First record of the larval parasitic nematode Rhabditis orbitalis from Japanese wood mice (Apodemus spp.)

Parasitic larvae of Rhabditis orbitalis (formerly confused with Pelodera strongyloides) were found in the conjunctival sacs of the eyes of Apodemus argenteus and A. speciosus from Japanese islands.     

Competition and extinction: the mice of Foula, with notes on those of Fair Isle and St Kilda

House mice ( Mus rnusculus muralis ) on St Kilda became extinct within about 18 months of the human population leaving the island in 1930. Although it was argued at the time that they died out because they were unable to find enough food, house mice flourish on a number of uninhabited islands and it seems more probable that they could not successfully compete with the Long-tailed field mouse ( Apodemus sylvaticus ) in the absence of man.
A study of the distribution and diet of both house and field mice on the Shetland islands of Foula and Fair Isle shows that the house mouse populations tend to be centred on human dwellings, although both species were found apparently living together on Foula away from habitation. The natural history of the two species is reviewed, and it is concluded that the breeding of the house mouse is the most probable characteristic to be upset by disturbance, and that the disappearance of man on St Kilda allowed Apodemus to enter a habitat previously occupied almost exclusively by Mus .     

Differential geographic patterns of mitochondrial DNA variation in two sympatric species of Japanese wood mice, Apodemus speciosus and A. argenteus

We examined the gene sequences of mitochondrial cytochrome b (cyt b) in two Japanese wood mouse species, Apodemus speciosus (n = 89) and A. argenteus (n = 46), which are distributed on the four main islands of Japan (Hokkaido, Honshu, Shikoku, and Kyushu) and on the small islands surrounding them. Apodemus speciosus, the larger of the two species, showed substantial genetic variation, with a maximum of 3% sequence divergence, and remarkable phylogenetic subdivision with two major clades. One clade represents haplotypes from a central region, including Honshu, Shikoku, Kyushu, and their adjacent islands; the other clade includes haplotypes from Hokkaido and the peripheral islands, forming four subclades: a) Hokkaido, b) Sado Island, c) Satsunan Islands, and d) the Izu Islands. Sequence divergence among the four subclades was 1.0 to 1.5%, implying that A. speciosus colonized these geographic regions 0.2 to 0.3 million years ago, assuming a substitution rate of 2.4% per million years. The population on the Izu Islands has preserved haplotypes that are distinct from those in any other region, providing good evidence for the natural colonization of the volcanic islands of the Izu Islands. The cyt b sequence variation had no relation to the karyotypic dimorphism for the eastern (2n = 48) and western (2n = 46) geographic groups, between which a strict border exists at central Honshu. On the other hand, Apodemus argenteus, the smaller of the two species, showed a similar level of sequence divergence (maximum of 3%) but no substantial geographic differentiation: populations in Hokkaido, Sado, and Yakushima shared similar haplotypes with each of the central populations, suggesting that genetic exchanges occurred among the localities in the last 0.15 million years. The apparent genetic structure of the mitochondrial DNA found in the A. speciosus population might be caused solely by long-term existence in insular regions, presumably due to ecological superiority relative to A. argenteus.     

Eimerians from different karyotypes of the Japanese wood mouse (Apodemus spp.), with descriptions of two new species and a redescription of Eimeria montgomeryae Lewis and Ball, 1983

Examination of 131 wood mice (Apodemus spp.) representing 2 species and 6 subspecies collected from the Japanese islands of Hokkaido, Honshu, Kyushu, and Tsushima showed that 70 mice (53%) had coccidian oocysts in their feces. These included 21 of 42 (50%) Apodemus argenteus argenteus; 7 of 14 (50%) Apodemus argenteus hokkaidi; 2 of 3 (67%) Apodemus argenteus sagax; 3 of 9 (33%) Apodemus speciosus ainu; 36 of 61 (59%) Apodemus speciosus speciosus; and 1 of 2 (50%) Apodemus speciosus tusimaensis. Four distinct coccidians were identified: Eimeria argenteus n. sp. from A. a. argenteus, A. a. hokkaidi, A. a. sagax, and A. s. speciosus; Eimeria inuyamensis n. sp. from A. a. argenteus, A. s. speciosus, and A. s. tusimaensis; Eimeria montgomeryae Lewis and Ball, 1983, from A. a. argenteus, A. a. hokkaidi, A. a. sagax, A. s. ainu, and A. s. speciosus; and Eimeria uptoni Lewis and Ball, 1983, from A. a. argenteus, A. a. hokkaidi, and A. s. speciosus. Standard karyotypes were prepared from selected specimens of each host subspecies. All 3 subspecies of A. argenteus and A. s. tusimaensis have a 2n = 46; A. s. ainu, from Hokkaido, has a 2n = 48; and A. s. speciosus has at least 2 chromosomal races, 1 on northern (2n = 48) and 1 on southern (2n = 46) Honshu. Both chromosomal races of A. s. speciosus, as well as the other subspecies of Apodemus examined, shared their coccidian parasites freely.     

