The complete mitochondrial genomes of the liver flukes Opisthorchis felineus and Clonorchis sinensis (Trematoda)

The complete mitochondrial genomes of the parasitic trematodes Opisthorchis felineus and Clonorchis sinensis (family Opisthorchiidae) were fully sequenced in order to develop markers for DNA diagnostics of the liver flukes infection, molecular ecology, population and phylogenetic studies. The complete sequences of mitochondrial genomes of these species comprise 14,277 and 13,875 bp, respectively, and are thus the shortest trematode mitochondrial genomes sequenced to date. The gene content and arrangement are identical to that of Fasciola hepatica. ATG and GTG are used as the start-codons and TAG and TAA are used as the stop-codons. The stop-codon TAG of the C. sinensis nad1 gene overlap by 1 nt with the downstream tRNA-Asn gene. Alternative structures for the Ser(UCN) tRNAs were found for both species. The noncoding control regions are separated into two parts by the tRNA-Gly gene and contain neither tandem repeats, which are characteristic for trematode control regions, nor secondary structures. In conclusion, the complete mitochondrial DNA sequences of O. felineus and C. sinensis will serve as a resource for comparative mitochondrial genomics and systematic studies of parasitic trematodes.     

Pathways of macroinvertebrate invasions in the Ob River basin (West Siberia)

Water bodies of West Siberia mainly belong to the Ob River basin, which is not connected to other basins by shipping canals. The relative isolation of the basin predetermined the major role of industrial fisheries and aquarium trade in alien invertebrate transfer into the basin reservoirs. About 60% of the alien species were introduced into water bodies of West Siberia through industrial fisheries, and about 40% through aquarium fisheries. This paper is the first attempt to supplement a list of alien aquatic invertebrates from the Ob River basin. The data on the spread of 21 known non-indigenous species of invertebrates in this area are available. It should be noted that 7 species were deliberately introduced to enhance food reserves for fish, 8 were released by aquarists, 5 were inadvertently released during fish and forage organism introduction, and 1 (a crayfish) was imported for human consumption. For species with a known establishment period, there was a prolonged lag time in cases of both intentional and inadvertent introduction. The high invasion rate in the relatively isolated water bodies of the Ob River basin is comparable to that in Europe; hence, establishment of control over fishery-induced movement of alien invertebrates is required.     

Comparative histopathology of Opisthorchis felineus and Opisthorchis viverrini in a hamster model: an implication of high pathogenicity of the European liver fluke

European liver fluke (Opisthorchis felineus) and Asian liver fluke (Opisthorchis viverrini) are similar in morphology but comparative pathology of the infections has not been described. We therefore did comparative histopathology of both parasites in an experimental animal model. The study was conducted in 3 groups of 105 Syrian golden hamsters; the first and second groups fed with 50 metacercariae of O. felineus (OF) or O. viverrini (OV) and the last group was uninfected controls. Five hamsters in each group were euthanized on weeks 1, 2, 4, 8, 12 and 24 post-infection. The liver tissue was fixed and processed for routine histopathology and immunohistochemistry for proliferation markers (BrdU or PCNA). Overall, the liver histopathology of O. felineus and O. viverrini infection was generally similar. However, various histopathogical features including intense inflammation, fibrosis, biliary and goblet cell hyperplasia and dysplasia occurred earlier in the OF group. In addition, the existence of precancerous lesions such as cholangiofibrosis in a long-term infection was observed only in this group. O. felineus is larger in size than O. viverrini which, together with its excreted and secreted antigens, likely is crucial in the induction of liver fluke induced disease. The differences in nature and timing of the histopathological profile indicate that opisthorchiasis caused by the European liver fluke O. felineus is more pathogenic than its Asian relative O. viverrini.     

Vegetation characteristics and eco-hydrological processes in a pristine mire in the Ob River valley (Western Siberia)

Relations between vegetation characteristics and eco-hydrological processes were assessed in a pristine mire in the valley of the Ob River (Western Siberia). Along a transect from the terrace scarp to the river, field data were collected on vegetation composition, peat stratigraphy, peat chemistry, hydrology and hydrochemistry. Based on floristic composition, eight vegetation communities were distinguished. Hydraulic head measurements were used to obtain an indication of groundwater flow directions. The water balance of the mire was calculated with a two-dimensional steady-state numerical groundwater model. Water types were defined based on cluster analysis of hydrochemical data. The results revealed that the dominant hydrological factor in the Ob mire is the discharge of groundwater, which supplies about threefold more water than net precipitation. Although the discharge flux decreases with increasing distance from the terrace scarp, high water levels and a “groundwater-like” mire water composition were observed in the major part of the study site. Precipitation and river water play only a minor role. Despite dilution of discharging groundwater with rainwater, spatial differences in pH and solute concentrations of the surficial mire water are small and not reflected in the vegetation composition. Although small amounts of silt and clay were found in the peat in the proximity of the river, indicating the occurrence of river floods in former times, no river-flood zone could be recognized based on hydrochemical characteristics or vegetation composition. A comparison of the Ob mire with well-studied and near-natural mires in the Biebrza River valley (Poland) revealed substantial differences in both vegetation characteristics and the intensity and spatial pattern of eco-hydrological processes. Differences in the origin and ratios of water fluxes as well as a dissimilar land use history would seem to be key factors explaining the differences observed.     

