Habitat alteration and its effects on native fishes in the upper Tennessee River system, east-central U.S.A.

The upper Tennessee River drainage, which includes portions of the States of Virginia, North Carolina, and Tennessee, supports an exceptionally diverse fish fauna. Recent reductions in abundance and geographic ranges of several freshwater fishes have promulgated the imposition of protective measures for about 115 species among the three states, with nearly half of those species occurring in the upper Tennessee River. Most protected species are darters (Percidae: Etheostomatinae) or minnows (Cyprinidae), and are typically small, benthic invertivores. Major impacts on the fish fauna have resulted from dams, introduced species, toxic spills, mining and agriculture. An important cumulative effect of these impacts is fragmentation of the watershed; nearly 40% of the riverine habitat in major tributaries is either impounded or altered by tailwater discharges. The isolation and stress imposed on tributaries of the river have caused and will continue to cause extirpations of fishes, mussels and other aquatic fauna. Numerous federal, state, and private organizations are co-operating in efforts to protect rare species and habitats, improve agricultural and coal-producing practices, and enforce regulations for industrial and municipal effluents.     

Effects of plumbous ion on guanine metabolism.

The enzyme guanine aminohydrolase (guanase) is inhibited by low levels of Pb2+. The inhibition is noncompetitive and the Ki is 3.0 X 10(-6) M. The only other heavy metals that are inhibitory at low concentrations are Ag+, which is 36% more, and Hg2+, which is about 50% less inhibitory than Pb2+. The inhibition of guanase by Pb2+ and Hg2+ is synergistic and the inhibition of the enzyme was readily reversed by EDTA. The relationship of these studies with guanase and to the etiology and treatment of saturnine gout, which appears in humans suffering from lead poisoning, is discussed.     

Dendrochronological dating of Rebel’s Rest (40FR512), Franklin County,Tennessee, USA

The structure named Rebel’s Rest was a two-story, Reconstruction-era house located on the campus of the University of the South in Sewanee, Tennessee, before being severely damaged by fire in July 2014. The house was constructed of squared timbers and round logs, with later additions built using sawn lumber. Dendrochronological analyses of timbers and logs salvaged from the house reveals wood from four genera: oak (Quercus spp.), tulip poplar (Liriodendron tulipifera L.), American chestnut (Castanea dentata [Marshall] Borkh.), and pine (Pinus spp.). We statistically and graphically crossdated a total of 251 samples (24,410 rings) with regional chronologies from the ITRDB, resulting in three dated chronologies comprised of oak (1645–1874), tulip poplar (1725–1865), and American chestnut (1710–1864). The majority of samples with cutting dates (95.6%) ended in years 1865–1866, confirming the historically reported construction date of 1866 for the initial structure. The cutting date analysis also confirms two rooms as later additions, Room M (1867) and Room B (1875). Based on ring count and the number of chronologies produced, this research represents the largest known dataset from a single historic structure in the Southeastern US.     

Differential visibility of treponemal disease in pre‐Columbian stratified societies: Does rank matter?

Treponemal disease is known to be associated with the compromised community health of permanent village settlement. This association explains its high visibility in the village‐based, arguably chiefdom level, agriculturalist societies of late prehistoric (AD 1300–1600) North America. Within chiefdom‐level societies, health differences have often been demonstrated between mortuary‐defined “elite” and “nonelite” individuals. This theoretically should predict status‐based differences in treponemal disease visibility. The prediction is tested in a five‐site osteological sample (N = 650) from the Dallas phase (AD 1300–1550), a simple mortuary‐defined two‐tiered presumptive chiefdom level maize agriculturalist socioeconomic context from lower east Tennessee. The Dallas phase results affirm a general pre‐Colombian North American pattern of no sex differences and display comparable adult to subadult frequencies. The study also reveals that given a sufficient sample size, “elites” do indeed exhibit a significantly lower frequency of tertiary stage treponemal disease. This can be attributed to better baseline health, which has been previously demonstrated in this sample. It may also be affected by the mortuary inclusion of achieved status individuals whose good health may have facilitated sociopolitical advancement. Another pattern that emerged is an apparent young adult age bias in disease visibility. This suggests that tertiary treponemal disease morbidity may either directly or synergistically factor in early adult age at death. Future research will address the veracity of this association. Am J Phys Anthropol, 2011. © 2010 Wiley‐Liss, Inc.     

