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1.
In vitro selection of Zn 2+-dependent RNA-cleaving DNAzymes with activity at 90°C has yielded a diverse spool of selected sequences. The RNA cleavage efficiency was found in all cases to be specific for Zn 2+ over Pb 2+, Ca 2+, Cd 2+, Co 2+, Hg 2+, and Mg 2+. The Zn 2+-dependent activity assay of the most active sequence showed that the DNAzyme possesses an apparent Zn 2+-binding dissociation constant of 234 μM and that its activity increases with increasing temperatures from 50–90°C. A fit of the Arrhenius plot data gave Ea = 15.3 kcal mol −1. Surprisingly, the selected Zn 2+-dependent DNAzymes showed only a modest (∼3-fold) activity enhancement over the background rate of cleavage of random sequences containing a single embedded ribonucleotide within an otherwise DNA oligonucleotide. The result is attributable to the ability of DNA to sustain cleavage activity at high temperature with minimal secondary structure when Zn 2+ is present. Since this effect is highly specific for Zn 2+, this metal ion may play a special role in molecular evolution of nucleic acids at high temperature. 相似文献
2.
Homogeneous preparations of l-threonine dehydrogenase (l-threonine: NAD + oxidoreductase, EC 1.1.1.103) from Escherichia coli K-12, after having been dialyzed against buffers containing Chelex-100 resin, have a basal level of activity of 10–20 units/mg. Added Cd 2+ stimulates dehydrogenase activity approx. 10-fold; this activation is concentration-dependent and is saturable with an activation Kd = 0.9 μM. Full activation by Cd 2+ is obtained in the absence of added thiols. The pH-activity profile of the Cd 2+-activated enzyme conforms to a theoretical curve for one-proton ionization with a p Ka = 7.85. Mn 2+, the only other activating metal ion, competes with Cd 2+ for the same binding site. Km values forl-threonine and NAD + as well as the V max for ‘demetallized’, Cd 2+-activated, and Mn 2+-activated threonine dehydrogenase were determined and compared. 相似文献
3.
Each of the four subunits in a voltage-gated potassium channel has a voltage sensor domain (VSD) that is formed by four transmembrane helical segments (S1–S4). In response to changes in membrane potential, intramembrane displacement of basic residues in S4 produces a gating current. As S4 moves through the membrane, its basic residues also form sequential electrostatic interactions with acidic residues in immobile regions of the S2 and S3 segments. Transition metal cations interact with these same acidic residues and modify channel gating. In human ether-á-go-go–related gene type 1 (hERG1) channels, Cd 2+ coordinated by D456 and D460 in S2 and D509 in S3 induces a positive shift in the voltage dependence of activation of ionic currents. Here, we characterize the effects of Cd 2+ on hERG1 gating currents in Xenopus oocytes using the cut-open Vaseline gap technique. Cd 2+ shifted the half-point (V 1/2) for the voltage dependence of the OFF gating charge–voltage (Q OFF-V) relationship with an EC 50 of 171 µM; at 0.3 mM, V 1/2 was shifted by +50 mV. Cd 2+ also induced an as of yet unrecognized small outward current ( ICd-out) upon repolarization in a concentration- and voltage-dependent manner. We propose that Cd 2+ and Arg residues in the S4 segment compete for interaction with acidic residues in S2 and S3 segments, and that the initial inward movement of S4 associated with membrane repolarization displaces Cd 2+ in an outward direction to produce ICd-out. Co 2+, Zn 2+, and La 3+ at concentrations that caused ∼+35-mV shifts in the Q OFF-V relationship did not induce a current similar to ICd-out, suggesting that the binding site for these cations or their competition with basic residues in S4 differs from Cd 2+. New Markov models of hERG1 channels were developed that describe gating currents as a noncooperative two-phase process of the VSD and can account for changes in these currents caused by extracellular Cd 2+. 相似文献
4.
