Effects of elevated CO<Subscript>2</Subscript> and/or O<Subscript>3</Subscript> on hormone IAA in needles of Chinese pine

This study examined the effects of season-long exposure of Chinese pine (Pinus tabulaeformis) to elevated carbon dioxide (CO₂) and/or ozone (O₃) on indole-3-acetic acid (IAA) content, activities of IAA oxidase (IAAO) and peroxidase (POD) in needles. Trees grown in open-top chambers (OTC) were exposed to control (ambient O₃, 55 nmol mol⁻¹ + ambient CO₂, 350 μmol mol⁻¹, CK), elevated CO₂ (ambient O₃ + high CO₂, 700 μmol mol⁻¹, EC) and elevated O₃ (high O₃, 80 ± 8 nmol mol⁻¹ + ambient CO₂, EO) OTCs from 1 June to 30 September. Plants grown in elevated CO₂ OTC had a growth increase of axial shoot and needle length, compared to control, by 20% and 10% respectively, while the growth in elevated O₃ OTC was 43% and 7% less respectively, than control. An increase in IAA content and POD activity and decrease in IAAO activity were observed in trees exposed to elevated CO₂ concentration compared with control. Elevated O₃ decreased IAA content and had no significant effect on IAAO activity, but significantly increased POD activity. When trees pre-exposed to elevated CO₂ were transferred to elevated O₃ (EC–EO) or trees pre-exposed to elevated O₃ were transferred to elevated CO₂ (EO–EC), IAA content was lower while IAAO activity was higher than that transferred to CK (EC–CK or EO–CK), the change in IAA content was also related to IAAO activity. The results indicated that IAAO and POD activities in Chinese pine needles may be affected by the changes in the atmospheric environment, resulting in the change of IAA metabolism which in turn may cause changes in Chinese pine’s growth. An erratum to this article can be found at     

Fungal community composition and metabolism under elevated CO2 and O3

Atmospheric CO₂ and O₃ concentrations are increasing due to human activity and both trace gases have the potential to alter C cycling in forest ecosystems. Because soil microorganisms depend on plant litter as a source of energy for metabolism, changes in the amount or the biochemistry of plant litter produced under elevated CO₂ and O₃ could alter microbial community function and composition. Previously, we have observed that elevated CO₂ increased the microbial metabolism of cellulose and chitin, whereas elevated O₃ dampened this response. We hypothesized that this change in metabolism under CO₂ and O₃ enrichment would be accompanied by a concomitant change in fungal community composition. We tested our hypothesis at the free-air CO₂ and O₃ enrichment (FACE) experiment at Rhinelander, Wisconsin, in which Populus tremuloides, Betula papyrifera, and Acer saccharum were grown under factorial CO₂ and O₃ treatments. We employed extracellular enzyme analysis to assay microbial metabolism, phospholipid fatty acid (PLFA) analysis to determine changes in microbial community composition, and polymerase chain reaction–denaturing gradient gel electrophoresis (PCR–DGGE) to analyze the fungal community composition. The activities of 1,4-β-glucosidase (+37%) and 1,4,-β-N-acetylglucosaminidase (+84%) were significantly increased under elevated CO₂, whereas 1,4-β-glucosidase activity (−25%) was significantly suppressed by elevated O₃. There was no significant main effect of elevated CO₂ or O₃ on fungal relative abundance, as measured by PLFA. We identified 39 fungal taxonomic units from soil using DGGE, and found that O₃ enrichment significantly altered fungal community composition. We conclude that fungal metabolism is altered under elevated CO₂ and O₃, and that there was a concomitant change in fungal community composition under elevated O₃. Thus, changes in plant inputs to soil under elevated CO₂ and O₃ can propagate through the microbial food web to alter the cycling of C in soil.     

