微区XRF技术分析无机元素在植物中的原位分布

植物的无机元素分布特征对植物生理过程具有重要的指标作用, 可揭示营养物质分布、代谢途径及毒理耐受性等多种生命过程。用微区XRF技术测试样品中无机元素的分布, 具有原位无损、可进行较大面积样品连续成像分析以及前处理过程简单等诸多优势。将微区XRF技术应用于植物样品不同器官的无机元素分布检测, 旨在探讨该技术在植物样品测试中的仪器参数选择、样品前处理方法和数据后处理手段等对测试结果的影响。为得到可靠的实验结果, 对不同含水量的器官进行不同的前处理, 并比较不同驻留时间、测试腔体真空与否等仪器条件对测试结果的影响, 同时对数据处理方法进行探索, 包括对获得的数据进行图像叠加及对不同元素浓度比例进行半定量分析。研究结果表明, 微区XRF技术测试植物样品中无机元素分布具有一定的技术优势。     

不同产地黄芩中无机元素含量及其与根际土壤无机元素的关系

药用植物中各无机元素含量的不仅影响药用植物的生长发育,也是药材有效成分的构成因子。通过对全国范围内16个不同产地(即居群)的92个野生黄芩(Scutellaria baicalensis Georgi)样本及其相应的根际土壤中10种无机元素含量的分析,发现不同产地黄芩及其根际土壤无机元素都有很大变异,且不同产地黄芩根际土壤中无机元素的变异远大于黄芩药材中无机元素的变异。总体来看,黄芩中Mg(9级)含量较其他植物含量高;P(1级)、K(2级)、Mn(3级)含量与其他植物相比处处较低水平;黄芩对Sr(富集系数达到3.52)有较强富集。并且通过无机元素分布曲线分析建立了无机元素指纹谱,主成分分析筛选出黄芩主要特征无机元素为Mg、K、Ca、Fe、Zn。本研究还表明,黄芩对各元素的吸收能力受产地的影响较大,提示黄芩对无机元素的吸收与各产地根际土壤无机元素有一定关联性。     

Multivariate statistical analysis of nutrients and trace elements in plants and soil from northwestern Russia

Results are summarized of several field and greenhouse experiments designed to estimate differences in the ability of some plant species to take up from soil essential nutrients and various trace elements and transfer them from roots to upper plant parts. Instrumental neutron activation analysis was used to determine concentrations of 22 elements in plant and soil samples. Correlation and principal component analysis were applied for interpreting a large volume of experimental results. In many cases there was no statistically significant positive correlation between element concentrations in soil and concentrations of these elements in plants. Moreover, relationships between elements were often different in soil and in different plant parts, thereby suggesting quite different element behaviours in soil and in plants. Our experimental results and data published in the literature revealed that macro- and trace element concentrations might serve as a specific indicator of plant taxonomy, thus allowing for differentiation of the plants in accordance with concentrations of certain elements in roots or in leaves. Short-term variations in concentrations of elements typical for different plant species and factors affecting these variations indicated that diurnal dynamics of plant element concentrations were regular and species-specific.     

Bioremediation and Biorestoration of a Crube Oil-Contaminated Freshwater Wetland on the St.Lawrence River

Biostimulation by nutrient enrichment and phytoremediation were studied for the restoration of an acutely stressed freshwater wetland experimentally exposed to crude oil. The research was carried out along the shores of the St. Lawarence River at Ste. Croix, Quebec, Canada. The research determined the effectiveness of fertilizer addition in enhancing the biodegradation rates of residual oil. It further examined the rate at which the stressed ecosystem recovered with and without the addition of inorganic fertilizers and the role of nutrients in enhancing wetland restoration in the absence of healthy wetland plants. Chemical analysis of integrated sediment core samples to the depth of oil penetration within the experimental plots indicated that addition of inorganic nutrients did not enhance the disappearance of alkanes or PAHs. In surface samples, however, hydrocarbon disappearance rates were higher when the metabolic activity of wetland plants was suppressed by the removal of emergent plant growth. These results suggest that oxygen limitation plays a major role in preventing rapid biodegradation of hydrocarbons in anoxic wetland sediment.     

