Hierarchical analysis of the relationship between spatial distribution and abundance of epiphytic lichens (Mt. Olympos-Greece)

The relationship between distribution and abundance of epiphytic lichens on five different substrates (Fagus sylvatica, Pinus nigra, Quercus coccifera, Pinus heldreichii and Quercus pubescens) has been studied. For the first three substrates the above relationship has been studied hierarchically. It was concluded that this relationship is partly represented by the core-satellite distribution. This abundance-distribution pattern could probably be explained by more than one hypothesis and it is probably related with the life strategies of lichen species.     

On the relationship between vertical microdistribution and adaptations to oxygen stress in littoral Chironomidae (Diptera)

Animals that dwell at different depths in the sediment, are adapted to different respiratory environments. It is possible that animals that occur deep in the sediment have a higher hemoglobin concentration than surface-dwelling animals. To test this hypothesis, hemoglobin concentrations and weights of eight chironomid species that dwell in the littoral zone were measured. High hemoglobin concentration and weight both seemed to contribute to an ability to cope with low oxygen concentrations, and determined the vertical distribution of chironomids in the sediment. A multiple regression equation, including these factors, was derived. It may be used to predict the median depth of occurrence for species that were not included in this study. High sensitivity of small animals to oxygen stress is discussed from a theoretical point of view.Research Assistant of the Belgian National Fund for Scientific ResearchResearch Assistant of the Belgian National Fund for Scientific Research     

Temporal and spatial variability in the abundance,biomass and distribution of Palaemon peringueyi (Decapoda: Crustacea) are influenced by biological but not physico-chemical factors in the permanently open Kariega Estuary,South Africa

Biological and physico-chemical factors affecting abundance and biomass of shrimp Palaemon peringueyi were investigated in 2010–2011 in the lower, middle and upper reaches of the freshwater-deprived permanently open Kariega Estuary. Shrimp abundance and biomass ranged from 0 to 88 ind. m^?2 and 0 to 4.4 g wwt m^?2, respectively. Shrimps were most abundant in the lower reach, and highest abundances and biomasses were recorded in the lower reach in June when salinities were low. The shrimps were almost always absent in the upper reach. Juveniles were found mostly in the lower and middle reaches, whereas adults were distributed in all three reaches. Regression analyses showed no statistically significant relationship for either abundance or biomass of the shrimps with temperature, salinity and dissolved oxygen (p > 0.05). The relationship between shrimp abundance and biomass and vegetation cover was positive and statistically significant (R² = 0.109 and 0.185, respectively; p < 0.05). Vegetation cover plays an important role in determining the presence, distribution and abundance or biomass of P. peringueyi in this estuary.     

Primary structures of skin antimicrobial peptides indicate a close,but not conspecific,phylogenetic relationship between the leopard frogs Lithobates onca and Lithobates yavapaiensis (Ranidae)

The phylogenetic relationship between the relict leopard frog Lithobates (Rana) onca (Cope, 1875) and the lowland leopard frog Lithobates (Rana) yavapaiensis (Platz and Frost, 1984) is unclear. Chromatographic analysis of norepinephrine-stimulated skin secretions from L. onca led to the identification of six peptides with antimicrobial activity. Determination of their primary structures indicated that four of the peptides were identical to brevinin-1Ya, brevinin-1Yb, brevinin-1Yc and ranatuerin-2Ya previously isolated from skin secretions of L. yavapaiensis. However, a peptide belonging to the temporin family (temporin-ONa: FLPTFGKILSGLF.NH₂) and an atypical member of the ranatuerin-2 family containing a C-terminal cyclic heptapeptide domain (ranatuerin-2ONa: GLMDTVKNAAKNLAGQMLDKLKCKITGSC) were isolated from the L. onca secretions but were not present in the L. yavapaiensis secretions. Ranatuerin-2ONa inhibited the growth of Escherichia coli (MIC = 50 μM) and Candida albicans (MIC = 100 μM ) and showed hemolytic activity (LC₅₀ = 90 μM) but was inactive against Staphylococcus aureus. The data indicate a close phylogenetic relationship between L. onca and L. yavapaiensis but suggest that they are not conspecific species.     

Interaction between the poly(A)-binding protein Pab1 and the eukaryotic release factor eRF3 regulates translation termination but not mRNA decay in Saccharomyces cerevisiae

Eukaryotic release factor 3 (eRF3) is implicated in translation termination and also interacts with the poly(A)-binding protein (PABP, Pab1 in yeast), a major player in mRNA metabolism. Despite conservation of this interaction, its precise function remains elusive. First, we showed experimentally that yeast eRF3 does not contain any obvious consensus PAM2 (PABP-interacting motif 2). Thus, in yeast this association is different from the well described interaction between the metazoan factors. To gain insight into the exact function of this interaction, we then analyzed the phenotypes resulting from deleting the respective binding domains. Deletion of the Pab1 interaction domain on eRF3 did not affect general mRNA stability or nonsense-mediated mRNA decay (NMD) pathway and induced a decrease in translational readthrough. Furthermore, combined deletions of the respective interacting domains on eRF3 and on Pab1 were viable, did not affect Pab1 function in mRNA stability and harbored an antisuppression phenotype. Our results show that in Saccharomyces cerevisiae the role of the Pab1 C-terminal domain in mRNA stability is independent of eRF3 and the association of these two factors negatively regulates translation termination.     

Spatial relationships between mate acquisition probability and aggregation size in a gregarious coreid bug, (Colpula lativentris): A case of the ideal free distribution under perceptual constraints

Spatial relationships of mate acquisition probability for individuals of both sexes of a gregariously-mating coreid bug, Colpula lativentris, were studied in relation to aggregation size. Operational sex ratio was always strongly male biased. Mate acquisition probability of females was rather constant and independent of aggregation size, as predicted by an ideal free distribution. Moreover laboratory experiments showed that both multiple mating and rearing density little affected female fecundity, suggesting ideal free distribution of females in terms of reproductive success. On the other hand, mate acquisition probability of males was higher in larger aggregations, where more receptive females were available. This male discrepancy from an ideal free distribution was similar to the patterns predicted by an ideal free distribution under perceptual constraints (Abrahams, 1986), but not by that under unequal competitive ability.