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1.
This report presents an analysis of histone gene expression in the cleaving embryo of the sea urchin, Strongylocentrotus purpuratus, with emphasis on whether the regulatory site(s) in the pathway of gene expression change as development proceeds. The analysis focuses on the equation, dP1dt = M·f·n·At, where dP1dt = the absolute rate of histone synthesis; M = the mole quantity of histone messenger RNA; f = the fraction of histone mRNA in polysomes; n = the polysome size; and At = the rate of elongation of nascent histone polypeptide chains. The embryo solves this rate equation differently at different times. Measurements were made (at 15°C) of absolute rates of histone synthesis (dP1dt). The rate of histone synthesis increases at least 48-fold during the first 6 hr after fertilization from less than 0.5 to 24 pg embryo?1 hr?1; in the period from 6 to 12 hr, this rate rises to 182 pg embryo?1 hr?1, an additional 7.7-fold rise, resulting in an overall increase of 370-fold between the 1-cell and 200-cell stage. The fraction of newly synthesized (zygotic) histone messenger RNA that partitions into polysomes (fzygotic) has also been measured during the first 12 hr of development. This fraction increases from 0.2 in the 2-hr embryo to 0.8 in the 6-hr embryo (16-cell stage), increasing slowly thereafter to near unity by 12 hr. The size of histone-synthesizing polysomes (n) does not change substantially over the 12-hr interval, remaining constant at a weighted mean of 5 ribosomes per polysome (range 3 to 7). Utilizing the data on fzygotic and dP1dt, the rate of elongation of nascent histone polypeptide chains (At) during the first 6 hr of development was estimated; At remains constant at 1.11 codons per second. This calculated value is in fair agreement with a direct measurement of histone peptide elongation rate in the 12-hr embryo. It is proposed that histone gene expression in cleaving sea urchin embryos be divided into two phases, distinguished on the basis of their pivotal translational parameters: Phase I (0–6 hr), during which f is rate determining, and Phase II (6 hr on), during which M is the rate-determining parameter.  相似文献   

2.
Controlled, prospective studies were performed to compare detection of cell culture mycoplasmas by ratio of uptake of tritiated uridine (UdR) to tritiated uracil (U) and by microbiological culture. Culture was by standard agar and broth inoculation with aerobic and anaerobic incubation; immunofluorescent staining of indicator cell cultures was used to detect M. hyorhinis. The ratio of uptake of UdR to U (UdRU) and interpretation of test results were by standard published methods and performed in triplicate. 115 cell cultures were simultaneously assayed by the two techniques. 84 cultures (73.1%) yielded agreement between the 2 methods; 2 cultures (1.7%) yielded conflicting results, and 29 cultures (25.2%) yielded UdRU results in the questionable range. Conflicting results consisted of two negative UdRU tests in mouse cell cultures infected with M. orale. In separate studies, 3T-6 cultures freshly infected with M. orale yielded negative UdRU results 3 days after infection, questionable results after 10 days and a positive UdRU 17 days after infection. UdRU detected infection in fibroblast, epithelial, and lymphocyte cell cultures. Highest UdRU ratios were detected in human skin fibroblasts at early population doubling levels (PDLs), 4064 in one culture at PDL4. UdRU was determined for IMR-90, a human diploid fibroblast at 12 different PDLs using the same lot of media. UdRU gradually decreased throughout the life of the culture, from 2 125 at PDL6 to 340 at PDL36. Cultures in phase III and others exhibiting poor growth frequently yielded questionable or false-positive UdRU results and were not included in tabulations of these results. UdRU determined in endothelial cell cultures decreased as population density increased. In a representative experiment performed over a 4-day period, the UdRU values were 1 808, 955 and 356 when the number of endothelial cells in culture were 5.3 × 105, 6.6 × 105 and 1.1 × 106, respectively.  相似文献   