Mineral contents of Aloe vera leaf gel and their role on streptozotocin-induced diabetic rats

The role of some inorganic elements like vanadium, zinc, sodium, potassium, calcium, copper, manganese, and traces of chromium in the improvement of impaired glucose tolerance and their indirect role in the management of diabetes mellitus are being increasingly recognized. In traditional methods, medicinal plants are being used, which contain both organic and inorganic constituents. In the present study, an attempt has been made to analyze the inorganic elements present in Aloe vera leat gel and their role on diabetes-related biochemical alterations in experimental rats. Special emphasis was given to the inorganic parts by carefully preparing ash of the leaf gel. The results clearly indicate the presence of several hypoglycemic-activity-possessing elements in the gel. The ash treatment also resulted in hypoglycemic action. In conclusion, the presence of various inorganic trace elements in the gel might account for the hypoglycemic nature of the plant.     

Imaging techniques for elements and element species in plant science

Revealing the uptake, transport, localization and speciation of both essential and toxic elements in plants is important for understanding plant homeostasis and metabolism, subsequently, providing information for food and nutrient studies, agriculture activities, as well as environmental research. In the last decade, emerging techniques for elemental imaging and speciation analysis allowed us to obtain increasing knowledge of elemental distribution and availabilities in plants. Chemical imaging techniques include mass spectrometric methods such as secondary ionization mass spectrometry (SIMS), laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) and synchrotron-based techniques such as X-ray fluorescence spectroscopy (SRXRF), and so forth. On the other hand, X-ray absorption spectroscopy (XAS) based on synchrotron radiation is capable of in situ investigation of local atomic structure around the central element of interest. This technique can also be operated in tandem with SRXRF to image each element species of interest within plant tissue. In this review, the principles and state-of-the-art of these techniques regarding sample preparation, advantages and limitations, and improvement of sensitivity and spatial resolution are discussed. New results with respect to elemental distribution and speciation in plants revealed by these techniques are presented.     

植物的硅素营养研究综述

本文阐述了硅在植物中的形态、分布、吸收、积累、生理作用及其与其它元素的关系。研究表明：1．硅主要以二氧化硅胶(SiO2.nH2O)的无机物形态存在于植物表皮细胞和细胞壁。植物体内硅的含量在不同物种间差异很大。根据硅的含量,可将一般栽培植物分为三种类群;同时根据植物硅钙摩尔比值可将植物分为喜硅植物和非喜硅植物。硅在植物各部分分布不均匀,并且随着植株的生长发育,植株中的硅含量不断变化。植物中硅的积累受环境中多种因素的影响。2．植物主要以单硅酸形态吸收硅,不同植物吸收硅的能力不同。水稻具有主动吸硅能力,其吸收过程受体内代谢活动影响<请合法使用软件>其它大多数植物主要以被动方式吸收硅,但不排除具有选择性吸收硅的可能性。3．硅对植物的生长发育产生影响。硅是一些植物(如禾本科植物、甜菜、木贼属植物及某些硅藻)的必需元素。硅对其它很多植物具有有益作用。硅对植物的作用主要表现在对形态结构、生理过程和抗逆能力三方面的影响 上。在去硅条件下,多种植物表现出缺硅症状。4．硅对植物吸收利用对其它营养元素产生影响。硅对不同元素的影响方式和程度不同,同时随着植物的生长发育,对某种元素的作用常发生变化。     

Quantitative plant proteomics

Quantitation is an inherent requirement in comparative proteomics and there is no exception to this for plant proteomics. Quantitative proteomics has high demands on the experimental workflow, requiring a thorough design and often a complex multi-step structure. It has to include sufficient numbers of biological and technical replicates and methods that are able to facilitate a quantitative signal read-out. Quantitative plant proteomics in particular poses many additional challenges but because of the nature of plants it also offers some potential advantages. In general, analysis of plants has been less prominent in proteomics. Low protein concentration, difficulties in protein extraction, genome multiploidy, high Rubisco abundance in green tissue, and an absence of well-annotated and completed genome sequences are some of the main challenges in plant proteomics. However, the latter is now changing with several genomes emerging for model plants and crops such as potato, tomato, soybean, rice, maize and barley. This review discusses the current status in quantitative plant proteomics (MS-based and non-MS-based) and its challenges and potentials. Both relative and absolute quantitation methods in plant proteomics from DIGE to MS-based analysis after isotope labeling and label-free quantitation are described and illustrated by published studies. In particular, we describe plant-specific quantitative methods such as metabolic labeling methods that can take full advantage of plant metabolism and culture practices, and discuss other potential advantages and challenges that may arise from the unique properties of plants.     

