耐镉促生菌株的分离鉴定及对大豆的促生效应

【背景】华南地区镉（Cd）污染严重,与有益微生物共生能够使作物通过直接或间接的机制解除镉毒,提高抗逆性,进而促进生长。耐镉促生菌剂具有广泛的应用前景。【目的】从华南地区受镉污染植株的根内和根际筛选出耐镉且能促进大豆生长的促生菌,以丰富促进田间大豆生产的优异菌种资源。【方法】采用平板划线法从植株的根内或根际分离菌株,通过生理生化特性和16S rRNA基因序列分析对分离菌株进行初步研究,利用盆栽试验探究镉胁迫下菌株对大豆生长的影响,通过测定丙二醛含量和总抗氧化能力探究菌株的耐镉机制。【结果】分离获得4株菌D1、D2、D3和D4,促生特性试验证明4株菌均具有溶磷、产吲哚乙酸和铁载体的能力。经16S rRNA基因序列分析鉴定,D1、D2、D3和D4菌株分别属于不动杆菌属、微小杆菌属、类芽孢杆菌属和普罗威登斯菌属。用这4株菌进行不同镉处理的大豆（巴西10号）盆栽试验,结果表明,4株菌均具有耐镉和促进大豆生长的作用。不添加镉的条件下,大豆接种D4菌株的地上部干重、根部干重和株高分别增加了28%、35%和31%;在添加20mg/kg-CdCl₂·5/2H₂...     

玉米根际高效溶磷菌的筛选、鉴定及促生效应研究

为获得玉米根际高效溶磷促生菌(Plant growth-promoting rhizobacteria,PGPR)并明确其促生特性,采用选择培养方法从玉米根际土壤筛选出优良PGPR 菌株,测定其溶磷及分泌吲哚乙酸(IAA)的能力,并对优良菌株进行鉴定;采用盆栽试验研究菌株的促生作用。结果分离到2 株优良PGPR 菌株CH07和FD11,其溶磷量分别为368.5 mg/L和321.5 mg/L,产IAA量分别为30.93 mg/L和15.93 mg/L。形态学特征、生理生化特征和16S rDNA 序列分析结果表明,CH07为芽孢杆菌属(Bacillus aryabhattai),FD11为链霉菌属(Streptomyces maritimus)。最后通过盆栽试验对这2株细菌分离物的促生效果进行比较,结果发现,CH07、FD11,尤其是CH07与FD11的复合物,对苋菜的株高及地上部鲜重有积极作用,可作为研制生物肥料的优良菌株资源。     

水霉拮抗放线菌的分离、筛选与鉴定

目的:以珍珠健康养殖水体底泥为材料分离放线菌,筛选对水产动物水霉病病原菌有抗菌活性的放线菌。方法:采用稀释涂布法,选用萘啶酮酸和放线菌酮双抗平板分离获得放线菌;以黄颡鱼和湘云鲫鱼卵水霉病原菌为靶标菌,采用琼脂块法测试所分离菌株抗水霉菌活性及其稳定性;对拮抗活性强的放线菌采用形态观察和16S r DNA序列分析进行分类鉴定。结果:从分离获得的27株放线菌中筛选出3株对水霉病原菌有拮抗活性的菌株QF1、DNC17和QHV2,其中QHV2抗菌活性与稳定性最好;形态学观察与16S r DNA序列分析结果表明QF1、DNC17和QHV2均属于链霉菌属(Streptomycete sp.),分别鉴定为Streptomyces diastatochromogenes、Streptomyces variabilis和Streptomyces collinus。结论:3株放线菌对水霉病原菌具有较好的拮抗活性,具有开发成抗水霉药物的潜在价值。     

In vitro analyses are not reliable predictors of the plant growth promotion capability of bacteria; a Pseudomonas fluorescens strain that promotes the growth and yield of wheat

