β-(1,3)-Glucan Exposure Assessment by Passive Airborne Dust Sampling and New Sensitive Immunoassays

Associations between house dust-associated β-(1,3)-glucan exposure and airway inflammatory reactions have been reported, while such exposures in early childhood have been suggested to protect against asthma and wheezing. Most epidemiological studies have used reservoir dust samples and an inhibition enzyme immunoassay (EIA) for β-(1,3)-glucan exposure assessment. The objective of this study was to develop inexpensive but highly sensitive enzyme immunoassays to measure airborne β-(1,3)-glucans in low-exposure environments, like homes. Specificities of available anti-β-(1,3)-glucan antibodies were defined by direct and inhibition experiments. Three suitable antibody combinations were selected for sandwich EIAs. β-(1,3)-Glucans in passive airborne dust collected with an electrostatic dust fall collector (EDC) and floor dust from seven homes were measured with the three EIAs. Floor dust samples were additionally analyzed in the inhibition EIA. The sandwich EIAs were sensitive enough for airborne glucan measurement and showed different specificities for commercial glucans, while the β-(1,3)-glucan levels in house dust samples correlated strongly. The feasibility of measuring glucans in airborne dust with the recently introduced EDC method was further investigated by selecting the most suitable of the three EIAs to measure and compare β-(1,3)-glucan levels in the EDC and in floor and actively collected airborne dust samples of the previously performed EDC validation study. The EDC β-(1,3)-glucan levels correlated moderately with β-(1,3)-glucans in actively collected airborne dust and floor dust samples, while the glucan levels in the airborne dust and floor dust samples did not correlate. The combination of the newly developed β-(1,3)-glucan sandwich EIA with EDC sampling now allows assessment in large-scale population studies of exposure to airborne β-(1,3)-glucans in homes or other low-exposure environments.β-(1,3)-Glucans are polysaccharides produced by plants, bacteria, and fungi. Their chain lengths, their degrees of branching, and the numbers and positions of their other glycosidic linkages, like β-(1,4)- and/or β-(1,6)-linkages, may vary largely. While β-(1,3)-(1,4)-glucan structures are typically found in plant material, β-(1,3)-(1,6)-chains are more prevalent in fungi and bacteria (31). Because they are typical microbe-associated molecular patterns (MAMPs), β-(1,3)-glucans activate cells of the innate immune system by binding to glucan-specific receptors like dectin-1 (1, 4, 6) and other cellular membrane receptors (5, 21). Associations between indoor β-(1,3)-glucan exposure and inflammatory reactions of the respiratory system have been reported (3, 10, 25, 33, 34, 40), but protective effects of glucan exposure in early childhood against the development of asthma and allergy have also been suggested (9, 13, 15, 29). β-(1,3)-Glucans are less potent inducers of inflammatory reactions than bacterial endotoxins (16, 30, 35), but since their total amounts in our environment may be much higher—glucans are measured in micrograms per milligram of house dust, whereas endotoxins are measured in nanograms per milligram of house dust (10, 14, 29, 37)—their proinflammatory impact may be similar to that of endotoxin exposure.An inexpensive and relatively simple β-(1,3)-glucan-specific inhibition immunoassay was introduced in the mid-1990s by Douwes et al. (8). This assay has found wide application in large-scale population studies in which glucans have been routinely measured in dust from mattresses and living room and/or bedroom floors (9, 10, 12, 13, 29). However, while useful for quantification of β-(1,3)-glucans in extracts with >1 to 2% (wt/vol) floor or mattress dust, the sensitivity of the assay is usually too low for airborne measurements. Even in environments with high microbial contaminations, like the household waste recycling industry (36), β-(1,3)-glucan levels in airborne dust samples may often remain under the limit of detection. Until recently, the only published methods sensitive enough to measure β-(1,3)-glucans in airborne dust samples were the modified Limulus amebocyte lysate (LAL) assay (a modification of the endotoxin assay with which glucans can be specifically detected [11]) and two sandwich enzyme immunoassays (EIAs) (2, 23, 27). Due to its high cost, which is at least 5-fold higher than that of the inhibition EIA, the LAL assay has thus far hardly been used in epidemiological studies. The assay developed by Sander et al. (27) has been applied to only a limited number of samples from the work environment, and the EIA described by Blanc et al. (2) and Rao et al. (23) has been used only to analyze reservoir and airborne dust samples from heavily mold-contaminated houses in New Orleans after the hurricanes Katrina and Rita. A third sensitive EIA makes use of galactosyl ceramide, a receptor specific for β-(1,3)-glucans (41), as the capture reagent and of a monoclonal antibody specific for β-(1,3)-(1,6)-glucans as the detecting antibody (20). Application of this EIA in population studies has, however, not yet been reported.Apart from the low sensitivity of the inhibition EIA and/or high cost of the modified LAL assay, the time, equipment, and budget needed for active sampling of airborne dust are reasons why epidemiological studies have relied mainly on β-(1,3)-glucan analyses of reservoir dust samples from floors or mattresses. β-(1,3)-Glucan levels in airborne dust samples may, however, be more representative of real inhalatory exposures.The aim of this study was to develop new sensitive but inexpensive assays for β-(1,3)-glucans in airborne dust from homes or other locations with low exposure levels. We combined methods and reagents from three laboratories that previously developed and applied β-glucan EIAs (2, 8, 23, 27). The specificities of available antibodies to a panel of 13 different glucans were determined to assess whether it is possible to develop sandwich assays that would show clear differences in specificities toward glucans from different taxonomic sources—bacterial, fungal, or plant derived—and/or between glucans with different chemical structures.Another objective of the present study was to explore the feasibility of using our recently developed passive airborne dust sampling method, the electrostatic dust fall collector (EDC) (22), for assessing exposure to glucans in airborne dust in the home environment, when combined with the new sensitive immunoassays.     

