Comparative genome mapping among Populus adenopoda, P. alba, P. deltoides, P. euramericana and P. trichocarpa

Among the genus Populus, the sections Populus (white poplar), Aigeiros Duby (black poplar) and Tacamahaca Spach contain many tree species of economical and ecological important properties. Two parental maps for the inter-specific hybrid population of Populus adenopoda × P. alba (two species of Populus section) were constructed based on SSR and SRAP markers by means of a two-way pseudo-test cross mapping strategy. The same set of SSR markers developed from the P. trichocarpa (belonging to Tacamahaca section) genome which were used to construct the maps of P. deltoides and P. euramericana (two species of Aigeiros section) was chosen to analyze the genotype of the experimental population of P. adenopoda × P. alba. Using the mapped SSR markers as allelic bridges, the alignment of the white and black poplar maps to each other and to the P. trichocarpa physical map was conducted. The alignment showed high degree of marker synteny and colinearity and the closer relationship between Aigeiros and Tacamahaca sections than that of Populus and Tacamahaca. Moreover, there was evidence for the chromosomal duplication and inter-chromosomal reorganization involving some poplar linkage groups, suggesting a complicated course of fission or fusion in one of the lineages. A poplar consensus map based on the comparisons could be constructed will be useful in practical applications including marker assisted selection.     

Phylogeny of Populus (Salicaceae) based on nucleotide sequences of chloroplast TRNT-TRNF region and nuclear rDNA

The species of the genus Populus, collectively known as poplars, are widely distributed over the northern hemisphere and well known for their ecological, economical, and evolutionary importance. The extensive interspecific hybridization and high morphological diversity in this group pose difficulties in identifying taxonomic units for comparative evolutionary studies and systematics. To understand the evolutionary relationships among poplars and to provide a framework for biosystematic classification, we reconstructed a phylogeny of the genus Populus based on nucleotide sequences of three noncoding regions of the chloroplast DNA (intron of trnL and intergenic regions of trnT-trnL and trnL-trnF) and ITS1 and ITS2 of the nuclear rDNA. The resulting phylogenetic trees showed polyphyletic relationships among species in the sections Tacamahaca and Aigeiros. Based on chloroplast DNA sequence data, P. nigra had a close affinity to species of section Populus, whereas nuclear DNA sequence data suggested a close relationship between P. nigra and species of the section Aigeiros, suggesting a possible hybrid origin for P. nigra. Similarly, the chloroplast DNA sequences of P. tristis and P. szechuanica were similar to that of the species of section Aigeiros, while the nuclear sequences revealed a close affinity to species of the section Tacamahaca, suggesting a hybrid origin for these two Asiatic balsam poplars. The incongruence between phylogenetic trees based on nuclear- and chloroplast-DNA sequence data suggests a reticulate evolution in the genus Populus.     

Flavonoidmuster im knospenexkret der betulaceen

In the Betulaceae, buds of the genus Alnus, Betula (Betuleae) and Ostrya (Coryleae) excrete a lipophilic “coat” consisting of terpenoids and flavonoid aglycones. The variation of the substitution pattern of these latter compounds has been investigated in relation to taxonomy. Characteristic compounds which occur are the methyl ethers of 6-hydroxykaempferol, ermanin (kaempferol-3,4′-Me), acacetin and pectolinarigenin. Other methyl derivatives of kaempferol, quercetin, apigenin and naringenin also occur more or less frequently. Evidence is given for the species-specifity of the flavonoid pattern in many of these exudates.     