Chance and change in British Long-tailed field mice: (Apodemus sylvaticus)

The Long-tailed field mouse ( Apodemus sylvaticus (L.)) has undergone a marked degree of racial differentiation on the islands of the north-west Atlantic (Iceland, Shetland, and the Hebrides). The differences have arisen as a result of the colonization of these islands after the Pleistocene by small numbers of animals carrying alleles in different proportions to those in the parental population. In contrast, the populations on some islands to the south of Britain (Jersey and Guernsey in the Channel Isles, and St. Mary's in the Isles of Scilly) are similar to A. sylvaticus from the mainland of Britain, and are likely to represent the descendants of mice which survived the Ice Ages ( A. sylvaticus populations on the smaller islands–Alderney, Sark, Herm and Tresco–differ markedly from their closest relatives, and probably represent the results of recolonization following extinction in the same way as on the glaciated islands to the north).
On the mainland of Britain there is a fairly clear distinction between two groups: western and central populations, and eastern ones (which have closer affinities to French mice than western British ones). It is suggested that the two mainland British "races" may have diverged in Pleistocene refuges. Since no pelage or size genes are involved in the divergence, it would not be expected that they would be taxonomically distinct.
The data on which these conclusions are based derive from the incidence of 20 nonmetrical variants in the skulls of 1096 mice from 22 series.     

A trend of central versus peripheral structuring in mitochondrial and nuclear gene sequences of the Japanese wood mouse, Apodemus speciosus

A phylogeographic analysis was performed on Japanese endemic wood mice (Apodemus speciosus) using nuclear interphotoreceptor retinol binding protein (IRBP) gene sequences (1,152 bp), together with previously published mitochondrial cytochrome b (cyt b) data. In the IRBP analysis, 40 haplotypes were recovered from 84 individuals by statistical and subcloning methods. Substantial sequence variation was determined from the IRBP data (pi=0.0047), and no significant evidence of recombination was detected. From the phylogenetic analysis, the 40 haplotypes fell into two major groups with geographic associations, irrespective of the karyotype groups (2n=46 and 2n=48), yielding a trend of central (Hokkaido, Honshu, Shikoku, Kyushu, and Sado) and peripheral (Izu, Oki, Tsushima, and Satsunan Is.) groupings. This geographic pattern is similar to that observed in the cyt b data, with a different insular grouping of Sado, Hokkaido, Izu, and Satsunan islands, and also to that of morphological features. In both gene data sets, nested clade analyses revealed allopatric fragmentation in the "peripheral island clades" and range expansion in the "central island clades." A mismatch analysis using cyt b data also suggested expansion of the central islands clade. Thus, the trend of central vs. peripheral structuring may be attributable to past demographic dynamics in the two distinct haplotype clades, such as range expansion of one clade in the central area of the Japanese Islands, leaving the other clade in the periphery.     

Morphological and genetic variability in small island populations of the striped field mouse <Emphasis Type="Italic">Apodemus agrarius</Emphasis> Pallas, 1771

Morphological (craniometrical characteristics and variations of cusp t3 on the second upper molar (M²)) and genetic (polymorphism of chromosomes and blood proteins) variability was analyzed in small island populations of the striped field mouse Apodemus agrarius Pallas, 1771 from the Peter the Great Bay (Sea of Japan). It was found that the absence of t3 on M² is not a specific trait for A. agrarius. It was demonstrated that the population of field mice on the Bolshoy Pelis Island significantly differs from the populations from other islands and from the mainland according to the craniometrical parameters, teeth phenes, and variants of blood transferrin. The possible age of establishment of the island populations of the striped field mouse is discussed.     

