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1.
Tropospheric ozone is considered the most detrimental air pollutant for vegetation at the global scale, with negative consequences for both provisioning and climate regulating ecosystem services. In spite of recent developments in ozone exposure metrics, from a concentration‐based to a more physiologically relevant stomatal flux‐based index, large‐scale ozone risk assessment is still complicated by a large and unexplained variation in ozone sensitivity among tree species. Here, we explored whether the variation in ozone sensitivity among woody species can be linked to interspecific variation in leaf morphology. We found that ozone tolerance at the leaf level was closely linked to leaf dry mass per unit leaf area (LMA) and that whole‐tree biomass reductions were more strongly related to stomatal flux per unit leaf mass (r2 = 0.56) than to stomatal flux per unit leaf area (r2 = 0.42). Furthermore, the interspecific variation in slopes of ozone flux–response relationships was considerably lower when expressed on a leaf mass basis (coefficient of variation, CV = 36%) than when expressed on a leaf area basis (CV = 66%), and relationships for broadleaf and needle‐leaf species converged when using the mass‐based index. These results show that much of the variation in ozone sensitivity among woody plants can be explained by interspecific variation in LMA and that large‐scale ozone impact assessment could be greatly improved by considering this well‐known and easily measured leaf trait.  相似文献   

2.
This article reports a detailed taphonomic study of the reference Miocene vertebrate site of Cerro de la Garita, (Concud, Teruel, Spain). The sedimentary record of the site indicates that it was a palaeo‐lakeshore, and this conclusion is supported by aquatic environment‐related taphonomic modifications of its fossils (both on their surfaces and internally). The site provided a water source that appears to have been regularly visited by herbivores. It was, therefore, also likely to have been a good feeding ground for predators and scavengers. Hyaena coprolites have been found at the site, and tooth marks were identified on some fossil bone surfaces. Bone fragments 2–5 cm in length showed clear evidence of heavy digestion and probable regurgitation. Abundant trampling marks were seen on the surface of many of the fossil bones, traits that are congruent with a damp lakeshore environment. Most of the remains were broken, and only a few anatomical elements belonging to the same individual were found close together, although never articulated (i.e. in a manner reflecting their anatomical connections). The fossils showed no signs of selection (either by shape or size) or abrasion, although a certain re‐orientation suggests the influence of wave or strand line activity. Despite being an open‐air site, none of the fossils appeared to be weathered, further suggesting that the surrounding environment was a damp lakeshore probably shaded by vegetation. Indeed, abundant signs of root activity were observed. No evidence of reworking, that is, post‐burial disturbance or diachronic mixing of fossils, was seen, confirming the international value of Cerro de la Garita as a reference site for continental Miocene mammal assemblages.  相似文献   

3.
The present study was undertaken with the objective to investigate the intraspecific variation of Channa punctatus on the basis of morphometric characters using the truss network system that was constructed from the fish body. Fish samples were collected from the Narora (n = 62) and Kanpur sites (n = 46) of the Ganga River, the Firozabad site in the Yamuna River (n = 66) and at the Lucknow site of the Gomti River (n = 60). Data were subjected to principal component analysis, discriminant function analysis and univariate analysis of variance. The first principal component (PC I) analysis explained 47.75% of total variation while PC II and PC III explained 8.18 and 7.48%, respectively. The step‐wise discriminant function analysis retained seven variables that significantly discriminated the populations. Using these variables 81.85% of the original groups were classified into their correct samples. Misclassification was higher for the samples from Ganga River (19.6% at the Kanpur site and 19.4% for the Narora site). Of the total 27 transformed morphometric measurements, 23 exhibited significant differences among the populations. These findings indicate the presence of different stocks of fish from the three rivers.  相似文献   

