Pulse additions of soil carbon and nitrogen affect soil nitrogen dynamics in an arid Colorado Plateau shrubland

Biogeochemical cycles in arid and semi-arid ecosystems depend upon the ability of soil microbes to use pulses of resources. Brief periods of high activity generally occur after precipitation events that provide access to energy and nutrients (carbon and nitrogen) for soil organisms. To better understand pulse-driven dynamics of microbial soil nitrogen (N) cycling in an arid Colorado Plateau ecosystem, we simulated a pulsed addition of labile carbon (C) and N in the field under the canopies of the major plant species in plant interspaces. Soil microbial activity and N cycling responded positively to added C while NH₄⁺–N additions resulted in an accumulation of soil NO₃⁻. Increases in microbial activity were reflected in higher rates of respiration and N immobilization with C addition. When both C and N were added to soils, N losses via NH₃ volatilization decreased. There was no effect of soil C or N availability on microbial biomass N suggesting that the level of microbial activity (respiration) may be more important than population size (biomass) in controlling short-term dynamics of inorganic and labile organic N. The effects of C and N pulses on soil microbial function and pools of NH₄⁺–N and labile organic N were observed to last only for the duration of the moisture pulse created by treatment addition, while the effect on the NO₃⁻–N pool persisted after soils dried to pre-pulse moisture levels. We observed that increases in available C lead to greater ecosystem immobilization and retention of N in soil microbial biomass and also lowered rates of gaseous N loss. With the exception of trace gas N losses, the lack of interaction between available C and N on controlling N dynamics, and the subsequent reduction in plant available N with C addition has implications for the competitive relationships between plants species, plants and microbes, or both.     

Hydraulic redistribution of soil water in two old-growth coniferous forests: quantifying patterns and controls

Although hydraulic redistribution of soil water (HR) by roots is a widespread phenomenon, the processes governing spatial and temporal patterns of HR are not well understood. We incorporated soil/plant biophysical properties into a simple model based on Darcy's law to predict seasonal trajectories of HR. We investigated the spatial and temporal variability of HR across multiple years in two old-growth coniferous forest ecosystems with contrasting species and moisture regimes by measurement of soil water content (theta) and water potential (Psi) throughout the upper soil profile, root distribution and conductivity, and relevant climate variables. Large HR variability within sites (0-0.5 mm d(-1)) was attributed to spatial patterns of roots, soil moisture and depletion. HR accounted for 3-9% of estimated total site water depletion seasonally, peaking at 0.16 mm d(-1) (ponderosa pine; Pinus ponderosa) or 0.30 mm d(-1) (Douglas-fir; Pseudotsuga menziesii), then declining as modeled pathway conductance dropped with increasing root cavitation. While HR can vary tremendously within a site, among years and among ecosystems, this variability can be explained by natural variability in Psi gradients and seasonal courses of root conductivity.     

Plant and soil nitrogen dynamics in California annual grassland

Seasonal changes in soil water and nitrogen availability were related to the phenology and growth of plants in California annual grassland. Plant accumulation of nitrogen was mainly confined to two short periods of the year: fall and early spring. At these times, plants were in the vegetative growth phase, roots were growing rapidly and soil moisture was high. During these periods, soil nitrate was low or depleted. High flux of nitrogen in this ecosystem, however, is indicated by the rapid disappearance of the previous year's detrital material, high microbial biomass, and high mineralizable nitrogen and nitrification potential.At the end of the summer drought, significant amounts of the previous year's detrital material had disappeared, chloroform-labile N (expressed as microbial biomass N) was at its seasonal maximum, and soil inorganic nitrogen pools were high. This suggests inorganic nitrogen flux during the drought period. The drought escaper life history characteristics of annual grasses in California annual grassland, however, may prevent plants from utilizing available nitrogen during a large part of the year.     

