The burrow system of the African ice rat Otomys sloggetti robertsi

We studied the architecture of the burrow system of the African ice rat Otomys sloggetti robertsi, a non–hibernating, diurnal murid rodent endemic to the sub–alpine and alpine regions of the southern African Drakensberg and Maluti mountains. In our study site we found ice rat burrows in two substrates (organic and mineral soils). The structure of the burrow system was similar in both soil types, comprising several interlinking tunnels, numerous burrow entrances and 1–2 nest chambers. However, the surface area of the burrow systems in organic soils was larger, the tunnels were deeper, and some of the systems contained two levels, all of which was contrary to our assumption that digging would be more difficult in the compact organic soils. Ice rats occur in colonies of up to 17 individuals, and the collected efforts of several individuals are required for constructing complex burrow systems. The burrow structure is similar to those of two arid–adapted relatives, Parotomys brantsii and Parotomys littledalei, suggesting that the burrow architecture among these three taxa may reflect the similar functions of burrows in extreme environments. For ice rats, burrows could provide a suitable microhabitat in which to escape adverse environmental conditions, particularly during winter. Moreover, ice rat burrows contained far fewer nest chambers than those of both Parotomys species, indicating that members in a colony share nest chambers, thereby facilitating huddling. Finally, the extensive interlinking tunnels may provide underground routes to aboveground feeding sites, thereby reducing exposure to adverse conditions.     

Restoration and management for cliff‐nesting birds in Mediterranean mining sites: the Sand Martin case study

Habitat enhancement for birds is frequently implemented during mine site restoration. Cliff‐nesting birds often colonize anthropogenic environments such as mining areas (aggregate sites and quarries for aggregate and cement production). Mining activity can compromise breeding success, causing cliff‐nesting birds to depend on the management and restoration of mining areas. The objective of our study is to assess the importance of mine site habitats for Sand Martin conservation and reconcile mining activity with breeding success in Mediterranean environments. We studied Sand Martin breeding habitat preferences in mining areas at three spatial scales. At the mining site scale, we compared 10 mining sites with Sand Martin burrows with 19 mining sites without burrows. At the colony scale (vertical structures with colonies), we evaluated the relationships between the number of breeding pairs, number of burrows, and colony characteristics within 30 distinct Sand Martin colonies. At the burrow scale, we compared the characteristics of the available vertical structure with the areas used by Sand Martins. At the mining site scale, Sand Martins preferred more surface of water bodies, shorter distances to flowing water, older sites, and mining sites which produce aggregates instead of cement. At the colony scale, Sand Martins preferred southwest orientations and stockpiles to vertical extraction faces. At the burrow scale, birds preferred the most vertical areas of the face. Our results support the need for effective habitat restoration and improved management for more effective Sand Martin conservation within mining areas. Simple interventions can enhance habitat quality and conservation of cliff‐nesting birds.     

Determinants of between‐year burrow re‐occupation in a colony of the European bee‐eater Merops apiaster

Re‐occupation of existing nesting burrows in the European bee‐eater Merops apiaster has only rarely – and if so mostly anecdotically – been documented in the literature record, although such behavior would substantially save time and energy. In this study, we quantify burrow re‐occupation in a German colony over a period of eleven years and identify ecological variables determining reuse probability. Of 179 recorded broods, 54% took place in a reused burrow and the overall probability that one of 75 individually recognized burrows would be reused in a given subsequent year was estimated as 26.4%. This indicates that between‐year burrow reuse is a common behavior in the study colony which contrasts with findings from studies in other colonies. Furthermore, burrow re‐occupation probability declined highly significantly with increasing age of the breeding wall. Statistical separation of within‐ and between‐burrow effects of the age of the breeding wall revealed that a decline in re‐occupation probability with individual burrow age was responsible for this and not a selective disappearance of burrows with high re‐occupation probability over time. Limited duty cycles of individual burrows may be caused by accumulating detritus or decreasing stability with increasing burrow age. Alternatively, burrow fidelity may presuppose pair fidelity which may also explain the observed restricted burrow reuse duty cycles. A consequent next step would be to extend our within‐colony approach to other colonies and compare the ecological circumstances under which bee‐eaters reuse breeding burrows.     

