Migration Routes and Staging Areas of Trans-Saharan Turtle Doves Appraised from Light-Level Geolocators

The identification of migration routes, wintering grounds and stopover sites are crucial issues for the understanding of the Palearctic-African bird migration system as well as for the development of relevant conservation strategies for trans-Saharan migrants. Using miniaturized light-level geolocators we report a comprehensive and detailed year round track of a granivorous trans-Saharan migrant, the European Turtle Dove (Streptopelia turtur). From five recovered loggers, our data provide new insights on migratory journeys and winter destinations of Turtle Doves originating from a breeding population in Western France. Data confirm that Turtle Doves wintered in West Africa. The main wintering area encompassed Western Mali, the Inner Delta Niger and the Malian/Mauritanian border. Some individuals also extended their wintering ranges over North Guinea, North-West of Burkina Faso and the Ivory-Coast. Our results reveal that all individuals did not spend the winter period at a single location; some of them experienced a clear eastward shift of several hundred kilometres. We also found evidence for a loop migration pattern, with a post-breeding migration flyway lying west of the spring route. Finally, we found that on their way back to breeding grounds Turtle Doves needed to refuel after crossing the Sahara desert. Contrary to previous suggestions, our data reveal that birds used stopover sites for several weeks, presumably in Morocco and North Algeria. This later finding is a crucial issue for future conservation strategies because environmental conditions on these staging areas might play a pivotal role in population dynamics of this declining species.     

Three-Dimensional Tracking of Small Aquatic Organisms Using Fluorescent Nanoparticles

Tracking techniques are vital for the understanding of the biology and ecology of organisms. While such techniques have provided important information on the movement and migration of large animals, such as mammals and birds, scientific advances in understanding the individual behaviour and interactions of small (mm-scale) organisms have been hampered by constraints, such as the sizes of existing tracking devices, in existing tracking methods. By combining biology, chemistry and physics we here present a method that allows three-dimensional (3D) tracking of individual mm-sized aquatic organisms. The method is based on in-vivo labelling of the organisms with fluorescent nanoparticles, so-called quantum dots, and tracking of the organisms in 3D via the quantum-dot fluorescence using a synchronized multiple camera system. It allows for the efficient and simultaneous study of the behaviour of one as well as multiple individuals in large volumes of observation, thus enabling the study of behavioural interactions at the community scale. The method is non-perturbing – we demonstrate that the labelling is not affecting the behavioural response of the organisms – and is applicable over a wide range of taxa, including cladocerans as well as insects, suggesting that our methodological concept opens up for new research fields on individual behaviour of small animals. Hence, this offers opportunities to focus on important biological, ecological and behavioural questions never before possible to address.     

Year-Round Schools and the Politics of Time

This ethnographic study explores the politics of time in a multitrack, "yearround" school in inner-city Los Angeles. We analyze different types and experiences of time within the school and time collisions across institutions in this densely populated immigrant community. Viewing time as a contested commodity, we examine the politics behind the presumed impartiality of the clock and calendar. The school's year-round schedule is especially problematic, involving multiple tracks with lengthened days and a shortened school year. We show how issues of educational equity go to the core of debates over alternative school schedules.     

Increased Endoparasite Infection in Late-Arriving Individuals of a Trans-Saharan Passerine Migrant Bird

Earlier migration in males than in females is the commonest pattern in migrating passerines and is positively related to size dimorphism and dichromatism. The early arrival of males is a costly trait that may confer reproductive advantages in terms of better territories and/or mates. Given the physiological cost of migration, early migrants are those in best condition and accordingly the prevalence, load, and/or diversity of parasites is expected to increase in both sexes for late migrants. To test this hypothesis, we sampled 187 trans-Saharan migrant garden warblers Sylvia borin and 64 resident serins Serinus serinus (as a control for potential circannual patterns in parasite load) during spring migration in Spain. We assessed the prevalence of blood parasites (Haemoproteus, Plasmodium, and Leucocytozoon) and the prevalence and load of intestinal parasites (mainly coccidians and spirurids). The relationship between parasite (prevalence, load, and richness) and the timing of passage through a stopover area was tested using generalized linear models. Protandry occurs in the monomorphic garden warbler and males migrated on average 5.5 days before females. Intestinal parasite richness increased with the date of migration. The timing of migration was unrelated to the presence or load of the other parasite groups analyzed. Our results support the idea that the timing of migration is a condition-dependent trait and suggests that multiple intestinal parasite infestations could delay migration in birds. Even in monomorphic species parasites may play a role in sexual selection by delaying the arrival of the most infected individuals at breeding grounds, thereby further increasing the benefits of mating with early-arriving individuals.     