Role of proteins in soil carbon and nitrogen storage: controls on persistence

Mechanisms of soil organic carbon (C) and nitrogen (N) stabilization are of great interest, due to the potential for increased CO₂ release from soil organic matter (SOM) to the atmosphere as a result of global warming, and because of the critical role of soil organic N in controlling plant productivity. Soil proteins are recognized increasingly as playing major roles in stabilization and destabilization of soil organic C and N. Two categories of proteins are proposed: detrital proteins that are released upon cell death and functional proteins that are actively released into the soil to fulfill specific functions. The latter include microbial surface-active proteins (e.g., hydrophobins, chaplins, SC15, glomalin), many of which have structures that promote their persistence in the soil, and extracellular enzymes, responsible for many decomposition and nutrient cycling transformations. Here we review information on the nature of soil proteins, particularly those of microbial origin, and on the factors that control protein persistence and turnover in the soil. We discuss first the intrinsic properties of the protein molecule that affect its stability, next possible extrinsic stabilizing influences that arise as the proteins interact with other soil constituents, and lastly controls on accessibility of proteins at coarser spatial scales involving microbial cells, clay particles, and soil aggregates. We conclude that research at the interface between soil science and microbial physiology will yield rapid advances in our understanding of soil proteins. We suggest as research priorities determining the relative abundance and turnover time (age) of microbial versus plant proteins and of functional microbial proteins, including surface-active compounds.     

Stocks and dynamics of SOC in relation to soil redistribution by water and tillage erosion

Soil organic carbon (SOC) displaced by soil erosion is the subject of much current research and the fundamental question, whether accelerated soil erosion is a source or sink of atmospheric CO₂, remains unresolved. A toposequence of terraced fields as well as a long slope was selected from hilly areas of the Sichuan Basin, China to determine effects of soil redistribution rates and processes on SOC stocks and dynamics. Soil samples for the determination of caesium‐137 (¹³⁷Cs), SOC, total N and soil particle size fractions were collected at 5 m intervals along a transect down the two toposequences. ¹³⁷Cs data showed that along the long slope transect soil erosion occurred in upper and middle slope positions and soil deposition appeared in the lower part of the slope. Along the terraced transect, soil was lost over the upper parts of the slopes and deposition occurred towards the downslope boundary on each terrace, resulting in very abrupt changes in soil redistribution over short distances either side of terrace boundaries that run parallel with the contour on the steep slopes. These data reflect a difference in erosion process; along the long slope transect, water erosion is the dominant process, while in the terraced landscape soil distribution is mainly the result of tillage erosion. SOC inventories (mass per unit area) show a similar pattern to the ¹³⁷Cs inventory, with relatively low SOC content in the erosional sites and high SOC content in depositional areas. However, in the terraced field landscape C/N ratios were highest in the depositional areas, while along the long slope transect, C/N ratios were highest in the erosional areas. When the samples are subdivided based on ¹³⁷Cs‐derived erosion and deposition data, it is found that the erosional areas have similar C/N ratios for both toposequences, while the C/N ratios in depositional areas are significantly different from each other. These differences are attributed to the difference in soil erosion processes; tillage erosion is mainly responsible for high‐SOC inventories at depositional positions on terraced fields, whereas water erosion plays a primary role in SOC storage at depositional positions on the long slope. These data support the theory that water erosion may cause a loss of SOC due to selective removal of the most labile fraction of SOC, while on the other hand tillage erosion only transports the soil over short distances with less effect on the total SOC stock.     

Using NCSWAP to simulate seasonal nitrogen dynamics in soil and corn

The objective of this study was to determine if a re-calibrated version of the computer model NCSWAP (version 36) could accurately predict corn growth and soil N dynamics in conventionally tilled (CT) and no-till (NT) corn supplied with legume green manure or ammonium nitrate as N sources. We also attempted to ascertain the reasons for limitations in the model's ability to simulate corn growth and soil N dynamics found by our colleagues in a previous study and to propose potential improvements. The model was calibrated to accurately simulate total available N (N in plant above-ground biomass plus soil nitrate in the 0 to 45 cm profile) for a control and a fertilizer CT treatment in the 1992 growing season. To do so, input values defining the quantities of active soil organic N had to be reduced to 19% of the values proposed by the model developers and a solute transport factor defining the mobile vs. immobile fractions of soil nitrate adjusted from 0.8 to 0.2. The discrepancies between the proposed values and the lower values employed in this study might be due to the uncertainties in quantitatively describing soil N mineralization processes and the way they are handled in the model, as well as the lack of a component simulating macroporous-influenced water flow and solute transport in the model. With the current version, until one knows how to predict what these values are, the model needs to be re-calibrated for each experimental site and condition and thus is of limited value as a general model.With no further adjustment of input values, model validation success was mixed. The model accurately predicted total available N for treatments in the second year of the experiment that had the same N source and tillage as the treatments used for the calibration year but with the different weather and growing conditions. However, total available N was underpredicted where legume green manure was the N source and overpredicted with no-till cultivation. The model was accurate in simulating seasonal corn growth for nearly all the treatments, judged by nonsignificant mean difference (MD) values and highly significant correlation coefficients (r). Prediction of seasonal soil nitrate concentration was less accurate compared to total available N and corn growth variables. Potential improvements in the model's simulation of a no-till system as well as for predicting corn harvest yield and seasonal soil nitrate concentration where N deficiency occurs were discussed.     