Density compensation in island avifaunas

Summary This paper analyzes factors which determine the extent of density compensation on islands; i.e., is the summed population density of all species on an island equal to the summed mainland density? A graphical analysis allows quantitative comparisons of density compensation studies. Two hypotheses which are generally applicable predict the extent of density compensation on islands: (1) Niche theory predicts that summed population densities should be low if island species number is low. (2) The habitat appropriateness hypothesis predicts that summed population densities should be low if island populations occupy unfamiliar habitat. Both hypotheses successfully explain variability in the extent of density compensation on islands. Relative to the mainland, summed population densities on islands are high when islands support a large number of species and those species occupy familiar habitats. Summed population densities on islands are low when islands support few species and those species occupy novel habitats.     

What Do Pneumocystis Organisms Tell Us about the Phylogeography of Their Hosts? The Case of the Woodmouse Apodemus sylvaticus in Continental Europe and Western Mediterranean Islands

Pneumocystis fungi represent a highly diversified biological group with numerous species, which display a strong host-specificity suggesting a long co-speciation process. In the present study, the presence and genetic diversity of Pneumocystis organisms was investigated in 203 lung samples from woodmice (Apodemus sylvaticus) collected on western continental Europe and Mediterranean islands. The presence of Pneumocystis DNA was assessed by nested PCR at both large and small mitochondrial subunit (mtLSU and mtSSU) rRNA loci. Direct sequencing of nested PCR products demonstrated a very high variability among woodmouse-derived Pneumocystis organisms with a total number of 30 distinct combined mtLSU and mtSSU sequence types. However, the genetic divergence among these sequence types was very low (up to 3.87%) and the presence of several Pneumocystis species within Apodemus sylvaticus was considered unlikely. The analysis of the genetic structure of woodmouse-derived Pneumocystis revealed two distinct groups. The first one comprised Pneumocystis from woodmice collected in continental Spain, France and Balearic islands. The second one included Pneumocystis from woodmice collected in continental Italy, Corsica and Sicily. These two genetic groups were in accordance with the two lineages currently described within the host species Apodemus sylvaticus. Pneumocystis organisms are emerging as powerful tools for phylogeographic studies in mammals.     

Evolution of restriction sites of ribosomal DNA in natural populations of the field mouse,Apodemus speciosus

An analysis by restriction endonuclease digestion of ribosomal DNA (rDNA) was carried out in natural populations of Apodemus speciosus, a field mouse that is endemic to Japan. Two restriction sites, the EcoRI (E3) and DraI (D4) sites, in the nontranscribed spacer region downstream from the gene for 28S RNA showed polymorphism within and between individuals in the populations from the Japanese main islands. By contrast, populations from the small adjoining islands which are thought to have separated from the main islands 1–2 × 10⁴ years ago showed relatively low levels of polymorphism within and between individuals, i.e., one of the polymorphic bands in the case of each enzyme was predominant in these populations, irrespective of the variants. These results indicate that the rate of fixation of site variations depends on population size and that the direction of fixation is random. Furthermore, each polymorphic restriction site seems to be fixed independently.Correspondence to: H. Suzuki     

A phylogenetic study of the genus Apodemus by sequencing the mitochondrial DNA control region

The sequences of the mitochondrial DNA control region (D-loop) and flanking tRNA genes (about 1000 bp) of 20 samples of wood mice (genus Apodemus ) were analyzed in order to clarify the relationships between different species belonging to the genus. The phylogenetic trees obtained using different methods showed similar topologies with distinct Karstomys ( Apodemus epimelas and Apodemus mystacinus ) and Sylvaemus ( Apodemus alpicola , Apodemus flavicollis , Apodemus hermonensis , Apodemus sylvaticus and Apodemus uralensis ) subtrees. Within Sylvaemus all species appeared to be closely related to each other, probably as result of a bush-like radiation event. Nevertheless, A. hermonensis seemed to be the first diverging branch followed by A. sylvaticus ; A. alpicola and A. flavicollis appeared to be very closely related. Three individuals of uncertain taxonomical status were included in the analysis: hypotheses as to their status are discussed. Further phylogenetic analysis was carried out combining the D-loop sequences of part of the samples of certain taxonomical status with 12S rRNA and cytochrome b sequences obtained by other researchers. Furthermore, I present a structure analysis of the D-loop in Apodemus as compared other rodent species.     