Obligate crayfish burrow use and core habitat requirements of crawfish frogs

Crawfish frogs (Lithobates areolatus) have experienced declines across large portions of their former range. These declines are out of proportion to syntopic wetland-breeding amphibian species, suggesting losses are resulting from unfavorable aspects of non-breeding upland habitat. Crawfish frogs get their common name from their affinity for crayfish burrows, although the strength of this relationship has never been formally assessed. We used radiotelemetry to address 4 questions related to upland burrow dwelling in crawfish frogs: 1) what burrow types are used and how do they function to affect crawfish frog survivorship; 2) what are the physical characteristics and habitat associations of crawfish frog burrows; 3) what are the home range sizes of crawfish frogs when burrow dwelling; and 4) where are crawfish frog burrows situated with respect to breeding wetlands? We tracked crawfish frogs to 34 burrows, discovered another 7 occupied burrows, and therefore report on 41 burrows. Crawfish frogs exclusively occupied crayfish burrows as primary burrows, which they inhabited for an average of 10.5 months of the year. With one exception, crawfish frogs also used crayfish burrows as secondary burrows—temporary retreats occupied while exhibiting breeding migrations or ranging forays. Burrows were exclusively located in grassland habitats, although crawfish frogs migrated through narrow woodlands and across gravel roads to reach distant grassland primary burrow sites. Home range estimates while inhabiting burrows were 0.05 m² (the area of the burrow entrance plus the associated feeding platform) or 0.01 m³ (the estimated volume of their burrow). Crawfish frog burrows were located at distances up to 1,020 m from their breeding wetlands. To protect crawfish frog populations, we recommend a buffer (core habitat plus terrestrial buffer) of at least 1.2 km around each breeding wetland. Within this buffer, at least 3 critical habitat elements must be present: 1) extensive grasslands maintained by prescribed burning and/or logging, 2) an adequate number of upland crayfish burrows, and 3) no soil disturbance of the sort that would destroy crayfish burrow integrity. © 2012 The Wildlife Society.     

Olfactory navigation to the nesting burrow in Leach's petrel (oceanodroma leucorrhoa)

Visual, auditory, and olfactory navigation in the homing behaviour of Leach's petrel to the nesting burrow were investigated. Petrels returning to their burrows at night hovered above the thick spruce-fir canopy in the vicinity of the burrow before plummeting to the forest floor a few metres downwind of their burrows. They then walked upwind to their burrows. Birds landed closer to, and followed more circuitous routes to, their burrows in still air than in a wind. They failed to avoid obstacles in the path to burrows, often failed to locate accurately burrow entrances on first trial, and vocalized only after entering the burrow. In a Y-maze olfactorium, captive breeding petrels chose an air current coming from their own nest material in preference to one from similar materials collected on the forest floor. In the same apparatus, birds did not respond positively to air currents from their own stomach oil or preen gland oil. Petrels taken from burrows and released that same night did not return within a week if their external nares were plugged or if their olfactory nerves were transected. They did return if not operated on or if only subjected to sham operations. These results support an olfactory guidance system in burrow location and argue against visual or auditory guidance.     

The underground life of the oriental mole cricket: an analysis of burrow morphology

The underground life of the oriental mole cricket Gryllotalpa orientalis has been investigated by studying the structure of its burrows under different environmental situations and in different seasons. The different uses of different burrow types and their advantages and disadvantages have been examined. The total length, number of tunnels and combination of burrow types varied from a simple tunnel to a more complex one with branches at various angles to the surface, burrow types being divided roughly into shallow horizontal or deep vertical ones. In horizontal burrows, the branching structure was well developed in various directions. It is notable that the vertical burrows of G. orientalis were occupied by only one individual. Both vertical and horizontal burrows were used for foraging: vertical burrows for plants with subterranean stems and horizontal burrows for creeping plants. Vertical burrows were also used for hiding from predators, resting, moulting and overwintering, whereas horizontal burrows were used for escaping from predators and as mating routes. Egg chambers were constructed beside horizontal burrows, and calling burrows were constructed as part of horizontal burrows. Based on their current requirements, mole crickets continuously modify their burrow structures or change burrowing sites.     