Assimilation dynamics of soil carbon and nitrogen by wheat roots and Collembola

It has been demonstrated that plant roots can take up small amounts of low-molecular weight (LMW) compounds from the surrounding soil. Root uptake of LMW compounds have been investigated by applying isotopically labelled sugars or amino acids but not labelled organic matter. We tested whether wheat roots took up LMW compounds released from dual-labelled (¹³C and ¹⁵N) green manure by analysing for excess ¹³C in roots. To estimate the fraction of green manure C that potentially was available for root uptake, excess ¹³C and ¹⁵N in the primary decomposers was estimated by analysing soil dwelling Collembola that primarily feed on fungi or microfauna. The experimental setup consisted of soil microcosm with wheat and dual-labelled green manure additions. Plant growth, plant N and recoveries of ¹³C and ¹⁵N in soil, roots, shoots and Collembola were measured at 27, 56 and 84 days. We found a small (<1%) but significant uptake of green manure derived ¹³C in roots at the first but not the two last samplings. About 50% of green manure C was not recovered from the soil-plant system at 27 days and additional 8% was not recovered at 84 days. Up to 23% of C in collembolans derived from the green manure at 56 days (the 27 days sampling was lost). Using a linear mixing model we estimated that roots or root effluxes provided the main C source for collembolans (54−79%). We conclude that there is no solid support for claiming that roots assimilated green manure derived C due to very small or no recoveries of excess ¹³C in wheat roots. During the incubation the pool of green manure derived C available for root uptake decreased due to decomposition. However, the isotopic composition in Collembola indicated that there was a considerable fraction of green manure derived C in the decomposer system at 56 days thus supporting the premise that LMW compounds containing C from the green manure was released throughout the incubation. Responsible Editor: A. C. Borstlap.     

Effect of infiltration rate on nitrogen dynamics in paddy soil after high-load nitrogen application containing N tracer

Flooded paddy fields perform many ecological and conservation functions and are also reported to facilitate livestock waste disposal. Paddy field infiltration rates are important for nitrogen dynamics. A laboratory study was conducted to compare the effects of infiltration rate on nitrogen dynamics including nitrogen leaching, soil adsorption, microorganism assimilation, plant uptake and denitrification. Two infiltration rates were applied to paddy soil: 18.6 ± 10.3 mm d⁻¹ (High Infiltration Columns: HIC) and 4.49 ± 3.15 mm d⁻¹ (Low Infiltration Columns: LIC). Total nitrogen load was 484 kg-N ha⁻¹, with the ammonium ion form including basal fertilizer and a double supplemental fertilizer application. A (¹⁵NH₄)₂SO₄ tracer was applied in each infiltration rate as supplemental fertilizer.Nitrification and denitrification, plant uptake, soil adsorption, and leaching differed between infiltration rates. Compared with high nitrate concentration in HIC soil water, little nitrate appeared in the LIC, and it maintained relatively higher soil water ammonium concentrations long after application. The ¹⁵N assimilated by rice and contained in the LIC soil was higher than in the HIC, suggesting that low infiltration is beneficial to nitrogen assimilation, adsorption and fixation. Although loss of nitrogen via leaching was higher in the HIC than the LIC, it accounted for only 3.94% of total ¹⁵N input. About 69.4% of total ¹⁵N input was unaccounted for in the HIC, whereas 38.3% of total ¹⁵N input was unaccounted for in the LIC. According to the denitrification rate calculated from changes in ²⁹N₂/²⁸N₂ and ³⁰N₂/²⁸N₂ ratios, the denitrification rate after HIC application was higher than the LIC, reaching a maximum rate of 2.9 g m⁻² d⁻¹. This suggests that high infiltration rate enhances nitrification and denitrification, with most of the unaccounted inputted ¹⁵N in the HIC was probably lost through nitrification and denitrification.     