Earthworm (Oligochaeta,Lumbricidae) Populations of the Karasu River Basin (Central Caucasus)

The species composition, population structure, and synecological characteristics of earthworms inhabiting forest and meadow formations of unique beech–hornbeam woodland of the Karasu River basin have been studied. Thirteen Lumbricidae species were found. The species composition and earthworm population structure depend on phytocenosis edificators. The greatest diversity, namely, species, chorological, and ecological, was recorded in soils of relict beech phytocenosis. It was shown that in the case of forest clearing its earthworm’s fauna remains intact. In the secondary meadows, the following was noted: the lowest species diversity of Lumbricidae, domination of soil species proper, and dramatically increasing diversity indices compared to forest associations.     

Fauna of chironomids (Diptera,Chironomidae) of the Kama River Basin

An annotated list of chironomid species is presented for the watercourses and waterbodies of the Kama River Basin, which covers the territories of Perm krai, Sverdlov oblast’, Kirov oblast’, the Udmurt Republic, and the Republic of Bashkortostan. The list includes 253 species of 107 genera and 6 subfamilies: Podonominae (2 species), Tanypodinae (35), Diamesinae (10), Prodiamesinae (4), Orthocladiinae (92), and Chironominae (110). Eighty one of these species were defined under the imagoes.     

Selenium and mercury concentrations in some fish species of the Madeira River, Amazon Basin, Brazil

Samples of 7 species of piscivorous, omnivorous, and herbivorous fish caught at 12 different sites on the Madeira River, Amazon Basin, were analyzed for selenium and mercury. Selenium was determined by anodic stripping voltammetry and mercury by cold vapor atomic absorption spectrophotometry. The means for selenium concentrations ranged from 0.49 to 3.11 nmol/g and for mercury from 0.41 to 6.66 nmol/g depending on the fish species. The molar ratios of Hg:Se increased according to the fish trophic level. Piscivorous species had the highest mean ratio (4.0) and herbivorous species the lowest (0.9). There was a positive and statistically significant correlation between selenium and mercury concentrations for the herbivorous species (r = 0.716;p = 0.0088) not seen for omnivororus and piscivorous species (r = -0.2032;p = 0.3407). These findings are significant for the fish-eating population of the Madeira River because the ingestion of mercury would always be in excess of selenium.     

Pathology and first report of natural infections of the eye trematode Philophthalmus lachrymosus Braun, 1902 (Digenea, Philophthalmidae) in a non-human mammalian host

The avian eye trematode Philophthalmus lachrymosus Braun, 1902 is for the first time referred naturally occurring in a non-human mammalian host. Previously, natural infections with P. lachrymosus and other species of Philophthalmus have been occasionally reported from man, with few data on experimental infections of non-human mammals. Results presented here are related to the report of two cases of philophthalmosis due to natural infections of wild Brazilian capybaras, Hydrochaeris hydrochaeris L., 1766 with P. lachrymosus and associated pathology. Clinical signs, gross and microscopic lesions as well as new morphometric data on the parasite are presented.     

Amur sleeper (Perccottus glenii Dubowski, 1877) spreading in the Danube River Basin

Whereas earlier Amur sleeper (Perccottus glenii) findings in the Danube River were only single specimens, data reported in this study represent the first record on establishment of a local population. An overview of the spread of the Amur sleeper in the Danube River basin is also presented.     

Species affiliation of metacercaria of the genus Metorchis (Trematoda, Opisthorchidae) from fishes in Western Siberia

Two larval species of the genus Metorchis, M. bilis and M. xanthosomus, are reported from fishes of West Siberia. Larvae of the first species can develop into adult forms in birds (terns, gulls, ducks) and in mammals (cats, golden hamsters, white mice). Larvae of the second species developed only in ducks. Experimental infection of golden hamsters, white mice and black terns with M. xanthosomus failed. On the results of the experimental infection and literary data the synonyms, M. bilis and M. xanthosomus, are given.     