3.
The ultimate rate of approach to equilibrium in the infinite stepping-stone model is calculated. The analysis is restricted to a single locus in the absence of selection, and every mutant is assumed to be new to the population. Let f(t, x) be the probability that two homologous genes separated by the vector x in generation t are the same allele. It is supposed that f(0, x) = O(x?2?η), η > 0, as x ≡ ¦ x ¦ → ∞. In the absence of mutation, f(t, x) tends to unity at the rate t?12 in one dimension and (ln t)?1 in two dimensions. Thus, the loss of genetic variability in two dimensions is so slow that evolutionary forces not considered in this model would supervene long before a two-dimensional natural population became completely homogeneous. If the mutation rate, u, is not zero f(t, x) asymptotically approaches equilibrium at the rate (1 ? u)2tt?32 in one dimension and (1 ? u)2tt?1(lnt)?2 in two dimensions. Integral formulas are presented for the spatial dependence of the deviation of f(t, x) from its stationary value as t → ∞, and for large separations this dependence is shown to be (const + x) in one dimension and (const + ln x) in two dimensions. All the results are the same for the Malécot model of a continuously distributed population provided the number of individuals per colony is replaced by the population density. The relatively slow algebraic and logarithmic rates of convergence for the infinite habitat contrast sharply with the exponential one for a finite habitat.  相似文献   

4.
The non-autonomous logistic equation
dx(t)dt = r(t)x(t)[1 ? x(t)K(t)]
is studied under conditions that include an environment which is completely deteriorating. In this setting, when the population's growth rate, r, is large on the average, solutions track the environment with a consequent extinction of the population. However, when both r and rK?1 are small in the sense that they are in L1[0,∞) then an asymptotic equivalence, where all solutions tend to positive limits as t approaches infinity, results and the population is persistent, independent of initial density. The asymptotic equivalence produces an unreasonable overshoot of carrying capacity which leads to concern about employing the logistic equation in the above form as a population model when growth rates are close to zero.A re-interpretation of the parameters of the logistic equation leads to the alternative logistic formulation
dx(t)dt = x(t)[r(t) ? cB(t) x(t)], (c > 0)
. A biological interpretation of the parameters is presented and this equation is compared with the classical logistic model in the case where the parameters are constant. If the alternative logistic model is applied in a situation with time-varying parameters, then a deteriorating environment always leads to extinction of the population regardless of the behavior of r. Similarly, a growth rate which is small on the average results in extinction regardless of the behavior of B. Furthermore, r and B have limiting values as t approaches infinity then so does x and the terminal value of x is equal to the terminal value of the carrying capacity of the population. In general, the alternative formulation seems to be the more reasonable model in situations where perturbations lead to severe decreases in environmental quality and growth rates.  相似文献   

5.
NMR experiments were conducted to map distances among various loci on Escherichia coli carbamoyl-phosphate synthetase. Three paramagnetic probes, viz., Mn2+, Cr3+-ATP, and nitroxide spin-labels were used in experiments designed to measure the 1T1 (longitudinal relaxation rate) of various nuclei in enzyme complexes with these paramagnetic species. The distance between the monovalent cation activator site and enzyme-bound Cr3+-ATP was determined using three different monovalent cations, 133Cs+, 15NH4+, and Li+ (6Li and 7Li). Substantial paramagnetic effects were observed on the 1T1 values for all four nuclei and the M+ to Cr3+ distance was ~4 Å. Additional NMR data with 133Cs+ and Mn2+ were used to obtain the distance between the two cation activator sites, monovalent and divalent, and a Mn2+ to Cs+ distance of 8.0 Å was calculated, corroborating earlier work [F. M. Raushel, P. M. Anderson, and J. J. Villafranca (1983)Biochemistry22, 1872–1876]. Three separate sulfhydryl sites on carbamoyl-phosphate synthetase were spin-labeled with 3-maleimido-2,2,5,5-tetramethylpyrrolidinyl-1-oxy. Each of these enzyme-nitroxide complexes was used to examine the paramagnetic influence on the 1H of l-glutamate and l-ornithine and also the 1H and 31P of IMP and UMP. Small paramagnetic effects were observed on these nuclei and only lower limits on the distance from each nitroxide could be obtained. Thus both l-ornithine and l-glutamate are >11 Å from each sulfhydryl site while IMP and UMP are >15 Å from these sites. A topographical map is presented based on these data and data from our previous NMR studies that show the spatial relationship among the active-site components of carbamoyl-phosphate synthetase.  相似文献   