Aims: In this study, we set out to identify bacteria that can be used to promote the growth of cereals, while concurrently investigating the merits of using a range of such tests to preselect bacteria for glasshouse studies. Methods and Results: A panel of 15 strains isolated from the rhizosphere and phyllosphere of cereals was tested for the ability to improve the germination of wheat seeds and for production of a range of factors associated with plant growth promotion. In parallel, all bacteria were tested for their ability to improve biomass and grain yield when applied as a soil amendment in glasshouse trials. Conclusions: There was no significant correlation between growth promotion potential in the glasshouse and the results of either the phenotypic or the germination tests. Glasshouse tests identified that only one strain, Pseudomonas fluorescens strain MKB37, gave a significant increase in head weight and grain yield. Significance and Impact of the Study: While this study has identified a candidate for further field tests, it has also highlighted the fact that the modes of action for plant growth‐promoting bacteria (PGPB) are still not fully understood, and that there is no efficient and effective screening method for identifying PGPB by laboratory tests.     

蛇足石杉内生细菌的分离鉴定及其促生特性

【背景】从植物中分离得到的内生细菌能产生多种多样的活性物质,能够促进宿主植物的生长发育,而目前对于珍稀野生药用植物蛇足石杉内生细菌分离及其促生功能的研究鲜见报道。【目的】从蛇足石杉中分离内生细菌并进行鉴定,从中筛选出具有多种促生功能的菌株,为蛇足石杉内生菌资源的开发利用提供参考。【方法】通过使用不同培养基对蛇足石杉不同组织部位的内生细菌进行分离,再根据菌落形态特征及16S rRNA基因序列测序比对进行菌种鉴定及系统发育分析,最后对菌株的固氮、溶磷、产铁载体、产吲哚乙酸(indole-3-acetic acid, IAA)这4种促生功能进行检测。【结果】从蛇足石杉根、茎、叶3种组织中共分离得到168株内生细菌,在分类学上归属于3门4纲5目6科16属,其中芽孢杆菌属(Bacillus)占55.95%,类芽孢杆菌属(Paenibacillus)占19.05%,为优势菌属;不同组织分离出的内生细菌数量与种类均有明显差异,表现为根部>茎部>叶部;从分离的内生细菌中筛选出95株具有固氮能力,76株具有溶磷能力,23株具有产铁载体能力,81株具有产IAA能力。【结论】从蛇足石杉分离的内生细菌具有丰富的物种多样性和促生功能,分布具有明显的组织特异性,并获得多株具有良好促生功能的菌株,为进一步开发菌肥资源提供了新的菌株材料,同时为进一步开发利用蛇足石杉内生菌资源奠定了基础。     

花生种子相关促生菌分离鉴定及功能评价

【背景】利用微生物促进植物健康生长是农业可持续发展的重要方向之一,而种子相关的促生菌可在植物生命周期早期与植物相互作用,对植物健康生长具有重要意义。【目的】发掘与利用种子相关促生菌的前提是筛选获得促生菌菌种资源,验证其益生能力,为其进一步应用与机理研究提供依据与支持。【方法】以花生种子为研究对象,从种子表面及种子内部分离纯化多株菌,测定菌株的固氮、解磷、解钾、吲哚乙酸合成和铁载体合成等促生能力,并验证菌株对常见植物病原菌的生长抑制特性;通过16S rRNA基因序列进行系统发育分析,确定分类地位;通过生物膜形成能力及根际定殖能力测定菌株在植物根际的生存能力;最后通过催芽及盆栽试验测定菌株对花生种子发芽及幼苗生长的影响。【结果】从花生种子表面、种子内和胚根内分离筛选到41株菌,均有吲哚乙酸合成能力,其中35株有固氮能力,2株有铁载体分泌能力,14株有植物病原菌生长抑制能力。各选一株为代表的菌株,即PS3、PE5和PR5,经16S rRNA基因序列比对分析鉴定为芽孢杆菌属(Bacillus)。PS3、PE5和PR5均可在MSgg液体培养基表面形成褶皱较强的生物膜,也可在花生根际形成有效定殖。催芽试验结果表明经过促生菌浸种后花生种子萌发率明显提高,在第2天时,PS5将发芽率由14.17%提高至38.33%,PE5发芽率提高至30.83%,PR5发芽率提高至39.17%。三株菌能够明显促进花生幼苗生长,PS5对花生幼苗苗高、根长、鲜重和干重分别提高21.82%、22.20%、37.11%和35.64%,PE5分别提高17.45%、18.93%、26.10%和21.18%,PR5分别提高23.11%、23.92%、38.66%和37.47%。【结论】筛选获得的花生种子相关促生菌,具有促进植物生长的潜力,明显促进种子萌发及幼苗生长,是良好的促生菌生物资源,具有较好的应用潜力。     