Use of burrow entrance flaps to minimise interference to Chatham petrel (

The Chatham petrel (Pterodroma axillaris) is an endangered species, restricted to a single population on South East Island, Chatham Islands. The key threat to breeding success is loss of chicks as a result of interference by broad-billed prions (Pachyptila vittata) prospecting for burrows for their oncoming breeding season. The effectiveness in decreasing interference using an artificial burrow entrance flap was investigated. The flap exploits behavioural differences between the species. Chatham petrels have a high incentive to push through a flap due to their investment in their burrow and chick, while prospecting prions are influenced by ease of access when searching for potential burrows. This trial found 90% of Chatham petrels entered their burrows through the artificial flap. Flaps acted as barriers to broad-billed prions, where 22% entered the burrow through the flap (P <0.01) compared to the control burrows. Artificial burrow flaps have the potential to provide a low cost, low labour strategy for protecting the known breeding population of Chatham petrels.     

An ‘ecological trap’ for yellow warbler nest microhabitat selection

Contrary to assumptions of habitat selection theory, field studies frequently detect ‘ecological traps’, where animals prefer habitats conferring lower fitness than available alternatives. Evidence for traps includes cases where birds prefer breeding habitats associated with relatively high nest predation rates despite the importance of nest survival to avian fitness. Because birds select breeding habitat at multiple spatial scales, the processes underlying traps for birds are likely scale‐dependent. We studied a potential ecological trap for a population of yellow warblers Dendroica petechia while paying specific attention to spatial scale. We quantified nest microhabitat preference by comparing nest‐ versus random‐site microhabitat structure and related preferred microhabitat features with nest survival. Over a nine‐year study period and three study sites, we found a consistently negative relationship between preferred microhabitat patches and nest survival rates. Data from experimental nests described a similar relationship, corroborating the apparent positive relationship between preferred microhabitat and nest predation. As do other songbirds, yellow warblers select breeding habitat in at least two steps at two spatial scales; (1) they select territories at a coarser spatial scale and (2) nest microhabitats at a finer scale from within individual territories. By comparing nest versus random sites within territories, we showed that maladaptive nest microhabitat preferences arose during within‐territory nest site selection (step 2). Furthermore, nest predation rates varied at a fine enough scale to provide individual yellow warblers with lower‐predation alternatives to preferred microhabitats. Given these results, tradeoffs between nest survival and other fitness components are unlikely since fitness components other than nest survival are probably more relevant to territory‐scale habitat selection. Instead, exchanges of individuals among populations facing different predation regimes, the recent proliferation of the parasitic brown‐headed cowbird Molothrus ater, and/or anthropogenic changes to riparian vegetation structure are more likely explanations.     

Burrow Use and the Influence of Ectoparasites in Brants' Whistling Rat Parotomys brantsii

In Brants' whistling rat, Parotomys brantsii, single animals inhabit unusually complex burrow systems containing several nest chambers. We investigated burrow use and examined the effect of ectoparasites on choice of alternative nest chambers by radiotelemetrically monitoring the nocturnal sleeping locations of individual whistling rats, before and after treating them to remove ectoparasites. Prior to treatment, animals used several different nest chambers within a single burrow, moving from one chamber to another every 1.6 d on average, and most individuals also slept in more than one burrow. Anti‐parasite treatment reduced the rate at which animals switched from one nest chamber to another within a burrow. Screening of a separate sample of animals for ectoparasites revealed that they were infested with fleas, mainly Xenopsylla eridos. We suggest that by switching periodically from one nest chamber to another, whistling rats reduce the rate at which ectoparasites, especially fleas, accumulate.     

Novel use of burrow casting as a research tool in deep-sea ecology

Although the deep sea is the largest ecosystem on Earth, its infaunal ecology remains poorly understood because of the logistical challenges. Here we report the morphology of relatively large burrows obtained by in situ burrow casting at a hydrocarbon-seep site and a non-seep site at water depths of 1173 and 1455 m, respectively. Deep and complex burrows are abundant at both sites, indicating that the burrows introduce oxygen-rich sea water into the deep reducing substrate, thereby influencing benthic metabolism and nutrient fluxes, and providing an oxic microhabitat for small organisms. Burrow castings reveal that the solemyid bivalve Acharax johnsoni mines sulphide from the sediment, as documented for related shallow-water species. To our knowledge, this is the first study to examine in situ burrow morphology in the deep sea by means of burrow casting, providing detailed information on burrow structure which will aid the interpretation of seabed processes in the deep sea.     

