Novel peptide toxins from the sea anemone Stichodactyla haddoni

Four peptide toxins, SHTX I-III with crab-paralyzing activity and SHTX IV with crab lethality, were isolated from the sea anemone Stichodactyla haddoni and their primary structures elucidated by protein sequencing and cDNA cloning. SHTX I (new toxin, 28 residues), II (analogue of SHTX I, 28 residues) and III (Kunitz-type protease inhibitor, 62 residues) are potassium channel toxins and SHTX IV (48 residues) is a member of the type 2 sea anemone sodium channel toxins. The precursor protein of SHTX IV is composed of a signal peptide, propart and mature peptide, while the propart is missing in that of SHTX III. In addition to these four toxins, an epidermal growth factor-like peptide was detected in S. haddoni by RT-PCR.     

Analysis of Histones from the Endosymbiont Nucleus of a Binucleate Dinoflagellate1,2

Histones were prepared from chromatin of the eukaryotic (endosymbiont) nucleus of Peridinium balticum (Levander) Lemmermann. The amino acid composition of whole histone was rich in lysine and similar to that of Olisthodiscus luteus and Euglena gracilis. Electropheretic analysis of these proteins in acidic-urea disc gels revealed four major bands: one with a mobility slightly lower than that of calf thymus HI; and three others which comigrated with calf H2B, H2A, and H4, respectively. The low mobility band was soluble in 5% perchloric acid and was sensitive to FeCl₃ destaining. Electrophoresis in slab gels containing 0.1% SDS revealed five major components, with approximate molecular weights of 23,000, 20,000, 15,000, 13,000, and 11,000, respectively. The 15,000 and 11,000 dalton histones had mobilities identical to those of calf H3 and H4, respectively. The two highest molecular weight components were soluble in 5% perchloric acid. No bands were found to comigrate with calf H2A or H2B but a band was present that migrated to a position intermediate between calf H2A and H4 (13,000 dalton histone). Two-dimensional gels consisting of acidic-urea gels in the first dimension and SDS gels in the second dimension revealed that the 20,000 dalton component and the 13,000 dalton component are not resolved in the acidic-urea gel. As a working hypothesis, it is suggested that two of the five bands seen in SDS gels represent an H1-like doublet, and two are analagous to H3 and H4, respectively. The remaining histone may replace H2A and H2B.     

Seasonal Preservation Success of the Marine Dinoflagellate Coral Symbiont,Symbiodinium sp.

Coral reefs are some of the most diverse and productive ecosystems on the planet, but are threatened by global and local stressors, mandating the need for incorporating ex situ conservation practices. One approach that is highly protective is the development of genome resource banks that preserve the species and its genetic diversity. A critical component of the reef are the endosymbiotic algae, Symbiodinium sp., living within most coral that transfer energy-rich sugars to their hosts. Although Symbiodinium are maintained alive in culture collections around the world, the cryopreservation of these algae to prevent loss and genetic drift is not well-defined. This study examined the quantum yield physiology and freezing protocols that resulted in survival of Symbiodinium at 24 h post-thawing. Only the ultra-rapid procedure called vitrification resulted in success whereas conventional slow freezing protocols did not. We determined that success also depended on using a thin film of agar with embedded Symbiodinium on Cryotops, a process that yielded a post-thaw viability of >50% in extracted and vitrified Symbiodinium from Fungia scutaria, Pocillopora damicornis and Porites compressa. Additionally, there also was a seasonal influence on vitrification success as the best post-thaw survival of F. scutaria occurred in winter and spring compared to summer and fall (P < 0.05). These findings lay the foundation for developing a viable genome resource bank for the world’s Symbiodinium that, in turn, will not only protect this critical element of coral functionality but serve as a resource for understanding the complexities of symbiosis, support selective breeding experiments to develop more thermally resilient strains of coral, and provide a ‘gold-standard’ genomics collection, allowing for full genomic sequencing of unique Symbiodinium strains.     

Three New Cytotoxic Acylspermidines from the Soft Coral,Sinularia sp.