The selection of modified DNAzymes represents an important endeavor in expanding the chemical and catalytic properties of catalytic nucleic acids. Few examples of such exist and to date, there is no example where three different modified bases have been simultaneously incorporated for catalytic activity. Herein, dCTP, dATP and dUTP bearing, respectively, a cationic amine, an imidazole and a cationic guanidine, were enzymatically polymerized on a DNA template for the selection of a highly functionalized DNAzyme, called DNAzyme 9-86, that catalyzed (M 2+)-independent self-cleavage under physiological conditions at a single ribo(cytosine)phosphodiester linkage with a rate constant of (0.134 ± 0.026) min −1. A pH rate profile analysis revealed p Ka's of 7.4 and 8.1, consistent with both general acid and base catalysis. The presence of guanidinium cations permits cleavage at significantly higher temperatures than previously observed for DNAzymes with only amines and imidazoles. Qualitatively, DNAzyme 9-86 presents an unprecedented ensemble of synthetic functionalities while quantitatively it expresses one of the highest reported values for any self-cleaving nucleic acid when investigated under M 2+-free conditions at 37°C. 相似文献
5.
Light induced proton efflux in intact cells of Anabaena flos-aquae is inhibited by the heavy metals Hg 2+ and Cd 2+. Furthermore, Hg 2+ and Cd 2+ reduced the 14CO 2 fixation, oxygen evolution and carbonic anhydrase activity responsible for H + efflux. 相似文献
6.
In order to characterize the potentially deleterious effects of toxic Hg 2+ and Cd 2+ on lipid membranes, we have studied their binding to liposomes whose composition mimicked erythrocyte membranes. Fluorescence
spectroscopy utilizing the concentration dependent quenching of Phen Green™ SK by Hg 2+ and Cd 2+ was found to be a sensitive tool to probe these interactions at metal concentrations ≤1 μM. We have systematically developed
a metal binding affinity assay to screen for the interactions of Hg 2+ or Cd 2+ with certain lipid classes. A biomimetic liposome system was developed that contained four major lipid classes of erythrocyte
membranes (zwitterionic lipids: phosphatidylcholine and phosphatidylethanolamine; negatively charged: phosphatidylserine and
neutral: cholesterol). In contrast to Hg 2+, which preferentially bound to the negatively charged phosphatidylserine compared to the zwitterionic components, Cd 2+ bound stronger to the two zwitterionic lipids. Thus, the observed distinct differences in the binding affinity of Hg 2+ and Cd 2+ for certain lipid classes together with their known effects on membrane properties represent an important first step toward
a better understanding the role of these interactions in the chronic toxicity of these metals. 相似文献
7.
The functionally diverse cyclic nucleotide binding domain (CNBD) superfamily of cation channels contains both depolarization-gated (e.g., metazoan EAG family K + channels) and hyperpolarization-gated channels (e.g., metazoan HCN pacemaker cation channels and the plant K + channel KAT1). In both types of CNBD channels, the S4 transmembrane helix of the voltage sensor domain (VSD) moves outward in response to depolarization. This movement opens depolarization-gated channels and closes hyperpolarization-gated channels. External divalent cations and protons prevent or slow movement of S4 by binding to a cluster of acidic charges on the S2 and S3 transmembrane domains of the VSD and therefore inhibit activation of EAG family channels. However, a similar divalent ion/proton binding pocket has not been described for hyperpolarization-gated CNBD family channels. We examined the effects of external Cd 2+ and protons on Arabidopsis thaliana KAT1 expressed in Xenopus oocytes and found that these ions strongly potentiate voltage activation. Cd 2+ at 300 µM depolarizes the V50 of KAT1 by 150 mV, while acidification from pH 7.0 to 4.0 depolarizes the V50 by 49 mV. Regulation of KAT1 by Cd 2+ is state dependent and consistent with Cd 2+ binding to an S4-down state of the VSD. Neutralization of a conserved acidic charge in the S2 helix in KAT1 (D95N) eliminates Cd 2+ and pH sensitivity. Conversely, introduction of acidic residues into KAT1 at additional S2 and S3 cluster positions that are charged in EAG family channels (N99D and Q149E in KAT1) decreases Cd 2+ sensitivity and increases proton potentiation. These results suggest that KAT1, and presumably other hyperpolarization-gated plant CNBD channels, can open from an S4-down VSD conformation homologous to the divalent/proton-inhibited conformation of EAG family K + channels. 相似文献
8.
