV = 21%), α-2-macroglobulin (CV = 20%); transthyretin fragment (CV = 28.3%) and α2-HS-glycoprotein βchain (CV = 29.7%)) can provide valuable information about the state of health. Thus, studies of plasticity in the proteomic profiles of healthy humans will help to correct reference intervals used in clinical proteomics.     

Inheritance of reproductive traits of medicinal leeches (Hirudo medicinalis L.)

The phenotype variability and inheritance of reproductive traits were investigated in the medicinal leech. Distribution parameters were determined for the following traits: batch size (X = 4.3 +/- 0.2, sigma = 1.7, CV = 40%, As = 0.23 +/- 0.25, Ex = 0.19 +/- 0.51), number of juveniles in a cocoon (X = 10.9 +/- 0.3, sigma = 4.6, CV = 42%, As = 0.31 +/- 0.15, Ex = 0.23 +/- 0.30), and juvenile weight (X = 32.0 +/- 0.3, sigma = 14.9, CV = 47%, As = 1.38 +/- 0.05, Ex = 3.32 +/- 0.11. A nonlinear negative correlation between the number of juveniles in a cocoon and their weight was found (correlation ratio R = 0.86). It was shown that the environmental variance dominated over the genotypic one in the structure of phenotypic variance of the traits studied. The genetic variability is determined mainly by additive gene interactions and, to a small extent, intralocus dominance. The narrow-sense heritability, h2, for batch size was 0.35-0.40; for the number of juveniles in a cocoon, 0.35; for juvenile weight, 0.42.     

Incorporation of galactomannans in the diet of newly weaned piglets: effect on bacteriological and some morphological characteristics of the small intestine

In search of substances replacing antibiotics as growth promoters for farm animals, non-digestible oligosaccharides (NDO) or non-starch polysaccharides (NSP) have been proposed as possible alternatives. In this context, the influence of galactomannans on bacteriological and morphological aspects of the gastrointestinal tract in weanling pigs was investigated. Four groups of five newly weaned piglets received one of the following diets: control feed (C), C supplemented with guar gum (1%), C supplemented with locust bean gum (1%) and C supplemented with 10% of carob tree seeds meal as source of locust bean gum. The animals were euthanized after 11-12 days and digesta were sampled in stomach, jejunum (proximal and distal) and caecum, while mucosal scrapings and ring shaped tissue samples were taken of proximal and distal jejunum. On these samples bacteriological, biochemical and morphological determinations were carried out. Total count of bacteria in digesta and mucosal scrapings was not influenced by the different diets, with the exception of the proximal jejunum where a small decrease (0.5 log10 CFU) was noted with the guar gum and carob tree seeds diet. The number of E. coli increased by feeding both gums and carob tree seeds. With the latter diet, higher counts of streptococci were observed. In agreement with the lower concentration of lactic acid in jejunal contents, guar gum decreased the number of lactobacilli. Locust bean gum decreased the molar proportion of acetate in caecal contents while butyrate and valerate were augmented. Feeding the carob tree seeds resulted in shorter villi and a lower villus height/crypt depth ratio in the jejunum mucosa, which was an indication for a faster renewal rate of the epithelium. Both locust bean gum feeds significantly lowered the mitotic index in the crypts of the small intestine. Only with the carob tree seeds diet, viscosity of jejunal contents was increased. In conclusion, the effects of the addition of 1% of pure guar gum or locust bean gum were inconsistent and not very outspoken, whereas 10% of carob tree seeds meal in the diet resulted in influences on intestinal characteristics at the bacteriological and morphological level.     