兰州唐古特白刺根际微生物分离鉴定

【目的】从兰州唐古特白刺根际分离得到对植物有潜在促生效果的功能微生物,为研发相关菌种制剂的研究奠定基础。【方法】通过平板划线法从其根际分离纯化出6株细菌,并对菌株进行形态特征观察、革兰氏染色等一系列生理生化试验。用藜麦检测各菌株的促生功能,并对具有优良促生作用的1个菌株16S rRNA基因进行分子鉴定及基因草图绘制。【结果】根据生化鉴定结果,6株细菌分别属于不动杆菌属(Acinetobacter)、土壤杆菌属(Agrobacterium)、类芽孢杆菌属(Paenibacillus)、芽孢杆菌属(Bacillus)、鞘氨醇单胞菌属(Sphingomonas)和假单胞菌属(Pseudomonas)。其中,16S rRNA基因鉴定BC4属于肠杆菌属(Enterobacter),具有较好的促生效果。【结论】BC4具有较好的促生效果,为兰州唐古特白刺菌种资源的开发和利用提供了一定的理论依据。     

植物铁吸收、转运和调控的分子机制研究进展

铁是植物正常生命活动所必需的微量矿质元素,铁离子的吸收、转运和利用是一个复杂的过程,很多基因参与了这一过程。本文对近10年来发现和分离的参与植物铁吸收、转运及调控的基因研究进展进行了综述。根据最近的研究结果,提出了植物控制铁吸收的分子调控模式(机理I)。     

施用氮、磷肥对作物体内养分含量的影响

２年四季盆栽试验结果表明：（１）施用磷肥能改善作物地上部生物学产量向籽粒分配．在Ｎ、Ｐ胁迫条件下,施Ｎ增加非经济产量与经济产量比值．（２）对于谷子,在Ｎ、Ｐ亏缺条件下,施Ｎ能增加茎叶含Ｎ量,降低Ｎ向籽粒中转移;施磷能改善Ｎ在茎叶与籽粒之间的分配。（３）对于小麦,在Ｎ或Ｐ胁迫条件下,补施Ｐ或Ｎ均能增加冠根吸Ｎ量之比,对于谷子,其对冠根吸Ｎ量之比影响与小麦完全不同．（４）谷子在Ｎ、Ｐ胁迫条件下,施Ｎ能降低Ｐ在籽粒中积累,施Ｐ却能显著地改善磷向籽粒中转移,小麦在Ｎ、Ｐ胁迫条件下,增施Ｐ或Ｎ均能显著改善磷向籽粒中转移。     

植物花色呈现的生物化学、分子生物学机制及其基因工程改良

文章综述了植物花色基因工程改良的前提、策略和特殊性。植物主要花色色素类黄酮、类胡萝卜素的合成途径和相关酶的基因表达已基本研究清楚,关键酶的基因已被克隆。花色的基因工程改良遵循一般植物基因工程规律,而且是系统工程,要求花器官特异性启动子,基本策略为抑制关键酶的基因表达、导入调节基因或新的外源基因。花色基因工程可能成为获得雄性不育的方式之一,应与传统育种技术有机结合,当然也存在安全性问题。     

Composition of leaf surface waxes of Triticum species: Variation with age and tissue

The composition of cuticular wax from plants of spring wheat (varieties Selkirk and Manitou) and of durum wheat (variety Stewart 63) at various stages of growth, and of wax from different parts of the plants varies considerably. Wax was analysed, without preliminary separation, by GLC using Dexsil 300 as liquid phase. Alcohols are major components of wax from leaf blades and β-diketones are major components of wax from leaf sheaths, especially the flag leaf sheath. Glaucousness of the leaf sheath is due to the high β-diketone content. In the first 50 days after germination, before sheaths and flag leaf are completely developed, the major component is octacosanol (> 50%). At 66 days, when sheath development is complete, β-diketone content is greatest. Hydrocarbon composition differs for wax from leaf blade and leaf sheath and also for different leaf blades and between adaxial and abaxial sides of the flag leaf. From 66 to 100 days ester content of wax increases, especially in Selkirk wheat, apparently due to formation of wax containing high proportions of esters of trans-α,β-unsaturated C₂₂ and C₂₄ acids. The content of these acids in the free fatty acids and of diesters based on these acids also increases during this period.     