Decontamination of sludge by the METIX-AC process. Part II: effects on maize growth and bioaccumulation of metals

Given the fact that, according to our knowledge, no study has compared the agro-environmental use of decontaminated with non-decontaminated sludge, a greenhouse experiment was carried out to test the growth of maize (Zea mays L., G-4011 Hybrid) and bioaccumulation of metals in the presence of four different sludges (MUC, QUC, BEC and DAI), before and after their decontamination by a novel process (METIX-AC). Data showed that decontaminated sludge ameliorated plant growth and biomass production, and decreased bioaccumulation of metals, more than control soil, inorganic chemical fertilization, or conventional non-decontaminated sludge. Since chemicals used by the METIX-AC process contained S and Fe, decontaminated sludge introduced large amounts of these elements, while the overall presence of metals was reduced. Often, sludge dose also affected maize growth and bioaccumulation of metals. Overall, no toxicity to plants was noticed and bioaccumulation and transfer of many metals remained below the limits reported in the literature.     

Visualising the ionome in resistant and susceptible plant–pathogen interactions

At the morphological and anatomical levels, the ionome, or the elemental composition of an organism, is an understudied area of plant biology. In particular, the ionomic responses of plant–pathogen interactions are scarcely described, and there are no studies on immune reactions. In this study we explored two X-ray fluorescence (XRF)-based ionome visualisation methods (benchtop- and synchrotron-based micro-XRF [µXRF]), as well as the quantitative inductively coupled plasma optical emission spectroscopy (ICP-OES) method, to investigate the changes that occur in the ionome of compatible and incompatible plant–pathogen interactions. We utilised the agronomically important and comprehensively studied interaction between potato (Solanum tuberosum) and the late blight oomycete pathogen Phytophthora infestans as an example. We used one late blight-susceptible potato cultivar and two resistant transgenic plant lines (only differing from the susceptible cultivar in one or three resistance genes) both in control and P. infestans-inoculated conditions. In the lesions from the compatible interaction, we observed rearrangements of several elements, including a decrease of the mobile macronutrient potassium (K) and an increase in iron (Fe) and manganese (Mn), compared with the tissue outside the lesion. Interestingly, we observed distinctly different distribution patterns of accumulation at the site of inoculation in the resistant lines for calcium (Ca), magnesium (Mg), Mn and silicon (Si) compared to the susceptible cultivar. The results reveal different ionomes in diseased plants compared to resistant plants. Our results demonstrate a technical advance and pave the way for deeper studies of the plant–pathogen ionome in the future.     

Rapid and accurate analyses of silicon and phosphorus in plants using a portable X-ray fluorescence spectrometer

The elemental analysis of plant material is a frequently employed tool across biological disciplines, yet accurate, convenient and economical methods for the determination of some important elements are currently lacking. For instance, digestion-based techniques are often hazardous and time-consuming and, particularly in the case of silicon (Si), can suffer from low accuracy due to incomplete solubilization and potential volatilization, whilst other methods may require large, expensive and specialised equipment. Here, we present a rapid, safe and accurate procedure for the simultaneous, nonconsumptive analysis of Si and phosphorus (P) in as little as 0.1 g dried and ground plant material using a portable X-ray fluorescence spectrometer (P-XRF). We used certified reference materials from different plant species to test the analytical performance of P-XRF and show that the analysis suffers from very little bias and that the repeatability precision of the measurements is as good as or better than that of other methods. Using this technique we were able to process and analyse 200 ground samples a day, so P-XRF could provide a particularly valuable tool for plant biologists requiring the simultaneous nonconsumptive analysis of multiple elements, including those known to be difficult to measure such as Si, in large numbers of samples.     

Assembly of two transgenes in an artificial chromatin domain gives highly coordinated expression in tobacco

The chromatin loop model predicts that genes within the same chromatin domain exhibit coordinated regulation. We here present the first direct experimental support for this model in plants. Two reporter genes, the E. coli beta-glucuronidase gene and the firefly luciferase gene, driven by different promoters, were placed between copies of the chicken lysozyme A element, a member of the matrix-associated region (MAR) group of chromatin boundary elements, and introduced in tobacco (Nicotiana tabacum). In plants carrying A elements, quantitative enzyme activities and mRNA levels of both genes show high correlations compared to control plants. The A element thus creates an artificial chromatin domain that yields coordinated expression. Surprisingly, enzyme activities correlated poorly with their respective mRNA levels. We hypothesize that this indicates the occurrence of "error pipelines" in data generation: systematic errors of a given analytical method will point in the same direction and cancel out in correlation analysis, resulting in better correlations. In combining different methods of analysis, however, such errors do not cancel out and as a result relevant correlations can be masked. Such error pipelines will have to be taken into account when different types of (e.g., whole-genome) data sets are combined in quantitative analyses.     