Assessment of hematologic and corticosterone response in free-living eastern box turtles (Terrapene carolina carolina) at capture and after handling

Hematology is a common tool for wildlife health assessments. Manual leukocyte counts are required in reptiles, however, disagreement between quantification methods has been observed in some chelonians. This study determined agreement between two methods of leukocyte quantification, eosinophilic leukopet, and blood film white blood cell (WBC) estimates, in free-living eastern box turtles (Terrapene carolina carolina). Simultaneously, we assessed the impact of handling duration on both leukocyte quantity and corticosterone levels. We collected blood at capture (<2 min from disturbance) and again before release 30–150 min later from 92 box turtles at six sites in Illinois and Tennessee. Constant and proportional error was present in the leukopet results for WBC, lymphocytes, and basophils compared to the estimate method. Both methods were in agreement for heterophils, monocytes, and eosinophils. Agreement between the methods was significantly more likely at WBC counts below 23,241/µl. All hematologic parameters were significantly higher at the final blood draw compared to the initial blood draw using both WBC determination methods, except relative eosinophil and basophil counts. Corticosterone levels varied with time, with maximum concentrations reached at 54 min postcapture, followed by a rapid return to baseline levels. Corticosterone level was not significantly associated with any hematologic parameter or sex. This study provides a framework for understanding the effects of animal handling methodology and diagnostic modality when evaluating hematologic health in box turtles.     

Differences in interproximal and occlusal tooth wear among prehistoric Tennessee Indians: implications for masticatory function

Breadth of the interproximal wear facet between lower P2 and M1 and between lower M1 and M2 was measured in human skeletal samples representing the Archaic, Woodland, and Mississippian periods of Tennessee River Valley prehistory, with the aim of assessing relative magnitudes of applied masticatory forces. When stratified by level of occlusal wear, mean interproximal facet breadth was consistently larger in the Archaic sample than in the Mississippi sample, with the Woodland sample intermediate. An analysis of covariance demonstrated that there was significant (p less than or equal to 0.01) differences in facet size among the three groups even when differencs in crown breadth were taken into account. Similar results were obtained in regressions of facet size on chronological age (Archaic larger than Mississippian at P less than or equal to 0.01). Since rate of occlusal wear appears to be somewhat greater in the Archaic sample than in the later samples, the differences in interproximal wear are probably underestimated. It is suggested that the high levels of interproximal wear in the Archaic are indicative of the large occlusal forces and repetitive chewing required to masticate a diet of seeds, wild plant foods, and small animals, for which prior preparation (e.g., grinding, cooking) was minimal or nonexistent (as indicated by paleofecal samples). The lower amounts of interproximal wear observed in the Woodland and Mississippian samples imply considerable reductions in strenous mastication, perhaps due to the widespread adoption during these period of pottery and the earth oven, together with ethnographically-documented techniques of food preparation that transformed most foods to a soft consistency.     

Mn(II)-oxidizing Bacteria are Abundant and Environmentally Relevant Members of Ferromanganese Deposits in Caves of the Upper Tennessee River Basin

The upper Tennessee River Basin contains the highest density of our nation's caves; yet, little is known regarding speleogenesis or Fe and Mn biomineralization in these predominantly epigenic systems. Mn:Fe ratios of Mn and Fe oxide-rich biofilms, coatings, and mineral crusts that were abundant in several different caves ranged from ca. 0.1 to 1.0 as measured using ICP-OES. At sites where the Mn:Fe ratio approached 1.0 this represented an order of magnitude increase above the bulk bedrock ratio, suggesting that biomineralization processes play an important role in the formation of these cave ferromanganese deposits. Estimates of total bacterial SSU rRNA genes in ferromanganese biofilms, coatings, and crusts measured approximately 7×10⁷–9×10⁹ cells/g wet weight sample. A SSU-rRNA based molecular survey of biofilm material revealed that 21% of the 34 recovered dominant (non-singleton) OTUs were closely related to known metal-oxidizing bacteria or clones isolated from oxidized metal deposits. Several different isolates that promote the oxidation of Mn(II) compounds were obtained in this study, some from high dilutions (10^–8–10^–10) of deposit material. In contrast to studies of caves in other regions, SSU rRNA sequences of Mn-oxidizing bacterial isolates in this study most closely matched those of Pseudomonas, Leptothrix, Flavobacterium, and Janthinobacterium. Combined data from geochemical analyses, molecular surveys, and culture-based experiments suggest that a unique consortia of Mn(II)-oxidizing bacteria are abundant and promoting biomineralization processes within the caves of the upper Tennessee River Basin.     

