Microcolony and biofilm formation as a survival strategy for bacteria

Bacterial communities such as biofilms are widely recognized as being important for survival and persistence of bacteria in harsh environments. Mechanistic models of biofilm growth indicate that the way in which the surface is seeded can effect the morphology of simulated biofilms. Experimental studies indicate that genes which are important for chemotaxis also influence biofilm formation, perhaps by influencing aggregation on a surface. Understanding aggregation and microcolony formation could therefore help clarify factors influencing biofilm formation and illuminate how groups influence the fitness of bacteria. In this paper I develop an individual based model to examine how different behaviors involved in microcolony formation on a surface determine patterns of group sizes and link patterns to bacterial fitness.     

鲍曼不动杆菌生物被膜形成和菌体形态变化的研究

目的观察鲍曼不动杆菌能否以生物被膜菌的方式存在。方法采用平板改良法,分别于24h、2d、3d、5d和7d五个时间点,用扫描电镜观察硅胶膜上是否有鲍曼不动杆菌附着并形成生物被膜。结果鲍曼不动杆菌可以生物被膜菌的方式存在,第3天时在硅胶膜上生物被膜成熟。同时发现细菌形态在被膜形成后发生改变。结论鲍曼不动杆菌可以生物被膜菌的形式存在。     

Effect of temperature on biofilm formation by Antarctic marine bacteria in a microfluidic device

Polar biofilms have become an increasingly popular biological issue because new materials and phenotypes have been discovered in microorganisms in the polar region. Various environmental factors affect the functionality and adaptation of microorganisms. Because the polar region represents an extremely cold environment, polar microorganisms have a functionality different from that of normal microorganisms. Thus, determining the effective temperature for the development of polar biofilms is crucial. Here, we present a simple, novel one-pot assay for analysis of the effect of temperature on formation of Antarctic bacterial biofilm using a microfluidic system where continuous temperature gradients are generated. We find that a specific range of temperature is required for the growth of biofilms. Thus, this microfluidic approach provides precise information regarding the effective temperature for polar biofilm development with a new high-throughput screening format.     

生物膜定量分析仪对不同细菌早期生物膜形成能力的比较研究

目的通过生物膜定量分析仪来观察铜绿假单胞菌(Pseudomonas aeruginosa PAO1),变形链球菌(Streptococcus mutans UA159)以及大肠埃希菌(Escherichia coli MG1655)生物膜形成能力的不同,并以各菌株的吸光度值A600为参考,对3种菌株早期生物膜形成能力进行比较。方法通过向生物膜培养悬液中加入与细菌直径相近的磁性小珠,利用这些小珠在磁场中受到生物膜的位移约束力的原理,采用生物膜定量分析仪,定量比较3种菌株在生物膜形成上的差别。结果实验发现铜绿假单胞菌PAO1和大肠埃希菌MG1655的细菌增长速度基本相同,但铜绿假单胞菌PAO1的生物膜形成明显快于大肠埃希菌MG1655。大肠埃希菌MG1655和变形链球菌UA159的生物膜形成速度基本相同,但大肠埃希菌MG1655的细菌增长速度明显高于变形链球菌UA159。结论不同细菌有各自的生物膜形成模式。生物膜定量分析仪作为一种高效简便的检测手段,可用于生物膜早期形成的动态分析。     

长期留置管细菌分布及生物膜形成能力调查

目的了解长期留置管细菌分布及生物膜形成能力。方法10％血清肉汤振荡培养留置管中细菌,常规生化和分子生物学方法鉴定分离菌,结晶紫半定量法检测分离菌生物膜形成能力。结果留置管细菌检出率为49．1％（53／108）;共分离60株菌,以葡萄球菌分离率最高（70．0％）,其次为肠球菌（15．O％）和大肠埃希菌（6．7％）;所有分离菌均具有生物膜形成能力,其中38株（63．3％）具有较强的生物膜形成能力。结论长期留置管细菌检出率较高,大部分分离菌具有较强的生物膜形成能力。     