Influences of nitrogen load on the growth and photosynthetic responses of <Emphasis Type="Italic">Quercus serrata</Emphasis> seedlings to O<Subscript>3</Subscript>

The objectives of this study were to clarify the influences of nitrogen (N) load on the growth and photosynthetic responses of Quercus serrata seedlings to O₃ and to obtain basic data for evaluating the critical levels of O₃ for protecting Q. serrata forests in Japan. The effects of O₃ and/or N load on growth and photosynthetic activity of Q. serrata seedlings were investigated during the two growing seasons. Two-year-old seedlings were assigned to 12 experimental treatments, which were comprised of the combination of four gas treatments (charcoal-filtered air and three levels of O₃ at 1.0, 1.5 and 2.0 times ambient concentration) and three N treatments (0, 20 and 50 kg ha⁻¹ year⁻¹). During the second growing season, no significant interactive effects of O₃ and N load on the growth and net photosynthetic rate of the seedlings were detected. Threrfore, we concluded that N supply to the soil at ≤50 kg ha⁻¹ year⁻¹ does not significantly influence the growth and photosynthetic responses of Q. serrata seedlings to O₃. Based on the O₃ exposure-response relationships for the whole-plant growth of the seedlings, the critical level of O₃ for Q. serrata was estimated to be approximately 36 nmol mol⁻¹ as the average 15-h O₃ concentration during the one growing season.     

Elevated CO<Subscript>2</Subscript> ameliorated oxidative stress induced by elevated O<Subscript>3</Subscript> in <Emphasis Type="Italic">Quercus mongolica</Emphasis>

Using open top chambers, the effects of elevated O₃ (80 nmol mol⁻¹) and elevated CO₂ (700 μmol mol⁻¹), alone and in combination, were studied on young trees of Quercus mongolica. The results showed that elevated O₃ increased malondialdehyde content and decreased photosynthetic rate after 45 days of exposure, and prolonged exposure (105 days) induced significant increase in electrolyte leakage and reduction of chlorophyll content. All these changes were alleviated by elevated CO₂, indicating that oxidative stress on cell membrane and photosynthesis was ameliorated. After 45 days of exposure, elevated O₃ stimulated activities of superoxide dismutase (SOD, EC 1.15.1.1) and ascorbate peroxidase (APX, EC 1.11.1.11), but the stimulation was dampened under elevated CO₂ exposure. Furthermore, ascorbate (AsA) and total phenolics contents were not higher in the combined gas treatment than those in elevated O₃ treatment. It indicates that the protective effect of elevated CO₂ against O₃ stress was achieved hardly by enhancing ROS scavenging ability after 45 days of exposure. After 105 days of exposure, elevated O₃ significantly decreased activities of SOD, catalase (CAT, EC 1.11.1.6) and APX and AsA content. Elevated CO₂ suppressed the O₃-induced decrease, which could ameliorate the oxidative stress in some extent. In addition, elevated CO₂ increased total phenolics content in the leaves both under ambient O₃ and elevated O₃ exposure, which might contribute to the protection against O₃-induced oxidative stress as well.     

Soil respiration in northern forests exposed to elevated atmospheric carbon dioxide and ozone

The aspen free-air CO₂ and O₃ enrichment (FACTS II–FACE) study in Rhinelander, Wisconsin, USA, is designed to understand the mechanisms by which young northern deciduous forest ecosystems respond to elevated atmospheric carbon dioxide (CO₂) and elevated tropospheric ozone (O₃) in a replicated, factorial, field experiment. Soil respiration is the second largest flux of carbon (C) in these ecosystems, and the objective of this study was to understand how soil respiration responded to the experimental treatments as these fast-growing stands of pure aspen and birch + aspen approached maximum leaf area. Rates of soil respiration were typically lowest in the elevated O₃ treatment. Elevated CO₂ significantly stimulated soil respiration (8–26%) compared to the control treatment in both community types over all three growing seasons. In years 6–7 of the experiment, the greatest rates of soil respiration occurred in the interaction treatment (CO₂ + O₃), and rates of soil respiration were 15–25% greater in this treatment than in the elevated CO₂ treatment, depending on year and community type. Two of the treatments, elevated CO₂ and elevated CO₂ + O₃, were fumigated with ¹³C-depleted CO₂, and in these two treatments we used standard isotope mixing models to understand the proportions of new and old C in soil respiration. During the peak of the growing season, C fixed since the initiation of the experiment in 1998 (new C) accounted for 60–80% of total soil respiration. The isotope measurements independently confirmed that more new C was respired from the interaction treatment compared to the elevated CO₂ treatment. A period of low soil moisture late in the 2003 growing season resulted in soil respiration with an isotopic signature 4–6‰ enriched in ¹³C compared to sample dates when the percentage soil moisture was higher. In 2004, an extended period of low soil moisture during August and early September, punctuated by a significant rainfall event, resulted in soil respiration that was temporarily 4–6‰ more depleted in ¹³C. Up to 50% of the Earth’s forests will see elevated concentrations of both CO₂ and O₃ in the coming decades and these interacting atmospheric trace gases stimulated soil respiration in this study.     