In Schizosaccharomyces pombe, Cd 2+ shares the same uphill uptake system with Zn 2+. Both heavy metals inhibited growth, respiration, H +/glucose uptake, and glucose-induced proton extrusion, Cd 2+ being a 10–15-fold stronger inhibitor. In contrast, both had a similar effect on the plasma membrane H +-ATPase, enhancing its affinity for ATP and reducing the rate of ATP splitting. Cd 2+ caused protracted strong fluidization of the plasma membrane of energized cells, whereas deenergized cells, phosphatidylcholine
liposomes, and plasma membrane fragments, either purified or incorporated into the liposomes, exhibited only a short initial
fluidization. Zn 2+, which caused only a marginal membrane fluidization, suppressed the fluidizing action of Cd 2+. The fluidizing effect of both heavy metals on liposomes was reduced by the presence of plasma membrane fragments in the
liposome membrane. At 50 μM, Cd 2+ brought about loss K + (18 K +/1 Cd 2+) from energized, but not from deenergized cells since Cd 2+ must first accumulate in the cells before causing a detectable effect. A simple membrane disruption by external Cd 2+ is, therefore, unlikely to be the main mechanism of cadmium-induced potassium loss in intact cells. Zn 2+ had virtually no effect below 1 mM concentration, and it again weakened the K +-releasing effect of Cd 2+. Cd 2+ caused a strong loss of K + also from K +-containing liposomes, probably because of a direct interaction with liposome phospholipids. Incorporation of plasma membrane
fragments into the liposomes reduced the K + loss sixfold.
Received: 13 November 1995 / Accepted: 31 January 1996 相似文献
9.
Abscisic acid (ABA), a widely known phytohormone involved in the plant response to abiotic stress, plays a vital role in mitigating Cd2+ toxicity in herbaceous species. However, the role of ABA in ameliorating Cd2+ toxicity in woody species is largely unknown. In the present study, we investigated ABA restriction on Cd2+ uptake and the relevance to Cd2+ stress alleviation in Cd2+-hypersensitive Populus euphratica. ABA (5 μM) markedly improved cell viability and growth but reduced membrane permeability in CdCl2 (100 μM)-stressed P. euphratica cells. Moreover, ABA significantly increased the activity of the antioxidant enzymes catalase (CAT), superoxide dismutase (SOD), and ascorbate peroxidase (APX), contributing to the scavenging of Cd2+-elicited H2O2 within P. euphratica cells during the period of CdCl2 exposure (100 μM, 24–72 h). ABA alleviation of Cd2+ toxicity was mainly the result of ABA restriction of Cd2+ uptake under Cd2+ stress. Steady-state and transient flux recordings showed that ABA inhibited Cd2+ entry into Cd2+-shocked (100 μM, 30 min) and short-term-stressed P. euphratica cells (100 μM, 24–72 h). Non-invasive micro-test technique data showed that H2O2 (3 mM) stimulated the Cd2+-elicited Cd2+ influx but that the plasma membrane (PM) Ca2+ channel inhibitor LaCl3 blocked it, suggesting that the Cd2+ influx was through PM Ca2+-permeable channels. These results suggested that ABA up-regulated antioxidant enzyme activity in Cd2+-stressed P. euphratica and that these enzymes scavenged the Cd2+-elicited H2O2 within cells. The entry of Cd2+ through the H2O2-mediated Ca2+-permeable channels was subsequently restricted; thus, Cd2+ buildup and toxicity were reduced in the Cd2+-hypersensitive species, P. euphratica. 相似文献
10.