Possible Reason for the Expansion of Carassius auratus (Linnaeus, 1758) (Teleostei,Cyprinidae) in the Danube River Basin

The author found quite a close negative relationship between commercial catches of predatory fishes and of German carp (Carassius auratus) in the lower Danube. He supposes that the main reason for the population explosion and subsequent expansion of German carp in the Danube River basin seems to be a shift in the balance of the fish community due to a reduction in the density of predatory species.     

Cytogenetics of Dictyocaulus arnfieldi (Cobbod, 1884) Railliet and Henry, 1907

A cytogenetic study of Dictyocaulus arnfieldi was made for the first time. The diploid chromosome number was 2n = 11 for males and 2n = 12 for females; there was an XO/XX sex determinism mechanism. Diplotene stage showed bivalents with 3, 2 or 1 chiasmata. The possible differences in the evolution of D. arnfieldi and Dictyocaulus filaria are discussed.     

Light and electron microscopic investigation of Pelomyxa prima (Gruber, 1884) (Peloflagellatea, Pelobiontida)

Cell organization of a multinuclear pelobiont Pelomyxa prima has been studied at the light and electron microscopic levels. Motile individuals demonstrate a characteristic drop-like or pyriform shape and reach 550 microkm in length. The cell cover is represented by a well-developed, morphologically differentiated glycocalyx 80-100 nm thick. The cytoplasm contains many structural vacuoles. The nuclei are of vertical type, numbering up to several nuclei in large individuals. Numerous cytoplasmic microtubules are associated with the external membrane of the nuclear envelope. Separate non-motile flagella are distributed throughout the cell surface, being more numerous in the posterior body end and uroidal zone of the protist. Basal bodies of the flagella are extremely long, being deeply immersed into the cytoplasm. These bodies are surrounded by a muff of electron-dense material, with numerous microtubules radiating from it. A compact bundle of microtubules starts from the base of a basal body axially into the cytoplasm. Besides, a band-like lateral microtubular rootlet is present. The number of microtubules in the axoneme of undulipodia is unstable. Neither mitochondria, nor Golgi complex were found. Two species of bacterial endocytobionts are present in the cytoplasm in considerable numbers.     

Ordovician Ostracods from the Chunya River Basin (A Right Tributary of the Podkamennaya Tunguska River,Siberian Platform)

The ostracod assemblages of the Baksian and Dolborian horizons of the Chunya River basin (a right tributary of the Podkamennaya Tunguska River) have been studied. They add essentially the paleontological characteristics of Upper Ordovician deposits of the Siberian Platform. The age of deposits was verified and the studied sections were correlated with the Gaindinskaya 3 reference borehole. Two new genera and 9 new species were described. Images for known ostracod species are given.     

Investigations on origin and status of a Faxonius crayfish population in the upper James River Basin,Virginia

Freshwater crayfish are an ecologically important component of freshwater ecosystems. A combination of factors, including high levels of species diversity, endemism, and limited morphological divergence among species have created a situation where taxonomy, accurate geographic ranges, and species identifications are in flux. We used genetic data to investigate the origin and status of a species of Faxonius (Cambaridae) in the upper James and Roanoke rivers in western Virginia. Mitochondrial DNA sequence data suggests that this species, F. ozarkae, is native to streams in the Ozarks of Missouri and Arkansas, and has been introduced into Virginia recently. Details of the initial introduction are not known, but may plausibly be connected to commercial fish stocking.

     

Lice (Anoplura) of Small Mammals in the Middle Ob Region

Entomological Review - Lice (Anoplura) were studied in 2015–2018 in the middle taiga of West Siberia in the territory of the Middle Ob region (Khanty-Mansi Autonomous Okrug–Yugra). Lice...     

Seasonal variations in growth, condition and gonads of Dormitator latifrons (Richardson) in the Chone River Basin, Ecuador

Growth in length, condition, and gonads of a food fish, Dormitator latifrons , were studied in the Chone River basin, Ecuador, in 1981. The river was bordered by floodplains in the upstream freshwater zone, and by mangrove swamps and shrimp farms in the downstream estuarine zone. The climate was marked by wet (January to April) and dry (May to December) seasons. During the dry season, an earth dam in the river prevented movement of water and fish between upstream and downstream zones. At the end of the dry season, most of the upstream floodplains were dry, and the main fish refuges were in downstream areas in deep pools in the river upstream. During the floods, fish migrated from downstream areas towards upstream floodplains. Growth rates and condition increased when water levels were high or salinity was low and decreased when water levels were low or salinity was high. Seasonal changes in gonads and abundance of juveniles indicated that reproduction occurred during the floods, but there was some reproduction in the dry season. Reproduction occurred in upstream and downstream zones and appeared to be stimulated by a complex of factors, including water levels, currents and salinity. The yield in flood plain sites was estimated as c. 115 kg ha⁻¹ in 1981.