外源无机氮素形态对土壤氨基糖动态的影响

微生物生长对底物的可利用性存在不同的响应,外源氮素的形态可以显著影响微生物代谢过程,而土壤氨基糖作为微生物细胞壁残留物,其形成、分解和周转特征与外源碳氮供给密切相关,对土壤氨基糖的研究与同位素标记技术相结合,可以进一步反映微生物对底物的利用特征.本文以葡萄糖及15N标记的NH4+和NO3-为底物,利用气相色谱-质谱联机技术,通过测定氨基糖中同位素富集比例,跟踪新形成(标记)和原有(非标记)的土壤氨基糖的动态变化.结果表明:在培养过程中,15N标记的氨基糖含量显著增加,NH4+向氨基糖的转化显著高于NO3-,反映出微生物对NH4+的选择性利用.土壤中原有的氨基糖也发生了不同变化.其中,非标记氨基葡萄糖在N H4+为底物时,其含量有所增加,但在NO3-为底物时含量逐渐下降;非标记胞壁酸含量在2个处理中均不断下降,尤其以NO3-为底物时更为显著;非标记氨基半乳糖含量的增减幅度均小于20％.这种特异性变化表明,不同来源的微生物细胞壁残留物对土壤氮素周转和稳定的作用不同,真菌细胞壁残留物易于在土壤中积累,有利于土壤有机质的稳定,而细菌细胞壁残留物容易分解,在土壤有机质周转过程中起重要作用.     

Combined climate factors alleviate changes in gross soil nitrogen dynamics in heathlands

The ongoing climate change affects biogeochemical cycling in terrestrial ecosystems, but the magnitude and direction of this impact is yet unclear. To shed further light on the climate change impact, we investigated alterations in the soil nitrogen (N) cycling in a Danish heathland after 5 years of exposure to three climate change factors, i.e. warming, elevated CO₂ (eCO₂) and summer drought, applied both in isolation and in combination. By conducting laboratory ¹⁵N tracing experiments we show that warming increased both gross N mineralization and nitrification rates. In contrast, gross nitrification was decreased by eCO₂, an effect that was more pronounced when eCO₂ was combined with warming and drought. Moreover, there was an interactive effect between the warming and CO₂ treatment, especially for N mineralization: rates increased at warming alone but decreased at warming combined with eCO₂. In the full treatment combination, simulating the predicted climate for the year 2075, gross N transformations were only moderately affected compared to control, suggesting a minor alteration of the N cycle due to climate change. Overall, our study confirms the importance of multifactorial field experiments for a better understanding of N cycling in a changing climate, which is a prerequisite for more reliable model predictions of ecosystems responses to climate change.     

Intraspecific litter diversity and nitrogen deposition affect nutrient dynamics and soil respiration

Anthropogenic forces are concurrently reducing biodiversity and altering terrestrial nutrient cycles. As natural populations decline, genetic diversity within single species also declines. The consequences of intraspecific genetic loss for ecosystem functions are poorly understood, and interactions among intraspecific diversity, nitrogen deposition, and nutrient cycling are unknown. We present results from an experiment that simulated both a decline in biodiversity and an increase in nitrogen deposition. In soil microcosms, we tested effects of variation in intraspecific litter diversity and nitrogen deposition on soil respiration and nitrogen leaching. Increases in intraspecific litter diversity increased soil respiration overall, with the greatest increases in respiration occurring under high nitrogen deposition. Nitrogen deposition increased the amount of inorganic nitrogen leached, while the amount of dissolved organic nitrogen leached was correlated with initial litter chemistry (lignin concentration) and remained independent of litter diversity and nitrogen deposition treatments. Our results demonstrate the potential for losses in genetic diversity to interact with other global environmental changes to influence terrestrial nutrient cycles.     