Incorporation of galactomannans in the diet of newly weaned piglets: Effect on bacteriological and some morphological characteristics of the small intestine

In search of substances replacing antibiotics as growth promoters for farm animals, non-digestible oligosaccharides (NDO) or non-starch polysaccharides (NSP) have been proposed as possible alternatives. In this context, the influence of galactomannans on bacteriological and morphological aspects of the gastrointestinal tract in weanling pigs was investigated. Four groups of five newly weaned piglets received one of the following diets: control feed (C), C supplemented with guar gum (1%), C supplemented with locust bean gum (1%) and C supplemented with 10% of carob tree seeds meal as source of locust bean gum. The animals were euthanized after 11?–?12 days and digesta were sampled in stomach, jejunum (proximal and distal) and caecum, while mucosal scrapings and ring shaped tissue samples were taken of proximal and distal jejunum. On these samples bacteriological, biochemical and morphological determinations were carried out. Total count of bacteria in digesta and mucosal scrapings was not influenced by the different diets, with the exception of the proximal jejunum where a small decrease (0.5 log₁₀ CFU) was noted with the guar gum and carob tree seeds diet. The number of E. coli increased by feeding both gums and carob tree seeds. With the latter diet, higher counts of streptococci were observed. In agreement with the lower concentration of lactic acid in jejunal contents, guar gum decreased the number of lactobacilli. Locust bean gum decreased the molar proportion of acetate in caecal contents while butyrate and valerate were augmented. Feeding the carob tree seeds resulted in shorter villi and a lower villus height/crypt depth ratio in the jejunum mucosa, which was an indication for a faster renewal rate of the epithelium. Both locust bean gum feeds significantly lowered the mitotic index in the crypts of the small intestine. Only with the carob tree seeds diet, viscosity of jejunal contents was increased. In conclusion, the effects of the addition of 1% of pure guar gum or locust bean gum were inconsistent and not very outspoken, whereas 10% of carob tree seeds meal in the diet resulted in influences on intestinal characteristics at the bacteriological and morphological level.     

Endozoochory of a dry‐fruited tree aids quarry passive restoration and seed soaking further increases seedling emergence

As practitioners promote passive restoration as a complementary approach to technical reclamation, it is imperative to know its drivers. Although the consequences of endozoochory can be crucial to passive restoration success, few experimental studies assess the use of heavily disturbed sites by seed dispersers such as carnivores and how the seeds they bring in emerge and survive. Using an indoor sowing experiment conducted in a quarry located within a natural park in Portugal, we examined for the first time how carnivore endozoochorous seeds collected in the quarry potentially influence its passive restoration, through effects on plant emergence and survival. Also, we tested whether sowing date and water soaking, relevant factors when sowings are to be carried out, would affect seedling emergence and mortality rates when compared with the effect of endozoochory. Our target species were included in the revegetation plan of the quarry, of which endozoochorous seeds of Carob tree (Ceratonia siliqua) were collected in sufficient number for analysis. Irrespective of the carnivore species, endozoochorous carob seeds performed similarly to untreated seeds regarding emergence rates. Endozoochorous carob seedlings showed greater mortality rates but the net result for the plant can still be the colonization of recently vacant habitats by a large proportion of viable seeds. Concerning sowing date, the later carob seeds were sown over the fruit‐ripening season the faster seedlings emerged. Water soaking increased emergence rate by 6.5 times. Broadly, sowings with previous soaking and carnivore‐mediated seed dispersal of this dry‐fruited tree can jointly enhance quarry restoration.     

浙江楠种群表型变异

以探讨浙江楠(Phoebe chekiangensis)种群间和种群内的表型变异程度和变异规律为目的, 对其分布区9个种群的10个表型性状进行了研究。采用巢式方差分析、变异系数、多重比较和相关分析等多种分析方法, 对种群间和种群内的表型多样性及其与地理生态因子的相关性进行了讨论。研究结果表明: 浙江楠叶片、种子等表型性状在种群间和种群内均存在着丰富的变异, 10个性状在种群间、种群内的差异均达极显著水平; 种群内的变异(21.74%)大于种群间的变异(18.45%), 表型性状的平均分化系数为41.43%, 种群内变异是浙江楠表型变异的主要变异来源。各性状平均变异系数为12.78%, 变化幅度为6.50%-19.38%。种群间叶片的平均变异系数(16.99%)高于种群间种子的平均变异系数(8.58%), 表明种子的稳定性高于叶片。叶宽、叶面积与叶片其他性状间多呈显著或极显著相关, 种子千粒重与种子宽、种子体积显著正相关; 而种子和叶片的各性状间多无显著相关性。种子宽、种子体积和种子千粒重随着海拔的增加出现减小的趋势, 种子体积受纬度控制, 随着纬度的增大表现出增大的趋势。     