4.
Etoliko, an anoxic semi-enclosed basin, is part of a complex wetland in Western Greece extremely rich in biodiversity. It covers an area of 1,700 ha with an atypical orientation that has been formed tectonically. In order to identify the main factors influencing the bacterial profile at the Etoliko basin, 48 samples were collected, representing seasonal variation at four sampling stations. Physico-chemical analysis of the samples indicates the presence of three layers in the Etoliko basin: (1) low-density surface layer, (2) a layer with a steep density gradient, and (3) dense water below a depth of 20 m. A permanent halocline, whose thickness is varying seasonally, has been identified in the Etoliko basin water column, while the spatiotemporal salinity distribution was highly affected by the basin’s interaction with the nearby Messolonghi lagoon. The anoxic zone extends from 20 m below the surface to the bottom of the Etoliko basin in summer, while the bottom layer was hypoxic during winter. Bacterial populations were analyzed by Automated Ribosomal Intergenic Spacer Analysis (ARISA). Bacterial richness and diversity were calculated and compared across samples. Hierarchical analysis showed that ARISA clustered the surface water samples according to seasonal variation, while sediment and near-to-bottom water samples appear to be stable and to cluster together. Non-metric multidimensional scaling (MDS) indicates that bacterial composition depends on dissolved oxygen and salinity. Increase in salinity of the ecosystem leads to a significant reduction of the microbial diversity.  相似文献   

5.
Quantitative analysis of the distribution of dispersed spores and pollen (sporomorphs) has been used to assess temporal floral variation through the Middle Jurassic Ravenscar Group (Aalenian–Bathonian), North Yorkshire, UK. Aalenian, Bajocian and Bathonian strata possess relatively distinct sporomorph and palynofacies assemblages, which potentially reflect a dynamic history regarding the nature of parent vegetation. Specifically, Aalenian palynofloras are composed of a heterogeneous mixture of conifers, ferns, simple monosulcate pollen producers, sphenophytes and Caytoniales; Bajocian palynofloras are codominated by conifers and ferns; and Bathonian palynofloras are highly rich and contain assemblages of abundant ferns, conifers, lycophytes, pteridosperms/conifers and Caytoniales. Individual‐ and sample‐based rarefaction demonstrates that Bathonian samples are richer than Aalenian and Bajocian samples. Temporal variations in assemblages are a result of long‐term depositional and possible climatic fluctuations through the Middle Jurassic. Ordinations of sporomorph data using non‐metric multidimensional scaling (NMDS) demonstrate that short‐term variations between samples are largely governed by taphonomic biases as a result of slight changes in depositional processes, which give rise to highly variable catchment areas that supply deposits with sporomorphs. Long‐term compositional changes are apparent in sporomorph assemblages regardless of lithology/local depositional environments, suggesting that long‐term variations are more substantial than short‐term variations and potentially include genuine regional temporal changes in parent vegetation. Relating sporomorph assemblages with their respective depositional environments and relative catchment area sizes using lithological and palynofacies information suggests that the basin interior was occupied by mostly low‐standing species and extrabasinal vegetation was dominated by coniferous taxa. Comparisons of the dispersed sporomorph and plant megafossil records indicate that both fossil assemblages reflect different aspects of the palaeoflora due to a multitude of taphonomic and ecological biases. Such biases include variation in sporomorph production levels, depositional environment and differential sporomorph and parent plant durability.  相似文献   

6.
Carnosol is a natural compound with pharmacological action due to its anti‐cancer properties. However, the precise mechanism for its anti‐carcinogenic effect remains elusive. In this study, we used lymphoblastoid TK6 cell lines to identify the DNA damage and repair mechanisms of carnosol. Our results showed that carnosol induced DNA double‐strand breaks (DSBs). We also found that cells lacking tyrosyl‐DNA phosphodiesterase 1 (TDP1), an enzyme related to topoisomerase 1 (TOP1), and tyrosyl‐DNA phosphodiesterase 2 (TDP2), an enzyme related to topoisomerase 2 (TOP2), were supersensitive to carnosol. Carnosol was found to induce the formation of the TOP1‐DNA cleavage complex (TOP1cc) and TOP2‐DNA cleavage complex (TOP2cc). When comparing the accumulation of γ‐H2AX foci and the number of chromosomal aberrations (CAs) with wild‐type (WT) cells, the susceptivity of the TDP1?/? and TDP2?/? cells were associated with an increased DNA damage. Our results provided evidence of carnosol inducing DNA lesions in TK6 cells and demonstrated that the damage induced by carnosol was associated with abnormal topoisomerase activity. We conclude that TDP1 and TDP2 play important roles in the anti‐cancer effect of carnosol.  相似文献   