Altered genotypic and phenotypic frequencies of aphid populations under enriched CO2 and O3 atmospheres

Environmental change is anticipated to negatively affect both plant and animal populations. As abiotic factors rapidly change habitat suitability, projections range from altered genetic diversity to wide-spread species loss. Here, we assess the degree to which changes in atmospheric composition associated with environmental change will influence not only the abundance, but also the genotypic/phenotypic diversity, of herbivore populations. Using free-air CO₂ and O₃ enrichment (FACE) technology, we assess numerical responses of pea aphids (Acyrthosiphon pisum) exhibiting a pink–green genetic polymorphism and an environmentally determined wing polyphenism on broad bean plants (Vicia faba) under enriched CO₂ and/or O₃ atmospheres, over multiple generations. We show that these two greenhouse gases alter not only aphid population sizes, but also genotypic and phenotypic frequencies. As the green genotype was positively influenced by elevated CO₂ levels, but the pink genotype was not, genotypic frequencies (pink morph : green morph) ranged from 1 : 1 to 9 : 1. These two genotypes also displayed marked differences in phenotypic frequencies. The pink genotype exhibited higher levels of wing induction under all atmospheric treatments, however, this polyphenism was negatively influenced by elevated O₃ levels. Resultantly, frequencies of winged phenotypes (pink morph : green morph) varied from 10 : 1 to 332 : 1. Thus, atmospheric conditions associated with environmental change may alter not just overall population sizes, but also genotypic and phenotypic frequencies of herbivore populations, thereby influencing community and ecosystem functioning.     

Effects of elevated ozone concentration on methane emission from a rice paddy in Yangtze River Delta,China

Few investigations have been made on the impact of elevated ozone (O₃) concentration on methane (CH₄) emission from rice paddies. Using open‐top chambers in situ with different O₃ treatments, CH₄ emissions were measured in a rice paddy in Yangtze River Delta, China in 2007 and 2008. There were four treatments applied: charcoal‐filtered air (CF), nonfiltered air (NF), and charcoal‐filtered air with different O₃ additions (O₃‐1 and O₃‐2). The mean O₃ concentrations during the O₃ fumigation were 19.7, 22.6, 69.6 and 118.6 ppb in 2007 and 7.0, 17.4, 82.2 and 138.3 ppb in 2008 for treatments CF, NF, O₃‐1 and O₃‐2, respectively. The rice yields, as compared with CF, were reduced by 32.8% and 37.1%, 58.3% and 52.1% in treatments O₃‐1 and O₃‐2 in 2007 and 2008, respectively. The diurnal patterns of CH₄ emission varied temporally with treatments and there was inconsistence in diurnal variations in CH₄ emissions from the paddy field. The daily mean CH₄ emissions were significantly lower in treatments O₃‐1 and O₃‐2 than those in treatments CF and NF. Compared with CF treatment, CH₄ emissions from the paddy field were decreased to 46.5% and 38.3%, 50.6% and 46.8% under treatments O₃‐1 and O₃‐2 in the whole growing seasons of 2007 and 2008, respectively. The seasonal mean CH₄ emissions were negatively related with AOT40 (accumulative O₃ concentration above 40 ppb; P < 0.01 in both years), but positively related to the relative rice yield (reference to CF; P < 0.01 in 2007 and P < 0.001 in 2008), aboveground biomass (P < 0.01 in both years) and underground biomass (P < 0.01 in 2007 and P < 0.05 in 2008). The decreased CH₄ emission from the rice paddy due to an increased O₃ exposure might partially mitigate the global warming potential induced by soil carbon loss under elevated O₃ concentrations.     

