Structure of the mitochondrial genome of Beta vulgaris L.

Summary The structure of mitochondrial DNA (mt-DNA) from sugarbeet (Beta vulgaris L.) has been studied by biochemical methods and electron microscopy. It was found to be complex multipartite consisting of two main classes of molecules: high molecules weight (HMW) mtDNA and low molecular weight (LMW) mtDNA. The HMW mtDNA consists of rosette-like structures and globules resembling chromomeres (150–200nm). A typical rosette has a protein core and radially stemming closed DNA loops (from 0.6-1.5 m). The number of loops in a rosette varies from 16–30. The bulk of HMW mtDNAs are represented by interconnected rosettes (total contour length about 130–160 m, 403–496 kbp). Such large circular DNAs may be evidence of the master chromosome arrangement of the sugarbeet genome. Globules and rosettes are interconnected by thick and thin DNA fibrils, along which nucleosome- and nucleomere-like structures are distributed. The LWM mtDNA is composed of two groups of supercoiled circular molecules, 0,2–1.5 m and 0.02–0.05 m in size. Electrophoretic analysis demonstrated that LWM mtDNA is represented by minicircle plasmid-like DNA molecules of 1.3, 1.4 and 1.6 kbp.     

Method of isolation of cysteine constitutive mutants of the cysteine regulon in Salmonella typhimurium.

Summary Size and shape of mitochondrial DNA molecules of Schizosaccharomyces pombe were analyzed by electron microscopy. Besides numerous linear molecules, circular molecules ranging from 0.83 m to 12.81 m were found. Depending on the method of preparation, both closed and open circular molecules were found. Most of the circular molecules could be assigned to five major size classes of 0.83±0.05 m, 1.7±0.05 m, 4.74±0.04 m, 5.74±0.04 m, and 8.32±0.07 m. Possible explanations for the different size classes of mitochondrial DNA molecules are discussed.     

Circular mitochondrial DNA from Xenopus laevis and Rana pipiens

Mitochondrial DNA from oocytes of Xenopus laevis and Rana pipiens and from the liver of Gallus domesticus was studied by electron microscopy using the Kleinschmidt technique. A high percentage of circular molecules, either highly twisted or open, was observed in all preparations. The mean contour length of circles from X. laevis was 5.40 , from R. pipiens 5.56 and from G. domesticus 5.26 . Highly twisted circles were found in greater abundance in a fresh preparation than in preparations left standing for 3 months. These molecules are considered to be the native form of mitochondrial DNA.     

Intracellular location of small circular DNA complexes in mammalian cell lines

For determination of the cellular location of small polydisperse circular DNA complexes, rat myoblastic L6 cells, HeLa cells, and mouse L cells were enucleated and processed by the micapress-adsorption method for electron microscopy (H. Yamagishi, T. Kunisada, and T. Tsuda, 1982, Plasmid8, 299–306). Small circular DNA complexes from intact cells showed a heterogeneous size distribution of from 0.1 to more than 2 μm with a mean contour length of 0.6 to 0.8 μm, like that of covalently closed circular DNAs. Cells contained 400 to 1200 copies. The size distribution in the cytoplasts was narrow and the number-average length was 0.3 to 0.4 μm, whereas that in L6 karyoplasts was wide and the average length was 0.9 μm. The longer circular complexes appeared to be absent from the cytoplasts. The origin and biological functions of these complexes are discussed in relation to the cellular locations of the complexes.     

The specific activity of ribulose-1,5-bisphosphate carboxylase in relation to genotype in wheat

The specific activity of ribulose-1,5-bisphosphate carboxylase (RuBPCase; EC 4.1.1.39) in crude extracts of leaves from euploid, amphiploid and alloplasmic lines of wheat fell into high or low categories (3.75 or 2.70 mol·mg^–1·min^–1, 30°C). For the alloplasmic lines, where the same hexaploid nuclear genome was substituted into different cytoplasms, the specific activity of RuBPCase was consistent with the type of cytoplasm (high for the B and S cytoplasms and low for the A and D cytoplasms). There was no evidence from the euploid and amphiploid lines that small subunits encoded in different nuclear genomes influenced the specific activity. High specific activity was conferred by possession of the chloroplast genome of the B-type cytoplasm which encodes the large subunit of RuBPCase. All lines with a cytoplasm derived from the Sitopsis section of wheat, with the exception of Aegilops longissima and A. speltoides 18940, had RuBPCase with high specific activity. In contrast with the euploid lines of A. longissima, the alloplasmic line containing A. longissima cytoplasm from a different source had RuBPCase with high specific activity. The difference in specific activity found here in-vitro was not apparent in-vivo when leaf gas exchange was measured.Abbreviation RuBP(Case) ribulose-1,5-bisphosphate (carboxylase)     