Cosmetophilus vonones, N. G., N. Sp., (Apicomplexa: Actinocephalidae) in the Harvestman Vonones sayi (Arachnida: Cosmetidae)

The gregarine Cosmetophilus vonones , n. g., n. sp. (Sporozoasida: Actinocephalidae: Acanthosporinae) from the intestine and intestinal caeca of the harvestman Vonones sayi (Simon) (Opiliones: Cosmetidae) is described. The new internal parasite is the first recorded from a harvestman in the New World and the second from the opilion suborder Laniatores. In addition to the records from the type locality in western Texas, additional collections are reported from the same host in central and eastern Texas and Tennessee.     

Morphological and molecular variation in the least madtom Noturus hildebrandi (Siluriformes: Ictaluridae), a Mississippi Embayment endemic: evidence for a cryptic lineage in the Hatchie River

Sheared principal component analysis of 40 morphometric characteristics measured for 146 individuals and relative frequencies of pigmentation patterns scored for 980 individuals of the least madtom Noturus hildebrandi, a diminutive catfish endemic to eastern lowland drainages of the Mississippi Embayment region of North America, suggested a clinal pattern of morphological variation extending across the range from north to south. DNA sequence data representing 90 individuals from the mitochondrial gene cytochrome b (cytb) analysed using Bayesian phylogenetic methods recovered four major haplotype clades, suggestive of a high degree of isolation by drainage. Individual gene trees of cytb and four additional nuclear loci as well as trees based on concatenated datasets of these genes consistently recovered a cryptic lineage of individuals from the Hatchie River drainage that is morphologically indistinguishable from surrounding populations. Gene‐tree analyses failed to recover a monophyletic N. hildebrandi with respect to Noturus baileyi. A coalescence‐based species tree analysis, however, did recover N. hildebrandi monophyly with high support, suggesting that relationships reflected in individual gene trees and concatenated datasets are in part artefacts of incomplete lineage sorting or an ancient introgressive event. Results are consistent with the hypothesis of an ancient connection between the Hatchie and Tennessee River systems. Current subspecific designations are of limited utility as they reflect morphological variation and are not entirely consistent with phylogeny. Discrepancies between the pattern of variation observed in the morphological and molecular data may be explained by recent local adaptation to individual stream conditions that masks deeper evolutionary divergences.     

Comparison of glycerophosphate acyltransferases from Euglena chloroplasts and microsomes

The acylation of sn-glycerol 3-phosphate is a common reaction in the pathways leading to the biosynthesis of glycerol-derived phospholipids, galactolipids, and sulfolipids. Enzymes catalyzing this reaction have been solubilized from Euglena chloroplasts, microsomes, and mitochondria (B. A. Boehler and M. L. Ernst-Fonberg (1976) Arch. Biochem. Biophys. 175, 229-235; L. V. Grobovsky, S. Hershenson, and M. L. Ernst-Fonberg (1979) FEBS Lett. 102, 261-264). Some characteristics of the reactions catalyzed by the acyl-CoA:sn-glycerol-3-phosphate O-acyltransferases (EC 2.3.1.15) solubilized from chloroplasts and microsomes of Euglena have been compared. Although the two enzymes have some common features, including stimulation by bovine serum albumin and phosphatidyl choline and sensitivity to sulfhydryl-binding reagents, they differ in their stabilities and responses to salt and glycerol. They exhibit different acyl-CoA substrate dependency curves. The proportions of monoacyl sn-glycerol-3-phosphate acyltransferase activity differ in the two solubilized enzyme preparations, and different products are produced by each of the glycerophosphate acyltransferases solubilized from chloroplasts and microsomes, respectively. Neither glycerophosphate acyltransferase will use palmitoyl- or myristoyl-acyl carrier protein (ACP) as a substrate whereas both use the corresponding CoA esters. Neither is inhibited by ACP, but the enzyme from microsomes is inhibited by CoA.     