Investigation of uniformity in pig carcass and meat quality traits

The study was carried out to provide information on uniformity of commercial pigs on some of the most important traits determining pork quality: carcass, loin, ham and shoulder weights, fatness, drip loss, pH and colour. Three batches of pigs raised at the same farm and slaughtered at four different dates in the same commercial abattoir were considered. Batches included halothane-free females and castrated males, Duroc and Pietrain sire lines and two slaughter weights, but a common maternal line. The first batch was obtained using commercial Duroc sire boars, and included a total of 112 animals (56 castrated males and 56 females). The second batch used Duroc and Pietrain sire boars with the target to achieve two different final weights (105 and 115 kg live weight); 128 animals were controlled (64 castrated males and 64 females), 16 for each combination of sire boar, sex and final weight. The last batch used only Pietrain sire boars with 96 controlled pigs (48 castrated males and 48 females). The uniformity was measured by the coefficient of variation (CV) and the coefficient of dispersion (CD) for all data available, and for groups of common sex, sire breed and slaughter weight. Differences in uniformity were tested among traits and groups by using confidence intervals (CIs) at 95% confidence level (CI95%) for the CV and CD. Results showed a significantly lower uniformity for drip loss (CV = 40.4%, CI95% 36.9% to 44.7%; CD = 32.1%, CI95% 28.7% to 35.4%) and backfat (CV = 22.8%, CI95% 21.1% to 24.8%; CD = 18.3%, CI95% 17.1% to 20.2%) the pH being the most uniform trait (CV = 3.2%, CI95% 3.0% to 3.5%; CD = 2.6%, CI95% 2.4% to 2.9%). When comparing different 'sire breed-sex-slaughter weight' groups, no consistent sex and slaughter weight differences in uniformity were found, but animals from Pietrain sire breed showed a tendency to be less uniform for carcass traits than animals from Duroc sire breed. Nevertheless, variability within those groups was very high and often similar to that observed when considering all the animals from all the groups. Small differences were found comparing uniformity when using the CV or the CD. CIs of these coefficients have proved to be a simple and useful tool for testing differences in uniformity.     

Inhibitors from carob (Ceratonia siliqua L.)

Summary Inhibitory extracts of carob and abscisic acid (ABA) were compared and found to behave differently in three types of tests. The carob inhibitors remained at the origin upon thin-layer chromatography in two different solvent systems while a cis-trans mixture of ABA had Rf's of 2.5 and 3.5 in the first system (chloroform:acetic acid, 95:5), and 3.5 and 4.5 in the second system (benzene:acetic acid:water, 8:3:5). When ABA and carob extract were mixed and then chromatographed, the ABA had the same Rf values as ABA chromatographed alone.Assays utilizing light-grown, dwarf peas showed that a weight ratio of 1000: 1 ABA:gibberellic acid (GA₃) was necessary to inhibit GA₃-induced growth by 50% while carob fraction C is inhibitory to GA₃ at a ratio of 17:1. The amount of ABA which inhibited 50% of the growth induced by 0.05 g GA₃ reduced the endogenous growth of both dwarf and non-dwarf pea seedlings; in contrast, concentrations of carob extract up to 100 times greater than the amount necessary for 50% inhibition of the growth response caused by 0.05 g GA₃ did not affect endogenous growth.Only very small amounts of inhibitory activity from carob extract were transferred from water to chloroform at a pH (2.0) at which most of the ABA was transferred.     