Dust–Ion–Acoustic Solitary Wave Structure in Magnetized Plasma with Nonthermally Distributed Electrons and Positrons

Plasma Physics Reports - The dust–ion–acoustic (DIA) solitary wave (SW) propagation in a magnetized dusty plasma consisting of mobile positive and heavy negative ions, nonthermal...     

Comparison of Two In Vitro Extraction Protocols for Assessing Metals’ Bioaccessibility Using Dust and Soil Reference Materials

The bioaccessibility of arsenic, cadmium, chromium, copper, lead, nickel, and zinc in four National Institute of Standards and Technology (NIST) standard reference materials and two Canadian dust samples as determined using the Solubility/Bioavailability Research Consortium (SBRC) in vitro procedure ranged from a low of 1.8% for chromium in standard reference material NIST 2711 to a high of 95.2% for cadmium in NIST 2584. The SBRC data were compared to data generated using a modified EN-71 Toy Safety protocol conducted at two different laboratories. Results for the two extraction methods compared well with differences between the means (SBRC vs. modified EN-71) generally less than 10% for the majority of the metals. These differences between the two extraction methods were negligible compared to variability caused by (a) the inherent heterogeneity of typical house dust samples and (b) differences in ICP-MS analytical approaches employed in the different laboratories. Results indicate that the modified EN-71 method is useful and appropriate as a relatively simple, rapid, and reproducible screening test for estimating metals’ bioaccessibility in soil and dust samples.     

Large-Scale Land Development,Fugitive Dust,and Increased Coccidioidomycosis Incidence in the Antelope Valley of California, 1999–2014

Ongoing large-scale land development for renewable energy projects in the Antelope Valley, located in the Western Mojave Desert, has been blamed for increased fugitive dust emissions and coccidioidomycosis incidence among the general public in recent years. Soil samples were collected at six sites that were destined for solar farm construction and were analyzed for the presence of the soil-borne fungal pathogen Coccidioides immitis which is endemic to many areas of central and southern California. We used a modified culture-independent nested PCR approach to identify the pathogen in all soil samples and also compared the sampling sites in regard to soil physical and chemical parameters, degree of disturbance, and vegetation. Our results indicated the presence of C. immitis at four of the six sites, predominantly in non-disturbed soils of the Pond-Oban complex, which are characterized by an elevated pH and salt bush communities, but also in grassland characterized by different soil parameters and covered with native and non-native annuals. Overall, we were able to detect the pathogen in 40% of the soil samples (n = 42). Incidence of coccidioidomycosis in the Antelope Valley was positively correlated with land use and particulate matter in the air (PM10) (Pearson correlation coefficient >0.5). With the predicted population growth and ongoing large-scale disturbance of soil in the Antelope Valley in coming years, incidence of coccidioidomycosis will likely further increase if policy makers and land developers continue to ignore the risk of grading land without implementing long-term dust mitigation plans in Environmental Impact Reports.     