Localization and Organization of the Translational Apparatus in Mitochondrial Membranes of Astasia longa

In isolated mitochondrial membranes of Astasia longa, large and small circular substructures were observed with diameters of 1.30 and 0.35 m and thickness of 0.08 and 0.03 m, respectively. Such substructures were isolated by membrane treatment with proteolytic enzymes (proteinase K, trypsin) or by lipid solubilization with Triton X-100. After the removal of surface protein layer, we uncovered circular polyribosomes with similar diameters as those of original substructures. Polyribosomes were identified on the basis of their morphology, positive staining with uranyl acetate, a capacity for chloramphenicol-sensitive incorporation of ¹⁴C-amino acids into polypeptides, and from their buoyant density as estimated by equilibrium centrifugation in the CsCl density gradient. The conclusion is that, in mitochondrial membranes of A. longa, the translational apparatus is organized similarly to that in the membranes of chloroplasts and cyanobacteria, e.g., large and small circular polyribosomes situated within the membrane ring-shaped substructures are the basics for the formation of the latter.     

Properties of two conjugative plasmids mediating tetracycline resistance, raffinose catabolism and hydrogen sulfide production in Escherichia coli.

Summary The tetracycline resistance (Tc) and raffi nose-hydrogen sulfide (Raf-Hys) characters of Escherichia coli D1021 are located on two compatible, conjugative fi^– plasmids named pRSDI and pRSD2, respectively. These were transferred together or separately to the isogenic background of E. coli K12 and isolated as transconjugants. Plasmid molecules isolated as covalently closed circular DNA have been analysed by buoyant density centrifugation, sucrose gradient sedimentation and electron microscopy. pRSDI (Tc) showed a buoyant density of 1.716 g/cm³ (56% GC), the open circular (OC) form had a sedimentation coefficient of 37s. If grown without tetracycline prior to isolation the contour length of most pRSDI molecules was 14.6 (±0.1) m (30.3 × 106 daltons) with a minor species of 13.9 (± 0.1) m owing to a small deletion. Pronounced length variation of pRSDI by growth in the presence of tetracycline owing to gene amplification is subject of a subsequent paper. In contrast, pRSD2 (Raf-Hys) molecules are stable under all conditions tested. The buoyant density was 1.713 g/cm³ (53% GC), the sedimentation coefficient of OGDNA was 58s and the contour length was 40.2 ± 0.6 m (83 × 106 daltons). During exponential growth one copy of pRSD2 per chromosome was found indicating stringent control of plasmid replication. At the onset of stationary growth the copy number rose from one to four per host chromosome indicating relaxation of the replication control. The level of plasmid-coded -galactosidase increases with copy numbers and has been used to test the gene dosage.     