Three new acylated spermidines and two known related compounds were isolated from the Okinawan soft coral, Sinularia sp. These compounds were N′,N″,N″-trimethylspermidines that are acylated by a methyl-branched unsaturated fatty acid. These acylspermidines showed potent cytotoxicity against human tumor cell lines at an IC₅₀ value of 17 ng/ml and the induction of apoptotic phenomena.     

A New Endosymbiont in Late Ordovician Tabulate Corals from Anticosti Island,Eastern Canada

Cylindrical tubes of the trace fossil Chaetosalpinx occur within the skeletal walls of Late Ordovician sarcinulid tabulate corals preserved on Anticosti Island. A large host-specific embedment structure, Chaetosalpinx rex isp. nov., is described from the reefal sarcinulid genus Columnopora that occurs in (Rawtheyan, Ashgill) coral-stromatoporoid patch reefs of the upper Vauréal Formation (Mill Bay Member). While locally abundant in Columnopora, this newly described embedment structure is absent in other frame-builders in the reefs.     

北海抹香鲸的年龄鉴定

将2001年5月在广西琼州海峡获得的一头体长约18．0m的特大型雄性抹香鲸(Physeter macrocephalus)遗骸的下颌齿,用自制的器械将齿沿着纵向锯成厚约1～5mm的10个薄片,用600目和2000目的金砂纸精磨和抛光至约150μm。由9位具有用耳石或鳞片鉴定鱼类年龄经验的学者,用肉眼和解剖镜观察齿纵切面的微观结构和轮纹特征。根据对牙齿磨片牙骨质和牙齿齿质上的生长层组判断,其年龄约为29龄。     

Systematics of a Kleptoplastidal Dinoflagellate,Gymnodinium eucyaneum Hu (Dinophyceae), and Its Cryptomonad Endosymbiont

New specimens of the kleptoplastidal dinoflagellate Gymnodinium eucyaneum Hu were collected in China. We investigated the systematics of the dinoflagellate and the origin of its endosymbiont based on light morphology and phylogenetic analyses using multiple DNA sequences. Cells were dorsoventrally flattened with a sharply acute hypocone and a hemispherical epicone. The confusion between G. eucyaneum and G. acidotum Nygaard still needs to be resolved. We found that the hypocone was conspicuously larger than the epicone in most G. eucyaneum cells, which differed from G. acidotum, but there were a few cells whose hypocone and epicone were of nearly the same size. In addition, there was only one site difference in the partial nuclear LSU rDNA sequences of a sample from Japan given the name G. acidotum and G. eucyaneum in the present study, which suggest that G. eucyaneum may be a synonym of G. acidotum. Spectroscopic analyses and phylogenetic analyses based on nucleomorph SSU rDNA sequences and chloroplast 23 s rDNA sequences suggested that the endosymbiont of G. eucyaneum was derived from Chroomonas (Cryptophyta), and that it was most closely related to C. coerulea Skuja. Moreover, the newly reported kleptoplastidal dinoflagellates G. myriopyrenoides and G. eucyaneum in our study were very similar, and the taxonomy of kleptoplastidal dinoflagellates was discussed.     

Extending the Record of Terpenes from Soft Coral Sarcophyton mililatensis

In the present study, a new polyoxygenated cembranoid named sarcomililatol H ( 1 ) as well as six known terpenes 2 – 7 with different skeletons were isolated from South China Sea soft coral Sarcophyton mililatensis. Based on the comprehensive analyses of 1D and 2D NMR spectroscopic data, the structure of the new compound 1 was established. This new cembranoid was characterized by the presence of the rarely encountered tetrahydropyran ring with the ether linkage across C-2 and C-12. By applying the time-dependent density functional theory electronic circular dichroism (TDDFT ECD) approach, the absolute configuration of sarcomililatol H ( 1 ) was determined. All of the isolates were subjected to the anti-inflammatory and anti-tumor bioassays. However, none of them was active in these evaluations. Additionally, the preliminary virtual screening of inhibitory against SARS-CoV-2 by molecular docking showed that diterpene 1 could be regarded as a SARS-CoV-2 main protease (M^pro) inhibitor (binding energy: −7.63 kcal/mol). The discovery of these terpenes has expanded the chemical diversity and complexity of terpenes from the species S. mililatensis.     