Effects of soil extracts from repeated plantation woodland of Chinese-fir on microbial activities and soil nitrogen mineralization dynamics

Effects of soil extracts from repeated plantation woodlands of Chinese-fir on soil fungi growth, the activities of microbial communities, and rates of net soil nitrogen mineralization were investigated. Soil extracts from replanted woodlands significantly inhibited soil non-pathogenic fungi growth, reduced soil respiration activities, and net soil nitrogen mineralization rates. However, soil extracts from replanted woodland increased the growth of pathogenic fungi. The combination of soil extracts and pathogenic fungi did not significantly reduce the growth of Chinese-fir seedlings when compared to the soil extracts alone. The combination of soil extracts with pathogenic and non-pathogenic fungi significantly increased the growth of Chinese-fir seedlings when compared to the combination of soil extracts and pathogenic fungi. The results suggest that the allelochemicals from soil extracts, rather than pathogenic fungi, are the key factor regulating the productivity and nitrogen cycling in repeated plantation woodlands.     

Effects of soil pH and nitrogen fertility on the population dynamics of Thielaviopsis basicola

Black root rot of tobacco, caused by Thielaviopsis basicola, is generally severe at soil pH values >5.6 and suppressed under more acidic conditions (pH < 5.2). Soil acidifying fertilizers containing NH₄–N are generally recommended for burley tobacco production in North Carolina, but the effects of N form and application rate on development of black root rot and on the population dynamics of T. basicola have not been determined. Greenhouse and laboratory studies were conducted to evaluate the effects of N form (NH₄ ⁺ or NO₃ ^–) and rate on pathogen and disease parameters at several initial soil pH levels. A moderately-conducive field soil, initial pH 4.7, was adjusted to a pH of 5.5 or 6.5 by the addition of CaOH₂, then amended with the desired nitrogen form and rate. Pathogen populations were determined over time. In addition, spore production in extracts of roots from plants grown in the various nitrogen and pH treatments was determined. Finally, because tobacco responds to acidic soil conditions and exposure to NH₄–N by accumulating high concentrations of the polyamine putrescine, the toxicity of putrescine on vegetative growth and reproduction of T. basicola was investigated. Low soil pH and high levels of NH₄–N suppressed reproduction of T. basicola in soil and in root extract, while use of NO₃–N and depletion of NH₄–N resulted in rapid increases in populations of T. basicola. At 20 mM, putrescine inhibited hyphal growth by 60% and aleuriospore production by 98%. Fertilizers that reduced soil pH also reduced reproduction by T. basicola, and thus have potential for management of black root rot by suppressing populations of T. basicola over multiple years of crop production. The suppression of T. basicola and black root rot observed with NH₄–N amendments may partially be due to development of an inhibitory environment in the root and not solely to changes in rhizosphere pH.     

Available soil nitrogen in relation to fractions of soil nitrogen and other soil properties

The available N of 27 soils from England and Wales was assessed from the amounts of N taken up over a 6-month period by perennial ryegrass grown in pots under uniform environmental conditions. Relationships between availability and the distribution of soil N amongst various fractions were then examined using multiple regression. The relationship: available soil N (mg kg^–1 dry soil)=(N_min×0.672)+(N_inc×0.840)+(N_mom×0.227)–5.12 was found to account for 91% of the variance in available soil N, where N_min=mineral N, N_inc=N mineralized on incubation and N_mom=N in macro-organic matter. The N mineralized on incubation appeared to be derived largely from sources other than the macro-organic matter because these two fractions were poorly correlated. When availability was expressed in terms of available organic N as % of soil organic N (N_ao) the closest relationship with other soil characteristics was: N_ao=[N_inc×(1.395–0.0347×CN_mom]+[N_mom×0.1416], where CN_mom=CN ratio of the macro-organic matter. This relationship accounted for 81% of the variance in the availability of the soil organic N.The conclusion that the macro-organic matter may contribute substantially to the available N was confirmed by a subsidiary experiment in which the macro-organic fraction was separated from about 20 kg of a grassland soil. The uptake of N by ryegrass was then assessed on two subsamples of this soil, one without the macro-organic matter and the other with this fraction returned: uptake was appreciably increased by the macro-organic matter.     