Description of the nursery burrow of the Mexican cottontail rabbit Sylvilagus cunicularius under seminatural conditions

The rabbit Sylvilagus cunicularius is endemic to Mexico and is one of the largest, most widespread, but little studied of the country’s 10 rabbit species. As part of a project investigating its reproductive biology, we describe here for the first time the nursery burrow, vital for the survival of the altricial young. During the breeding seasons of 2008–2012, we collected data from 25 nursery burrows and 22 nests constructed by eight females (three wild caught and five captive bred) kept in enclosures within their natural habitat in the Malinche National Park in the central Mexican state of Tlaxcala. Although not a burrow-living species, several days before parturition, females dug a nursery burrow in which they constructed a nest. These burrows were short, shallow tunnels with a median length of 23 cm, typically located beneath grass tussocks or shrubs, and ending in a nest chamber a median 17 cm beneath the surface. Nests consisted of dry grass, fragments of woody plants, pine needles, and alfalfa hay and oat straw provided as supplementary food, fur pulled from the mother’s body, and her fecal pellets. Females nursed their young at the burrow entrance, and until the young were approximately 12 days old, they closed the entrance after each visit in such a way as to make it very difficult for humans to locate. Surprisingly, these nursery burrows were more similar to those of the European rabbit Oryctolagus cuniculus and the pygmy rabbit Brachylagus idahoensis than to other Sylvilagus species studied to date. As almost 50 % of burrows did not result in emergent young, present work is directed to determining what characterizes successful burrows.     

Breeding biology and conservation of the Black-vented Shearwater Puffinus opisthomelas

The Black-vented Shearwater Puffinus opisthomelas is endemic to the Pacific coast of Baja California, Mexico. We studied the breeding biology of this species at Natividad Island in 1997 and 1998. The colony at Natividad Island covers approximately 2.5 km² and we estimated there to be 114 455 (± 27 520 95% CI) burrows in the colony. In 1997 burrow occupancy was 66.9%, providing a population estimate of 76 570 (± 18 411 95% CI) breeding pairs, representing about 95% of the world's population of this species. In 1997 the peak in egg laying occurred in early March and hatching began on 7 May. The incubation period averaged 51 days (± 6 sd) and chick rearing averaged 69 days (± 3 sd). In 1998 burrow occupancy was lower (19.6%) and nest initiation was later (peak egg laying in mid-April), perhaps a result of El Niño conditions that prevailed in the Eastern Pacific at that time. We calculated that the development of the town and roads on Natividad Island have destroyed over 15% (26 532 burrows) of the breeding habitat on the island.     

Burrow use by Tibetan Ground Tits Pseudopodoces humilis: coping with life at high altitudes

The Tibetan Ground Tit Pseudopodoces humilis is a high-altitude passerine endemic to the Tibetan Plateau. A 4-year study in alpine meadows in Northern Tibet at 4300 m asl demonstrated that rather than using Pika Ochotona spp. holes as previously reported, the birds excavated one nest burrow themselves in spring and another after breeding, which they used for roosting in winter. Both the nesting and winter-roosting burrows comprised a straight tunnel leading to an ellipsoid chamber. There were no significant differences in placement or structural characteristics between the two types of burrows, except that winter-roosting burrows had a significantly smaller entrance diameter. Most burrows were 100–160 cm long and their chambers 20–40 cm deep. Tibetan Ground Tits tended to maximize the thermal benefits of their burrows by adjusting their spatial and structural characteristics in response to local solar radiation and wind regimes. Burrows tended to be oriented towards the sun and away from prevailing winds, presumably to maintain burrow temperature. Longer tunnels could function to save heat from solar radiation or reduce wind-disturbance, while shorter tunnels allow chambers to be warmed sooner in situations where wind potentially reduced soil temperatures. The thermal benefits to the birds of burrow architecture are likely to play a crucial role throughout the year in these extreme alpine environments.     