Tracking Auxin Receptors Using Functional Approaches

Functional approaches toward the identification of auxin receptors developed along two major lines: the isolation and characterization of mutants or transgenic plants affected in their responses to the hormone and the study of early auxin effects at the cell level such as expression of specific genes or modifications of plasma membrane properties. The combination of these approaches with those aiming at the molecular characterization of auxin binding proteins as putative auxin receptors allowed to bring further insight into the mechanisms of auxin perception by plant cells. Studies of membrane responses to auxin clearly demonstrated the existence of elementary response chains to auxin at the plasma membrane, the activation of auxin responsive proteins leading to changes in the membrane potential via the stimulation of the proton pump ATPase or the modulation of ion channels. A two-component model is proposed for the organization of functional auxin perception units at the plasma membrane, comprising an auxin-binding moiety related to the major auxin-binding protein from maize (ZmER-abp1), associated to a transmembrane protein. Current research investigates the relevance of this model and tries to assess whether early responses at the plasma membrane share common perception or transduction steps with gene expression responses and participate in more integrated biological responses to auxin.     

Tracking Protests Using Geotagged Flickr Photographs

Recent years have witnessed waves of protests sweeping across countries and continents, in some cases resulting in political and governmental change. Much media attention has been focused on the increasing usage of social media to coordinate and provide instantly available reports on these protests. Here, we investigate whether it is possible to identify protest outbreaks through quantitative analysis of activity on the photo sharing site Flickr. We analyse 25 million photos uploaded to Flickr in 2013 across 244 countries and regions, and determine for each week in each country and region what proportion of the photographs are tagged with the word “protest” in 34 different languages. We find that higher proportions of “protest”-tagged photographs in a given country and region in a given week correspond to greater numbers of reports of protests in that country and region and week in the newspaper The Guardian. Our findings underline the potential value of photographs uploaded to the Internet as a source of global, cheap and rapidly available measurements of human behaviour in the real world.     

Geolocators map the wintering grounds of threatened Lesser Kestrels in Africa

Aim  To identify the wintering grounds of the threatened western European Lesser Kestrels to focus conservation efforts in those areas.
Location  Huelva Province, southern Spain, as breeding range, and western Africa (Senegal and Mauritania), as wintering range.
Methods  We used archival light level geolocators (1.5 g) to map the wintering areas and determine some characteristics of the migratory journeys of 20 adult Lesser Kestrels from the Iberian Peninsula tagged in 2007.
Results  Thirteen geolocators were recovered the following breeding season (2008) after attachment in 2007. Four recovered geolocators provided useful data. According to kernel density analyses, kestrels wintered near the Senegal River (border between Mauritania and Senegal). Pre-nuptial migration took longer than the post-nuptial migration, which may be the consequence of a loop migration.
Main conclusions  Geolocators have solved a crucial conservation question (i.e. the winter destination of western European Lesser kestrels), and these devices have thus proved useful to determine the location of the winter quarters of small sized migratory species. Our data indicate that European Lesser Kestrels winter in West Africa, in accordance with previous suggestions based on scattered observations during the winter months. This valuable information should serve to focus conservation efforts both in northern Senegal and southern Mauritania. Large roosts gathering thousands of lesser kestrels had been recorded in these areas over the years, but there was no previous confirmation of individuals staying all winter long. Specific and sustained protection of the roost sites, where the birds may be most vulnerable, should be sought in conjunction with local authorities.     

5种养殖鲟鱼怀卵差异及周年繁殖

2007年11月至2009年11月通过对12批次(共计5 207尾个体)解剖观察,统计了5种性成熟鲟鱼[西伯利亚鲟(Acipenser baeri)、俄罗斯鲟(A.gueldenstaedti)、施氏鲟(A.schrencki)、黑龙江杂交鲟(Huso dauricus ♀×A.schrencki ♂)和欧洲杂交鲟(H...     