7.
8.
TDP‐43 is an RNA‐binding protein active in splicing that concentrates into membraneless ribonucleoprotein granules and forms aggregates in amyotrophic lateral sclerosis (ALS) and Alzheimer's disease. Although best known for its predominantly disordered C‐terminal domain which mediates ALS inclusions, TDP‐43 has a globular N‐terminal domain (NTD). Here, we show that TDP‐43 NTD assembles into head‐to‐tail linear chains and that phosphomimetic substitution at S48 disrupts TDP‐43 polymeric assembly, discourages liquid–liquid phase separation (LLPS) in vitro, fluidizes liquid–liquid phase separated nuclear TDP‐43 reporter constructs in cells, and disrupts RNA splicing activity. Finally, we present the solution NMR structure of a head‐to‐tail NTD dimer comprised of two engineered variants that allow saturation of the native polymerization interface while disrupting higher‐order polymerization. These data provide structural detail for the established mechanistic role of the well‐folded TDP‐43 NTD in splicing and link this function to LLPS. In addition, the fusion‐tag solubilized, recombinant form of TDP‐43 full‐length protein developed here will enable future phase separation and in vitro biochemical assays on TDP‐43 function and interactions that have been hampered in the past by TDP‐43 aggregation.  相似文献   

9.
In this study the intraspecific variation of wild Labeo rohita was investigated on the basis of morphometric characters using the truss network system constructed from the fish body. Altogether 435 fish samples were collected from six drainages of the Ganga basin in India. Data were subjected to principal component analysis, discriminant function analysis and univariate analysis of variance. The first principal component (PC1) explained 47.88% of the total variation, while PC2 and PC3 explained 17.22 and 8.33%, respectively. The step‐wise discriminant function analysis retained three variables that significantly discriminated the populations. Using these variables, 62.3% of the original groups were classified into their correct samples and 53.1% of the cross‐validated groups omitting one procedure were classified into their correct samples. Misclassification was higher for samples from the River Gomti (28.6%). Of the total of 31 transformed truss measurements, 30 exhibited significant differences among populations. These findings indicate the presence of six different stocks of L. rohita in the Ganga basin.  相似文献   

10.
11.
Bryophytes dominate some ecosystems despite their extraordinary sensitivity to habitat quality. Nevertheless, some species behave differently across various regions. The existence of local adaptations is questioned by a high dispersal ability, which is thought to redistribute genetic variability among populations. Although Sphagnum warnstorfii is an important ecosystem engineer in fen peatlands, the causes of its rather wide niche along the pH/calcium gradient are poorly understood. Here, we studied the genetic variability of its global populations, with a detailed focus on the wide pH/calcium gradient in Central Europe. Principal coordinates analysis of 12 polymorphic microsatellite loci revealed a significant gradient coinciding with water pH, but independent of geography; even samples from the same fens were clearly separated along this gradient. However, most of the genetic variations remained unexplained, possibly because of the introgression from phylogenetically allied species. This explanation is supported by the small heterogeneous cluster of samples that appeared when populations morphologically transitional to S. subnites, S. rubellum, or S. russowii were included into the analysis. Alternatively, this unexplained variation might be attributed to a legacy of glacial refugia with recently dissolved ecological and biogeographic consequences. Isolation by distance appeared at the smallest scale only (up to 43 km). Negative spatial correlations occurred more frequently, mainly at long distances (up to 950 km), implying a genetic similarity among samples which are very distant geographically. Our results confirm the high dispersal ability of peatmosses, but simultaneously suggested that their ability to cope with a high pH/calcium level is at least partially determined genetically, perhaps via specific physiological mechanisms or a hummock‐forming ability.  相似文献   