木质纤维素预处理及高值化技术研究进展

木质纤维素生物质是地球上最丰富的可再生生物资源.随着化石能源的消耗及环境的污染,以取代石化燃料为目标的由生物质向生物燃料的转化受到了广泛的关注.木质纤维素有很强的天然抗降解屏障,需先通过物理、化学及微生物等手段进行预处理,进而以更低的成本和更高的效率转化为生物燃料及其他高附加值产品.本文在总结酸碱等传统预处理方法优缺点...     

喀喇昆仑、昆仑山地区植物中一些元素的自然含量特征

 本文论述了喀喇昆仑、昆仑山地区87种植物12个元素含量的特征。在含量水平上>10000ppm的元素有K,Ca,800—5000ppm的元素为Na、Mg,Fe、Al,10—100ppm的元素有Ba、Sr、Ti,Mn,V与Be的含量<10ppm。大多数植物Fe、V,Sr的含量高于一般的自然含量。植物中K含量的频数分布呈正态分布,其余元素的频数分布呈对数正态分布。不同植物种元素含量差异较大,Na的变异系数最大,Ca、Mg含量的变异系数最小。同种植物在不同地点元素含量有较大差异,不同植物种差异也不同。如紫花针茅(Stipa purpurea)>垫状驼绒藜(Ceratoides compacta)>鼠麴凤毛菊(Saussurea gnaphaloides)。植物中元素含量之间的相关分析表明,Fe、Al,V,Ti之间分别达极显著相关水平。用植物中12个元素的资料,对22种植物进行分类和排序,区分出Na,K型植物和Fe,Al,V,Ba型植物。     

Sieving experiment: the controlled recovery of charred plant remains from modern and archaeological samples

Results of experimental retrieval of plant remains (both charred modern and fossil) from three sediment types (clay, gravel and sandy loam) carried out by environmental archaeologists from the Ancient Monuments Laboratory and the Central Archaeology Service, English Heritage, are reported. For each sediment type, six different treatments were carried out using three flotation machines of the Siraf type, two other machines in use in two archaeological units and one experimental machine. The results show that there is invariably considerable discrepancy between the amount of plant material present and that recovered, that the Serif-type machine is among the best currently available and that pretreatment of particular mineral soils may improve recovery of plant macrofossil material.     

植物对氨基酸的吸收及其生理效应

<正> 在古代的农业系统中,所用的肥料都是有机肥,人们并不知道植物依赖于何种物质得以生长繁衍。自1840年,德国化学家李比希(J.U.Liebig)发表了《化学在农业和植物生理学上应用》一书后,人们对植物的营养有了新的认识,认识到矿物质对植物的重要性。李比希在书中指出:“土壤中矿物质是一切绿色植物唯一的养料。植物可以完全依赖于无机物质而生长发育。这一观点即为“植物的矿质营养学说”。该学说后来为生产实践所充分证明,并成为农业化学     

Gypsophile Chemistry Unveiled: Fourier Transform Infrared (FTIR) Spectroscopy Provides New Insight into Plant Adaptations to Gypsum Soils