Effect of Geolocators on Migration and Subsequent Breeding Performance of a Long-Distance Passerine Migrant

Geolocators are small light-weight data loggers used to track individual migratory routes, and their use has increased exponentially in birds. However, the effects of geolocators on individual performance are still poorly known. We studied geolocator effects on a long-distance migrating passerine bird, the northern wheatear (Oenanthe oenanthe L.). We asked the general question of whether geolocators affect migratory behaviour and subsequent reproductive performance of small passerines by comparing arrival time, breeding time, breeding success and survival of geolocator versus control birds of known identity and breeding history. During two years geolocator birds (n=37) displayed a lower apparent survival (30%) as compared to controls (45%, n=164). Furthermore, returning geolocator birds (n=12) arrived on average 3.5 days later, started laying eggs 6.3 days later, and had lower nest success (25%) than control birds (78%). Our results suggest that geolocators affect migratory performance with carry-over effects to the timing of breeding and reproductive success in the subsequent breeding season. We discuss the implications of such geolocator effects for the study of migratory strategies of small passerines in general and suggest how to identify and investigate such effects in the future.     

Optimal Tracking Controller Design for a Small Scale Helicopter

A model helicopter is more difficult to control than its full scale counterpart. This is due to its greater sensitivity to control inputs and disturbances as well as higher bandwidth of dynamics. This work is focused on designing practical tracking controller for a small scale helicopter following predefined trajectories. A tracking controller based on optimal control theory is synthesized as a part of the development of an autonomous helicopter. Some issues with regards to control constraints are addressed.The weighting between state tracking performance and control power expenditure is analyzed. Overall performance of the control design is evaluated based on its time domain histories of trajectories as well as control inputs.     

Extended Emitter Target Tracking Using GM-PHD Filter

If equipped with several radar emitters, a target will produce more than one measurement per time step and is denoted as an extended target. However, due to the requirement of all possible measurement set partitions, the exact probability hypothesis density filter for extended target tracking is computationally intractable. To reduce the computational burden, a fast partitioning algorithm based on hierarchy clustering is proposed in this paper. It combines the two most similar cells to obtain new partitions step by step. The pseudo-likelihoods in the Gaussian-mixture probability hypothesis density filter can then be computed iteratively. Furthermore, considering the additional measurement information from the emitter target, the signal feature is also used in partitioning the measurement set to improve the tracking performance. The simulation results show that the proposed method can perform better with lower computational complexity in scenarios with different clutter densities.     

Terrestrial Passive Integrated Transponder Antennae for Tracking Small Animal Movements

ABSTRACT Measuring terrestrial movements of small animals poses a substantial technological challenge. We developed very long (up to 130 m) passive integrated transponder (PIT) detectors with which we tracked salamanders (Caudata) migrating from breeding ponds to their upland habitat >200 m away. In all 60 trials, salamanders were detected when released near the antennae. In a second test, we tracked 7 of 14 tagged marbled salamanders (Ambystoma opacum) migrating >65 m, well beyond the area protected by existing wetland buffer regulations in Massachusetts, USA. The mean rate of movement for these salamanders (x̄ = 0.9 m/min; SE = 0.1 m/min) was substantially higher than rates of movement reported for related salamanders with radio-implants. These PIT antennae offer researchers a means to study small animal movements with less disruption of the animals’ natural movement patterns than is caused by other available techniques.     

Geolocators reveal an unsuspected moulting area for Isle of May Common Guillemots Uria aalge

Capsule Data from geolocators deployed on adult Common Guillemots from a colony in southeast Scotland indicated that they normally winter in the North Sea up to 1000?km southeast of the colony. However, one bird unexpectedly moved 3000?km northeast to moult in the Barents Sea.     