冬凌草甲素对金黄色葡萄球菌生物膜的抑制机制

【背景】金黄色葡萄球菌是一种常见的食源性致病菌,易在食品及加工器具表面形成生物膜,引起食品腐败和疾病的传播,威胁食品安全。【目的】研究冬凌草甲素抑制金黄色葡萄球菌生物膜形成的作用机制。【方法】使用结晶紫染色法和扫描电镜观察冬凌草甲素对金黄色葡萄球菌生物膜形成的抑制作用,刚果红平板法定性检测冬凌草甲素对细胞间多糖黏附素(polysaccharideintercellular adhesion,PIA)合成的影响,分光光度法测定冬凌草甲素对供试菌株胞外DNA (eDNA)释放量的影响,RT-PCR技术检测冬凌草甲素对供试菌株ica A、cid A、agr A和sar A基因表达量的影响。【结果】冬凌草甲素对金黄色葡萄球菌生物膜形成有较强的抑制作用;冬凌草甲素能显著抑制PIA的合成,且呈浓度剂量依赖;冬凌草甲素能抑制供试菌株e DNA的释放量,其中1/4最小抑菌浓度(minimum inhibitory concentration,MIC)的冬凌草甲素作用金黄色葡萄球菌16 h后,与对照组相比,e DNA的释放量降低了48.62%;冬凌草甲素可显著抑制金黄色葡萄球菌生物膜形成相关基因的表达,其中1/2MIC的冬凌草甲素作用金黄色葡萄球菌16 h后,ica A、cid A、agr A和sar A基因的表达量分别比对照降低了91.6%、94.7%、77.6%和70.4%。【结论】冬凌草甲素通过抑制ica A和cid A基因的表达,影响PIA的合成和eDNA的释放,进而干预生物膜的形成。     

Doxycycline interferes with quorum sensing-mediated virulence factors and biofilm formation in Gram-negative bacteria

Inhibition of quorum sensing (QS)-regulated virulence factors including biofilm is a recognized anti-pathogenic drug target. The search for safe and effective anti-QS agents is expected to be useful to combat diseases caused by multidrug-resistant bacteria. In this study, effect of a commonly used antibiotic, doxycycline on QS was evaluated using sensor strains of Chromobacterium violaceum (ATCC 12472 and CVO26) and Pseudomonas aeruginosa PAO1. Sub-MICs of doxycycline reduced QS-controlled violacein production in C. violaceum to a significant degree (70 %) and showed a significant reduction of LasB elastase (67.2 %), pyocyanin (69.1 %), chitinase (69.8 %) and protease (65 %) production and swarming motility (74 %) in P. aeruginosa PAO1 over untreated controls. Similar results were also recorded against a clinical strain of P. aeruginosa (PAF-79). Interestingly, doxycycline at respective sub-MICs (4 and 32 μg ml^?1) significantly reduced the biofilm-forming capability and exopolysaccharide production in both the strains of P. aeruginosa (PAO1 and PAF-79) over untreated controls. The results of this study highlight the multiple actions of doxycycline against QS-linked traits/virulence factors and its potential to attenuate virulence of P. aeruginosa.     

Inhibition of biofilm formation on silicone rubber samples using various antimicrobial agents

High-temperature-cured silicone rubber samples (silicone rubber (SIR) based on polydimethylsiloxane (PDMS)) and SIR samples containing three different antimicrobial agents, sodium benzoate (NaB), DCOIT (4,5 Dichloro-2-octyl-2H-isothiazolone-one) and p-aminobenzoic acid (PABA) were inoculated with fungal spore suspensions and incubated for 28 days at 29 ± 1 °C and ≥90% humidity, according to the ISO 846:1997(E) protocol. Prior to the biodegradation test, a powder test was conducted to study the efficacy of the chosen antimicrobial compounds and to determine the correct concentration of the compounds for sample preparation. The extent of the microbial growth was studied visually and by Scanning Electron Microscopy (SEM). Changes in surface hydrophobicity and surface chemical composition were studied by contact angle measurements and Fourier Transform Infrared (FTIR) spectroscopy, respectively. Microbial growth and biofilm formation were observed on the surface of reference samples. DCOIT was the most effective antimicrobial agent, as demonstrated by the lack of microbial growth and unaltered surface hydrophobicity. On the surface of samples containing NaB, an initiation of microbial growth and therefore a slight change in surface hydrophobicity was observed. PABA did not inhibit the fungal growth.     