Flavonoid data and populational observations in support of hybrid status for Populus acuminata

Flavonoid distribution and populational composition at the collection sites of several samples of Populus acuminata strongly suggest that this taxon is an inter-sectional hybrid between P. angustifolia, sect. Tacamahaca and any one of two or three different species of the section Aigeiros, when the entire range is considered. In the vicinity of the type locality, the Aigeiros parent is P. sargentii. Within any population, foliage of trees of P. acuminata is characterized by morphological intermediacy and an essentially additive flavonoid profile, as compared to the two parental taxa present. In habit the trees resemble those of P. sargentii, and habitats at the collection sites were found to be somewhat intermediate. Fifteen flavonoid compounds were consistently present in samples of the putative hybrid. Twelve of these had diagnostic value because they were absent in one of the parental species. One compound, apigenin 7-O-diglucoside, was found only in P. acuminata. In part, our identifications correspond to compounds reported by Crawford in a morphological and chemical study of P. acuminiata.     

杨亚科植物的分类与分布

杨亚科（Populoideae）植物自然分布于热带非洲和大约从北纬19°～70°度的北半球,由胡杨属（Balsamiflua）和杨属（Populus）2个属所组成。胡杨属间断分布于赤道非洲、古地中海地区和墨西哥,包含2个组（胡杨组、墨杨组）和约3个天然种。杨属分布于欧洲、亚洲、非洲（北缘）和北美洲的广大地区,包含大叶杨亚属（Subgen．Leucoides）（大叶杨组）、杨亚属（Subgen．Populus）（青杨组、黑杨组、杨组）2个亚属和约52个天然种。拟定了杨亚科属的检索表、胡杨属组和种的检索表、杨属亚属和组的检索表以及杨属中各组种的检索表。提供了一个杨树种类目录,包括它们的正名、异名、文献引注和地理分布等。     

Flavonoids of Balsamorhiza deltoidea and Wyethia mollis

Eleven O-methylated derivatives of kaempferol, quercetin and quercetagetin were isolated from the dichloromethane leaf-wash of Balsamorhiza deltoidea. Four of these compounds represent new reports from either Balsamorhiza or Wyethia: 6-hydroxykaempferol 7-O-methyl ether, quercetin 3′,4′-O-dimethylether, quercetagetin 7-O-methyl ether, and quercetagetin 3,6,7-O-trimethyl ether. We also confirmed the presence of two isoflavones, santal and orobol 3′-O-methyl ether, in W. mollis. The 8-C-prenylated derivatives of naringenin, eriodictyol, and dihydroisorhamnetin were also identified as constituents of W. mollis. The vacuolar flavonoid fraction of Balsamorhiza deltoidea and Wyethia helenioides was shown to consist of simple mono and diglycosides of kaempferol and quercetin.     

Biflavones of Dacrydium sensu lato

A survey of the biflavonyls in the leaves and branchlets of all three sections of the genus Dacrydium s.l. revealed a complex mixture of amentoflavone and its partial methyl ethers and hinokiflavone in most species. A group of three species in section C, however, were characterised by cupressuflavone derivatives as the major biflavone constituents. The results are used to discuss proposals for revised generic boundaries.     

New flavans isolated from the leaves and stems of Cratylia mollis (Leguminosae)

Cratylia mollis Mart ex. Benth is a species belonging to the Leguminosae family that exists throughout South America, and it is one of the most abundant plants in northeastern Brazil, especially in the semiarid region. This plant is popularly known as “camaratu” and “camaratuba”, and the leaves and stems of this species are used as a substitute for cattle's alimentation during the dry season. The chemical investigation of the methanolic extract from leaves and stems of C. mollis led to the isolation of new flavans named 4,2′,3′-trihydroxy-4′-methoxy-6,7-(methylenedioxy) isoflavan, 7,2′-dihydroxy-6-methoxyflavan, 7,3′-dihydroxy-6,2′-dimethoxyflavan, 7-hydroxy-6-methoxyflavan, 2′-hydroxy-6,7-(methylenedioxy) flavan, 2R*,3S*-7,2′-dihydroxy-6-methoxy-flavan-3-ol, and 2R*,3S*-7,3-dihydroxy-6,2′-dimethoxyflavan-3-ol and an unusual flavan (11H-benzofuro[3,2-b][1] benzopyran-2-methoxy,3-hydroxy,5a,10a-dihydro) named (3R*,2R*)-3-O-2′-7-hydroxy-6-methoxyflavan. The structures of the new compounds were determined using spectroscopic methods.     