Cadmium is one of the most toxic heavy metals and is known to accumulate in freshwater food chains. The underlying mechanism
for its genotoxicity has not been investigated for any freshwater fish. It has, however, been suggested that cadmium-induced
carcinogenesis might involve either direct or indirect interaction of Cd 2+ with DNA. The interaction between Cd 2+ and DNA from the kidney of the silver crucian carp ( Carassius auratus gibelio) in vitro and in vivo is investigated by spectrophotometric methods and agarose gel electrophoresis methods. Cd 2+ could insert into DNA basepairs, bind to nucleic acid, and result in notable hypochromicities. The analysis of agarose gel
electrophoresis, proves that Cd 2+ at different concentrations does not cause DNA cleavage in vitro; however, kidneys display the classical laddering degradation
of DNA in vivo, which is the result of the promotion of deoxyribonuclease activity or inhibition of superoxide dismutase and
catalyse activity and the accumulation of reactive oxygen species caused by Cd 2+ ions in vivo. 相似文献
11.
10–23 DNAzyme has the potential to suppress gene expressions through sequence-specific mRNA cleavage. However, the dependence on exogenous delivery limits its applications. The objective of this work is to establish a replicating DNAzyme in bacteria using a single-stranded DNA vector. By cloning the 10–23 DNAzyme into the M13mp18 vector, we constructed two circular DNAzymes, C-Dz 7 and C-Dz 482, targeting the β-lactamase mRNA. These circular DNAzymes showed in vitro catalytic efficiencies ( kcat/KM) of 7.82 × 10 6 and 1.36 × 10 7 M –1·min –1, respectively. Their dependence on divalent metal ions is similar to that found with linear 10–23 DNAzyme. Importantly, the circular DNAzymes were not only capable of replicating in bacteria but also exhibited high activities in inhibiting β-lactamase and bacterial growth. This study thus provides a novel strategy to produce replicating DNAzymes which may find widespread applications. 相似文献
12.
Swiss chard ( Beta vulgaris L., cv. Fordhook Giant) was grown in nutrient solution with Cl concentrations varying between 0.01 m M and 120 m M. Solution Na concentration and ionic strength were maintained in all treatments by compensating with NaNO 3. All solutions contained Cd (50 n M, spiked with 109Cd). Three different Cd 2+ buffering systems were used. In one experiment, Cd 2+ activity was unbuffered; its activity decreased with increased Cl concentration as a result of the formation of CdCl n
2–n species. In the other experiments, Cd 2+ activity was buffered by the chelator nitrilotriacetate (NTA, 50 M) and ethylene-bis-(oxyethylenenitrilo)-tetraacetate (EGTA, 50 M) at about 10 –9
M and 10 –11
M, respectively. Plant growth was generally unaffected by increasing Cl concentrations in the three experiments. In unbuffered solutions, Cd concentrations in plant tissue decreased significantly ( p<0.01) (approximately 2.4-fold) as solution Cl concentration increased from 0.01 m M to 120 m M. However, this decrease was smaller in magnitude than the 4.7-fold decrease in Cd 2+ activity as calculated by the GEOCHEM-PC program for the same range of Cl concentrations. In solutions where Cd 2+ activity was buffered by NTA, Cd concentrations in plant tissue increased approximately 1.4-fold with increasing Cl concentration in solution, while the Cd 2+ activity was calculated to decrease 1.3-fold. In solutions where Cd 2+ activity was buffered by EGTA, Cd concentrations in the roots increased 1.3-fold with increasing Cl concentration in solution but there was no effect of Cl on shoot Cd concentrations. The data suggest that either CdCl n
2–nspecies can be taken up by plant roots or that Cl enhances uptake of Cd 2+ through enhanced diffusion of the uncomplexed metal to uptake sites.Abbreviations DAS
days after sowing
- EGTA
ethylene-bis-(oxyethylenenitrilo)-tetraacetate
- HBED
N,N-bis(2-hydroxybenzyl)-ethylenediamine-N,N-diacetate
- NTA
nitrilotriacetate 相似文献
13.