Cascade control of E. coli glutamine synthetase. II. Metabolite regulation of the enzymes in the cascade.

Enzymes and regulatory proteins involved in the cascade control of glutamine synthetase activity of Escherichia coli have been separated from one another and the effects of numerous metabolites on each step in the cascade have been determined. The adenylyl transferase (ATase) -catalyzed adenylylation of glutamine synthetase, which requires the presence of the unmodified form of the regulatory protein PII is enhanced by glutamine and is inhibited by either α-ketoglutarate (α-KG) or the uridylylated form (PII·UMP) of the regulatory protein. PII·UMP and α-KG act synergistically to inhibit this activity. In contrast, the PII·UMP-dependent, ATase-catalyzed deadenylylation of glutamine synthetase requires α-KG and ATP and is inhibited by glutamine or PII and synergistically by glutamine plus PII. The capacity of uridylyl transferase (UTase) to catalyze the uridylylation of PII is dependent on the presence of α-KG and ATP and is inhibited by glutamine. The deuridylylation of PII·UMP by the uridylyl removing enzyme (UR) is enhanced by glutamine but is unaffected by α-KG. However, CMP, UMP, and CoA all inhibit activity at 10^?6m. High concentrations of ATase inhibit both UR and UTase activities, presumably by binding the regulatory protein. Of more than 50 substances that alter the activity of at least one enzyme in the cascade, only α-KG and glutamine affect the activity at every step. This accounts for the observation that glutamine synthetase activity in vivo is very sensitive to the intracellular ratio of α-KG to glutamine.     

Effect of ovarian transplantation to the uterus ("Estes operation") on reproduction in the rabbit

The effectiveness of the "Estes operation," which was developed to correct fertility problems in humans suffering from tubal incompetence, was studied using rabbits. The ovaries of mature does were surgically transplanted into their uteri and the effects of this altered state on reproduction, host tissue and graft tissue were appraised. Animals with transplanted ovaries showed normal breeding behavior, but the only pregnancies resulted when does that had received heterotransplanted ovaries also retained their own ovaries in situ . Young produced in those pregnancies were shown to have originated from ova ovulated from the host's normal ovaries. Transplanted ovaries disappeared from the uterus, either by resorption or expulsion, within eight weeks if they were separated from their pedicles but were retained if left attached to their pedicles. Presumably the difference reflects the state of vascularization. Scar tissue developed at the junction of ovary and uterus, and the endometrial epithelium became continuous with the germinal epithelium of the ovary. The uteri receiving pedicled ovaries retained their normal size. Those of ovariectomized does were about half the weight of normal uteri and those of ovariectomized does receiving unpedicled ovaries atrophied to a size about half those of the ovariectomized does. When intact does received heterotransplanted ovaries in their uteri, those uteri hypertrophied to approximately twice the size of normal uteri. The effects of transplanting ovaries to the uterine lumen, as reported here, could explain the poor pregnancy success rate in humans and the complete failure to achieve pregnancies in any other mammalian species by use of the "Estes operation."     

Cascade control of E. coli glutamine synthetase. I. Studies on the uridylyl transferase and uridylyl removing enzyme(s) from E. coli.

The state of adenylylation of glutamine synthetase in Escherichia coli is regulated by the adenylyl transferase, the PII regulatory protein, uridylyl transferase (UTase), and the uridylyl removing enzyme (UR). The regulatory protein exists in an unmodified state (PII) which promotes adenylylation and in a uridylylated form (PII·UMP) which promotes deadenylylation of glutamine synthetase. The UR and UTase enzymes catalyze the interconversion of PII and PII·UMP. The UR and UTase have been partially purified by chromatography over DEAE-cellulose, AH-Sepharose 4B, Sephadex G-200, and gel electrophoresis. The two activities co-purify at all steps in the isolation although preparations containing different ratios of UTase:UR activities have been isolated. These UR·UTase activities have apparent molecular weight of 140,000. Both activities are inactivated by sulfhydryl reagents, both activities are heat inactivated, and both are stabilized by high salt concentrations. Both activities are inhibited in the crude extract by dialyzable inhibitors, but the UR is also inhibited by a nondialyzable inhibitor. This endogenous inhibitor is of molecular weight greater than 100,000 daltons, and binds CMP and UMP which are the apparent inhibitory agents. CMP and UMP are antagonistic in their effects on the UR activity. No effect of the CMP, UMP, or the large inhibitor on the other steps in the cascade could be demonstrated. The Mn²⁺-supported UR activity was also shown to be inhibited by a number of divalent cations, particularly Zn²⁺.     