Morphological and genetic characteristics of genetic tumor in Nicotiana glauca

It is well understood that genetic tumors develop in certain interspecific Nicotiana hybrids. Nicotiana species are divided into “plus” and “minus” groups and crosses between “plus” and “minus” species give rise to tumorous hybrids. However, it has been proposed that parents and hybrids derived from crosses among members within the same group do not produce tumors. In this study, genetic tumors were only obtained in Nicotiana glauca, which exhibited tumor features similar to those of N. glauca × N. langsdorffii. Our results suggest that genetic factors may control tumor formation independent of tumor induction dependent on the specific interspecific cross. Genetic tumor formation exhibited high B-type and D-type cyclin expression levels, indicating tumor cells are characterized by an uncontrolled cell cycle.     

Phenolic constituents of Semecarpus anacardium

GLC-MS analysis of methylated bhilawanol from S. anacardium nuts and its oxidation product, the methyl ester of an aromatic carboxylic acid, conclusively proved that it contains more than seven closely related compounds. Two of them are major components which were isolated and shown to be 1-pentadec-Δ^5′-enyl-2,3-dimethoxybenzene (I) and 1-pent biflavanoids A, B and C have been also isolated from defatted nuts of S. anacardium. The first of these has been characterized as its methyl ethers. A₁ and A₂, for which biflavanone structures (VI) and (VII) are suggested on the basis of chemical and spectral evidence. The biflavanones B and C have been also characterized as their methyl ethers. Suggested structures are O-methyl derivatives of a IB-3′, IIA-8-binaringenin (XIV) for the former and IB-3′, IIA-8-biliquiritigenin (XV) for the latter.     

EXPERIMENTAL HYBRIDIZATION OF XANTHIUM STRUMARIUM (COMPOSITAE) FROM ASIA AND AMERICA. II. SESQUITERPENE LACTONES OF F1 HYBRIDS

Effects of hybridization on sesquiterpene lactones in Xanthium strumarium were studied for clues to the relationship of Old and New World populations. In crosses between indigenous Asiatic plants in the “strumarium” morphological complex and various American complexes that produce xanthinin as a major sesquiterpene lactone, the F₁ hybrids contained xanthinin and the related compounds, xanthanol, xanthatin, and xanthinosin. In other crosses with various American complexes that produce xanthumin, the stereoisomer of xanthinin, the F₁ hybrids contained xanthinin and xanthumin as well as xanthinin-related compounds and their stereoisomers, xanthumanol, deacetoxylxanthumin, and tomentosin. The Asiatic plants of “strumarium” from Hong Kong involved in the crosses produce approximately equal percentages of xanthinin, xanthatin and xanthinosin, but those from India contain only xanthinosin. The putative introduction of the American morphological complex, “chinense,” contains xanthumin as the major component but shows chemical diversity that indicates genes derived from the indigenous “strumarium” complex.     

Molecular evolution of 35S rDNA and taxonomic status of Lycopersicon within Solanum sect. Petota

To clarify the taxonomic status of tomatoes (“Lycopersicon”) and their relationship to the members of sect. Petota of genus Solanum L., organization of the rDNA external transcribed spacer (5′ ETS) was studied in 33 Solanum and “Lycopersicon” species. Phylogenetic reconstruction revealed that three major groups can be distinguished. Non-tuber-bearing species of ser. Etuberosa as well as tuber-bearing Central American diploids appeared as a paraphyletic group. The first of two well-defined clades embraced all tuber-bearing South American species and Central American polyploids. The other clade (named “tomato clade”) contains non-tuber-bearing species of ser. Juglandifolia and tomato species of ser. Neolycopersicon, which appears to be imbedded in sect. Petota. The new 5′ ETS variant D characterized by a cluster of downstream subrepeats is characteristic for the tomato clade. The variant D originated directly from the most ancestral variant A found in ser. Etuberosa and the Central American diploids, whereas variants B and C specific for the tuber-bearing South American species and Central American polyploids represent a parallel lineage of molecular evolution. The sequence analysis demonstrates the existence of an evolutionary trend of parallel multiplication of specific motifs in 5′ ETS in different groups of sect. Petota.     