α-Galactosidase from sweet chestnut seeds

The major sugars of fresh seeds of Castanea sativa were shown to be raffinose, stachyose and sucrose. Drying seeds at 25° for 14 weeks increased the ratio raffinose: stachyose from 1.1 to 3.5, reduced sucrose content by ca 50 % and decreased total extractable α-galactosidase. The enzyme activity was resolved into two peaks, a high MW form I (apparent MW215 000) and a low MW form II (apparent MW 53 000). The latter form was predominant in the extract of fresh seeds whereas the former was the main form in the 14-week dried seeds. An increase in the amount of enzyme I was also observed when a buffered extract (pH 5.5) of fresh seeds was stored at 4°. Enzymes I and II had pH optima of 4.5 and 6, respectively. Both enzymes hydrolysed p-nitrophenyl α-d-galactoside at a much greater rate than the natural substrates raffinose, stachyose, locust bean gum and carob gum. However, enzyme I showed preference for stachyose as compared to raffinose; the opposite order was observed for enzyme II.     

Natural enemies of the carob mothEctomyelois ceratoniae (Zeller)

The presence of natural enemies of the carob moth was investigated on carob trees, acacias and citrus trees in the various regions of Israel. The highest number of parasite species was found on carob trees, while only a few were observed on acacias and a single one on citrus. A list is given of the natural enemies of the carob moth.     

祁连山青海云杉天然群体的种实性状表型多样性

 以系统揭示其表型变异程度和变异规律为目的,对祁连山青海云杉(Picea crassifolia )天然分布区的10个群体的8个种实性状进行了比较分析。采用方差分析、多重比较,相关分析、聚类分析等多种分析方法,对群体间和群体内的表型多样性进行了讨论。方差分析结果表明,各种实性状在群体间都存在极显著差异,除球果干质量和球果长/球果径外,其余性状在群体内都存在着极显著的差异;表型分化系数即群体间变异为27.18%,小于群体内的变异(72.82%);球果长、球果径、球果干质量、球果形状指数、种子长、种子宽、千粒重和种子形状指数的变异系数分别为：10.08%、5.80%、19.29%、9.66%、8.38%、15.34%、6.52%和13.94%;8个种实性状间多数呈极显著或显著的正相关,球果干质量、种子长、千粒重、球果长和球果径为青海云杉易测定和重要的种实性状;种实性状呈现出以经度变异为主的梯度规律性;通过表型性状的聚类分析可以将青海云杉10个群体划分为4类。     

Continuous fermentation to produce fungal protein. Effect of growth rate on the biomass yield and chemical composition of Fusarium moniliforme

Fusarium moniliforme was grown on a carob aqueous extract in a chemostat for fungal protein production. The substrate was adjusted to provide 0.5% carob sugars supplemented with inorganic salts. The dilution rate varied from 0.086 to 0.227 hr^?1 under constant conditions of temperature (30°C), pH (4.5), and oxygen saturation (60–80%). A yield of 0.709 g dry mycelium/g consumed carob sugar and a productivity value of 0.687 g dry mycelium/liter hr^?1 were obtained at μ = 0.205 hr^?1. The maintenance coefficient was 0.077 g carob sugar/g dry mycelium hr^?1. While the carbohydrate and purine content of dry mycelium increased at μ values from 0.114 to 0.205 hr^?1 both true (Lowry) and crude (N × 6.25) protein contents decreased at the same μ range. Maximum values of 36.3% true and 47.9% crude protein of dry mycelium were obtained at μ = 0.114 hr^?1, whereas a minimum purine content of 99.8 μmol/g corresponding to 6.42% nucleic acids was recorded at μ = 0.086 hr^?1. It was concluded that a continuous fermentation of carob aqueous extract using F. moniliforme should be operated at growth rates of approximately 0.205 hr^?1 in order to maximize protein production.     

Beat-to-beat repolarization variability in ventricular myocytes and its suppression by electrical coupling