The delayed quinacrine mustard fluorescence from the C-blocks of Apodemus argenteus is due to the introduction of nicks into the DNA

"Delayed QM-fluorescence" refers to the unusual kinetics of fluorescence from most of the C-heterochromatic regions of the chromosomes of the small Japanese field mouse Apodemus argenteus. When stained with quinacrine mustard (QM-stained), these C-heterochromatic regions emit weak fluorescence immediately after exposure to blue light (BL); they emit bright fluorescence within a few minutes; and the intensity of the fluorescence gradually decreases after maximum fluorescence has been recorded. To elucidate the mechanism of this phenomenon, we used acridine orange staining (AO-staining) and a modified version of the in situ nick-translation method. Focusing on the large C-heterochromatic region (C-block) of the X chromosome, we noted that AO-stained C-blocks emitted greenish fluorescence, while QM-stained and BL-exposed (QM-BL-processed) C-blocks emitted reddish fluorescence upon AO-staining after removal of QM. These findings suggested that the C-block DNA of A. argenteus might undergo a structural change, such as strand breaks, during QM-BL processing. Application of the modified in situ nick-translation method revealed the generation of an appreciable number of nicks in the C-block DNA by QM-BL processing. No such nick formation was observed in the C-blocks of three other mammalian species: Apodemus peninsulae, Microtus montebelli, and Urotrichus talpoides. Our findings support the hypothesis that nick formation due to exposure to BL might play a primary role in inducing delayed QM-fluorescence in the C-blocks of A. argenteus. On the basis of the present and earlier findings, we propose a probable mechanism for delayed QM-fluorescence in A. argenteus chromosomes.     

中国姬鼠属的系统学研究述评

姬鼠属分布在欧亚大陆及其邻近的岛屿上, 种类及数量均较多。但对该属的分类和系统发育关系一直存在争议, 尤其近几年对姬鼠属分子系统学的研究, 产生了一些与形态学、生物地理学等研究不同的结果。文章综述了姬鼠属系统学研究的一些工作, 根据所归纳的初步论点, 试拟定了中国现生种类的系谱; 并对中国姬鼠属系统学的进一步研究, 提出了一些建议。     

Small mammals and their ectoparasites from the Scottish islands of Handa (Sutherland), Muck, Pabay, Scalpay and Soay (Inner Hebrides)

Small mammals were trapped on five islands for short periods during the summers of 1964 and 1965, with the following results:
Handa: Rattus norvegicus only, probably no other species present.
Muck: Sorex araneus, S. minutus, Apodemus sylvaticus and Microtus agrestis; R. norvegicus also present.
Pabay: S. minutus and Neomys fodiens ; probably no other species present.
Scalpay: S. araneus, S. minutus and M. agrestis.
Soay: S. araneus and S. minutus ; rodents almost certainly absent.
Ectoparasites (fleas and Acarina) collected from these small mammals are tabulated.     

On the insularity of islands

We propose that islands arc "less insular" than is generally perceived. This belief results, in part, from the paucity of studies on vagrant species that exploit islands but are not permanent residents with continual breeding populations. We show, via aneedotal evidence extracted from the literature and data acquired ON Gulf of California islands, that visitors to insular systems are fairly common. We delineate three types of events beyond the bounds of current biogeographical analysis that make islands less insular: I) migrants and "accidental" visitors. 2) individuals of a species whose foraging areas encompass many islands or the mainland and islands, and 3) species who "colonize" islands during opportune periods or years but become extinct during difficult times (source-sink situations). Such events potentially significantly affect the ecology and evolution of island inhabitants by such means as increased predation and/or competition, transport of parasites and pathogens, dispersal of seeds and eggs, and genetic introgression and hybridization. Discussion of other "insular" habitats such as freshwater lakes and wildlife refuges illustrate that vagrancy events may be nearly ubiquitous. Studies addressing the frequency and ecological and evolutionary significance of vagrants are required, especially in light of recent and rapid extinctions on islands and the increasing fragmentation of habitats.     

The Role of Small Islands in Marine Subsistence Strategies: Case Studies from the Caribbean

Caribbean archaeologists have tended to focus exclusively on the prehistory of the largest islands, perhaps because large islands are believed to provide the landmass necessary to support long-term population growth and cultural development. Yet, as research here and elsewhere, e.g., the Pacific, is showing, small islands provided access to resources and landscapes that were not always readily available on the larger islands. Small islands often have superior terrestrial and, especially, marine resources; isolated ritual spaces; and more easily defended locations; although they are susceptible to more rapid overexploitation. This paper examines in detail human needs with regard to island size, demonstrating that small islands were crucial in the development of pre-Columbian Caribbean societies. Four case studies are presented to illustrate that small islands often were preferred over large islands throughout the Caribbean archipelagoes. Finally, these studies show that the prehistoric exploitation and overexploitation of small islands can provide significant insights for establishing baselines that can be used for modern management and conservation efforts.