Dust−ion acoustic freak wave propagation in a nonthermal mesospheric dusty plasma

Nonlinear properties of dust?ion acoustic freak waves have been studied in homogeneous unmagnetized dusty plasmas consisting of ions, nonthermal fast electrons, and positive and negative dust grains. By using derivative expansion method under the assumption of strongly dispersive medium, the basic equations are reduced to nonlinear Schrödinger equation (NLSE). One of NLSE solutions in the unstable region is the rational one which is responsible for creation of the freak waves. The dependence of the freak wave profile on the dust grain charge, carrier wavenumber, and energetic nonthermal electron population is discussed.     

Dust acoustic solitons in the dusty plasma of the Earth’s ionosphere

Plasma Physics Reports - Stratified structures that are observed at heights of 80–95 km in the lower part of the Earth’s ionosphere are known as noctilucent clouds and polar mesosphere...     

Effects of the Interactions between Dust Exposure and Genetic Polymorphisms in Nalp3, Caspase-1, and IL-1β on the Risk of Silicosis: A Case-Control Study

Objectives

To evaluate the effects of the interactions between polymorphisms in Nalp3, caspase-1, and interleukin(IL)-1β genes and occupational dust exposure on the risk of silicosis.

Methods

We conducted a population-based case-control study in a large iron mine in China. Between January 2006 and December 2009, we identified 179 patients with silicosis to evaluate as cases and 201 individuals without silicosis to evaluate as controls. We estimated cumulative dust exposure (CDE) for all subjects and we genotyped polymorphisms in Nalp3, caspase-1, and IL-1β genes. We estimated odds ratios(ORs), 95% confidence intervals(95%CIs), and p-values using logistic regression models adjusted for selected confounders.

Results

After adjusting for age, smoking status, and CDE, subjects with the CT genotype of Ex4-849C>T in Nalp3 and the GA genotype of Ex2+37G>A in caspase-1 had increased risks of silicosis (adjusted ORs[95%CIs] = 2.40 [1.12–5.12] and 3.62 [1.63–8.02], respectively). Among subjects younger than 70 years old, those with the CC genotype of IVS8-7652A>C in Nalp3 had a lower risk of silicosis than those with other genotypes (adjusted OR[95%CI] = 0.24[0.06–0.88]). Among subjects aged 70 years and older, those with the CT genotype of Ex4-849C>T in Nalp3 and those with the GA genotype of Ex2+37G>A in caspase-1 had a higher risk of silicosis than those with other genotypes (adjusted ORs [95%CI] = 2.52[1.04–6.12] and 5.19[1.88–14.35], respectively). Among subjects with CDE greater than 120 mg/m³×year and among smokers, those with the GA genotype of Ex2+37G>A in caspase-1 had a higher risk of silicosis than those with other genotypes (adjusted ORs[95%CIs] = 26.37[3.35–207.39] and 3.47[1.40–8.64], respectively).

Conclusions

Genetic polymorphisms in Nalp3 and caspase-1 may be associated with individual susceptibility to silicosis, especially when the polymorphisms interact with age, CDE, or smoking status.     

Analysis of the Fungal Flora in Environmental Dust Samples by PCR–SSCP Method

Conventional microbiological techniques yield only limited information on the composition of fungal communities in dust. The aim of this study was to establish and optimize PCR-single strand conformation polymorphism (PCR–SSCP) analysis for investigation of fungal diversity in rural dust samples. Three different DNA extraction protocols were tested on 38 fungal cultures. A total of six known universal fungal primer pairs were tested targeting the 18S rRNA gene, the 28S rRNA gene and the ITS region, respectively. Objective evaluation was performed with respect to the following parameters: efficiency to amplify all 38 strains; separation of seven species from different phylogenetic groups on the SSCP gel; additional bands in PCR–SSCP analysis; possibility to classify the amplified gene fragments to species level. Primer ITS1/ITS4 and PowerSoil? DNA isolation showed the best performance in most cases and were chosen for further analysis. The detection limit of the developed system was 200 CFU/g dust. Moreover, the reproducibility of the system could be demonstrated, leading to average profile similarities of 94.94 % [SD = 2.51] within gels, 93.03 % [SD = 4.69] between different days and 87.66 % [SD = 6.62] between different gels when testing shed and mattress dust samples. Sequencing allowed identification on species level, in detail: Alternaria alternata, Cladosporium sphaerospermum, Cladosporium cladosporioides as well as the yeasts Candida cabralensis and Candida catenulata. This demonstrates the adaptability of the method. In this study, a standardized system for fungal community analysis was developed that provides reproducible results applicable for epidemiological purposes.     