Cadmium (Cd 2+) is a known carcinogen that inactivates the DNA mismatch repair (MMR) pathway. In this study, we have tested the effect of Cd 2+ exposure on the enzymatic activity of the mismatch binding complex MSH2–MSH6. Our results indicate that Cd 2+ is highly inhibitory to the ATP binding and hydrolysis activities of MSH2–MSH6, and less inhibitory to its DNA mismatch binding activity. The inhibition of the ATPase activity appears to be dose and exposure time dependent. However, the inhibition of the ATPase activity by Cd 2+ is prevented by cysteine and histidine, suggesting that these residues are essential for the ATPase activity and are targeted by Cd 2+. A comparison of the mechanism of inhibition with N-ethyl maleimide, a sulfhydryl group inhibitor, indicates that this inhibition does not occur through direct inactivation of sulfhydryl groups. Zinc (Zn 2+) does not overcome the direct inhibitory effect of Cd 2+ on the MSH2–MSH6 ATPase activity in vitro. However, the increase in the mutator phenotype of yeast cells exposed to Cd 2+ was prevented by excess Zn 2+, probably by blocking the entry of Cd 2+ into the cell. We conclude that the inhibition of MMR by Cd 2+ is through the inactivation of the ATPase activity of the MSH2–MSH6 heterodimer, resulting in a dominant negative effect and causing a mutator phenotype. 相似文献
14.
- 1.1. The inhibition kinetics of sheep brain butyrylcholinesterase (BChE) (acylcholine acylhydrolase, EC 3.1.1.8) by Cd2+ and Zn2+ has been studied.
- 2.2. Ks has been determined as 0.14mM. Cd2+ and Zn2+ were the hyperbolic mixed-type inhibitors of BChE. Ca2+ and Mg2+ had no effect on the enzyme activity in the experimental conditions.
- 3.3. But when the enzyme was inhibited by 0.1 mM Cd2+ or Zn2+, Ca2+ and Mg2+ reactivated the inhibited form of BChE.
相似文献
15.
Bivalent metal cations are key components in the reaction of DNA synthesis. They are necessary for all DNA polymerases, being involved as cofactors in catalytic mechanisms of nucleotide polymerization. It is also known that in the presence of Mn 2+ the accuracy of DNA synthesis is considerably decreased. The findings of this work show that Cd 2+ and Zn 2+ selectively inhibit the Mn 2+-induced error-prone DNA polymerase activity in extracts of cells from human and mouse tissues. Moreover, these cations in low concentrations also can efficiently inhibit the activity of homogeneous preparations of DNA polymerase iota (Pol ?), which is mainly responsible for the Mn 2+-induced error-prone DNA polymerase activity in cell extracts. Using a primary culture of granular cells from postnatal rat cerebellum, we show that low concentrations of Cd 2+ significantly increase cell survival in the presence of toxic Mn 2+ doses. Thus, we have shown that in some cases low concentrations of Cd 2+ can display a positive influence on cells, whereas it is widely acknowledged that this metal is not a necessary microelement and is toxic for organisms. 相似文献
16.
In vitro selection of RNA-cleaving DNAzymes was performed using three heavy lanthanide ions (Ln 3+): Ho 3+, Er 3+ and Tm 3+. The resulting sequences were aligned together and about half of the library contained a new family of DNAzyme. These DNAzymes have a simple loop structure, and they are active only with the seven heavy Ln 3+. Among the tested non-lanthanide ions, only Y 3+ induced cleavage and even Pb 2+ failed to cleave, suggesting a very high specificity. A representative DNAzyme, Tm7, has a sigmoidal metal binding curve with a Hill coefficient of 3, indicating that three metal ions are involved in the catalytic step. Its pH-rate profile has a slope of 1, suggesting a single deprotonation step is involved in the rate-limiting step. Tm7 has a cleavage rate of 1.6 min −1 at pH 7.8 with 10 μM Er 3+. Phosphorothioate substitution at the cleavage junction completely inhibits the activity, which cannot be rescued by Cd 2+ alone, or by a mixture of Er 3+ and Cd 2+, suggesting that two interacting metal ions are involved in direct bonding to both non-bridging oxygen atoms. A new model involving three lanthanide ions is proposed based on this study. A biosensor is engineered using Tm7 to detect Dy 3+ down to 14 nM. 相似文献
17.