Bicyclic brominated furanones: A new class of quorum sensing modulators that inhibit bacterial biofilm formation

Both natural and synthetic brominated furanones are known to inhibit biofilm formation by bacteria, but their toxicity to mammalian cells is often not reported. Here, we designed and synthesized a new class of brominated furanones (BBFs) that contained a bicyclic structure having one bromide group with well-defined regiochemistry. This class of molecules exhibited reduction in the toxicity to mammalian cells (human neuroblastoma SK-N-SH) and did not inhibit bacteria (Pseudomonas aeruginosa and Escherichia coli) growth, but retained the inhibitory activity towards biofilm formation of bacteria. In addition, all the BBFs inhibited the production of virulence factor elastase B in P. aeruginosa. To explore the effect of BBFs on quorum sensing, we used a reporter gene assay and found that 6-BBF and 7-BBF exhibited antagonistic activities for LasR protein in the lasI quorum sensing circuit, while 5-BBF showed agonistic activity for the rhlI quorum sensing circuit. This study suggests that structural variation of brominated furanones can be designed for targeted functions to control biofilm formation.     

李斯特菌生物被膜形成的调控

单核细胞增生李斯特菌(Listeria monocyiogenes)能引起人和动物脑膜炎、败血症、流产和单核细胞增多等症状,临床发病率在美国和欧洲等西方发达国家大约为2-8例/10万人,死亡率20％-30％或更高,被WHO列为关系食品卫生安全的重要病源细菌之一一[1-2].该菌能在多数固体表面形成生物被膜,在食品生产、加工、运输和保藏过程中,一旦发生细菌感染并形成生物被膜便难以将其彻底清除,严重威胁着食品卫生安全[3],但其生物被膜形成的具体分子机制尚不清楚[4].     

Human probiotic bacteria attenuate Pseudomonas aeruginosa biofilm and virulence by quorum-sensing inhibition

Abstract

This work investigated chloroform extracts from culture supernatants of two human probiotic bacteria, Lactobacillus casei CRL 431 and Lactobacillus acidophilus CRL 730 for the production of virulence factors and quorum sensing (QS) interference against three Pseudomonas aeruginosa strains. Both extracts inhibited biofilm biomass (up to 50%), biofilm metabolic activity (up to 39%), the production of the enzyme elastase (up to 63%) and pyocyanin (up to 77%), and decreased QS, without presenting any antibacterial acgivity. In addition, the chloroform extracts of both strains disrupted preformed biofilms of the three strains of P. aeruginosa analyzed (up to 40%). GC-MS analysis revealed that the major compounds detected in the bioactive extracts were four diketopiperazines. This study suggests that the metabolites of L. casei and L. acidophilus could be a promising alternative to combat the pathogenicity of P. aeruginosa.     

利用转座子Tn917构建单核细胞增生李斯特菌菌膜形成突变株

单核细胞增生李斯特菌菌膜形成相关基因和调控因子的分离和鉴定是阐明其菌膜形成分子机理的基础。利用原生质体转化这一方式,将带有转座子Tn917的质粒pTV1OK成功地转进了单核细胞增生李斯特菌。通过诱导Tn917转座,得到单核细胞增生李斯特菌Tn917插入突变库,转座率为10-7。经96孔细胞培养板筛选发现,菌株LM49形成菌膜能力明显大于野生型。该菌株在细胞培养板中培养４d后形成的紫色圆环的颜色明显深于野生型。用Tn917特异引物进行PCR扩增,结果显示只有以该突变株的DNA为模板才能得到相应大小的扩增产物,证实该菌株基因组中有Tn917插入。Tn917的插入使菌株LM49的菌膜形成能力增强。     