12.
Bas Auran, in south‐eastern France, is the candidate area for Global Boundary Stratotype Section and Point (GSSP) of the base of the Bathonian Stage (Middle Jurassic). In the Bas Auran area, upper Bajocian and lower Bathonian deposits are made up of limestone beds alternating with marls that correspond to the ‘Marno‐calcaires àCancellophycus’, below the ‘Terres Noires’ Formation. Taphonomic analyses of the successive ammonoid fossil assemblages provide new and complementary data for biostratigraphic completeness, palaeoenvironmental setting and sequence stratigraphy. Lithologic differentiation between limestone and marl intervals resulted from alternating episodes of carbonate input and starvation. Both lithologic phases may contain evidence for sedimentary and taphonomic reworking, associated with scours, that reflects low rates of sedimentation and stratigraphic condensation. Three successive types of elementary cycles resulted from increasing rates of stratigraphic condensation, sedimentary condensation and substrate stabilization during early Bathonian. The occurrence of reelaborated ammonoids (i.e. exhumed and displaced before their final burial) implies that tractive current flows or winnowing affected the burial of concretionary internal moulds. In the lower Bathonian strata, the dominance of homogeneous concretionary internal moulds of phragmocones, completely filled with sediment, is indicative of low rates of sedimentation and sediment accumulation, respectively associated with low degrees of stratigraphic and sedimentary condensation. However, at the Bajocian/Bathonian transition, hemipelagic, bed‐scale limestone–marl alternations show a maximum value of biostratigraphic completeness and there is no evidence for taphonomic condensation in the ammonoid fossil assemblages. Taphonomic analyses of the successive ammonoid fossil assemblages and taphofacies confirm the development of a deepening phase associated with sedimentary starvation, which characterizes the last episode within the deepening half‐cycle of third and second order cycles, in the Bas Auran area of French Subalpine Basin during early Bathonian.  相似文献   

13.
Aim To assess the relative roles of environment and space in driving bird species distribution and to identify relevant drivers of bird assemblage composition, in the case of a fine‐scale bird atlas data set. Location The study was carried out in southern Belgium using grid cells of 1 × 1 km, based on the distribution maps of the Oiseaux nicheurs de Famenne: Atlas de Lesse et Lomme which contains abundance for 103 bird species. Methods Species found in < 10% or > 90% of the atlas cells were omitted from the bird data set for the analysis. Each cell was characterized by 59 landscape metrics, quantifying its composition and spatial patterns, using a Geographical Information System. Partial canonical correspondence analysis was used to partition the variance of bird species matrix into independent components: (a) ‘pure’ environmental variation, (b) spatially‐structured environmental variation, (c) ‘pure’ spatial variation and (d) unexplained, non‐spatial variation. Results The variance partitioning method shows that the selected landscape metrics explain 27.5% of the variation, whilst ‘pure’ spatial and spatially‐structured environmental variables explain only a weak percentage of the variation in the bird species matrix (2.5% and 4%, respectively). Avian community composition is primarily related to the degree of urbanization and the amount and composition of forested and open areas. These variables explain more than half of the variation for three species and over one‐third of the variation for 12 species. Main conclusions The results seem to indicate that the majority of explained variation in species assemblages is attributable to local environmental factors. At such a fine spatial resolution, however, the method does not seem to be appropriated for detecting and extracting the spatial variation of assemblages. Consequently, the large amount of unexplained variation is probably because of missing spatial structures and ‘noise’ in species abundance data. Furthermore, it is possible that other relevant environmental factors, that were not taken into account in this study and which may operate at different spatial scales, can drive bird assemblage structure. As a large proportion of ecological variation can be shared by environment and space, the applied partitioning method was found to be useful when analysing multispecific atlas data, but it needs improvement to factor out all‐scale spatial components of this variation (the source of ‘false correlation’) and to bring out the ‘pure’ environmental variation for ecological interpretation.  相似文献   