Biomass responses to elevated CO<Subscript>2</Subscript>, soil heterogeneity and diversity: an experimental assessment with grassland assemblages

While it is well-established that the spatial distribution of soil nutrients (soil heterogeneity) influences the competitive ability and survival of individual plants, as well as the productivity of plant communities, there is a paucity of data on how soil heterogeneity and global change drivers interact to affect plant performance and ecosystem functioning. To evaluate the effects of elevated CO₂, soil heterogeneity and diversity (species richness and composition) on productivity, patterns of biomass allocation and root foraging precision, we conducted an experiment with grassland assemblages formed by monocultures, two- and three-species mixtures of Lolium perenne, Plantago lanceolata and Holcus lanatus. The experiment lasted for 90 days, and was conducted on microcosms built out of PVC pipe (length 38 cm, internal diameter 10 cm). When nutrients were heterogeneously supplied (in discrete patches), assemblages exhibited precise root foraging patterns, and had higher total, above- and belowground biomass. Greater aboveground biomass was observed under elevated CO₂. Species composition affected the below:aboveground biomass ratio and interacted with nutrient heterogeneity to determine belowground and total biomass. Species richness had no significant effects, and did not interact with either CO₂ or nutrient heterogeneity. Under elevated CO₂ conditions, the two- and three-species mixtures showed a clear trend towards underyielding. Our results show that differences among composition levels were dependent on soil heterogeneity, highlighting its potential role in modulating diversity–productivity relationships. Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible to authorized users.     

冬季覆盖作物秸秆还田对双季稻田根际土壤微生物群落功能多样性的影响

微生物群落功能多样性是土壤质量变化重要的指标,不同作物类型的秸秆还田措施对土壤微生物群落功能多样性具有明显的影响。以位于双季稻主产区不同冬季覆盖作物-双季稻种植模式大田定位试验田为研究对象,以冬闲-双季稻种植模式为对照(CK),应用Biolog-GN技术开展黑麦草-双季稻(Ry)、紫云英-双季稻(Mv)、油菜-双季稻(Ra)和马铃薯-双季稻(Po)种植模式条件下不同冬季覆盖作物秸秆还田后对双季稻田根际土壤微生物功能多样性影响的研究。研究结果表明,早稻和晚稻成熟期,与CK处理相比,冬季覆盖作物秸秆还田处理增加了稻田土壤碳源平均颜色变化率(AWCD),以Po处理AWCD均为最高,均显著高于Ry和CK处理。不同冬季覆盖作物秸秆还田处理土壤微生物代谢多样性指数表现出明显的差异,早稻成熟期,Po处理的Richness、Shannon和McIntosh指数均为最高,其次为Ry、Mv和Ra处理,CK处理最低;晚稻成熟期,各处理的Richness、Shannon和McIntosh指数大小顺序均表现为PoRaMvRyCK。土壤微生物碳源利用的主成分分析结果表明,各冬季覆盖作物秸秆还田处理根际土壤微生物利用的主要碳源为氨基酸类和糖类物质,不同处理间碳源利用类型有差异。冬季覆盖作物秸秆还田措施有利于提高双季稻田根际土壤微生物对碳源的利用能力、物种丰富度和均匀度。     

Subsurface CO<Subscript>2</Subscript> Dynamics in Temperate Beech and Spruce Forest Stands