Biological soil crusts increase the resistance of soil nitrogen dynamics to changes in temperatures in a semi-arid ecosystem

Aims

Biological soil crusts (BSCs), composed of mosses, lichens, liverworts and cyanobacteria, are a key component of arid and semi-arid ecosystems worldwide, and play key roles modulating several aspects of the nitrogen (N) cycle, such as N fixation and mineralization. While the performance of its constituent organisms largely depends on moisture and rainfall conditions, the influence of these environmental factors on N transformations under BSC soils has not been evaluated before.

Methods

The study was done using soils collected from areas devoid of vascular plants with and without lichen-dominated BSCs from a semi-arid Stipa tenacissima grassland. Soil samples were incubated under different temperature (T) and soil water content (SWC) conditions, and changes in microbial biomass-N, dissolved organic nitrogen (DON), amino acids, ammonium, nitrate and both inorganic N were monitored. To evaluate how BSCs modulate the resistance of the soil to changes in T and SWC, we estimated the Orwin and Wardle Resistance index.

Results

The different variables studied were more affected by changes in T than by variations in SWC at both BSC-dominated and bare ground soils. However, under BSCs, a change in the dominance of N processes from a net nitrification to a net ammonification was observed at the highest SWC, regardless of T.

Conclusions

Our results suggest that the N cycle is more resistant to changes in T in BSC-dominated than in bare ground areas. They also indicate that BSCs could play a key role in minimizing the likely impacts of climate change on the dynamics of N in semi-arid environments, given the prevalence and cover of these organisms worldwide.     

Effects of nitrogen application rate and topdressing times on yield and quality of Chinese cabbage and soil nitrogen dynamics

A good understanding of the relationship between vegetable quality and soil N balance is very important for proper nitrogen (N) management for crop productions. In this study, a field experiment was carried out to investigate the N application rate and times on Chinese cabbage yield and quality, N use efficiency, soil nitrate-N concentration, and soil pH. The experiment was implemented in a two-way factorial design and the two factors comprises of number of N applications (once, twice and three times, denoted as T1, T2 and T3) and N rates (15%, 30% and 45% less than conventional rates (CF), denoted as F1, F2 and F3, respectively). The treatments were also compared with a no-fertilizer blank and a control (CF) with a conventional N management practice. The results showed that the highest yield of cabbage (164.65 t hm^?2), Vitamine C content (14.80 g 100 g^?1 fresh mass), soluble sugar content (2.33 mg kg^?1), plant N uptake (119.2 kg hm^?2) were obtained under T3F1 treatment. Compared with CF treatment, T3F1 treatment significantly increased vegetable yield, vitamin C and soluble sugar content in fruit, and nitrogen use efficiency by 10.97%, 13.76% and 17.68%, and 18.76%, respectively. Nitrate-N content in cabbage was reduced by 7.55% in T3F1 treatment. With the reduced N application rate, soil pH gradually changed from 6.25 to 7.26. T3F1 treatment is a most suitable N management practice for vegetable production, in terms of higher vegetable yield and quality, soil N content, depressed soil acidification and nutrient uptake by Chinese cabbage.     

Fine-root dynamics in sugi (Cryptomeria japonica) under manipulated soil nitrogen conditions

Aims

Nitrogen deposition affect fine-root dynamics, a key factor in forest carbon and nutrient dynamics. This study aimed to elucidate the effects of increased soil inorganic nitrogen (N) levels on the fine-root dynamics of Cryptomeria japonica, which is tolerant to excess N load.

Methods

An ammonium nitrate solution (28 kg ha^?1 month^?1) was applied for 3 years to plots (1 m?×?2 m) in a C. japonica plantation. The elongation and disappearance of the fine roots were examined using the minirhizotron technique.

Results

The N fertilization increased soil inorganic N content and lowered the soil pH. Fine-root elongation rates increased with fertilization, whereas patterns of their seasonal changes were not affected. The ratio of cumulative disappearance to cumulative elongation of fine roots was lower in the N-fertilized plots than in the control plots. The mean diameter of the fine roots was not affected by N fertilization.

Conclusions

Our results suggest that C. japonica can respond to increased levels of soil inorganic N by increasing both the production and residence time of the fine roots. However, the effects of the changing soil N content are less evident for the phenology and morphology of the fine roots in C. japonica.