Response surface methodology (RSM) has been used to optimize the critical parameters responsible for higher Cd 2+ removal by a unicellular cyanobacterium Synechocystis pevalekii. A three-level Box–Behnken factorial design was used to optimize pH, biomass and metal concentration for Cd 2+ removal. A coefficient of determination ( R2) value (0.99), model F-value (86.40) and its low p-value ( F < 0.0001) along with lower value of coefficient of variation (5.61%) indicated the fitness of response surface quadratic model during the present study. At optimum pH (6.48), biomass concentration (0.25 mg protein ml ?1) and metal concentration (5 μg ml ?1) the model predicted 4.29 μg ml ?1 Cd 2+ removal and experimentally, 4.27 μg ml ?1 Cd 2+ removal was obtained. 相似文献
18.
In this study, bioaccumulation and heavy metal resistance of Cd 2+, Cu 2+, Co 2+ and Mn 2+ ions by thermophilic Geobacillus thermantarcticus and Anoxybacillus amylolyticus was investigated. The bacteria, in an order with respect to metal resistance from the most resistant to the most sensitive, was found to be Mn 2+ > Co 2+ > Cu 2+ > Cd 2+ for both G. thermantarcticus and A. amylolyticus. It was determined that the highest metal bioaccumulation was performed by A. amylolyticus in Mn 2+ (28,566 μg/g dry weight), and the lowest metal bioaccumulation was performed by A. amylolyticus in Co 2+ (327.3 μg/g dry weight). The highest Cd 2+ capacities of dried cell membrane was found to be 36.07 and 39.55 mg/g membrane for G. thermantarticus and A. amylolyticus, respectively, and the highest Cd 2+ capacities of wet cell membrane was found to be 14.36 and 12.39 mg/g membrane for G. thermantarcticus and A. amylolyticus, respectively. 相似文献
19.
The effect of equimolar concentrations of Hg 2+ and Cd 2+ on the whole cell absorption spectra, absorption spectra of the extracted phycocyanin (PC) and fluorescence emission spectra of phycobilisomes (PBS) was investigated in the cells of Anabaena flos-aquae. The PC component of the PBS was found to be extremely sensitive to the Hg 2+ rather than the Cd 2+ ions. Further, the results showed that Hg 2+ and Cd 2+ induced decrease in the rate of Hill activity (H 2O - DCPIP) was partially restored by the electron donor NH 2OH, not by the diphenyl carbazide. Similarly, chlorophyll a fluorescence emission in the presence of metals showed that addition of NH 2OH could effectively reverse the metal induced alterations in the fluorescence emission intensity. These results, together, suggested that Hg 2+ and Cd 2+ caused damage to the photosystems (PS) II reaction center. However, a relatively higher stimulation of the chlorophyll a emission at 695 nm with a red shift of 4.0 nm in the presence of Hg 2+, and Cd 2+ induced preferential decrease in the emission intensity at 676 nm as compared with the peak at 695 nm were indicative of the differential action of Hg 2+ and Cd 2+ on the PS II. 相似文献
20.
The mechanism of Cd 2+ on the DNA cleavage and Ce 3+ on the DNA repair in the kidney of silver crucian carp ( Carassius auratus gibelio) is investigated by agarose gel electrophoresis methods and assaying biochemical indexes. It proves that Cd 2+ induces the classical laddering degradation of DNA in vivo, but DNA cleavage is repaired after injecting with a low Ce 3+ concentration under various Cd 2+ concentrations. The DNA cleavage caused by Cd 2+ is the result of the activation of deoxyribonuclease (DNase) and accumulation of reactive oxygen species (ROS), and Cd 2+ destroys the antioxidant system, which diminishes the activities of superoxide dismutase, catalase, and peroxidase, and the
increase of the lipid peroxidation (LPO) level. However, Ce 3+ could inhibit activation of Cd 2+ on DNase activity, relieve inhibition of Cd 2+ on activities of the antioxidant enzyme, and diminish ROS accumulation. The results show that Ce 3+ could relieve the toxicity of Cd 2+ to silver crucian carp. 相似文献
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