Rates of soil respiration (CO₂ effluxes), subsurface pore gas CO₂/O₂ concentrations, soil temperature and soil water content were measured for 15 months in two temperate and contrasting Danish forest ecosystems: beech (Fagus sylvatica L.) and Norway spruce (Picea abies [L.] Karst.). Soil CO₂ effluxes showed a distinct seasonal trend in the range of 0.48–3.3 μmol CO₂ m⁻² s⁻¹ for beech and 0.50–2.92 μmol CO₂ m⁻² s⁻¹ for spruce and were well-correlated with near-surface soil temperatures. The soil organic C-stock (upper 1 m including the O-horizon) was higher in the spruce stand (184±23 Mg C ha⁻¹) compared to the beech stand (93±19 Mg C ha⁻¹) and resulted in a faster turnover time as calculated by mass/flux in soil beneath the beech stand (28 years) compared to spruce stand (60 years). Observed soil CO₂ concentrations and effluxes were simulated using a Fickian diffusion-reaction model based on vertical CO₂ production rates and soil diffusivity. Temporal trends were simulated on the basis of observed trends in the distribution of soil water, temperature, and live roots as well as temperature and water content sensitivity functions. These functions were established based on controlled laboratory incubation experiments. The model was successfully validated against observed soil CO₂ effluxes and concentrations and revealed that temporal trends generally could be linked to variations in subsurface CO₂ production rates and diffusion over time and with depths. However, periods with exceptionally high CO₂ effluxes (> 20 μmol CO₂ m⁻² s⁻¹) were noted in March 2000 in relation to drying after heavy rain and after the removal of snow from collars. Both cases were considered non-steady state and could not be simulated.     

Allantoin involved in species interactions with rice and other organisms in paddy soil

Allantoin (5-ureidohydantoin) plays an essential role in the assimilation, metabolism, transport, and storage of nitrogen in numerous higher plants, but its ecological implications are largely unknown. In this study allantoin was found in tissues of 11 rice (Oryza sativa) varieties tested, and its structure was characterised by X-ray diffraction analysis to confirm the fact that allantoin was actually obtained from the rice plants. Furthermore, the endogenous allantoin was exuded from the rice roots into the rhizosphere soils and had a great diversity of biological effects on associated weeds and microbes by soil interactions once released. However, allantoin levels in tissues or soils could not be distinguished between the allelopathic and non-allelopathic rice varieties. Field experiments showed that levels of allantoin released from rice varieties varied with their growth stages and reached the maximal levels at the stem elongation or panicle initiation to booting stages and then decreased dramatically. Allantoin could significantly stimulate the germination and growth of Echinochloa crus-galli and populations of soil bacteria and actinomycetes at selected test concentrations (30–500 μg/g), but had no effect on soil fungi. The half-life (t _1/2 ) of allantoin in autoclaved soil (20.2 ± 2.5 h, r ² = 0.95) was almost three-times longer than in non-autoclaved soil (7.3 ± 1.9 h, r ² = 0.92), indicating that rapid biodegradation or transformation of allantoin occurs in paddy soil. The results suggest that not only may allantoin play a role in the transport and storage of nitrogen in rice tissues but it may also participate in species interactions between rice and other organisms in paddy soil.     

Elevated CO<Subscript>2</Subscript> influences herbivory-induced defense responses of <Emphasis Type="Italic">Arabidopsis thaliana</Emphasis>

We experimentally demonstrate that elevated CO₂ can modify herbivory-induced plant chemical responses in terms of both total and individual glucosinolate concentrations. Overall, herbivory by larvae of diamondback moths (Plutella xylostella) resulted in no change in glucosinolate levels of the annual plant Arabidopsis thaliana under ambient CO₂ conditions. However, herbivory induced a significant 28–62% increase in glucosinolate contents at elevated CO₂. These inducible chemical responses were both genotype-specific and dependent on the individual glucosinolate considered. Elevated CO₂ can also affect structural defenses such as trichomes and insect-glucosinolate interactions. Insect performance was significantly influenced by specific glucosinolates, although only under CO₂ enrichment. This study can have implications for the evolution of inducible defenses and coevolutionary adaptations between plants and their associated herbivores in future changing environments.     