14.
There have been surprisingly few empirical investigations of the fundamental principle that the architecture of depositional sequences exerts considerable control on observed patterns of faunal distribution and replacement. In this paper, we examine trilobite associations in two sequences of the Upper Ordovician (Sandbian) Bromide Formation of southern Oklahoma. Cluster analysis and ordination of genus abundance data identified five lithofacies‐related biofacies that are also differentiated by diversity patterns. Biofacies of the transgressive system tract (TST) of successive sequences are more similar to each other than they are to biofacies in the highstand systems tract (HST) of the same sequence. This similarity likely records dominance of large, robust convex sclerites in taphonomically degraded samples from condensed, strongly winnowed grainstone and rudstone. Horizons with articulated exoskeletons of isoteline trilobites preserved by obrution deposits occur most commonly in the early HST and record behavioural aggregations. Grainstone and rudstone of the later HST are less winnowed than those of the TST and show less fragmentation and sorting of sclerites. These changes in taphonomic conditions preserve ecological patterns more clearly. In most biofacies, rarefied alpha diversity (samples) and gamma diversity (biofacies) of middle‐ and outer‐ramp HST deposits are greater than in the TSTs, and biofacies replace each other down ramp. Diversity patterns do not agree with model predictions and other data sets that indicate low beta and high alpha diversity in the TST, likely because of taphonomic degradation. Vertical replacement of biofacies is expressed by the appearance of peritidal facies in which trilobites are rare. Biofacies shifts also characterize sequence boundaries and are most profound in the inner‐ramp successions characterized by sharp facies offsets. Comparison with bathymetrically similar deposits in the Taconic foreland basin showed similar diversity trends along environmental gradients, with some differences in shallow‐water settings attributed to taphonomic differences.  相似文献   

15.
Is feeding ecology the main driver of beak diversification in modern birds? Taking a broad‐scale interspecific comparative approach, Navalón et al. (2019) found a relationship between feeding ecology (diet and feeding behavior) and beak morphology (shape and leverage), although much of the observed variation remained unexplained. This low explanatory power may suggest that variation in the multitude of nonfeeding functions of the beak also influences its evolution.  相似文献   

16.
Numerous deep‐sea species have apparent widespread and discontinuous distributions. Many of these are important foundation species, structuring hard‐bottom benthic ecosystems. Theoretically, differences in the genetic composition of their populations vary geographically and with depth. Previous studies have examined the genetic diversity of some of these taxa in a regional context, suggesting that genetic differentiation does not occur at scales of discrete features such as seamounts or canyons, but at larger scales (e.g. ocean basins). However, to date, few studies have evaluated such diversity throughout the known distribution of a putative deep‐sea species. We utilized sequences from seven mitochondrial gene regions and nuclear genetic variants of the deep‐sea coral Paragorgia arborea in a phylogeographic context to examine the global patterns of genetic variation and their possible correlation with the spatial variables of geographic position and depth. We also examined the compatibility of this morphospecies with the genealogical‐phylospecies concept by examining specimens collected worldwide. We show that the morphospecies P. arborea can be defined as a genealogical‐phylospecies, in contrast to the hypothesis that P. arborea represents a cryptic species complex. Genetic variation is correlated with geographic location at the basin‐scale level, but not with depth. Additionally, we present a phylogeographic hypothesis in which P. arborea originates from the North Pacific, followed by colonization of the Southern Hemisphere prior to migration to the North Atlantic. This hypothesis is consistent with the latest ocean circulation model for the Miocene.  相似文献   

17.
Climate and litter quality have been identified as major drivers of litter decomposition at large spatial scales. However, the role played by soil fauna remains largely unknown, despite its importance for litter fragmentation and microbial activity. We synthesised litterbag studies to quantify the effect sizes of soil fauna on litter decomposition rates at the global and biome scales, and to assess how climate, litter quality and soil fauna interact to determine such rates. Soil fauna consistently enhanced litter decomposition at both global and biome scales (average increment ~ 27%). However, climate and litter quality differently modulated the effects of soil fauna on decomposition rates between biomes, from climate‐driven biomes to those where climate effects were mediated by changes in litter quality. Our results advocate for the inclusion of biome‐specific soil fauna effects on litter decomposition as a mean to reduce the unexplained variation in large‐scale decomposition models.  相似文献   