A bacteriocinogenic factor of Enterobacter cloacae

Summary Enterobacter cloacae strain DF13 produces a bacteriocin which is able to kill other strains of Enterobacter and Klebsiella. This property can be transmitted to Enterobacter cloacae strain O 2 (up to 90% of the acceptor population became bacteriocinogenic), to E. coli K12F^- and E. coli K 12 Hfr. Transfer of chromosome material was never observed, suggesting that the production of the bacteriocin is determined by a plasmid. However all attempts to eliminate this plasmid failed. The plasmid F trp cys Col B Col V could be transferred from E. coli into Ent. cloacae DF13 and subsequently it could be eliminated by acridine orange treatment. Ent. cloacae DF13 harbours in addition two independently transferable R-factors, one determining resistance against streptomycin and sulfanilamide and the other resistance against penicillin.Most but not all Ent. cloacae O2 recombinants which have received only the bacteriocinogenic factor upon conjugation with Ent. cloacae DF 13, can transfer this property to Ent. cloacae O2 but not to E. coli. E. coli F^- recombinants, which have received only the bacteriocinogenic factor cannot transfer this property. The results suggest that the bacteriocinogenic factor cannot mediate its own transfer, but can be transferred when another transmissible plasmid is present. This may be the R(str sul) factor, the F-factor in E. coli Hfr or a transfer factor () in Ent. cloacae O2.Closed circular DNA molecules were selectively isolated from these strains and investigated by electron microscopy and velocity sedimentation. Ent. cloacae DF13 harbours small closed circular DNA molecules ranging from 0.5 to 3.2 in contour length, 98% of which corresponds to a size class of 0.7±0.1 . Ent. cloacae O2 also harbours closed circular DNA ranging from 0.8 to 3.0 in contour length, with major size classes of 0.9 and 1.4 respectively. Circular DNA of a contour length of 3.0±0.2 (S_20,w=26 S) corresponding to a molecular weight of 6.0×10⁶ daltons was transferred to E. coli and Ent. cloacae O 2 concomitantly with the ability to produce the bacteriocin. A significant difference was observed in the number of copies of the plasmid between Ent. cloacae and E. coli.     

Saccharomyces cerevisiae 2-mum DNA. An analysis of the monomer and its multimers by electron microscopy.

Summary The non-tandem inverted duplication in the 2-m DNA of Saccharomyces cerevisiae has a length of 0.19 m and is located asymmetrically along the molecule. The majority of the dumb-bell structures that are formed upon denaturation and selfannealing of the 2-m monomer consists of the renatured inverted duplication sequences as double stranded stem and two single stranded loops of 0.67 m±0.06 m (S-loop) and 0.86 m±0.05 m (L-loop) length. Two additional size classes which comprised 5–10% of the measured molecules had contour lengths of around 1.7 m and 2.1 m. The smaller dumb-bells contained two S-loops and the larger dumb-bells contained two L-loops as was shown by heteroduplex mapping with an HindIII fragment from the L-loop. Two models which assume illegitimate or site specific recombination, are presented to explain the generation of double S-loop and double L-loop molecules. At least part of the 4-m and 6- circular molecules present in the yeast supercoiled DNA fraction are shown to be dimers and trimers of 2-m monomers, but often with inverted loop segments most probably due to intramolecular recombination between sequences of the inverted duplication.2-m DNA is used to indicate the supercoiled DNA fraction although in our measurements the average monomeric length is 1.9 mPart of this work has been presented at the Conference: The Genetics and Biogenesis of Chloroplasts and Mitochondria, Munich, August, 1976     

Radiation-induced nonhomoeologous wheat-Agropyron intermedium chromosomal translocations conferring resistance to leaf rust

Summary The Agropyron intermedium chromosome 7Ai #2 is the source of the leaf rust resistance gene Lr38 which was transferred to wheat by irradiation. The chromosomal constitutions of eight radiation-induced rust-resistant wheat-Agropyron intermedium derivatives were analyzed by C-banding and genomic in-situ hybridization (GISH). Five lines were identified as wheat Ag. intermedium chromosome translocation lines with the translocation chromosomes T2AS·2AL-7Ai#2L, T5AL · 5AS-7Ai # 2L, T1DS · 1DL-7Ai # 2L, T3DL · 3DS-7Ai#2L, and T6DS · 6DL-7Ai#2L. The sizes of the 7Ai#2L segments in mitotic metaphases of these translocations are 2.42 m, 4.20 m, 2.55 m, 2.78 m, and 4.19 m, respectively. One line was identified as a wheat-Ag. intermedium chromosome addition line. The added Ag. intermedium chromosome in this line is different from 7Ai # 2. This line has resistance to leaf rust and stem rust. Based on the rust reactions, and the C-banding and GISH results, the remaining two lines do not contain any Ag. intermedium-derived chromatin.     