An Agrobacterium tumefaciens transformation protocol effective on a variety of cottonwood hybrids (genus Populus)

 We describe a protocol for Agrobacterium tumefaciens-mediated transformation of hybrid cottonwoods (Populus sections Tacamahaca Spach. and Aigeiros Duby). The protocol has allowed routine transformation of several economically important cottonwood hybrids (Populus trichocarpa Torr. & Gray×P. deltoides Bartr. ex. Marsh. and P. deltoides×P. nigra L.) that were previously difficult to transform. The procedure was applied to 11 different hybrid cottonwood genotypes and one P. deltoides genotype using kanamycin as the selection agent. Additional experiments showed a very strong interaction between auxin preculture and the effectiveness of various cytokinins for induction of shoot organogenesis. The data also demonstrated the superiority of Agrobacterium strain EHA105 over C58 and LBA4404 for T-DNA transfer based on transient assays with a reporter gene. Received: 16 June 1998 / Revision received: 5 February 1999 / Accepted: 14 April 1999     

Transformation of 3-(3-carboxyphenyl)alanine in iris species An example of diversity in catabolism of secondary plant products

3-(3-Carboxyphenyl)-DL-[2-¹⁴C]alanine has been incorporated into four species of iris. In all species extensive metabolization takes place. In Iris × hollandica, in which both the alanine derivative and 3′-carboxyphenylglycine occur, the products identified are the glycine derivative, 3′-carboxyphenylacetate acid, 3′-carboxymandelic acid, and 3′-carboxyphenylglyoxylic acid. In I. sanguinea, in which the alanine and glycine derivatives also occur, the products identified are the glycine and acetic acid derivatives but the major product is 3-(3-hydroxymethylphenyl)alanine, a naturally occurring amino acid in this species. In I. tectorum, in which only the carboxy-substituted alanine derivative occurs, the products identified are the acetic acid and glyoxylic acid derivatives. In I. pallida, not containing any of the meta-substituted amino acids, the products identified are again the acetic acid and glyoxylic acid derivatives. The results have been further substantiated by incorporation of labelled 3′-carboxyphenylacetic acid and 3′-carboxymandelic acid into I. × hollandica and I. sanguinea.The results demonstrate three different metabolic patterns for the alanine derivative and confirm previous results on the pathway from the alanine to the glycine derivative. Furthermore, the results may be of significance for the elucidation of the catabolism of phenylalanine.     

Parasites in micromammal fecal pellets throughout the Late Holocene (“Cueva Peligro” paleontological site,Patagonia, Argentina)

Parasite remains in micromammal fecal pellets collected from the paleontological site “Cueva Peligro” (CP 43°40′18”S, 66°24′52”W), Chubut Province, Argentina, were examined. The samples were obtained from two grids, dated between 1220 ± 70¹⁴C yr B.P. to modern dates. Fecal pellets were whole processed, rehydrated, homogenized, and examined via light microscopy. Eggs of parasites found were measured and photographed. Fecal pellets belong to one or more insectivore to omnivore unidentified micromammal species, possibly sigmodontine rodents. A high number of helminthes species was recorded (11 species), eight nematodes, two anoplocephalid cestodes and one acanthocephalan species. The sigmodontine-parasite relationship varied throughout the studied period and between studied grids. This is the first time that Gongylonema sp. and Syphacia sp. are reported from ancient times from Patagonia. The obtained results contribute to the knowledge of parasite assemblages associated to native South American sigmodontine rodents and the zoonoses present in the area throughout the lasts 1200 years.     