Cliff characteristics,neighbour requirements and breeding success of the colonial Cape Vulture Gyps coprotheres

The breeding success of endangered colonial nesting species is important for their conservation. Many species of Gyps vultures form large breeding colonies that are the foci of conservation efforts. The Cape Vulture is a globally threatened species that is endemic to southern Africa and has seen a major reduction in its population size (≥ 50% over 48 years). There is evidence that breeding colonies are prone to desertion as a result of human disturbance. Factors that influence the occupancy and breeding success of individual nest‐sites is not fully understood for any African vulture species. We investigated cliff characteristics and neighbour requirements of the Msikaba Cape Vulture colony, a major breeding colony in the southern node of the population in the Eastern Cape, South Africa, together with their nest‐site occupation and breeding success over 13 years. In total, 1767 breeding attempts were recorded. Nest‐sites that had a higher elevation, smaller ledge depth, greater total productivity and were surrounded by conspecifics were more likely to be occupied, although the amount of overhang above the nest was not an important predictor of occupancy. In accordance with occupation, nest‐sites with a smaller ledge depth had higher breeding success; however, nests with a greater overhang were also more successful and height of the nest‐site was not an important predictor of breeding success. The breeding success of a nest‐site in a given year was positively influenced by the number of direct nest neighbours, and nests in the middle of high‐density areas had greater breeding success. This suggests that maintaining a high nest density may be an important consideration if declines of reproducing adults continue. Breeding success declined over the study period, highlighting the effects of a temporal variation or observer bias. Our results identified optimal nest‐site locations (ledge depths of 1 m, at a height of 180 m) and their effects on breeding success. This information can be used for planning reintroduction efforts of the endangered Cape Vulture and for their ongoing conservation.     

Individual inter‐annual nest‐site relocation behaviour drives dynamics of a recently established Barnacle Goose Branta leucopsis colony in sub‐arctic Russia

Avian breeding colonies are generally in a continuous state of flux, some parts growing whilst others shrink as individuals move within the colony on the search for better nest‐sites. We examined the role of experience in breeding patch choice by individually marked Barnacle Geese Branta leucopsis in a recently established colony in sub‐arctic Russia. Individuals failing to reproduce successfully tended to shift nest location further the following season than did successful pairs, and they did so towards the most dense nest aggregations within the colony, where reproductive success was higher. We suggest that individual decisions on nest‐site choice shape the spatial dynamics of this colony.     

Incubation failure and nest abandonment by Leach's Storm‐Petrels detected using PIT tags and temperature loggers

ABSTRACT The nocturnal activity of burrow‐nesting seabirds, such as storm‐petrels and shearwaters, makes it difficult to study their incubation behavior. In particular, little is known about possible differences in the incubation behavior of adults at successful and unsuccessful nests. We combined the use of passive integrated transponder (PIT) technology and nest‐temperature data loggers to monitor the incubation behavior of 10 pairs of Leach's Storm‐Petrels (Oceanodroma leucorhoa). The mean incubation bout length was 3.31 ± 0.59 (SD) days for individual adults at successful nests (N= 4) and 1.84 ± 1.16 d for individuals at unsuccessful nests (N= 6). Mean bout length for pairs in successful burrows (3.51 ± 0.56 d) did not differ significantly (P= 0.07) from that for pairs in unsuccessful burrows (1.80 ± 1.20 d), perhaps due to one failed nest with a high mean bout length (4.15 d). The total number of incubation bouts per parent (4.3 ± 1.9 bouts) did not differ with hatching success. Adults whose nests failed repeatedly exhibited truncated incubation bouts (< 12 h) prior to complete nest failure and were more likely than successful parents to make brief visits to nearby, occupied nesting burrows. Our results suggest that the decision by Leach's Storm‐Petrels to abandon a nest is not an abrupt one. Rather, failed nesting attempts may be characterized by truncated incubation bouts where individuals pay the energetic cost of travel to and from the burrow, but do not remain long enough to successfully incubate the egg.     