Formation of Microspherules of Lunar Regolith in Plasma–Dust Processes Initiated by Meteoroid Impacts

Plasma Physics Reports - The possibility of the formation of microspherules in plasma-dust processes initiated by meteoroids impacting the lunar surface is discussed. It is demonstrated that...     

Australian Dust Storm Associated with Extensive Aspergillus sydowii Fungal “Bloom” in Coastal Waters

A massive central Australian dust storm in September 2009 was associated with abundant fungal spores (150,000/m³) and hyphae in coastal waters between Brisbane (27°S) and Sydney (34°S). These spores were successfully germinated from formalin-preserved samples, and using molecular sequencing of three different genes (the large subunit rRNA gene [LSU], internal transcribed spacer [ITS[, and beta-tubulin gene), they were conclusively identified as Aspergillus sydowii, an organism circumstantially associated with gorgonian coral fan disease in the Caribbean. Surprisingly, no human health or marine ecosystem impacts were associated with this Australian dust storm event. Australian fungal cultures were nontoxic to fish gills and caused a minor reduction in the motility of Alexandrium or Chattonella algal cultures but had their greatest impacts on Symbiodinium dinoflagellate coral symbiont motility, with hyphae being more detrimental than spores. While we have not yet seen any soft coral disease outbreaks on the Australian Great Barrier Reef similar to those observed in the Caribbean and while this particular fungal population was non- or weakly pathogenic, our observations raise the possibility of future marine ecosystem pathogen impacts from similar dust storms harboring more pathogenic strains.     

Saharan Dust Impacts on Air Quality: What Are the Potential Health Risks in West Africa?

Despite the proximity of the Sahara, very few studies about dust impact on air quality and human health have been conducted in West Africa. The lack of data is a major constraint on our understanding of the impacts on human health in this area. We analyzed PM₁₀ concentrations and horizontal visibility recorded in four West African stations. The pollution levels often exceed the standards defined by many countries/regulatory authorities and have been associated with serious health risks outside Africa. Over the Sahelian stations, 45.6% of the days between November 2006 and March 2007 were likely to impact human health and the studied Sudanian population was exposed to potential health effects every 5 days.     

Resident CD11b+Ly6C? Lung Dendritic Cells Are Responsible for Allergic Airway Sensitization to House Dust Mite in Mice

Conventional dendritic cells (DCs) are considered to be the prime initiators of airway allergy. Yet, it remains unclear whether specific DC subsets are preferentially involved in allergic airway sensitization. Here, we systematically assessed the respective pro-allergic potential of individually sorted lung DC subsets isolated from house dust mite antigen (HDM)-treated donor mice, following transfer to naïve recipients. Transfer of lung CD11c⁺CD11b⁺ DCs, but not CD11c⁺CD11b⁻CD103⁺ DCs, was sufficient to prime airway allergy. The CD11c⁺CD11b⁺ DC subpopulation was composed of CD11c⁺CD11b⁺Ly6C⁺ inflammatory monocyte-derived cells, whose numbers increase in the lungs following HDM exposure, and of CD11c⁺CD11b⁺Ly6C⁻ DCs, which remain stable. Counterintuitively, only CD11c⁺CD11b⁺Ly6C⁻ DCs, and not CD11c⁺CD11b⁺Ly6C⁺ DCs, were able to convey antigen to the lymph nodes and induce adaptive T cell responses and subsequent airway allergy. Our results thus support that lung resident non-inflammatory CD11c⁺CD11b⁺Ly6C⁻ DCs are the essential inducers of allergic airway sensitization to the common aeroallergen HDM in mice.     