Species-specific kaempferol derivatives in ferns of the appalachian Asplenium complex

A series of kaempferol derivatives have been identified in fronds of three parental species of the Appalachian Asplenium complex. Asplenium platyneuron is characterised by the presence of the 7-glucoside of kaempferol 3,4′-dimethyl ether and also contains kaempferol 3,7-diglucoside, free and with an aliphatic acyl attachment. By contrast, A. rhizophyllum contains a remarkable caffeoyl complex of kaempferol glycosides, which appears to be chromatographically homogenous. However, on deacylation, the complex yields caffeic acid and the 7-glucoside, 3,7-diglucoside, 3-sophoroside-7-glucoside and 7,4′-diglucoside of kaempferol. Asplenium montanum, in addition to having previously characterised glycosylxanthones, has two further kaempferol derivatives. It has been confirmed that these various species specific flavonoids are inherited in an additive fashion in three interspecific hybrids.     

An efficient method for the sequential production of lipid and carotenoids from the Chlorella Growth Factor-extracted biomass of <Emphasis Type="Italic">Chlorella vulgaris</Emphasis>

Efficient methodology for simultaneous extraction of multiple bioactive compounds from microalgae still remains a major challenge. The present study provides a method for the sequential production of three major products: Chlorella Growth Factor (CGF, a nucleotide-peptide complex enriched with vitamins, minerals, and carbohydrates), lipid, and carotenoids from Chlorella vulgaris biomass in an economically feasible manner. After protein-rich CGF was extracted, the spent biomass was found to contain 12% lipid and 3% carotenoids when extracted individually, compared to that of the un-utilized (fresh) biomass (lipid, 14%; carotenoids, 4%). When extracted simultaneously using conventional methods, the yield of lipid from “CGF and carotenoids-extracted biomass,” and carotenoids from “CGF and lipid-extracted biomass” were significantly reduced (50%). However, simultaneous extraction using different solvent mixtures such as hexane:methanol:water and pentane:methanol:water mixture-augmented lipid yield by 38.5% and carotenoids by 14%, and additionally retained chlorophyll and its derivatives. Column chromatographic approach yielded sequential production of lipid (18%), lutein (9%) with better yields as well as without chlorophyll interference. Different geometric isomers of lutein all-E-(trans)-(3R,3′R,6′R)-β,ε-carotene-3,3′diol, 9Z(cis)-(3R,3′R,6′R)-β,ε-carotene-3,3′diol, and 13Z(cis)-(3R,3′R,6′R)-β,ε-carotene-3,3′diol were purified by HPLC and elucidated by CD, UV, NMR, FT-IR, and Mass spectra. In conclusion, the study provides an efficient and economically viable methodology for sequential production of lipid and lutein along with its geometrical isomers without chlorophyll influence and yield loss from the protein-rich CGF-extracted spent biomass of marine microalga, Chlorella vulgaris.     

Phylogeny of New World Salvia subgenus Calosphace (Lamiaceae) based on cpDNA (psbA-trnH) and nrDNA (ITS) sequence data

Salvia subgenus Calosphace (Lamiaceae) is economically and ethnomedicinally significant and comprised of more than 500 species. Although strongly supported as monophyletic, it has received no comprehensive systematic research since the initial establishment of 91 taxonomic sections in 1939. Representative taxa of 73 sections of Calosphace were sampled to investigate the phylogenetic relationships and identify major lineages using chloroplast (intergenic spacer psbA-trnH) and nuclear ribosomal DNA (internal transcribed spacer). Phylogenetic analysis of the combined data sets established monophyly of seven sections (Blakea, Corrugatae, Erythrostachys, Hastatae, Incarnatae, Microsphace, and Sigmoideae) and four major lineages (S. axillaris, “Hastatae clade”, “Uliginosae clade”, and “core Calosphace”). Sections spanning two or more centers of diversity are not supported by our results; rather, supported relationships exhibit significant geographic structure. Mexico is supported as the geographic origin of Calosphace, and no more than seven dispersal events to South America are required to account for current disjunct distributions.