6.
The chemical reaction between (±)-styrene oxide and N-acetylcysteine produces both positional isomers (1 and 2) as a mixture of diastereoisomers with a preference for the benzylic thioether isomer 1 (2 : 1). Synthesis of the mercapturic acid conjugates from either (+)- or (?)-styrene oxide produces only two of the four possible stereoisomers. The single diastereoisomers of 1 and 2 were separated by high pressure liquid chromatography (HPLC) and identified by 1H- and 13C-nuclear magnetic resonance (NMR). The relative stereochemistry at the benzylic carbon center of the mercapturic acid conjugates was assigned on the basis of the established chemical correlation between optically pure styrene oxide and its precursor mandelic acid, and considerations on the mechanism of ring opening of epoxides by sulfur nucleophiles. The stereochemical definition of the isomers 36 should prove useful in investigations of the biotransformation of the glutathione (GSH) conjugates of styrene oxide.  相似文献   

7.
A derivative of Escherichia coli K-12 (strain 343113) has been developed in which mutations in several genes can be detected simultaneously by plating parts of the bacterial population on different selective media. The mutation types include reversions from differently induced auxotrophies (nad-, arg-) aand (forward) mutations leading to resistance against 5-methytryptophan and to gal+ phenotype. It is assumed that many types of DNA alteration, including deletions and changes involving gross DNA regions, will lead to viable detectable mutants.The usefulness of strain E. coli343113 was tested in spot tests, in liquid tests, in tests with extracts of mammalian organs, and in mammalian-mediated tests. It is concluded that strain 343113 is at least as useful in routine mutagenicity testing (especially in mammalian-mediated assays) as other present bacterial strains.  相似文献   

8.
The enthalpy change for the oxidative deamination of glutamate by NADP+ catalyzed by bovine liver glutamate dehydrogenase has been determined calorimetrically. The ΔHo values are 64.6 ± 1.2 kJmol and 70.3 ± 1.2 kJmol at 25 and 35°C respectively. The equilibrium constants for the reaction at the two temperatures were determined spectrophotometrically. This enabled the determination of ΔGo and ΔSo of the reaction as well. ΔHovalues were also determined for the reaction using an alternative coenzyme and the deuterated substrate.  相似文献   

9.
A set of virulent mutants of bacteriophage lambda have been selected from λv2 v3. The sites of mutation form two microclusters, both close to v3. Some of the mutants, selected for their ability to grow on a λ-lysogen, can also grow on a λdv carrier strain. They are called “supervirulent” and a mutation conferring super-virulence is called vs. The sites of mutation to vs lie between the presumed promoter mutants (x3, x7) and x13, implying that the operator and promoter interpenetrate each other. The relative affinities of λ repressor for binding, in vitro, to λv+, λv3, λvs326, and λv3 vs327 DNA were 1, 14, 120, and 14000, respectively. We suggest that two separate mutations in the right operator are needed to confer virulence because promoter sites lie within the operator.  相似文献   

10.
Diploid embryos which are homozygous for the t12 mutation die at the morula stage. In the current studies, ova from heterozygous (+t12) females were fertilized in vitro with spermatozoa from +t12 males. The fertilized ova were immediately placed into media containing cytochalasin B to prevent second polar body formation, producing +/+/+, +/+/t12, +/t12/t12, and t12/t12/t12 embryos. The subsequent development of these triploid embryos was compared with that of diploid +/+, +t12, and t12t12 embryos developing from ova which were also fertilized in vitro with spermatozoa from +t12 males but which were not treated with cytochalasin B immediately following gamete coincubation. The data show that those triploid embryos which possess a wild-type allele and two mutant alleles are phenotypically wild type while those possessing three mutant alleles are not phenotypically distinguishable from their diploid (t12t12) counterparts. Like t12t12 embryos, t12/t12/t12 embryos die at the morula stage, prior to blastocoelic cavity formation.  相似文献   

11.
The erythro-2,3-dihydroxyoctadecanoic acid studied is a synthetic homologue of a natural occurring constituent of sphingolipids. The potassium salt of the acid crystallizes in the monoclinic space group P2, with the unit cell dimension: a = 5.39, b = 7.06, c = 26.26 A? and β = 94.9°. The crystal structure was solved by direct methods and was refined to R = 0.062. The absolute configuration of the compound was determined by means of anomalous scattering effects, showing that the natural fatty acid has d-erythro configuration. The compound packs tail to tail in an unusual bilayer arrangement. The hydrocarbon chains have an extreme tilt of 60° and opposite inclination in the two halves of the bilayer. Laterally the hydrocarbon chains are arranged according to the monoclinic M∥ packing mode. The carbon chain makes a perpendicular bent at carbon atom 2. This places the 2-hydroxyl group in a preferred co-planar conformation towards the carboxylate group and at hydrogen bond distance to one of the carboxylate oxygens. The carboxylate group and the two hydroxyl groups are co-ordinated to K+ ions and together account for a large molecular cross-ection of 38 Å2. Monolayer studies show that the acid forms a phase with this spacious molecular area also in contact with water. On compression above 10 mN m?1 transition to a more condensed state (S = 27 A?2) takes place accompanied by marked changes of the surface potential.  相似文献   