Cell Tracking Using Photoconvertible Proteins During Zebrafish Development

Embryogenesis is a dynamic process that is best studied by using techniques that allow the documentation of developmental changes in vivo. The use of genetically-encoded fluorescent proteins has proven a valuable strategy for elucidating dynamic morphogenetic processes as they occur in the intact organism. During the past decade, the development of photoactivatable and photoconvertible fluorescent proteins has opened the possibility to investigate the fate of discrete subpopulations of tagged proteins¹. Unlike photoactivatable proteins, photoconvertible fluorescent proteins (PCFPs) are readily tracked and imaged in their native emission state prior to photoconversion, making it easier to identify and select regions by optical inspection. PCFPs, such as Kaede², KikGR³, Dendra⁴ and EosFP⁵, can be shifted from green to red upon exposure to UV or blue light due to a His-Tyr-Gly tripeptide sequence which forms a green chromophore that can be photoconverted to a red one by a light-catalyzed β-elimination and subsequent extension of a π-conjugated system³. PCFPs and their monomeric variants are useful tools for tracking cells^6-10 and studying protein dynamics^11-14, respectively. During recent years, PCFPs have been expressed in different animal model, such as zebrafish⁶, chicken^7,8 and mouse^9,10 for cell fate tracking. Here we report a protocol for cell-specific photoconversion of PCFPs in the living zebrafish embryo and further tracking of photoconverted proteins at later developmental stages. This methodology allows studying, in a tissue-specific manner, cell biological events underlying morphogenesis in the zebrafish animal model.     

Tracking Marsupial Evolution Using Archaic Genomic Retroposon Insertions

The Australasian and South American marsupial mammals, such as kangaroos and opossums, are the closest living relatives to placental mammals, having shared a common ancestor around 130 million years ago. The evolutionary relationships among the seven marsupial orders have, however, so far eluded resolution. In particular, the relationships between the four Australasian and three South American marsupial orders have been intensively debated since the South American order Microbiotheria was taxonomically moved into the group Australidelphia. Australidelphia is significantly supported by both molecular and morphological data and comprises the four Australasian marsupial orders and the South American order Microbiotheria, indicating a complex, ancient, biogeographic history of marsupials. However, the exact phylogenetic position of Microbiotheria within Australidelphia has yet to be resolved using either sequence or morphological data analysis. Here, we provide evidence from newly established and virtually homoplasy-free retroposon insertion markers for the basal relationships among marsupial orders. Fifty-three phylogenetically informative markers were retrieved after in silico and experimental screening of ∼217,000 retroposon-containing loci from opossum and kangaroo. The four Australasian orders share a single origin with Microbiotheria as their closest sister group, supporting a clear divergence between South American and Australasian marsupials. In addition, the new data place the South American opossums (Didelphimorphia) as the first branch of the marsupial tree. The exhaustive computational and experimental evidence provides important insight into the evolution of retroposable elements in the marsupial genome. Placing the retroposon insertion pattern in a paleobiogeographic context indicates a single marsupial migration from South America to Australia. The now firmly established phylogeny can be used to determine the direction of genomic changes and morphological transitions within marsupials.     

Growth of Mountain Birch Seedlings in Early-Successional Patches: A Year-Round Perspective

Abstract: Seedlings of mountain birch ( Betula pubescens ssp. czerepanovii ), a subarctic tree, mainly survive and establish in early-successional patches with low vegetation cover. In particular, during the first years after seed germination, a rapid seedling growth rate is important for winter survival. Seedling growth rate is controlled by plant nitrogen (N) concentration. On a year-round perspective, the N concentration is influenced by N uptake rate during both summer and winter and by N loss during autumn. The aim of the present study was to evaluate the effects of autumn N loss and winter N uptake for seedling growth during summer. The study used young seedlings growing in situ in northern Sweden. Since the growth rate of whole plants cannot be measured in situ, it was estimated using a simple, empirical seedling growth model. The model was based on data from controlled experiments and validated using growth data from a field study. The field study included sequential seedling harvests which were carried out at two sites differing in altitude, from autumn 1994 until autumn 1996. The seedling growth model was used to simulate the effects on growth rate of autumn N losses and winter N uptake. It was found that a decrease in the amount of N lost in autumn and an increase in the amount of N taken up during winter could enhance the growth rate of mountain birch seedlings by the same order of magnitude as an increase in growing season soil temperature by 1 to 2 K.     