Differences in habitat selection between Chatham petrels (

The Chatham petrel (Pterodroma axillaris) is an endangered species restricted to a single population on South East Island, Chatham Islands, New Zealand. The key threat to Chatham petrel breeding success is interference with chicks by broad-billed prions (Pachyptila vittata) prospecting for burrows for their oncoming breeding season. This burrow competition has resulted from alteration to breeding habitat by humans throughout the Chatham Islands. Understanding habitat preferences may enable managers to manipulate habitat to reduce burrow competition and will be essential in order to translocate Chatham petrels to a proposed second colony. Habitat characteristics surrounding both Chatham petrel and broad-billed prion burrows were quantified and selection ratios compared. Both Chatham petrels and broad-billed prions selected habitat factors associated with mature forest. Chatham petrels avoided a large number of habitat characteristics, which suggests they were habitat specific, and their preferred habitat is now limited. Broad- billed prions used a wide range of habitat characteristics, which suggests they are not habitat specific. This study recommends that selection values be used when deciding on the best location to establish a second Chatham petrel colony.     

Calibration of a burrow count index for the Indian desert jird, Meriones hurrianae

Population estimates, often difficult to acquire, warrantee the use of an index as an economical substitute for rapid assessments of populations. We estimated population size of the little known social, semi-fossorial Indian desert jird (Meriones hurrianae) in Kachchh, Gujarat, India under closed population capture-mark-recapture (CMR) framework to calibrate a burrow count index for the species. A total of 147 individuals were trapped in 16 colonies using baited Sherman traps and the number of burrow entrances at each colony was recorded. Data from colonies with low number of captures were pooled to estimate capture probability using Huggins heterogeneity models with gender, site, body weight and age category as covariates in Program MARK. Colony sizes ranged from 2 to 46 individuals. The number of burrow entrances was calibrated against CMR-based population estimates using least squares regression (n = 16, adjusted R ² = 0.96, t = 18.18, P < 0.001). The index was further validated using Jackknife (JK) analysis where JK-predicted population estimates strongly correlated with CMR estimates (r = 0.96, P < 0.001). In habitats and climatic conditions similar to Kachchh and within the range of colony sizes sampled, our calibrated index can be a valuable and effective tool for large scale surveys of the desert jird, which occupies a keystone trophic level in the semi-arid ecosystem.     

Location of long‐term communal burrows of a threatened arid‐zone lizard in relation to soil and vegetation

The great desert skink (Liopholis kintorei) of the Egerniinae subfamily (Reptilia: Scincidae) is a communal burrowing lizard that inhabits arid spinifex grasslands in central Australia. Great desert skink activity is centred in and around the burrows which are inhabited for many years. However, it is not known whether skinks select burrow sites with specific attributes or how continuing occupancy of burrows is influenced by the surrounding habitat; especially post‐fire, when plant cover is reduced. Here, we test whether great desert skink burrows in areas burnt 2 years previously and in longer unburnt areas are associated with particular habitat attributes, and whether there are differences between occupied and recently abandoned burrow sites. Vegetation composition, cover and soil surface characteristics at 56 established great desert skink burrows, including occupied and recently unoccupied burrows, were compared with 56 random nearby non‐burrow control sites. Burrow sites had higher plant cover compared with the surrounding landscape in both recently burnt and longer unburnt areas and were more likely to be associated with the presence of shrubs. Soil stability and infiltration were also higher at burrow sites. However, we found no evidence that burrows with lower cover were more likely to be abandoned. Our results suggest that great desert skinks may actively select high cover areas for burrow construction, although differences between burrow and control sites may also partly reflect local changes to plant cover and composition and soil properties resulting from burrow construction and long‐term habitation of a site. Further research should determine if burrows with shrubs or higher plant cover provide greater protection from predators, more structural stability for burrow construction, increased prey abundance or other benefits. We recommend that maintenance of areas with relatively higher plant cover be prioritized when managing great desert skink habitat.     

Burrow structure and use in the sand fiddler crab, Uca pugilator (Bosc)

Uca pugilator, the sand fiddler crab, constructs two kinds of burrows in protected, sandy upper-intertidal and supratidal substrates on the west coast of Florida. Temporary burrows are built and used as a refuge by non-breeding crabs during high tide periods and at night when crabs cease feeding in the intertidal zone. Breeding burrows are constructed and defended by courting males and are the site of mating, oviposition and the incubation of eggs by females. Up to three ovigerous females may be accommodated in a single breeding burrow, each female sequestered in a separate terminal chamber. The construction and defence of burrows specialized for breeding may be an adaptive response by males to the preferences females exhibit when selecting a breeding site.