Common beta-lactamases inhibit bacterial biofilm formation

Beta-lactamases, which evolved from bacterial penicillin-binding proteins (PBPs) involved in peptidoglycan (PG) synthesis, confer resistance to beta-lactam antibiotics. While investigating the genetic basis of biofilm development by Pseudomonas aeruginosa, we noted that plasmid vectors encoding the common beta-lactamase marker TEM-1 caused defects in twitching motility (mediated by type IV pili), adherence and biofilm formation without affecting growth rates. Similarly, strains of Escherichia coli carrying TEM-1-encoding vectors grew normally but showed reduced adherence and biofilm formation, showing this effect was not species-specific. Introduction of otherwise identical plasmid vectors carrying tetracycline or gentamicin resistance markers had no effect on biofilm formation or twitching motility. The effect is restricted to class A and D enzymes, because expression of the class D Oxa-3 beta-lactamase, but not class B or C beta-lactamases, impaired biofilm formation by E. coli and P. aeruginosa. Site-directed mutagenesis of the catalytic Ser of TEM-1, but not Oxa-3, abolished the biofilm defect, while disruption of either TEM-1 or Oxa-3 expression restored wild-type levels of biofilm formation. We hypothesized that the A and D classes of beta-lactamases, which are related to low molecular weight (LMW) PBPs, may sequester or alter the PG substrates of such enzymes and interfere with normal cell wall turnover. In support of this hypothesis, deletion of the E. coli LMW PBPs 4, 5 and 7 or combinations thereof, resulted in cumulative defects in biofilm formation, similar to those seen in beta-lactamase-expressing transformants. Our results imply that horizontal acquisition of beta-lactamase resistance enzymes can have a phenotypic cost to bacteria by reducing their ability to form biofilms. Beta-lactamases likely affect PG remodelling, manifesting as perturbation of structures involved in bacterial adhesion that are required to initiate biofilm formation.     

Influence of magnesium ions on biofilm formation by Pseudomonas fluorescens

Mg²⁺ can potentially influence bacterial adhesion directly through effects on electrostatic interactions and indirectly by affecting physiology-dependent attachment processes. However, the effects of Mg²⁺ on biofilm structure are largely unknown. In this study, Pseudomonas fluorescens was used to investigate the influence of Mg²⁺ concentration (0, 0.1 and 1.0 mM MgCl₂) on biofilm growth. Planktonic and attached cells were enumerated (based on DAPI staining) while biofilm structures were examined via confocal laser scanning microscopy and three-dimensional structures were reconstructed. Mg²⁺ concentration had no influence on growth of planktonic cells but, during biofilm formation, Mg²⁺ increased the abundance of attached cells. For attached cells, the influence of Mg²⁺ concentration changed over time, suggesting that the role of Mg²⁺ in bacterial attachment is complex and dynamic. Biofilm structures were heterogeneous and surface colonization and depth increased with increasing Mg²⁺ concentrations. Overall, for P. fluorescens, Mg²⁺ increased initial attachment and altered subsequent biofilm formation and structure.     

Activity of caffeic acid derivatives against Candida albicans biofilm

The aim of this study was to evaluate the caffeic acid (1) and ester derivatives (2–10) against Candida albicans biofilm and to investigate whether these compounds are able to inhibit the biofilm formation or destroy pre-formed biofilm.Caffeic acid ester 7, cinnamic acid ester 8 and 3,4-dihydroxybenzoic acid ester 10 are more active than fluconazole, used as reference drug, both on biofilm in formation with MIC₅₀ values of 32, 32 and 16 μg/mL, respectively, and in the early stage of biofilm formation (4 h) with MIC₅₀ values of 64, 32 and 64 μg/mL, respectively. These esters result also more active than fluconazole on mature biofilm (24 h), especially 8 and 10 with MIC₅₀ values of 64 μg/mL.     