Geolocators reveal migratory connectivity between wintering and breeding areas of Golden‐winged Warblers

The conservation of migratory songbirds is often impeded by a lack of understanding of how populations in breeding and wintering areas are geographically linked (migratory connectivity). In recent years, light‐level geolocators have improved our understanding of migratory connectivity. Such information is valuable for evaluating how conservation efforts align between the breeding and non‐breeding areas of at‐risk species, and help to more effectively prioritize the allocation of conservation funding. Golden‐winged Warblers (Vermivora chrysoptera) are imperiled migratory songbirds, but the extent to which conservation efforts in their breeding and non‐breeding areas coincide with patterns of migratory connectivity are not well known. We used light‐level geolocators to evaluate the extent to which conservation actions targeting Golden‐winged Warblers in Nicaragua and in their breeding range in North America align with patterns of migratory connectivity. We recovered six of 22 geolocators that had been deployed on male Golden‐winged Warblers at the El Jaguar Reserve during the winter of 2015–2016. All six males migrated to breeding areas in the western Great Lakes region that includes eastern Minnesota, northern Wisconsin, southwestern Ontario, and Michigan's Upper Peninsula. All six males also had similar migration routes, with spring stopovers in southern Mexico, Guatemala, and Belize, a trans‐Gulf flight, and a stopover in the region of Louisiana, Arkansas, eastern Oklahoma, and Texas. Our results, in combination with those of previous studies, demonstrate strong migratory connectivity between portions of the breeding and winter distributions of Golden‐winged Warblers currently targeted for conservation. However, additional studies are needed to improve our understanding of the stopover ecology of Golden‐winged Warblers, especially in areas where they remain for extended periods of time. Finally, patterns of migratory connectivity revealed in our study should be used in combination with existing demographic parameters for Golden‐winged Warblers in the western Great Lakes and Nicaragua to help inform full life cycle population models for this imperiled songbird.     

Geolocators reveal migration and pre-breeding behaviour of the critically endangered Balearic Shearwater Puffinus mauretanicus

Using combined miniature archival light and salt-water immersion loggers, we characterise the year-round individual at-sea movements of Europe's only critically endangered seabird, the Balearic shearwater Puffinus mauretanicus, for the first time. Focusing on the non-breeding period, we show that all of the 26 breeding birds tracked from their breeding site on Mallorca in the Mediterranean Sea successfully made a 2-4 month migration into the Atlantic Ocean, where they utilised well-defined core areas off Portuguese and French coasts. As well as identifying high-risk areas in the Atlantic, our results confirm that breeding birds spend most of the year concentrated around productive waters of the Iberian shelf in the western Mediterranean. Migration phenology appeared largely unrelated to the subsequent (distinctly synchronous) breeding attempt, suggesting that any carry-over effects were compensated for during a long pre-laying period spent over winter in the Mediterranean. Using the light and salt-water immersion data alone we were also able to characterise the pattern of pre-laying visits to the colony in considerable detail, demonstrating that breeding pairs appear to coordinate their over-day visits using a high frequency of night-time visits throughout the winter. Our study shows that geolocation technology is a valuable tool for assessing the spatial distribution of risks to this critically endangered species, and also provides a low-impact method for remotely observing the detailed behaviour of seabird species that may be sensitive to disturbance from traditional study methods.     

Inferring Animal Densities from Tracking Data Using Markov Chains

The distributions and relative densities of species are keys to ecology. Large amounts of tracking data are being collected on a wide variety of animal species using several methods, especially electronic tags that record location. These tracking data are effectively used for many purposes, but generally provide biased measures of distribution, because the starts of the tracks are not randomly distributed among the locations used by the animals. We introduce a simple Markov-chain method that produces unbiased measures of relative density from tracking data. The density estimates can be over a geographical grid, and/or relative to environmental measures. The method assumes that the tracked animals are a random subset of the population in respect to how they move through the habitat cells, and that the movements of the animals among the habitat cells form a time-homogenous Markov chain. We illustrate the method using simulated data as well as real data on the movements of sperm whales. The simulations illustrate the bias introduced when the initial tracking locations are not randomly distributed, as well as the lack of bias when the Markov method is used. We believe that this method will be important in giving unbiased estimates of density from the growing corpus of animal tracking data.