Single ventricular myocytes paced at a constant rate and held at a constant temperature exhibit beat-to-beat variations in action potential duration (APD). In this study we sought to quantify this variability, assess its mechanism, and determine its responsiveness to electrotonic interactions with another myocyte. Interbeat APD(90) (90% repolarization) of single cells was normally distributed. We thus quantified APD(90) variability as the coefficient of variability, CV = (SD/mean APD(90)) x 100. The mean +/- SD of the CV in normal solution was 2.3 +/- 0.9 (132 cells). Extracellular TTX (13 microM) and intracellular EGTA (14 mM) both significantly reduced the CV by 44 and 26%, respectively. When applied in combination the CV fell by 54%. In contrast, inhibition of the rapid delayed rectifier current with L-691,121 (100 nM) increased the CV by 300%. The CV was also significantly reduced by 35% when two normal myocytes were electrically connected with a junctional resistance (R(j)) of 100 MOmega. Electrical coupling (R(j) = 100 MOmega) of a normal myocyte to one producing early afterdepolarization (EAD) completely blocked EAD formation. These results indicate that beat-to-beat APD variability is likely mediated by stochastic behavior of ion channels and that electrotonic interactions act to limit temporal dispersion of refractoriness, a major contributor to arrhythmogenesis.     

Effect of starting stance on initial sprint performance

The effect of different starting stances from a standing position on short sprint times and the subsequent variability in times was investigated in this study. A dual-beam timing light system was used to measure 5- and 10-m times for 3 different standing starts commonly found in the sporting environment: parallel (feet parallel to the start line), split (lead left foot on start line, right leg back), and false (initial parallel start, right leg drops back to split start when movement initiated). The parallel start was found to be significantly (alpha < 0.05) slower than the other 2 stances for both the 5- ( approximately 8.3%) and the 10-m (approximately 5.9%) distances. Within the trial, variation of the different starting stances was equally consistent; however, there was less variability for the 10-m distance (CV = 1.16-1.67%) than the 5-m distance (CV = 1.43-2.15%) for each start for both men and women. The split and false start seem to offer the best option as a movement strategy for minimizing short-distance sprint times. However, the benefits of these 2 starts are less clear if total movement time is the variable of interest.     

Resource distribution and the trade-off between seed number and seed weight: a comparison across crop species

In grain crops, total sink capacity is usually analysed in terms of two components, seed number and individual seed weight. Seed number and potential individual seed weight are established at a similar timing, around the flowering period, and seed weight at maturity is highly correlated with the potential established earlier. It is known that, within a species, available resources during the seed set period are distributed between both yield components, resulting in a trade-off between seed number and seed weight. Here we tested if this concept could apply for interspecific comparisons, where combinations of numbers and size across species could be related to the total available resources being either allocated to more seed or larger potential individual seed weight during the seed set period. Based on this, species differences in seed weight should be related to resource availability per seed around the period when seed number is determined. Resource availability per seed was estimated as the rate of increase in aboveground biomass per seed around the period of seed set. Data from 15 crop species differing in plant growth, seed number, seed weight and seed composition were analysed from available literature. Because species differed in seed composition, seed weight was analysed following an energy requirement approach. There was an interspecific trade-off relationship between seed number per unit of land area and seed weight (r = 0.92; F(1, 13) = 32.9; n = 15; P < 0.001). Seed weight of different species was positively correlated (r = 0.90; F(1, 13) = 52.9; n = 15; P < 0.001) with resource availability per seed around the seed set period. This correlation included contrasting species like quinoa (Chenopodium quinoa; ∼100000 seeds m⁻², ∼4 mg equivalent-glucose seed⁻¹) or peanut (Arachis hypogaea; ∼800 seeds m⁻², ∼1000 mg equivalent-glucose seed⁻¹). Seed number and individual seed weight combinations across species were related and could be explained considering resource availability when plants are adjusting their seed number to the growth environment and seeds are establishing their storage capacity. Available resources around the seed set period are proportionally allocated to produce either many small seeds or few larger seeds depending on the particular species.     