12.
13.
The courses of infection in inbred mouse strains were compared following infection with three Stabilates of high, intermediate, and low virulence of Trypanosoma vivax stock Zaria Y486. Mouse strains could only be shown to differ in their resistance to T. vivax infections as judged by the height of the initial parasitemia and survival times when a trypanosome population of low or intermediate virulence was used. A T. vivax population of high virulence was uniformly lethal. Comparison of lytic antibody titers between groups of resistant (C57B16) and susceptible (Balbc) mice did not show any significant differences in titers of the surviving mice but the mice in either group which did not control the initial parasitemia had lower lytic antibody titers than those which did. A significantly larger number of Balbc mice failed to control the initial infection as compared to the C57B16. Treatment with cyclophosphamide did not ablate differences in susceptibility between the two strains. The use of congenic mice showed that these differences in susceptibility were not related to differences in the major histocompatibility complex between these strains.  相似文献   

14.
A mathematical model of the 51Cr-release microcytotoxicity assay is utilized to find conditions under which the kinetics of this assay resemble the kinetics of a classical enzyme-substrate reaction. Assuming a steady-state approximation, that “bystander” effector cells do not bind markedly better than the cytotoxic effector cells, and that the programming of the target cells for lysis is irreversible, it is shown that the velocity of label release is v = vmaxTT/(K12+TT), where both Vmax and K12 are linear functions of the effector-cell population and TT is the initial target-cell population. Moreover, the expressions for K12 and Vmax are expressed in terms of natural kinetic parameters of the process and attributes of the noncytotoxic bystanders.  相似文献   

15.
The effects of different neutral salts on the maximal velocity (V) and activation volume (ΔV3) of the M4-lactate dehydrogenase reaction were studied to determine the mechanistic basis of the inhibitory effects of these salts. For salting-in salts (which increase protein group solubility), increasing salt concentrations led to reductions in V and increases in ΔV3, with the order of salt effectiveness following the Hofmeister (lyotropic) series: KSCN > KI > KBr. A 50% reduction in V was associated with an approximately 17 cm3 mol?1 increase in ΔV3 for different concentrations of the same salt and for equal concentrations of different salting-in salts. Salting-out salts were also inhibitory, but no uniform correlation between changes in V and ΔV3 was observed. The strongly salting-out salt KF decreased ΔV3 at all concentrations. The weaker salting-out salt K2SO4 increased ΔV3 at concentrations below 0.1 m and decreased ΔV3 at higher concentrations. KCl increased ΔV3 as the salt concentration was raised to approximately 0.2 m; further increases in KCl concentration were without effect on ΔV3. The rate and volume effects of these neutral salts, especially the highly regular covariation in V and ΔV3 found for salting-in salts, seem difficult to explain in terms of salt-induced changes in the geometry of the active site. We propose instead that these salt effects can all be explained in terms of the energy and volume changes which accompany transfers of protein groups (amino acid side chains and peptide backbone linkages) between the hydrophobic interior of the enzyme and the enzyme-water interface during catalytic conformational changes.  相似文献   

16.
Plant populations growing at high densities undergo density-dependent mortality or self-thinning. The density of survivors ({ρ}) is related to their mean biomass (w) by the power equation w = Kρ?a, where a is 32. This is known as the “self-thinning rule”. This relationship is very general for plant populations and represents both an asymptotic time-trajectory for a particular population and a boundary line for juxtaposed joint values of w and p of separate populations. The traditional allometric derivation of the rule is outlined and shown to be unrealistic. An attempt to reformulate the self-thinning rule, based on the traditional allometric derivation, is shown to be unsatisfactory and an alternative allometric derivation is presented. The rule in its traditional statement w = Kρ?32 is still its best expression. The nature of the constant K is discussed with particular reference to its dimensionality.  相似文献   