Growth and photosynthetic responses of <Emphasis Type="Italic">Fagus crenata</Emphasis> seedlings to O<Subscript>3 </Subscript>under different nitrogen loads

To obtain the basic data for evaluating the critical level of ozone (O₃) to protect Japanese deciduous broad-leaved forest tree species, the growth and photosynthetic responses of Fagus crenata seedlings to O₃ under different nitrogen (N) loads were investigated. The seedlings were grown in potted andisol supplied with N as NH₄NO₃ solution at 0, 20 or 50 kg ha⁻¹ year⁻¹ and were exposed to charcoal-filtered air or O₃ at 1.0, 1.5 and 2.0 times the ambient concentration for two growing seasons. The interactive effect of O₃ and N load on the whole-plant dry mass of the seedlings at the end of the second growing season was significant. The O₃-induced reduction in the whole-plant dry mass of the seedlings was greater in the relatively high N treatment than that in the low N treatment. This interactive effect was mainly due to the difference in the degree of O₃-induced reduction in net photosynthesis among the N treatments. The degree of O₃-induced reduction in N availability to photosynthesis was greater in the relatively high N treatment than that in the low N treatment. In conclusion, the sensitivity of growth and photosynthetic parameters of F. crenata seedlings to O₃ become high with increasing amounts of N added to the soil. Therefore, N deposition from the atmosphere should be taken into account to evaluate the critical level of O₃ to protect Japanese deciduous broad-leaved forest tree species.     

Diversity of aerobic anoxygenic phototrophic bacteria in paddy soil and their response to elevated atmospheric CO2

Aerobic anoxygenic phototrophic bacteria (AAnPB) are recognized as an important group driving the global carbon cycling. However, the diversity of AAnPB in terrestrial environment remains largely unknown as well as their responses to the elevated atmospheric CO₂. By using culture‐independent techniques, the diversity of AAnPB in paddy soil and the changes in response to the rising atmospheric CO₂ were investigated within China FACE (Free‐air CO₂ enrichment) platform. There was a phylogenetically diverse AAnPB community with large population size residing in paddy soil. The community structure of AAnPB in bulk and rhizospheric soils stayed almost identical, while the population size was higher in rhizospheric [2.0–2.5 × 10⁸ copy number of pufM genes g^?1 dry weight soil (d.w.s.)] than that in bulk (0.7–0.8 × 10⁸ g^?1 d.w.s.) soils. Elevated atmospheric CO₂ appeared to significantly stimulate AAnPB abundance (up to 1.4–1.5 × 10⁸ g^?1 d.w.s.) and result in a higher AAnPB percentage in total bacterial community (from 0.5% up to 1.5%) in bulk soil, whereas no significant effect was observed in rhizospheric soil. Our results would extend the functional ecotypes of AAnPB and indicate that environmental changes associated with the rising atmospheric CO₂ might affect AAnPB community in paddy soil.     

Foliar quality influences tree-herbivore-parasitoid interactions: effects of elevated CO<Subscript>2</Subscript>, O<Subscript>3</Subscript>, and plant genotype