Estimating the uncertainty in annual net ecosystem carbon exchange: spatial variation in turbulent fluxes and sampling errors in eddy-covariance measurements

Above forest canopies, eddy covariance (EC) measurements of mass (CO₂, H₂O vapor) and energy exchange, assumed to represent ecosystem fluxes, are commonly made at one point in the roughness sublayer (RSL). A spatial variability experiment, in which EC measurements were made from six towers within the RSL in a uniform pine plantation, quantified large and dynamic spatial variation in fluxes. The spatial coefficient of variation (CV) of the scalar fluxes decreased with increasing integration time, stabilizing at a minimum that was independent of further lengthening the averaging period (hereafter a ‘stable minimum’). For all three fluxes, the stable minimum (CV=9–11%) was reached at averaging times (τ_p) of 6–7 h during daytime, but higher stable minima (CV=46–158%) were reached at longer τ_p (>12 h) during nighttime. To the extent that decreasing CV of EC fluxes reflects reduction in micrometeorological sampling errors, half of the observed variability at τ_p=30 min is attributed to sampling errors. The remaining half (indicated by the stable minimum CV) is attributed to underlying variability in ecosystem structural properties, as determined by leaf area index, and perhaps associated ecosystem activity attributes. We further assessed the spatial variability estimates in the context of uncertainty in annual net ecosystem exchange (NEE). First, we adjusted annual NEE values obtained at our long‐term observation tower to account for the difference between this tower and the mean of all towers from this experiment; this increased NEE by up to 55 g C m^?2 yr^?1. Second, we combined uncertainty from gap filling and instrument error with uncertainty because of spatial variability, producing an estimate of variability in annual NEE ranging from 79 to 127 g C m^?2 yr^?1. This analysis demonstrated that even in such a uniform pine plantation, in some years spatial variability can contribute ～50% of the uncertainty in annual NEE estimates.     

Lung weight in vivo measured with computed tomography and rebreathing of soluble gases

In nine anesthetized dogs, accuracy of noninvasive measurements of lung weight (W) and gas volume in vivo was determined from volume and density determined by computed tomography (CT) and by rebreathing helium and the soluble gases dimethyl ether (WDME) and acetylene (WC2H2). Reference standards were obtained from the postmortem scale weight of the frozen lungs (Wscale) and compared with the CT lung weights measured in the living dog (WCT-38) and the frozen carcass (WCT-cold). WCT-cold did not significantly differ from Wscale [-2 +/- 9% (SD), P = 0.7]. WCT-cold was 10% greater than WCT-38 (0.10 greater than P greater than 0.05), suggesting an increase in lung weight despite immediately commencing freezing after death. WDME measured 64 +/- 6% and WC2H2 56 +/- 12% of WCT-38. Serial multiple measurements in three dogs over 14 wk showed a coefficient of variation (CV) of 10 +/- 2% for WDME, 18 +/- 2% for WC2H2, 4.1 +/- 0.9% for WCT, 2.6 +/- 0.8% for CT density, and 3.5 +/- 1.6% for functional residual capacity (FRC) by CT. FRC calculated from CT consistently underestimated FRC measured by rebreathing helium by 18 +/- 8% (P less than 0.005). This error, despite good agreement between WCT and Wscale, was explained by underestimation of CT total lung volume and overestimation of lung density by factors known to affect CT readings, such as partial volume effects, beam hardening, and limited number of input signals. These data show that CT scanning can provide serial measurement of the mass, density, and volume of the lungs with a CV in the order of 5%, but the rebreathing of soluble gases gives more than double this variability. Measurements of WDME performed on the same day had a CV of 3 +/- 1%, so that WDME provides a precise noninvasive means to measure lung weight in acute studies.     