18.
TAR DNA‐binding protein 43 (TDP‐43) has emerged as an important contributor to amyotrophic lateral sclerosis and frontotemporal lobar degeneration. To understand the physiological roles of TDP‐43 in the complex translational regulation mechanisms, we exposed cultured cells to oxidative stress induced by sodium arsenite (ARS) for different periods of time, leading to non‐lethal or sublethal injury. Polysome profile analysis revealed that ARS‐induced stress caused the association of TDP‐43 with stalled ribosomes via binding to mRNA, which was not found under the steady‐state condition. When the cells were exposed to short‐term/non‐lethal stress, TDP‐43 associating with ribosomes localized to stress granules (SGs); this association was transient because it was immediately dissolved by the removal of the stress. In contrast, when the cells were exposed to long‐term/sublethal stress, TDP‐43 was excluded from SGs and shifted to the heavy fractions independent of any binding to mRNA. In these severely stressed cells, biochemical alterations of TDP‐43, such as increased insolubility and disulfide bond formation, were irreversible. TDP‐43 was finally phosphorylated via the ARS‐induced c‐jun N‐terminal kinase pathway. In TDP‐43‐silenced cells, stalled mRNA and poly (A)+ RNA stability was disturbed and cytotoxicity increased under sublethal stress. Thus, TDP‐43 associates with stalled ribosomes and contributes to cell survival during cellular stress.  相似文献   

19.
Understanding how environmental variation influences population genetic structure is important for conservation management because it can reveal how human stressors influence population connectivity, genetic diversity and persistence. We used riverscape genetics modelling to assess whether climatic and habitat variables were related to neutral and adaptive patterns of genetic differentiation (population‐specific and pairwise FST) within five metapopulations (79 populations, 4583 individuals) of steelhead trout (Oncorhynchus mykiss) in the Columbia River Basin, USA. Using 151 putatively neutral and 29 candidate adaptive SNP loci, we found that climate‐related variables (winter precipitation, summer maximum temperature, winter highest 5% flow events and summer mean flow) best explained neutral and adaptive patterns of genetic differentiation within metapopulations, suggesting that climatic variation likely influences both demography (neutral variation) and local adaptation (adaptive variation). However, we did not observe consistent relationships between climate variables and FST across all metapopulations, underscoring the need for replication when extrapolating results from one scale to another (e.g. basin‐wide to the metapopulation scale). Sensitivity analysis (leave‐one‐population‐out) revealed consistent relationships between climate variables and FST within three metapopulations; however, these patterns were not consistent in two metapopulations likely due to small sample sizes (= 10). These results provide correlative evidence that climatic variation has shaped the genetic structure of steelhead populations and highlight the need for replication and sensitivity analyses in land and riverscape genetics.  相似文献   

20.
Multi‐decadal to centennial‐scale shifts in effective moisture over the past two millennia are inferred from sedimentary records from six lakes spanning a ~250 km region in northwest Ontario. This is the first regional application of a technique developed to reconstruct drought from drainage lakes (open lakes with surface outlets). This regional network of proxy drought records is based on individual within‐lake calibration models developed using diatom assemblages collected from surface sediments across a water‐depth gradient. Analysis of diatom assemblages from sediment cores collected close to the near‐shore ecological boundary between benthic and planktonic diatom taxa indicated this boundary shifted over time in all lakes. These shifts are largely dependent on climate‐driven influences, and can provide a sensitive record of past drought. Our lake‐sediment records indicate two periods of synchronous signals, suggesting a common large‐scale climate forcing. The first is a period of prolonged aridity during the Medieval Climate Anomaly (MCA, c. 900‐1400 CE). Documentation of aridity across this region expands the known spatial extent of the MCA megadrought into a region that historically has not experienced extreme droughts such as those in central and western north America. The second synchronous period is the recent signal of the past ~100 years, which indicates a change to higher effective moisture that may be related to anthropogenic forcing on climate. This approach has the potential to fill regional gaps, where many previous paleo‐lake depth methods (based on deeper centrally located cores) were relatively insensitive. By filling regional gaps, a better understanding of past spatial patterns in drought can be used to assess the sensitivity and realism of climate model projections of future climate change. This type of data is especially important for validating high spatial resolution, regional climate models.  相似文献   

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