Syntheses and spectroscopic properties of α- and β-phosphatidylcholines and phosphatidylethanolamines

The widely used partial synthesis of phospholipids via deacylation of naturally occurring phospholipids, followed by reacylation with fatty acid anhydrides, is accompanied by phosphoryl migration. The resulting mixture of α- and β-phospholipids was separated by short-column chromatography. Milder acylation procedures in which no phosphoryl migration occurs, were developed. 1,2-Dilinoleoyl-sn-glycero-3-phosphocholine was prepared in 50% yield by acylation of sn-glycero-3-phosphocholine (GPC) with N-linoleoylimidazole. Detailed NMR and infrared spectra of α- and β-phosphatidylcholines (PCs) and -ethanolamines (PEs) are reported and the differences between isomers discussed.     

Phenotypic plasticity and longevity in plants and animals: cause and effect?

Immobile plants and immobile modular animals outlive unitary animals. This paper discusses competing but not necessarily mutually exclusive theories to explain this extreme longevity, especially from the perspective of phenotypic plasticity. Stem cell immortality, vascular autonomy, and epicormic branching are some important features of the phenotypic plasticity of plants that contribute to their longevity. Monocarpy versus polycarpy can also influence the kind of senescent processes experienced by plants. How density-dependent phenomena affecting the establishment of juveniles in these immobile organisms can influence the evolution of senescence, and consequently longevity, is reviewed and discussed. Whether climate change scenarios will favour long-lived or short-lived organisms, with their attendant levels of plasticity, is also presented.     

Dogmatisms and Catechisms — Ethics and Companion Animals

Abstract

The current reconsideration of the place in nature of human beings unfortunately continues to be an acrimonious one. All too often the debate is more akin to a warlike encounter where each side attempts to gain control or the upper hand than a search for points of agreement. Given this context, it is important to entertain views that emanate from different cultural traditions as a way to infuse the debate with new life. Students of Native American culture have consistently pointed out that the essential concepts of life balance and reciprocity represented there may serve as useful points of consideration as we struggle with the appropriate relationships with animals and nature. This article presents a representative Zuni story, told by Governor Robert E. Lewis, that illustrates these notions.     

DCCP and DICP： Construction and Analyses of Databases for Copper- and Iron-Chelating Proteins

Copper and iron play important roles in a variety of biological processes, especially when being chelated with proteins. The proteins involved in the metal binding, transporting and metabolism have aroused much interest. To facilitate the study on this topic, we constructed two databases （DCCP and DICP） containing the known copper- and iron-chelating proteins~ which are freely available from the website http：//sdbi.sdut.edu.cn/en. Users can conveniently search and browse all of the entries in the databases. Based on the two databases, bioinformatic analyses were performed, which provided some novel insights into metalloproteins.     

Biosynthesis of geraniol and nerol and their β-d-glucosides in Perlargonium graveolens and Rosa dilecta

1. 3R-[2-(14)C]Mevalonate was incorporated into geranyl and neryl beta-d-glucosides in petals of Rosa dilecta in up to 10.6% yield, and the terpenoid part was specifically and equivalently labelled in the moieties derived from isopentenyl pyrophosphate and 3,3-dimethylallyl pyrophosphate. A similar labelling pattern, with incorporations of 0.06-0.1% was found for geraniol or nerol formed in leaves of Pelargonium graveolens The former results provide the best available evidence for the mevalonoid route to regular monoterpenes in higher plants. 2. Incorporation studies with 3RS-[2-(14)C,(4R)-4-(3)H(1)]-mevalonate and its (4S)-isomer showed that the pro-4R hydrogen atom of the precursor was retained and the pro-4S hydrogen atom was eliminated in both alcohols and both glucosides. These results suggest that the correlation of retention of the pro-4S hydrogen atom of mevalonate with formation of a cis-substituted double bond, such as has been found in certain higher terpenoids, does not apply to the biosynthesis of monoterpenes. It is proposed that either nerol is derived from isomerization of geraniol or the two alcohols are directly formed by different prenyltransferases. Possible mechanisms for these processes are discussed. 3. The experiments with [(14)C,(3)H]mevalonate also show that in these higher plants, as has been previously found in animal tissue and yeast, the pro-4S hydrogen atom of mevalonate was lost in the conversion of isopentenyl pyrophosphate into 3,3-dimethylallyl pyrophosphate.