Length–weight relationships of five commercial fish species from the Strait of Hormuz in the Persian Gulf

Length‐weight relationships are described for five fish species from the coast of the Hormuz Strait in the Persian Gulf, Iran. Specimens were collected between August 2010 and July 2011 using shrimp beam trawls, gill nets and intertidal fishing weirs. Relationships for three of the species had no previous data in the international science global databank on fishes: www.FishBase.org . A new maximum length was recorded for Acanthopagrus latus.     

软珊瑚Nephthea sp.中新生物碱分离与结构鉴定(英文)

一个新的化合物Nephoxaloid(1)具有独特的三环骨架结构和一个已知的化合物蕨藻素Caulerpin(2)从中国国西沙群岛的软珊瑚Nephthea sp.中分离得到。通过NMR和MS对它们的平面结构进行分析,化合物(1)和(2)对少数癌细胞株具有细胞毒性作用也有报道。     

Bioactive Xenicane Diterpenoids from the Taiwanese Soft Coral Asterospicularia laurae

Chemical investigation of the Taiwanese soft coral Asterospicularia laurae has led to the isolation of three new xenicane diterpenoids, named asterolaurins K–M ( 1 – 3 , resp.). Their chemical structures were determined through extensive spectroscopic analyses (¹H‐ and ¹³C‐NMR, ¹H,¹H‐COSY, HMBC, and NOESY). Compound 2 exhibited cytotoxic activity against HEp‐2, Daoy, MCF‐7, and WiDr tumor cells.     

Crassocolides G–M,Cembranoids from the Formosan Soft Coral Sarcophyton crassocaule

Seven new polyoxygenated cembranoids possessing an α‐methylene‐γ‐lactone group, crassocolides G–M ( 1 – 7 , resp.), have been isolated from the AcOEt extract of the Formosan soft coral Sarcophyton crassocaule. The structures of compounds 1 – 7 were established by detailed spectroscopic analyses, including 2D‐NMR spectroscopy (¹H,¹H‐COSY, HMQC, HMBC, and NOESY), while the absolute configuration of 1 was determined using a modified reaction of Mosher's method. The cytotoxicity of compounds 1 – 7 against a limited panel of cancer cell lines was also determined.     

Anti-Inflammatory Steroids from the South China Sea Soft Coral Lobophytum sarcophytoides

Three new steroids, along with two known related analogs, were isolated from the Xisha Island soft coral Lobophytum sarcophytoides. The structures and absolute configurations of the new compounds were elucidated by extensive spectroscopic data analyses, time dependent density functional theory electronic circular dichroism calculation, and comparison with the spectral data previously reported in the literature. In in vitro bioassay, four compounds showed interesting suppressive effects on lipopolysaccharide (LPS) induced inflammation in BV-2 microglial cells at 10 μM level.     

Cyclopentenone Derivatives and Polyhydroxylated Steroids from the Soft Coral Sinularia acuta

Four new polyhydroxylated steroids, 1 – 4 , and the racemic form of cyclopentenone 9 , together with four known steroids, 5 – 8 , one known cyclopentenone derivative, 10 , and one known butenolide derivative, 11 , were isolated from the soft coral Sinularia acuta collected from Weizhou Island of Guangxi Province, P. R. China. Their structures were elucidated on the basis of spectroscopic analyses and by comparison of the corresponding data with those previously reported. The cytotoxicities of the isolates 1 – 11 in vitro against the selected tumor cell lines HL‐60, HeLa, and K562 were evaluated. Compounds 2 and 5 showed potent cytotoxicities against HL‐60 cell lines with IC₅₀ values of 7.3 and 9.9 μM , respectively. Compounds 5 and 6 showed moderate activities against K562 cell lines with IC₅₀ values of 10.9 and 11.7 μM , respectively, while compounds 1, 2 , and 6 showed weak activities against HeLa cell lines with respective IC₅₀ values of 44.8, 27.1, and 18.2 μM . This is the first report on chemical and bioactivity research of S. acuta.     