Phylogeny of the genus Apodemus with a special emphasis on the subgenus Sylvaemus using the nuclear IRBP gene and two mitochondrial markers: cytochrome b and 12S rRNA

Phylogenetic relationships among 17 extant species of Murinae, with special reference to the genus Apodemus, were investigated using sequence data from the nuclear protein-coding gene IRBP (15 species) and the two mitochondrial genes cytochrome b and 12S rRNA (17 species). The analysis of the three genes does not resolve the relationships between Mus, Apodemus, and Rattus but separates Micromys from these three genera. The analysis of the two mitochondrial regions supported an association between Apodemus and Tokudaia and indicated that these two genera are more closely related to Mus than to Rattus or Micromys. Within Apodemus, the mitochondrial data sets indicated that 8 of the 9 species analyzed can be sorted into two main groups: an Apodemus group, with A. agrarius, semotus, and peninsulae, and a Sylvaemus group, with uralensis, flavicollis, alpicola, sylvaticus, and hermonensis. The position of Apodemus mystacinus is ambiguous and might be either included in Sylvaemus or considered a distinct subgenus, Karstomys, more closely related to Sylvaemus than to Apodemus. Estimation of the divergence time for these taxa suggests a separation between 7 and 8 My ago for the three groups (mystacinus and the two subgenera Apodemus and Sylvaemus). Within each subgenus, divergence times are between 5.4 and 6 My for Apodemus and between 2.2 and 3.5 My for Sylvaemus and mystacinus.     

Molecular evidence for adaptive radiation of Micromeria Benth. (Lamiaceae) on the Canary Islands as inferred from chloroplast and nuclear DNA sequences and ISSR fingerprint data

The Canary Islands have been a focus for phylogeographic studies on the colonization and diversification of endemic angiosperm taxa. Based on phylogeographic patterns, both inter island colonization and adaptive radiation seem to be the driving forces for speciation in most taxa. Here, we investigated the diversification of Micromeria on the Canary Islands and Madeira at the inter- and infraspecific level using inter simple sequence repeat PCR (ISSR), the trnK-Intron and the trnT-trnL-spacer of the cpDNA and a low copy nuclear gene. The genus Micromeria (Lamiaceae, Mentheae) includes 16 species and 13 subspecies in Macaronesia. Most taxa are restricted endemics, or grow in similar ecological conditions on two islands. An exception is M. varia, a widespread species inhabits the lowland scrub on each island of the archipelago and could represent an ancestral taxon from which radiation started on the different islands. Our analyses support a split between the "eastern" islands Fuerteventura, Lanzarote and Gran Canaria and the "western" islands Tenerife, La Palma and El Hierro. The colonization of Madeira started from the western Islands, probably from Tenerife as indicated by the sequence data. We identified two lineages of Micromeria on Gomera but all other islands appear to be colonized by a single lineage, supporting adaptive radiation as the major evolutionary force for the diversification of Micromeria. We also discuss the possible role of gene flow between lineages of different Micromeria species on one island after multiple colonizations.     

Elytral polymorphism in spittlebugs: Philaenus spumarius (L.) from the Inner Hebrides

The frequencies of colour and pattern morphs of the elytra of Philaenus spumarius are similar on three of the Small Isles of the Inner Hebrides (Eigg, Canna and Muck); the population on the fourth island (Rhum: is somewhat distinct but is like that at sea level on the nearby mountainous mainland. These similarities and differences suggest that these morph frequencies are regulated by natural selection.     

A new method of salt pan formation in intertidal marshes

Summary

Records of fungi occurring in the Hebrides are extended, particularly for Jura and Islay where, respectively, 40 and 47 taxa are recorded for the first time. Twenty taxa are added to the list for Rhum and 89 to that for Colonsay. Additional fungi are also reported for Hirta (St. Kilda) , Bernary, Mingulay, Barra and South Uist in the Outer Hebrides, and Eigg and Canna in the Inner Hebrides.