Mitochondrial DNA diversity in the genera of Triticum and Aegilops revealed by southern blot hybridization

Summary Southern blot hybridization of total DNA to defined mitochondrial DNA sequences provides a sensitive assay for mtDNA variation in the genera of Triticum and Aegilops. A clear distinction between cytoplasms of tetraploid species sharing the AG haploid genome is reported for the first time. The Sitopsis section of the genus Aegilops showed the most extensive intra- and inter-specific variation, whereas no variation could be detected among the cytoplasms of polyploid Triticum species (wheats) sharing the AB haploid genome. Extensive cytoplasmic intraspecific diversity was revealed in Ae. speltoides.     

Electron microscopic analysis of the yeast mitochondrial DNA segment conferring chloramphenicol resistance

Summary Mitochondrial DNAs from six ^- mutants carrying the genetic locus Ribl and deleted for the rest of the genome were analyzed. Distribution of circular molecules from one mutant followed exactly the frequency rule, 1/n, for multimers with discreet classes n, 2n, 3n, etc. Another, genetically unstable mutant displayed a continuous spectrum of circular molecules of various lengths. Four other mutants contained multiple series of circular molecules. Partial denaturation maps show that the mutants analyzed show a common segment ca. 1.0 m long and differ by characteristic deletions of extremites of this segment. Short terminal deletions of the right i.e. pointing towards the Rib3 locus, terminus of this segment are correlated with modifications of the recombination properties related to the locus.     

New cytoplasmic male sterility sources in common wheat: Their genetical and breeding considerations

Summary Nuclei from Triticum aestivum L. cultivars Penjamo 62 and Siete Cerros 66 were introduced into the cytoplasms of different species of Aegilops and some subspecies (varieties) of T. dicoccoides by backcrossing. The sterile alloplasmic lines obtained were compared with the normal cultivars used as the recurrent pollen parents. According to the cytoplasmic effect, these cytoplasms were subdivided into three main groups. The first group possesses C^u type cytoplasm, the second one possesses M type and the third group includes S, C and G type. Promising male sterile cytoplasms for hybrid wheat production were found in Ae. mutica, Ae. triuncialis and T. dicoccoides var. spontaneovillosum. Based on these results and other information some conjectures were made concerning hybrid wheat breeding and phylogenetic differentiations of the cytoplasm.     

Circular and linear structures in chromatin diminution of Cyclops

In confirmation of earlier findings, surface-spread early diminution stages of Cyclops furcifer and C. divulsus yield numerous chromatin rings formed by the 25-to 30-nm type of fiber. Their contour lengths have a range of 0.6 16 m in C. divulsus and 0.4–40 m in C. furcifer. Employing the Miller spreading technique nucleosomal chromatin rings were detected in the critical stages of diminution in a size range of 0.6–100 m, though in lower frequencies. Instead, linear fragments of nucleosomal chromatin were found in numbers equal to or surpassing that of the rings.     

Isolation of DNA from single microsurgically excised bands of polytene chromosomes of Chironomus

A method is described for excising by a glass knife single bands of isolated polytene chromosomes of the salivary glands of Chironomus tentans larvae. DNA strands were isolated from cut-out bands and their contour lengths were determined on electron micrographs. The mean contour length of DNA strands isolated from the double band I-8A was about twice that of the single band I-11B, namely 63 versus 34 m. The described method may be applicable for molecular studies on single bands (e.g., by DNA cloning).     

Plant regeneration via somatic embryogenesis in Styrian pumpkin: cytological and biochemical investigations

Somatic embryo formation was induced from cotyledon explants of Styrian pumpkin (Cucurbita pepo L. subsp. pepo var. styriaca Greb.) by using a solid MS medium supplemented with 16.11M NAA and 4.44M BA or 26.85M NAA and 13.32M BA. The callus proliferation was more efficient on medium supplemented with 26.85M NAA and 13.32M BA. In contrast, the embryogenic response was higher on medium with lower concentrations of growth regulators (16.11M NAA and 4.44M BA). The time needed for embryo induction did not depend on medium composition. Embryos in globular stage were transferred to three different maturation media, containing 2.89M GA₃ in combination with 0.54M NAA, 11.42M IAA and growth regulator-free medium. The germination rate was the highest when embryos were cultured on medium with 11.42M IAA. Plantlets grown on this medium achieved maturity suitable for transplantation into soil within 9 to 10weeks. The regenerated plants were successfully transferred into field and developed fertile flowers and set fruits. Biochemical analysis showed significant lower total glutathione levels among in vitro grown plantlets compared to seedlings grown in soil. When the plantlets were transferred into soil, they reached a normal size within a month and the glutathione concentration was comparable to seed-derived plants at the same developmental stage. Transmission electron microscopy was used to investigate possible differences in the ultrastructure of cells from callus cultures, and leaf cells of regenerated and seed-derived plants. Differences in the ultrastructure were found within chloroplasts which contained only single thylakoids, large starch grains and small plastoglobuli in callus cells in comparison to leaf cells, which possessed a well developed thylakoid system, small starch grains and large plastoglobuli.     