Two New Cembranoids from the Chinese Soft Coral Sarcophyton boettgeri**

Two new cembranoids, namely sarcoboettgerols D and E, together with four known related ones, have been isolated from the soft coral Sarcophyton boettgeri collected from Weizhou Island in the South China Sea. Their structures including absolute configurations were elucidated by extensive spectroscopic analysis, quantum mechanical nuclear magnetic resonance methods, time-dependent density functional theory-electronic circular dichroism calculations, as well as comparison with the reported data in the literature. A plausible biogenetic relationship of four cembranoids was proposed. In bioassays, sarcomililatin B exhibited cytotoxic activity against H1299 cell (IC₅₀=35.0 μM), whereas sarcomililatin B and sarcomililatin A displayed moderate antibacterial activities (MIC 17.4–34.8 μg/mL).     

Saddleback Deformities in Fish Species Collected from the Arabian Gulf Coast of Jubail City,Saudi Arabia

The saddleback syndromes were observed in several commercial fishes obtained from Saudi Arabian coast of the Arabian Gulf. These deformities resulting in missing dorsal spines or rays, sometimes accompanied by a depression in the dorsal profile, were found in ten fish species from seven families. Other morphological abnormalities such as scale disturbances, lateral line deformity, and kyphosis, the presence of a lesion, slight ambicoloration, and supraneural deformities accompanying the saddleback deformity were also observed. The occurrence of similar deformities across such a spectrum of fishes from the same location suggests that the abnormalities were induced by something in the environment common to all these species.     

Dynamic Stability of Coral Reefs on the West Australian Coast

Monitoring changes in coral cover and composition through space and time can provide insights to reef health and assist the focus of management and conservation efforts. We used a meta-analytical approach to assess coral cover data across latitudes 10–35°S along the west Australian coast, including 25 years of data from the Ningaloo region. Current estimates of coral cover ranged between 3 and 44% in coral habitats. Coral communities in the northern regions were dominated by corals from the families Acroporidae and Poritidae, which became less common at higher latitudes. At Ningaloo Reef coral cover has remained relatively stable through time (∼28%), although north-eastern and southern areas have experienced significant declines in overall cover. These declines are likely related to periodic disturbances such as cyclones and thermal anomalies, which were particularly noticeable around 1998/1999 and 2010/2011. Linear mixed effects models (LME) suggest latitude explains 10% of the deviance in coral cover through time at Ningaloo. Acroporidae has decreased in abundance relative to other common families at Ningaloo in the south, which might be related to persistence of more thermally and mechanically tolerant families. We identify regions where quantitative time-series data on coral cover and composition are lacking, particularly in north-western Australia. Standardising routine monitoring methods used by management and research agencies at these, and other locations, would allow a more robust assessment of coral condition and a better basis for conservation of coral reefs.     

细微短足软珊瑚的化学成分研究

本文对采自广西涠洲岛海域细微短足软珊瑚（Cladiellasubtilis）的化学成分进行研究,经理化常数和波谱数据分析,分别鉴定为（20R,24S）-5-烯-21羧基-麦角甾-3β-醇（1）、柳珊瑚甾醇（2）、鲨肝醇（3）及麦角甾-5-烯-3β-醇（4）。对细微短足软珊瑚（Cladiella subtilis）化学成分的研究尚属首次。     

New Steroids from the South China Sea Soft Coral Lobophytum sp.

Two new steroids, (22R,23S)‐3β‐hydroxy‐23‐methyl‐17,20‐epoxyergost‐5‐en‐22‐yl acetate and (22R,23S)‐5‐hydroperoxy‐23‐methyl‐5α‐17,20‐epoxyergost‐6‐ene‐3β,22‐diol, were isolated from the South China Sea soft coral Lobophytum sp., together with two related known ones. The structures of all compounds were elucidated by extensive spectroscopic analysis and by comparing their spectral data with those previously reported. The structure of (22R,23S)‐3β‐hydroxy‐23‐methyl‐17,20‐epoxyergost‐5‐en‐22‐yl acetate was further confirmed through chemical correlation. All the isolates were evaluated for the in vitro inhibitory activity against NF‐κB, a potential target for the treatment of cancer, and (22R,23S)‐5‐hydroperoxy‐23‐methyl‐5α‐17,20‐epoxyergost‐6‐ene‐3β,22‐diol exhibited moderate inhibition activity with IC₅₀ value of 8.96 μg/mL.