Gulf Coast Riceland Seed Biomass Estimates for Waterfowl Habitat Conservation

Biomass estimates of potential waterfowl foods are fundamental to estimating foraging carrying capacity of waterfowl habitat by conservation planners and managers of the North American Waterfowl Management Plan-Gulf Coast Joint Venture (GCJV). Rice and moist-soil seeds in Gulf Coast rice fields provide principal sources of energy for waterfowl during migration and winter. We investigated spatio-temporal biomass dynamics of these seeds and modeled their variation in production and idled rice fields in southwestern Louisiana, southeastern Texas, and the Texas Mid-Coast, USA, in August and November 2010–2013. We hypothesized that previous estimates of November rice and moist-soil seed biomass from the Mississippi Alluvial Valley were not applicable to the GCJV region because climate and agricultural production practices (e.g., ratooning, crayfish [Procambrus spp.] aquaculture) are primary inter-regional contrasts. Waste-rice biomass was greatest in November in fields with an unharvested second crop of rice from tillers of original plants (i.e., ratoon crop; 837.7 kg[dry]/ha; CV = 16.7%) and least in fields without a ratoon crop (119.3 kg/ha; CV = 18.5%). Moist-soil seed biomass was greatest in idled rice fields in October (477.3 kg/ha; CV = 24.8%), where substrate and rice stubble were disked at the time of sampling, and in idled fields with standing native vegetation in November (304.8 kg/ha; CV = 17.1%). Field-level variation in waste rice in production fields in November was best explained by an interaction between field management (e.g., harvested ratoon) and rice variety. We were unable identify a reliable predictor of field-level variation in moist-soil seed biomass in idled fields for July–August or November (i.e., null model was best or competitive). Substituting existing seasonal moist-soil and rice seed biomass estimates in GCJV planning models with those from our study would result in a seasonally flooded habitat objective 76% (101,974 ha) greater than the current GCJV estimate for 3 rice-growing planning areas. We encourage conservation planners in the GCJV region to use biomass estimates from our study because they are reasonably precise for planning and implementation (i.e., CV ~ 20%) and represent most contemporary patterns of farming practices and food abundance in this region. Further, programs and incentives that promote production of ratoon rice crops and allow growth of naturally occurring vegetation in idled rice fields, followed by shallow flooding during November–February, would significantly enhance food resources for waterfowl and other waterbirds in this important landscape for North American avifauna. © 2020 The Wildlife Society.     

α-d-Galactosidase activity and galactomannan and galactosylsucrose oligosaccharide depletion in germinating legume seeds

Germinating seeds of lucerne, guar, carob and soybean initially depleted raffinose series oligosaccharides and then galactomannan. This depletion was accompanied by a rapid increase and then a decrease in α-galactosidase levels. Lucerne and guar contained two α-galactosidase activities, carob three and soybean four. One of these in each plant, from its location in the endosperm, time of appearance and kinetic behaviour, appeared to be primarily involved in galactomannan hydrolysis. This enzyme in lucerne had MW of 23 000 and could not be separated from β-mannanase by (NH₄)₂SO₄ fractionation, DEAE, CM or SE-cellulose chromatography or gel filtration, but only by polyacrylamide gel electrophoresis. In guar, carob and soybean, it could be separated by ion-exchange chromatography and gel filtration. In lucerne, carob and guar most of the total increase in activity was due to this enzyme. The other α-galactosidases had MWs of about 35 000 and could be separated from β-mannanase by dissection, ion exchange cellulose chromatography and gel filtration. They were located in the cotyledon-embryo and appeared to be primarily involved in galactosylsucrose oligosaccharide hydrolysis.     

Genetic diversity and mating system in a tropical tree,Carapa guianensis (Meliaceae)

Carapa guianensis Aublet. (Meliaceae) is an abundant, canopy tree species often exported as fine wood products. The populations in the Atlantic coastal plain of Costa Rica have undergone a wide variety of human-induced changes in distribution and abundance, including isolation due to deforestation. Using protein electrophoretic analysis of seeds, we investigated the genetic variability and population differentiation of nine populations and the outcrossing rate in two populations that differed in density by a factor of 50%. Average polymorphism (35%) and heterozygosity (0.12) across populations were relatively low in comparison with other tropical tree species. Only 4.6% of the total genetic variability could be attributed to population differentiation even though populations were separated by as much as 70 km. However, genetic differentiation did increase with distance between pairs of compared populations. There were no apparent differences in genetic variation between logged and unlogged forests. The outcrossing rate for each population was not significantly different from 1.0, but there was evidence of nonrandom mating in the lower density population. High levels of gene flow are probably maintained by seed dispersal as seeds travel well throughout flooded forests and rivers. High population density and synchronous flowering also contribute to high outcrossing rates. These genetic characteristics suggest that Carapa guianensis is a good candidate for natural forest management where it occurs at high density. However, current management practices need to account for the rapid rate of deforestation occurring around managed natural forest sites that will result in the elimination of intervening populations.