新型氟喹诺酮衍生物对水产致病菌及其生物被膜的抑制作用研究北大核心

【目的】细菌的耐药性给动物抗感染和疾病治疗带来了极大的困难和挑战,生物被膜是导致细菌耐药性的主要原因之一,本研究检测分析了氯丙酰基克林沙星对7株菌株的抗菌活性及其生物被膜形成能力,以期发现氯丙酰基克林沙星是否具有抗菌活性。【方法】本研究通过打孔法和微量肉汤二倍稀释法进行常规药敏试验以测定最小抑菌浓度(minimum inhibitory concentration,MIC)和最小杀菌浓度(minimum bactericidal concentration,MBC),通过结晶紫染色法检测这7株受试菌在药物亚抑菌浓度下的生物被膜形成能力以及生长速率来测定氯丙酰基克林沙星的抑菌能力。【结果】实验结果显示,氟喹诺酮类衍生物氯丙酰基克林沙星药物对4株受试革兰氏阴性菌的MIC≤10 mg/L、MBC≤48 mg/L,对3株受试革兰氏阳性菌也呈现敏感状态(MIC≤10 mg/L,MBC≤10 mg/L)。结晶紫染色法检测发现,这7株受试菌在药物亚抑菌浓度下的生物被膜形成能力以及生长速率显著下降,说明氯丙酰基克林沙星在亚抑菌浓度即具有良好的抑菌活性。【结论】本研究证明氯丙酰基克林沙星可用作抗菌剂,并为新型生物被膜抗菌剂或细菌感染治疗药物的开发提供了新的依据。     

环境因子对鳗弧菌生物膜形成的影响

【背景】鳗弧菌是海产动物弧菌病的主要病原,在海水水域中广泛存在。鳗弧菌为了适应环境变化会生成生物膜,形成自我保护,对其防治是水产养殖行业的一大难题。【目的】探讨致病性鳗弧菌(Vibrio anguillarum)BYK0638生物膜的形成特性,为进一步研究鳗弧菌生物膜形成机制和致病机理提供参考。【方法】采用改良的微孔板法研究静置培养条件下鳗弧菌(V.anguillarum)BYK0638在96孔酶标板上的成膜情况,CCK-8法(Cell counting kit-8)定量检测生物膜中鳗弧菌的活力。【结果】鳗弧菌BYK0638能够在聚苯乙烯酶标板上形成稳定而明显的生物膜,其生物膜的OD450值在24 h达到峰值,60 h后趋于稳定;在107-108 CFU/m L范围内,鳗弧菌生物膜的OD450值显著高于其他试验组(P0.05);25°C时的生物膜OD450值显著高于其他温度生物膜的形成量;在p H 4.0-11.0范围内,当p H值为7.0时鳗弧菌形成的生物膜量最高,在p H值为3.0和12.0时鳗弧菌几乎不形成生物膜;在TSB培养基中加入0.03-2.00 mmol/L Ca Cl2,鳗弧菌生物膜形成量与未添加Ca Cl2对照组无显著性差异;在TSB培养基中加入0.03 mmol/L Mg Cl2,可促进鳗弧菌生物膜形成;Na Cl浓度为5%时,形成的生物膜OD450值最高;鳗弧菌在大黄鱼表皮黏液、肝脏、前肠、后肠组织提取液包被的96孔酶标板上形成的生物膜显著高于其他黏液和组织提取液包被组(P0.05)。【结论】致病性鳗弧菌BYK0638能形成稳定而明显的生物膜,其生物膜形成与外界环境因子变化有密切的关系,培养时间、初始菌浓度、温度、p H、Mg2+、盐度及不同组织和黏液等各种环境因子均能显著影响鳗弧菌生物膜的形成。