Gypsum soils are among the most restrictive and widespread substrates for plant life. Plants living on gypsum are classified as gypsophiles (exclusive to gypsum) and gypsovags (non-exclusive to gypsum). The former have been separated into wide and narrow gypsophiles, each with a putative different ecological strategy. Mechanisms displayed by gypsum plants to compete and survive on gypsum are still not fully understood. The aim of this study was to compare the main chemical groups in the leaves of plants with different specificity to gypsum soils and to explore the ability of Fourier transform infrared (FTIR) spectra analyzed with neural network (NN) modelling to discriminate groups of gypsum plants. Leaf samples of 14 species with different specificity to gypsum soils were analysed with FTIR spectroscopy coupled to neural network (NN) modelling. Spectral data were further related to the N, C, S, P, K, Na, Ca, Mg and ash concentrations of samples. The FTIR spectra of the three groups analyzed showed distinct features that enabled their discrimination through NN models. Wide gypsophiles stood out for the strong presence of inorganic compounds in their leaves, particularly gypsum and, in some species, also calcium oxalate crystals. The spectra of gypsovags had less inorganic chemical species, while those of narrow gypsum endemisms had low inorganics but shared with wide gypsophiles the presence of oxalate. Gypsum and calcium oxalate crystals seem to be widespread amongst gypsum specialist plants, possibly as a way to tolerate excess Ca and sulphate. However, other mechanisms such as the accumulation of sulphates in organic molecules are also compatible with plant specialization to gypsum. While gypsovags seem to be stress tolerant plants that tightly regulate the uptake of S and Ca, the ability of narrow gypsum endemisms to accumulate excess Ca as oxalate may indicate their incipient specialization to gypsum.     

Understanding flux in plant metabolic networks

The revolutionary growth in our ability to identify the 'parts list' of cellular infrastructure in plants in detail, and to alter it with precision, challenges us to develop methods to quantify how these parts function. For components of metabolism, this means mapping fluxes at the level of metabolic networks. Advances in experimental, analytical and software tools for metabolic flux analysis now allow maps of the fluxes through central metabolism to be obtained from the results of stable-isotope-labeling experiments. Such maps have led to notable successes in understanding and engineering metabolic function in microorganisms. Recent studies in plants are giving insight into particular fluxes, such as those of the pentose phosphate pathway, and into general phenomena, such as substrate- or futile-cycles and compartmentation. The importance of experimental design and statistical analysis have been illustrated, and analyses of fluxes in heterotrophic plant tissues have been carried out recently.     

Rapid and accurate early-stage detection of T-DNA/plant flanking sequences of resistant kumquats

Agrobacterium-mediated genetic transformation is a widely applied tool in plant biotechnology. In this process, genes of interest are integrated into plant genomes via T-DNAs present on plasmids in Agrobacteria. Classical and standard methods for screening transformants, such as Southern blot, are inconvenient for most woodland plants because of extremely low transformation efficiency. For the purpose of identifying transgenic woody lines at early selection stages, a right-border T-DNA/plant conjunction sequence analysis was carried out. By analyzing these sequences, 15 out of 17 kanamycin-resistant kumquats were found to be integrated with foreign genes, and two or more copies were present in 33.3% of the transgenic lines, which is completely concordant with Southern blots. Moreover, T-DNA integration into plant nuclear DNA was random without any sequence hotspots, and cleavage sites are any base of the sequence ‘TGAC’. These results showed that this screening method could not only detect resistant woodland plants rapidly at the early selection stage, but unequivocally detect copy numbers. Compared with other screening technique, this method could save time and effort for conducting genetic transformation in woody plants, and also provides accurate integration information for transgenic plants.     

Investigation of Salmonella contamination and disinfection in farm egg-packing plants

AIMS: As part of a field-based study of the distribution and persistence of Salmonella infection on commercial egg-laying farms, sampling was carried out on one or more occasions in egg-packing areas of 12 farms infected with Salm. Enteritidis. METHODS AND RESULTS: Salmonellas were isolated by cultural methods. Contamination was common, with Salmonella being found in 23.1% of floor swab samples, 30.8% of grading tables, 23.1% of conveyor belts or rollers and 23.8% of candlers. Four farms were sampled after cleaning and disinfection of packing plants had been carried out on the previous day, and residual contamination was found on 6.9% of samples from grading tables, 16.0% holding/sorting tables, 12.6% of conveyors or rollers, 16.7% of vacuum egg lifters, 21.4% of floor surfaces and 5.0% of egg store floor surfaces. Sterilized eggs passed through five farm packing plants showed a contamination rate of at least 16/5,948 (0.3%) egg passages. CONCLUSIONS: It is apparent that contamination in egg-packing plants may be a significant contributory factor to external contamination of shell eggs, and improved methods of cleaning and disinfecting egg-handling equipment are required. SIGNIFICANCE AND IMPACT OF THE STUDY: The presence of Salmonella contamination in egg-packing plants presents a contamination hazard for eggs from Salmonella-free flocks. Samples from equipment in the packing plant could also be used for screening for detection of Salmonella in the throughout of the plant.