Celebrate Darwin Day, An Event for Education and Outreach in Evolutionary Biology

Darwin Day is an international celebration of Charles Darwin’s birthday, February 12, and is used as an occasion for education and outreach in evolutionary biology. I describe the history and structure of Darwin Day at the University of Tennessee, one of the oldest Darwin Day organizations in the world. I detail past events including speakers, themes, and advertising ideas that have worked for us and suggestions for getting a Darwin Day started. I encourage interested groups especially those at schools, museums, libraries, nature centers, and other institutions to adapt ideas from our organization to fit their own circumstances and to start planning their own Darwin Days for the celebration of Darwin’s 200th birthday in 2009.     

Gap-scale disturbance processes in secondary hardwood stands on the Cumberland Plateau,Tennessee, USA

Disturbance regimes in many temperate, old growth forests are characterized by gap-scale events. However, prior to a complex stage of development, canopy gaps may still serve as mechanisms for canopy tree replacement and stand structural changes associated with older forests. We investigated 40 canopy gaps in secondary hardwood stands on the Cumberland Plateau in Tennessee to analyze gap-scale disturbance processes in developing forests. Gap origin, age, land fraction, size, shape, orientation, and gap maker characteristics were documented to investigate gap formation mechanisms and physical gap attributes. We also quantified density and diversity within gaps, gap closure, and gap-phase replacement to examine the influence of localized disturbances on forest development. The majority of canopy gaps were single-treefall events caused by uprooted or snapped stems. The fraction of the forest in canopy gaps was within the range reported from old growth remnants throughout the region. However, gap size was smaller in the developing stands, indicating that secondary forests contain a higher density of smaller gaps. The majority of canopy gaps were projected to close by lateral crown expansion rather than height growth of subcanopy individuals. However, canopy gaps still provided a means for understory trees to recruit to larger size classes. This process may allow overtopped trees to reach intermediate positions, and eventually the canopy, after future disturbance events. Over half of the trees located in true gaps with intermediate crown classifications were Acer saccharum, A. rubrum, or Liriodendron tulipifera. Because the gaps were relatively small and close by lateral branch growth of perimeter trees, the most shade-tolerant A. saccharum has the greatest probability of becoming dominant in the canopy under the current disturbance regime. Half of the gap maker trees removed from the canopy were Quercus; however, Acer species are the most probable replacement trees. These data indicate that canopy gaps are important drivers of forest change prior to a complex stage of development. Even in relatively young forests, gaps provide the mechanisms for stands to develop a complex structure, and may be used to explain patterns of shifting species composition in secondary forests of eastern North America.     

An outbreak of blastomycosis in Eastern Tennessee

Most cases of blastomycosis are sporadic and only nine outbreaks representing a total of 112 cases have previously been reported. Less than half of these have been culture proven cases. Outbreaks have previously occurred in North Carolina, Minnesota, Illinois, Wisconsin and Virginia. We report three culturally confirmed cases of blastomycosis from Elizabethton, Tennessee, who had onset of illness within a one-week span of time. The patients presented with fever, chest pain, weight loss, poor appetite and myalgia. Each initially had a dry cough which became productive of purulent sputum as the illness progressed. Mild hemoptysis occurred during each patient's course. Serologic testing by immunodiffusion and enzyme immunoassay were positive and testing by complement fixation was negative in each case. The diagnosis was made by histopathology on transbronchial biopsy or transthoracic needle aspiration material. Each patient improved on ketoconazole therapy.     