This study examined the effects of carbon dioxide (CO₂)-, ozone (O₃)-, and genotype-mediated changes in quaking aspen (Populus tremuloides) chemistry on performance of the forest tent caterpillar (Malacosoma disstria) and its dipteran parasitoid (Compsilura concinnata) at the Aspen Free-Air CO₂ Enrichment (FACE) site. Parasitized and non-parasitized forest tent caterpillars were reared on two aspen genotypes under elevated levels of CO₂ and O₃, alone and in combination. Foliage was collected for determination of the chemical composition of leaves fed upon by forest tent caterpillars during the period of endoparasitoid larval development. Elevated CO₂ decreased nitrogen levels but had no effect on concentrations of carbon-based compounds. In contrast, elevated O₃ decreased nitrogen and phenolic glycoside levels, but increased concentrations of starch and condensed tannins. Foliar chemistry also differed between aspen genotypes. CO₂, O₃, genotype, and their interactions altered forest tent caterpillar performance, and differentially so between sexes. In general, enriched CO₂ had little effect on forest tent caterpillar performance under ambient O₃, but reduced performance (for insects on one aspen genotype) under elevated O₃. Conversely, elevated O₃ improved forest tent caterpillar performance under ambient, but not elevated, CO₂. Parasitoid larval survivorship decreased under elevated O₃, depending upon levels of CO₂ and aspen genotype. Additionally, larval performance and masses of mature female parasitoids differed between aspen genotypes. These results suggest that host-parasitoid interactions in forest systems may be altered by atmospheric conditions anticipated for the future, and that the degree of change may be influenced by plant genotype.     

Analysis of field-moist Cd contaminated paddy soils during rice grain fill allows reliable prediction of grain Cd levels

Research undertaken over the last 40 years has confirmed that the long-term consumption of cadmium (Cd) contaminated rice contributes to human Cd disease. Rice is the staple of millions throughout South and Southeast Asia. Therefore, the ability to accurately assess the risk of rice grain Cd uptake in areas of elevated soil Cd would be a pre-requisite to protecting public health and regional export security. During 2001–2002, 308 concomitant soil and rice grain samples were collected from a Cd/Zn co-contaminated site in Western Thailand and determined for aqua regia digested soil Cd and rice grain Cd. No significant relationship was observed between total soil Cd and rice grain Cd (r ² = 0.117). This intuitively is to be expected since total soil Cd bears no relationship to phyto-available Cd. Similarly no relationship was observed between 0.005 M DTPA extractable soil (air-dry) Cd and rice grain Cd (r ² = 0.165). Again this result could have been predicted as the phyto-availability of Cd in paddy soils is a function of the complex interaction between soil pH, redox conditions and the presence of competing ions. Consequently, in 2003 a further study was undertaken to assess the effectiveness of commonly utilized soil extractants namely, 0.1, 0.05 and 0.01 M CaCl₂ solutions at a soil extractant ratio of 1:5 and 1 M NH₄NO₃ for 2 h or 4 h extractions times at a soil/extractant ratio of 1:2.5. Soil samples were collected at the critical rice grain fill stage and sub-divided into Portion A which was subjected to conventional air-drying and sample preparation procedures and Portion B which was maintained at Field Condition (FC) and stored at <4°C until extractions were undertaken. Concomitant rice grain samples were collected at maturity. The results indicate that air-dried soil samples subjected to conventional soil preparation procedures were totally ineffective at predicting the uptake of Cd by rice stem, leaf or grain, regardless of extractant. Further, the results indicate that the Stepwise Regression model incorporating 0.1 M CaCl₂ extractable Cd and soil pH_w determined on field moist samples accounts for 63.8% of the variability in rice grain Cd.     

Fungal community composition and function after long‐term exposure of northern forests to elevated atmospheric CO2 and tropospheric O3

The long‐term effects of rising atmospheric carbon dioxide (CO₂) and tropospheric O₃ concentrations on fungal communities in soil are not well understood. Here, we examine fungal community composition and the activities of cellobiohydrolase and N‐acetylglucosaminidase (NAG) after 10 years of exposure to 1.5 times ambient levels of CO₂ and O₃ in aspen and aspen–birch forest ecosystems, and compare these results to earlier studies in the same long‐term experiment. The forest floor community was dominated by saprotrophic fungi, and differed slightly between plant community types, as did NAG activity. Elevated CO₂ and O₃ had small but significant effects on the distribution of fungal genotypes in this horizon, and elevated CO₂ also lead to an increase in the proportion of Sistotrema spp. within the community. Yet, although cellobiohydrolase activity was lower in the forest floor under elevated O₃, it was not affected by elevated CO₂. NAG was also unaffected. The soil community was dominated by ectomycorrhizal species. Both CO₂ and O₃ had a minor effect on the distribution of genotypes; however, phylogenetic analysis indicated that under elevated O₃Cortinarius and Inocybe spp. increased in abundance and Laccaria and Tomentella spp. declined. Although cellobiohydrolase activity in soil was unaffected by either CO₂ or O₃, NAG was higher (～29%) under CO₂ in aspen–birch, but lower (～18%) under aspen. Time series analysis indicated that CO₂ increased cellulolytic enzyme activity during the first 5 years of the experiment, but that the magnitude of this effect diminished over time. NAG activity also showed strong early stimulation by elevated CO₂, but after 10 years this effect is no longer evident. Elevated O₃ appears to have variable stimulatory and repressive effects depending on the soil horizon and time point examined.     