Differential filtration studies of carbon flux from living algae to microheterotrophs,microplankton size distribution and respiration in Lake Kinneret

The flux of newly photosynthetically fixed, dissolved organic carbon (PDOC) from phototrophs to microheterotrophs in Lake Kinneret was examined by differential (3 and 0.4m) filtration after samples were incubated with¹⁴C-bicarbonate for 3 hours (in the light) and subsequently for 21 hours (in darkness). Only a small proportion (average about 10%) of the carbon fixed from¹⁴C-bicarbonate in the light was associated with particulate matter <3m. In 14 out of 16 experiments there was no significant decrease in the relative proportion of radioactivity associated with larger (>3m) organisms after the dark period, suggesting that the amount of PDOC taken up by unclumped, single bacteria (<3m) was not very great. Respiration rates, estimated by the decrease in¹⁴C particulate counts in the dark period, ranged from 3.4 to 21.2% of daylight net photosynthesis. In almost all cases, parallel experiments with additions of radioactive glucose or amino acids indicated that the majority of active heterotrophs passed through 3m filters. Apparent residence times for glucose and amino acids were 20 to 168 hours and 20 to 152 hours, respectively.     

Cytoplasmic effects on the tissue culture response of wheat (Triticum aestivum) callus

Summary Calli were initiated from immature embryos of eight lines of hexaploid wheat (Triticum aestivum L. em. Thell) with different cytoplasms, the euplasmic nuclear donor Chinese Spring and seven alloplasmic lines derived from wild relative species of the genera Triticum and Aegilops. The calli were found to differ in their initial growth rates, their sensitivity to 2,4-D and their ability to organise shoot primordia, demonstrating that the cytoplasm can significantly affect the behaviour of tissues in culture. The potential for improving the responses of tissues in culture by cytoplasmic changes is noted.     

Grain set failure in boron deficient wheat

Effects of boron (B) deficiency on reproductive development and grain set in wheat was studied in experiments in a sand culture in which grain set was increased by increasing B supply in the nutrient solution. Early vegetative response was also studied in a solution culture experiment with 5 M B and without added B. Effects of B deficiency on the male and female part of the wheat flower were studied in a cross fertilization experiment involving B deficient and B sufficient wheat plants. An international trial (the Boron Probe Nursery) was conducted as a collaboration between Chiang Mai University, CIMMYT and National Agricultural Research Systems in various countries, to verify the B response in non-traditional, warm wheat-growing areas.There was a wide genotypic variation in reproductive responses to B among the eight wheat genotypes studied. In sand culture with low B (0.2 M), grain set index ranged from 9.5% in SW41 to 94.5% in Fang 60; with high B (10 M) it was 90% in all genotypes. Early vegetative response to B was measured in the length of the youngest emerged blade at 12 days after sowing. Without added B the length of the leaf blade relative to that with 5 M B ranged from 0.82 to 0.92. This indicates some variation in vegetative response to B among the genotpes. However, there was no relationship between vegetative and reproductive responses to B of the wheat genotypes.Fertility of both the male and female part of the wheat flower appears to be affected by B deficiency. Ears from B deficient plants that were bagged to prevent cross fertilization set no grain. Cross pollination of B deficient female flowers with pollen from B sufficient plants resulted in only 28% grain set, compared with 94% percent from manual crossing of B sufficient pollen on B sufficient female.Reponses to B application of SW41 and other sensitive genotypes at field sites of the first international Boron Probe Nursery (1990/91) confirmed that B deficiency can be a major cause of grain set failure in wheat in warm areas.