Influence of drainage basin topography and elevation on carbon dioxide and methane supersaturation of stream water

The partial pressures of CO₂ (pCO₂) andCH₄ (pCH₄) in streams are not only governed byinstream processes, but also by transformations occurring in soil andgroundwater ecosystems. As such, stream water pCO₂ andpCH₄ can provide a tool to assess ecosystem respiration andanaerobic metabolism throughout drainage basins. We conducted three surveyssampling the gas content of streams in eastern Tennessee and western NorthCarolina to assess factors regulating ecosystem metabolism in catchmentswith contrasting geomorphologies, elevations and soil organic matterstorage. In our first survey, the influence of drainage basin geomorphologyon ecosystem respiration was examined by sampling streams drainingcatchments underlain by either shale or dolomite. Geomorphology isinfluenced by geology with shale catchments having shallower soils, broader,unconstrained valley floors compared with dolomite catchments.pCO₂ varied little between catchment types but increased froman average of 3340 ppmv in spring to 9927 ppmv in summer or 9.3 and 28 timesatmospheric equilibrium (pCO_2(equilib)), respectively. Incontrast, pCH₄ was over twice as high in streams drainingshale catchments (306 ppmv; pCH_4(equilib) = 116) compared withmore steeply incised dolomite basins (130 ppmv; pCH_4(equilib)= 51). Using the ratio of pCH₄:pCO₂ as an indexof anaerobic metabolism, shale catchments had nearly twice as muchanaerobiosis (pCH₄:pCO₂ = 0.046) than dolomitedrainages (pCH₄:pCO₂ = 0.024). In our secondsurvey, streams were sampled along an elevational gradient (525 to 1700 m)in the Great Smoky Mountains National Park, USA where soil organic matterstorage increases with elevation. pCO₂ did not vary betweenstreams but increased from 5340 ppmv (pCO_2(equilib) = 15) to8565 ppmv (pCO_2(equilib) = 24) from spring to summer,respectively. During spring pCH₄ was low and constant acrossstreams, but during summer increased with elevation ranging from 17 to 2068ppmv (pCH_4(equilib) = 10 to 1216). The contribution ofanaerobiosis to total respiration was constant during spring(pCH₄:pCO₂ = 0.017) but during summer increasedwith elevation from 0.002 at 524 m to 0.289 at 1286 m. In our last survey,we examined how pCO₂ and pCH₄ changed withcatchment size along two rivers (ca. 60 km stretches in both riverscorresponding to increases in basin size from 1.7–477km² and 2.5–275 km²). pCO₂and pCH₄ showed opposite trends, with pCO₂decreasing ca. 50% along the rivers, whereas pCH₄roughly doubled in concentration downstream. These opposing shifts resultedin a nearly five-fold increase of pCH₄:pCO₂along the rivers from a low of 0.012 in headwaters to a high of 0.266 65-kmdownstream. pCO₂ likely declines moving downstream asgroundwater influences on stream chemistry decreases, whereaspCH₄ may increase as the prevalence of anoxia in riversexpands due to finer-grained sediments and reduced hydrologic exchange withoxygenated surface water.     

Population viability analysis to identify management priorities for reintroduced Elk in the Cumberland Mountains,Tennessee

We used an individual-based population model to perform a viability analysis to simulate population growth (λ) of 167 elk (Cervus elaphus manitobensis; 71 male and 96 female) released in the Cumberland Mountains, Tennessee, to estimate sustainability (i.e., λ > 1.0) and identify the most appropriate options for managing elk restoration. We transported elk from Elk Island National Park, Alberta, Canada, and from Land Between the Lakes, Kentucky, and reintroduced them beginning in December 2000 and ending in February 2003. We estimated annual survival rates for 156 radio-collared elk from December 2000 until November 2004. We used data from a nearby elk herd in Great Smoky Mountains National Park to simulate pessimistic and optimistic recruitment and performed population viability analyses to evaluate sustainability over a 25-year period. Annual survival averaged 0.799 (Total SE = 0.023). The primary identifiable sources of mortality were poaching, disease from meningeal worm (Parelaphostrongylus tenuis), and accidents (environmental causes and unintentional harvest). Population growth given pessimistic recruitment rates averaged 0.895 over 25 years (0.955 in year 1 to 0.880 in year 25); population growth was not sustainable in 100% of the runs. With the most optimistic estimates of recruitment, mean λ increased to 0.967 (1.038 in year 1 to 0.956 in year 25) with 99.6% of the runs failing to be sustainable. We suggest that further translocation efforts to increase herd size will be ineffective unless survival rates are increased in the Cumberland Mountains. © 2011 The Wildlife Society.