Identification of <Emphasis Type="Italic">qSOR1</Emphasis>, a major rice QTL involved in soil-surface rooting in paddy fields

Specific Indonesian lowland rice (Oryza sativa L.) cultivars elongate thick primary roots on the soil surface of paddy fields. To clarify the genetic factors controlling soil-surface rooting, we performed quantitative trait locus (QTL) analyses using 124 recombinant inbred lines (RILs) derived from a cross between Gemdjah Beton, an Indonesian lowland rice cultivar with soil-surface roots, and Sasanishiki, a Japanese lowland rice cultivar without soil-surface roots. These cultivars and the RILs were tested for soil-surface rooting in a paddy field. We identified four regions of chromosomes 3, 4, 6, and 7 that were associated with soil-surface rooting in the field. Among them, one major QTL was located on the long arm of chromosome 7. This QTL explained 32.5–53.6% of the total phenotypic variance across three field evaluations. To perform fine mapping of this QTL, we measured the basal root growth angle of crown roots at the seedling stage in seven BC₂F₃ recombinant lines grown in small cups in a greenhouse. The QTL was mapped between markers RM21941 and RM21976, which delimit an 812-kb interval in the reference cultivar Nipponbare. We have designated this QTL qSOR1 (quantitative trait locus for SOIL SURFACE ROOTING 1).     

Atmospheric CO2 and O3 alter competition for soil nitrogen in developing forests

Plant growth responses to rising atmospheric CO₂ and O₃ vary among genotypes and between species, which could plausibly influence the strength of competitive interactions for soil N. Ascribable to the size‐symmetric nature of belowground competition, we reasoned that differential growth responses to CO₂ and O₃ should shift as juvenile individuals mature, thereby altering competitive hierarchies and forest composition. In a 12‐year‐long forest FACE experiment, we used tracer ¹⁵N and whole‐plant N content to assess belowground competitive interactions among five Populus tremuloides genotypes, between a single P. tremuloides genotype and Betula papryrifera, as well as between the same single P. tremuloides genotype and Acer saccharum. Under elevated CO₂, the amount of soil N and ¹⁵N obtained by the P. tremuloides genotype common to each community was contingent on the nature of belowground competition. When this genotype competed with its congeners, it obtained equivalent amounts of soil N and tracer ¹⁵N under ambient and elevated CO₂; however, its acquisition of soil N under elevated CO₂ increased by a significant margin when grown in competition with B. papyrifera (+30%) and A. saccharum (+60%). In contrast, elevated O₃ had no effect on soil N and ¹⁵N acquisition by the P. tremuloides genotype common in each community, regardless of competitive interactions. Under elevated CO₂, the rank order of N acquisition among P. tremuloides genotypes shifted over time, indicating that growth responses to CO₂ change during ontogeny; this was not the case under elevated O₃. In the aspen‐birch community, the competitive advantage elevated CO₂ initially conveyed on birch diminished over time, whereas maple was a poor competitor for soil N in all regards. The extent to which elevated CO₂ and O₃ will shape the genetic structure and composition of future forests is, in part, contingent on the time‐dependent effects of belowground competition on plant growth response.