Analysis of the bacterial community developing in the course of <Emphasis Type="Italic">Sphagnum</Emphasis> moss decomposition

Slow degradation of organic matter in acidic Sphagnum peat bogs suggests a limited activity of organotrophic microorganisms. Monitoring of the Sphagnum debris decomposition in a laboratory simulation experiment showed that this process was accompanied by a shift in the water color to brownish due to accumulation of humic substances and by the development of a specific bacterial community with a density of 2.4 × 10⁷ cells ml^?1. About half of these organisms are metabolically active and detectable with rRNA-specific oligonucleotide probes. Molecular identification of the components of this microbial community showed the numerical dominance of bacteria affiliated with the phyla Alphaproteobacteria, Actinobacteria, and Planctomycetes. The population sizes of the Firmicutes and Bacteroidetes, which are believed to be the main agents of bacterially-mediated decomposition in eutrophic wetlands, were low. The numbers of planctomycetes increased at the final stage of Sphagnum decomposition. The representative isolates of the Alphaproteobacteria were able to utilize galacturonic acid, the only low-molecular-weight organic compound detected in the water samples; the representatives of the Planctomycetes were able to decompose some heteropolysaccharides, which points to the possible functional role of these groups of microorganisms in the community under study. Thus, the composition of the bacterial community responsible for Sphagnum decomposition in acidic and low-mineral oligotrophic conditions seems to be fundamentally different from that of the bacterial community which decomposes plant debris in eutrophic ecosystems at neutral pH.     

Human p38α mitogen-activated protein kinase in the Asp168-Phe169-Gly170-in (DFG-in) state can bind allosteric inhibitor Doramapimod

Doramapimod (BIRB-796) is widely recognized as one of the most potent and selective type II inhibitors of human p38α mitogen-activated protein kinase (MAPK); however, the understanding of its binding mechanism remains incomplete. Previous studies indicated high affinity of the ligand to a so-called allosteric pocket revealed only in the ‘out’ state of the DFG motif (i.e. Asp168-Phe169-Gly170) when Phe169 becomes fully exposed to the solvent. The possibility of alternative binding in the DFG-in state was hypothesized, but the molecular mechanism was not known. Methods of bioinformatics, docking and long-time scale classical and accelerated molecular dynamics have been applied to study the interaction of Doramapimod with the human p38α MAPK. It was shown that Doramapimod can bind to the protein even when the Phe169 is fully buried inside the allosteric pocket and the kinase activation loop is in the DFG-in state. Orientation of the inhibitor in such a complex is significantly different from that in the known crystallographic complex formed by the kinase in the DFG-out state; however, the Doramapimod’s binding is followed by the ligand-induced conformational changes, which finally improve accommodation of the inhibitor. Molecular modelling has confirmed that Doramapimod combines the features of type I and II inhibitors of p38α MAPK, i.e. can directly and indirectly compete with the ATP binding. It can be concluded that optimization of the initial binding in the DFG-in state and the final accommodation in the DFG-out state should be both considered at designing novel efficient type II inhibitors of MAPK and homologous proteins.

Communicated by Ramaswamy H. Sarma     

Plant and Soil Nematodes: Societal Impact and Focus for the Future.

Plant and soil nematodes significandy impact our lives. Therefore, we must understand and manage these complex organisms so that we may continue to develop and sustain our food production systems, our natural resources, our environment, and our quality of life. This publication looks specifically at soil and plant nematology. First, the societal impact of nematodes and benefits of nematology research are briefly presented. Next, the opportunities facing nematology in the next decade are outlined, as well as the resources needed to address these priorities. The safety and sustainability of U.S. food and fiber production depends on public and administrative understanding of the importance of nematodes, the drastic effects of nematodes on many agricultural and horticultural crops, and the current research priorities of nematology.