17.
To determine the consequences of contact pressure in phyllotaxis, a mathematical model is constructed in which a leaf distribution is represented by a point lattice of n + 1 lattice points at equal intervals on a helix wound around a cylinder. The model is normalized by taking the girth of the cylinder as 1 and by measuring time T in plastochrones, so that n = [T]. r stands for the normalized internode distance (component of the distance between two consecutive lattice points that is parallel to the axis of the cylinder). d stands for the divergence (fraction of a turn between consecutive lattice points). It is assumed that r is a monotonic decreasing function of T such that r(T) → 0 as T → ∞. Contact pressure is represented by the assumption that the minimum geodesic distance between lattice points is maximized. It is shown that if (p, q), with p < q, is the contact phyllotaxis determined when contact pressure first becomes effective, then the continuation of contact pressure requires that the advance to higher phyllotaxis as r decreases must proceed via successive pairs of consecutive terms of the Fibonacci sequence generated by the numbers p and q, namely, p, q, p + q, p + 2q, 2p + 3q, …. The divergence, starting from some value d = 1t + 1a2 + … + 1(an + x) determined by p and q converges to an ideal angle 1t + 1a2 + … + 1an + 1τ, where τ is the golden section. A necessary and sufficient condition for the ideal angle to be 12 + 1τ = τ?2 is that the p and q of the initial contact phyllotaxis be consecutive Fibonacci numbers of the sequence 1, 2, 3, 5, 8, …. It is proved that a sufficient condition for convergence to the ideal angle τ?2 of normal phyllotaxis is that contact pressure begin before T = 5 or before r < 33812 with d initially between 13 and 12.  相似文献   

18.
Upon partial reduction of hydrogenase from Chromatium vinosum with ascorbate plus phenazine methosulphate, EPR signals due to Ni(III) and a [3Fe-xS] cluster appear simultaneously and with equal intensities. Since the intact enzyme shows no S = 12 signals, it is concluded that Ni(III) and a [4Fe-4S]3+ cluster interact magnetically in such a way as to prevent the detection of the two paramagnets as individual S = 12 systems. This interaction is thought to be the origin of a signal in which Fe is involved and which is not due to an S = 12 system (Albracht, S.P.J., Albrecht-Ellmer, K.J., Schmedding, D.J.M. and Slater, E.C. (1982) Biochim. Biophys. Acta 681, 330–334). A variable fraction of the enzyme preparation shows signals due to Ni(III) and a [3Fe-xS] cluster with equal intensities without any further treatment. These are thought to be derived from irreversibly inactivated enzyme molecules. The enzyme contains no selenium.  相似文献   

19.
A new assay system of phospholipid exchange activities is described. The exchange activities were quantitated by measuring the stimulation of phospholipid transfer between two separate populations of liposomes, which contained, as the major constituents, phosphatidylcholine, phosphatidylethanolamine, phosphatidylinositol, sphingomyelin, and cholesterol in molar ratios of 6: 2: 1: 1: 5. One population of the liposomes was made reactive to concanavalin A by the incorporation of 1.8 mol% α-d-mannosyl-(1 → 3)-α-d- mannosyl-sn-1,2-diglyceride from Micrococcus lysodeikticus. The concanavalin A-reactive liposomes, a phospholipid donor, were doubly labelled with [6-3H]galactosylglucosyl ceramide and that class of 32P-labelled phospholipids whose exchange was being measured. The 3H-labelled glycolipid served as a non-exchangeable reference marker. The other population of the liposomes, a phospholipid acceptor, was concanavalin A nonreactive. These two populations of liposomes were incubated with the cytosol protein of rat liver in a total volume of 0.2 ml.After the incubation, two different procedures were used to separate the two liposomal populations. In one procedure concanavalin A was added to agglutinate the reactive liposomes; the flocculated lectin-liposome complex was separated from the non-reactive liposomes by brief centrifugation. In the other procedure the reactive liposomes were trapped by binding to concanavalin A covalently coupled to Sepharose 2B; the complex was separated from the nonreactive liposomes by filtration through a filter paper under suction. In both assay procedures the amount of phospholipid transferred from the donor to the acceptor liposomes was calculated from the decrease of 32P/3H ratio of the concanavalin A-reactive liposomes during the incubation. By the assay system it is possible to determine phosphatidylcholine and phosphatidylinositol exchange activities in 100 μg of rat liver cytosol protein.  相似文献   

20.
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